View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3781_low_17 (Length: 356)
Name: NF3781_low_17
Description: NF3781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3781_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 336
Target Start/End: Original strand, 30077357 - 30077688
Alignment:
| Q |
1 |
gggtagtaagaataatctcactcccatgaactacactaatgtcgctatagtggtgttagacaaagtttttgtacaacaa-taaacgaacaatttcataaa |
99 |
Q |
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| T |
30077357 |
gggtagtaagaataatctcactcccatgaactacactaatgtcgctatagtggtgttagacaaaaaatttgtacaacaaataaacgaacaatttcataaa |
30077456 |
T |
|
| Q |
100 |
gtagaaaacaacatttacttgaattgaattgatcttatatatgaaatactaatcaacacatccctatgaaaaattacatataattaaacacctaacacta |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30077457 |
gtagaaaacaacatttacttgaattgaattgatcttatatatgaaatactaatcaacacatccctatgaaaaattacatataattaaacacctaacacta |
30077556 |
T |
|
| Q |
200 |
acaannnnnnnnccttcccatttcccttgcatatataaaaccaaatagaaatatcattcttccccatattaaacctaatcattaaaatattaccctagtt |
299 |
Q |
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|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30077557 |
acaa-tttttttccttcccatt---cttgcatatataaaaccaaatagaaatatcattcttccccatattaaacctaatcattaaaatattaccctagtt |
30077652 |
T |
|
| Q |
300 |
tgatctctaactaaaataattctcaacaagactatat |
336 |
Q |
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||||||||||||||||||||||||||| ||||||||| |
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| T |
30077653 |
tgatctctaactaaaataattctcaac-agactatat |
30077688 |
T |
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