View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3783_high_8 (Length: 245)
Name: NF3783_high_8
Description: NF3783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3783_high_8 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 30087872 - 30088006
Alignment:
| Q |
104 |
agttacctgaagtccgaagcagacaactcgatagtaagctgagagtactaaccaagaaactaacataatttgttactatttgtctatataaaaaacaata |
203 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
30087872 |
agttacctgaagtccgaagcaaacaactcgatagtaagctgagagtactaaccaagaaactaacataatttgttactatttgtctatgtaaaaaacaata |
30087971 |
T |
 |
| Q |
204 |
aaaata--acagttacctgcaacagttgatgatgt |
236 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |
|
|
| T |
30087972 |
aaaataacacagttacctgcaacagttgatgatgt |
30088006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 13077578 - 13077681
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
13077578 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcagttgatttcta |
13077677 |
T |
 |
| Q |
101 |
tcaa |
104 |
Q |
| |
|
|||| |
|
|
| T |
13077678 |
tcaa |
13077681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13078639 - 13078741
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
13078639 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattattccgtaatcaaagggattttccctattttattcttctatatcagttgatttcta |
13078738 |
T |
 |
| Q |
101 |
tca |
103 |
Q |
| |
|
||| |
|
|
| T |
13078739 |
tca |
13078741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 30091852 - 30091898
Alignment:
| Q |
104 |
agttacctgaagtccgaagcagacaactcga-tagtaagctgagagt |
149 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
30091852 |
agttacctgaagtccgaagcagacagctcgattagtaagctgagagt |
30091898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 96; Significance: 3e-47; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 39984906 - 39984803
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
39984906 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcagttgatttcta |
39984807 |
T |
 |
| Q |
101 |
tcaa |
104 |
Q |
| |
|
|||| |
|
|
| T |
39984806 |
tcaa |
39984803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 5 - 104
Target Start/End: Complemental strand, 39983841 - 39983742
Alignment:
| Q |
5 |
ggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttctatcaa |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
39983841 |
ggcaatagggaggtgcagaccctcgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcagttgatttctatcaa |
39983742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 41968289 - 41968188
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
41968289 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattat-ctgtaatcaaagggattttccctattttattcttctatatcagttggtttcta |
41968191 |
T |
 |
| Q |
101 |
tca |
103 |
Q |
| |
|
||| |
|
|
| T |
41968190 |
tca |
41968188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14414244 - 14414340
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttct |
99 |
Q |
| |
|
|||||| | |||||| ||||||||||| |||||||||| |||| |||||||| |||| ||||| |||||||| ||||||| ||||||||| ||||| |
|
|
| T |
14414244 |
ttttgggattagggacgtgcagaccctagaagttctgccatatcattctgtaaacaaa--gatttcccctatttccttcttctatatcagttggtttct |
14414340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 14684604 - 14684707
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
14684604 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcagttgatttcta |
14684703 |
T |
 |
| Q |
101 |
tcaa |
104 |
Q |
| |
|
|||| |
|
|
| T |
14684704 |
tcaa |
14684707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21306460 - 21306563
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
21306460 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcagttgatttcta |
21306559 |
T |
 |
| Q |
101 |
tcaa |
104 |
Q |
| |
|
|||| |
|
|
| T |
21306560 |
tcaa |
21306563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 14685665 - 14685767
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
14685665 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcagttgatttcta |
14685764 |
T |
 |
| Q |
101 |
tca |
103 |
Q |
| |
|
||| |
|
|
| T |
14685765 |
tca |
14685767 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 21307517 - 21307619
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
21307517 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcagttgatttcta |
21307616 |
T |
 |
| Q |
101 |
tca |
103 |
Q |
| |
|
||| |
|
|
| T |
21307617 |
tca |
21307619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 30246506 - 30246608
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
30246506 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcagttgatttcta |
30246605 |
T |
 |
| Q |
101 |
tca |
103 |
Q |
| |
|
||| |
|
|
| T |
30246606 |
tca |
30246608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40421428 - 40421531
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
40421428 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattactctgtaatcaaagggattttccctattttattcttctatatcagttgatttcta |
40421527 |
T |
 |
| Q |
101 |
tcaa |
104 |
Q |
| |
|
|||| |
|
|
| T |
40421528 |
tcaa |
40421531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 4517345 - 4517243
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4517345 |
ttttggcaatagggaggtgcagaccctcgatgttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcagttgatttcta |
4517246 |
T |
 |
| Q |
101 |
tca |
103 |
Q |
| |
|
||| |
|
|
| T |
4517245 |
tca |
4517243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 40422487 - 40422589
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
40422487 |
ttttggcaatagggaggtgcagacccttgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcagttgatttcta |
40422586 |
T |
 |
| Q |
101 |
tca |
103 |
Q |
| |
|
||| |
|
|
| T |
40422587 |
tca |
40422589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8090143 - 8090040
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
8090143 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcagttgatttcta |
8090044 |
T |
 |
| Q |
101 |
tcaa |
104 |
Q |
| |
|
|||| |
|
|
| T |
8090043 |
tcaa |
8090040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 48907403 - 48907301
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
48907403 |
ttttggtaatagggaggtgcagaccctcgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcaattgatttcta |
48907304 |
T |
 |
| Q |
101 |
tca |
103 |
Q |
| |
|
||| |
|
|
| T |
48907303 |
tca |
48907301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 27962719 - 27962617
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
27962719 |
ttttggcattagggaggtgcagacccttgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcagttggtttcta |
27962620 |
T |
 |
| Q |
101 |
tca |
103 |
Q |
| |
|
||| |
|
|
| T |
27962619 |
tca |
27962617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 172962 - 172880
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttct |
83 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
172962 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttct |
172880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 45036265 - 45036163
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
45036265 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattattctgtaatcaaaggaattttccctattttattcttctatatcagttgatttcta |
45036166 |
T |
 |
| Q |
101 |
tca |
103 |
Q |
| |
|
||| |
|
|
| T |
45036165 |
tca |
45036163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 6540675 - 6540576
Alignment:
| Q |
4 |
tggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttctatca |
103 |
Q |
| |
|
||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
6540675 |
tggcattagggaggtgcagacccttgaagttctgcaatattattctgtaatcaaagggattttccctattttattcttctatatcagttggtttctatca |
6540576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13255613 - 13255714
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||| ||| || | ||||||||||| ||||||||| |||||| |
|
|
| T |
13255613 |
ttttggcaatagggaggtgcagacccttgaagttctgcaatattattctgtaatcaaa-ggaatttaccaaatttattcttctatatcagttggtttcta |
13255711 |
T |
 |
| Q |
101 |
tca |
103 |
Q |
| |
|
||| |
|
|
| T |
13255712 |
tca |
13255714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 54938931 - 54938828
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
54938931 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattattcagtaatcaaagggattttccctattttattcttctatatcagttggtttcta |
54938832 |
T |
 |
| Q |
101 |
tcaa |
104 |
Q |
| |
|
|||| |
|
|
| T |
54938831 |
tcaa |
54938828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 54937890 - 54937788
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttcta |
100 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
54937890 |
ttttagcaatagggaggtgcagaccctcgaagttctgcaatattattcagtaatcaaagggattttccctattttattcttctatatcagttggtttcta |
54937791 |
T |
 |
| Q |
101 |
tca |
103 |
Q |
| |
|
||| |
|
|
| T |
54937790 |
tca |
54937788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 28889845 - 28889748
Alignment:
| Q |
1 |
ttttggcaatagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattcttctgtatcagttgatttc |
98 |
Q |
| |
|
|||||||| ||||||| ||||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||||| |||||||| ||||||||| |||| |
|
|
| T |
28889845 |
ttttggcattagggagttgcagaccctcaaagttctgcgatattattctgtaatcaaatggattttccctatttcattcttctatatcagttggtttc |
28889748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 5033221 - 5033290
Alignment:
| Q |
9 |
atagggaggtgcagaccctcgaagttctgcaatattcttctgtaatcaaagggattttccctattttattct |
80 |
Q |
| |
|
||||||||||||||| |||| |||||||| || || ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5033221 |
atagggaggtgcagagcctcaaagttctgtgatgtt-ttctgtaatcaaaggga-tttccctattttattct |
5033290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University