View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3784_high_16 (Length: 236)
Name: NF3784_high_16
Description: NF3784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3784_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 44984746 - 44984966
Alignment:
| Q |
1 |
taacccttgactaatcaaattgcagtaatagatggtgataattcaatatagataccttgtcgaactccagttgccttatcccttaaaagaacaacctcga |
100 |
Q |
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| T |
44984746 |
taacccttgactaatcaaattgcagtaatagatggtgataattcaatatagataccttgtcgaactccagttgccttatcccttaaaagaacaacctcga |
44984845 |
T |
|
| Q |
101 |
caatagttccataaccttggaacacaaggcggacctggttataaaataaaaatacaaaatgaaatgagaaagaggagcaagagcacatccaacggcccgg |
200 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
44984846 |
caatagttccatatccttggaacacaaggcggacctggttataaaataaaaatacaaaatgaaatgagaaagaggagcaagagcacatccaacggaccgg |
44984945 |
T |
|
| Q |
201 |
gaacctaagcaatgtggttat |
221 |
Q |
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||||||||||||||||||||| |
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| T |
44984946 |
gaacctaagcaatgtggttat |
44984966 |
T |
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