View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3784_low_1 (Length: 620)

Name: NF3784_low_1
Description: NF3784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3784_low_1
NF3784_low_1
[»] chr2 (18 HSPs)
chr2 (15-613)||(36799257-36799856)
chr2 (15-376)||(36270473-36270828)
chr2 (45-295)||(21329875-21330115)
chr2 (28-149)||(22183250-22183371)
chr2 (45-296)||(18796846-18797087)
chr2 (42-300)||(18822417-18822665)
chr2 (173-298)||(41661733-41661855)
chr2 (45-124)||(6991903-6991982)
chr2 (206-295)||(22791485-22791574)
chr2 (173-296)||(18620262-18620384)
chr2 (45-125)||(20978212-20978292)
chr2 (205-295)||(6991740-6991830)
chr2 (309-377)||(21329785-21329853)
chr2 (45-124)||(17241050-17241127)
chr2 (203-250)||(17241197-17241244)
chr2 (171-242)||(24249992-24250062)
chr2 (171-242)||(30174649-30174719)
chr2 (309-377)||(22791395-22791463)
[»] chr6 (30 HSPs)
chr6 (45-279)||(13358916-13359141)
chr6 (45-295)||(17684096-17684336)
chr6 (45-295)||(17691067-17691307)
chr6 (45-377)||(27296969-27297299)
chr6 (45-295)||(27380879-27381119)
chr6 (45-295)||(27471262-27471502)
chr6 (45-377)||(29309230-29309560)
chr6 (45-295)||(11652063-11652303)
chr6 (45-377)||(29316190-29316519)
chr6 (45-377)||(25536728-25537058)
chr6 (45-281)||(16559113-16559339)
chr6 (45-127)||(188763-188844)
chr6 (171-242)||(17120465-17120535)
chr6 (171-242)||(33317137-33317207)
chr6 (176-306)||(13194356-13194485)
chr6 (206-279)||(2669781-2669854)
chr6 (45-137)||(2669630-2669722)
chr6 (171-242)||(14074752-14074822)
chr6 (51-137)||(28172899-28172985)
chr6 (45-126)||(16394232-16394312)
chr6 (181-242)||(22560154-22560214)
chr6 (309-377)||(17690977-17691045)
chr6 (309-377)||(27380789-27380857)
chr6 (309-377)||(27471172-27471240)
chr6 (177-233)||(28173017-28173072)
chr6 (171-242)||(22859848-22859918)
chr6 (171-242)||(27508307-27508377)
chr6 (173-222)||(16394145-16394193)
chr6 (174-242)||(8613194-8613261)
chr6 (309-377)||(16559009-16559077)
[»] chr4 (46 HSPs)
chr4 (45-377)||(26963980-26964310)
chr4 (45-377)||(55613023-55613353)
chr4 (45-295)||(868937-869177)
chr4 (45-377)||(8858507-8858837)
chr4 (45-377)||(10620870-10621200)
chr4 (45-377)||(18262552-18262882)
chr4 (45-295)||(18269413-18269653)
chr4 (45-377)||(26970803-26971133)
chr4 (45-377)||(10627949-10628279)
chr4 (45-295)||(19926387-19926627)
chr4 (46-295)||(4426242-4426482)
chr4 (45-306)||(5667745-5667994)
chr4 (45-295)||(5707660-5707900)
chr4 (45-295)||(5714288-5714528)
chr4 (45-295)||(28392761-28393001)
chr4 (45-355)||(20311629-20311935)
chr4 (173-297)||(35224019-35224142)
chr4 (45-377)||(8845543-8845873)
chr4 (28-141)||(32646575-32646688)
chr4 (171-242)||(1941996-1942066)
chr4 (171-242)||(4546334-4546404)
chr4 (171-242)||(34975823-34975893)
chr4 (176-294)||(24701464-24701581)
chr4 (171-242)||(3368983-3369053)
chr4 (45-124)||(10677371-10677449)
chr4 (45-124)||(10891011-10891089)
chr4 (165-242)||(5616661-5616737)
chr4 (49-138)||(24701345-24701434)
chr4 (174-242)||(9487826-9487893)
chr4 (309-377)||(19926297-19926365)
chr4 (171-242)||(2677285-2677355)
chr4 (171-242)||(4675943-4676013)
chr4 (171-242)||(15461769-15461839)
chr4 (171-242)||(15815293-15815363)
chr4 (171-242)||(18111003-18111073)
chr4 (171-242)||(18163434-18163504)
chr4 (309-376)||(18269675-18269742)
chr4 (171-242)||(20244209-20244279)
chr4 (171-242)||(26531885-26531955)
chr4 (45-124)||(35223900-35223978)
chr4 (80-130)||(1941914-1941963)
chr4 (173-295)||(10677210-10677331)
chr4 (173-295)||(10890850-10890971)
chr4 (77-130)||(4546267-4546319)
chr4 (171-251)||(9538230-9538309)
chr4 (309-377)||(28392671-28392739)
[»] chr3 (48 HSPs)
chr3 (45-377)||(15357123-15357453)
chr3 (45-295)||(16482110-16482350)
chr3 (45-377)||(17780655-17780985)
chr3 (45-295)||(6110404-6110644)
chr3 (45-295)||(8490835-8491075)
chr3 (45-295)||(10572219-10572459)
chr3 (45-295)||(13248947-13249187)
chr3 (45-295)||(15600511-15600751)
chr3 (45-295)||(15607056-15607296)
chr3 (45-295)||(10578983-10579222)
chr3 (45-295)||(13211642-13211882)
chr3 (45-295)||(15341846-15342086)
chr3 (45-295)||(32056526-32056766)
chr3 (45-377)||(18520315-18520645)
chr3 (45-263)||(18523003-18523211)
chr3 (173-377)||(13517266-13517477)
chr3 (45-295)||(17199811-17200051)
chr3 (45-280)||(17136693-17136918)
chr3 (15-128)||(9504618-9504731)
chr3 (173-296)||(29974583-29974706)
chr3 (173-296)||(29925430-29925552)
chr3 (45-295)||(1647148-1647388)
chr3 (45-126)||(16200770-16200850)
chr3 (174-377)||(1647058-1647268)
chr3 (171-251)||(14890663-14890742)
chr3 (171-227)||(25978703-25978758)
chr3 (173-300)||(9504768-9504894)
chr3 (171-242)||(11787859-11787929)
chr3 (171-242)||(12300182-12300252)
chr3 (171-242)||(21034510-21034580)
chr3 (171-242)||(28088378-28088448)
chr3 (173-242)||(15537809-15537877)
chr3 (45-114)||(29925311-29925379)
chr3 (45-114)||(29974464-29974532)
chr3 (309-377)||(10572129-10572197)
chr3 (309-377)||(10578893-10578961)
chr3 (309-377)||(16482020-16482088)
chr3 (171-242)||(20147514-20147584)
chr3 (171-242)||(21399064-21399134)
chr3 (171-242)||(55427293-55427363)
chr3 (307-377)||(23014897-23014967)
chr3 (80-130)||(25978791-25978840)
chr3 (309-370)||(8491097-8491158)
chr3 (309-377)||(6110666-6110734)
chr3 (309-377)||(13211904-13211972)
chr3 (309-377)||(15341756-15341824)
chr3 (309-377)||(15600421-15600489)
chr3 (309-377)||(15606966-15607034)
[»] scaffold0390 (4 HSPs)
scaffold0390 (45-280)||(13592-13817)
scaffold0390 (45-295)||(6561-6801)
scaffold0390 (309-377)||(6471-6539)
scaffold0390 (309-377)||(13487-13555)
[»] scaffold0234 (4 HSPs)
scaffold0234 (45-295)||(1948-2188)
scaffold0234 (45-295)||(10839-11079)
scaffold0234 (309-377)||(1858-1926)
scaffold0234 (309-377)||(10749-10817)
[»] chr8 (24 HSPs)
chr8 (45-377)||(6094463-6094793)
chr8 (45-281)||(15326538-15326764)
chr8 (45-281)||(15506907-15507133)
chr8 (45-295)||(21941005-21941245)
chr8 (45-295)||(22171827-22172066)
chr8 (51-295)||(28548393-28548627)
chr8 (45-275)||(24642988-24643208)
chr8 (15-137)||(14983699-14983821)
chr8 (171-242)||(22659454-22659524)
chr8 (171-242)||(6431158-6431228)
chr8 (191-241)||(8781836-8781885)
chr8 (45-84)||(2375347-2375386)
chr8 (171-242)||(2962892-2962962)
chr8 (171-242)||(22130569-22130639)
chr8 (171-242)||(27007477-27007547)
chr8 (171-242)||(27014620-27014690)
chr8 (171-242)||(27880447-27880517)
chr8 (171-242)||(28020628-28020698)
chr8 (174-248)||(24796675-24796748)
chr8 (171-252)||(8371203-8371283)
chr8 (15-140)||(38232152-38232277)
chr8 (309-377)||(15326800-15326868)
chr8 (309-377)||(15507169-15507237)
chr8 (309-377)||(21941267-21941335)
[»] chr7 (30 HSPs)
chr7 (45-295)||(12738876-12739116)
chr7 (45-377)||(15152783-15153113)
chr7 (173-377)||(11542517-11542728)
chr7 (45-377)||(29328124-29328454)
chr7 (45-295)||(11535689-11535929)
chr7 (45-295)||(12751166-12751406)
chr7 (28-297)||(2365242-2365502)
chr7 (45-296)||(13392490-13392731)
chr7 (173-295)||(18561457-18561578)
chr7 (171-242)||(34128845-34128915)
chr7 (171-242)||(41680928-41680998)
chr7 (171-242)||(18139298-18139368)
chr7 (173-252)||(18257515-18257593)
chr7 (171-242)||(47166819-47166889)
chr7 (171-242)||(10668861-10668931)
chr7 (171-242)||(28130833-28130903)
chr7 (309-377)||(11535599-11535667)
chr7 (171-235)||(14592123-14592186)
chr7 (171-242)||(2204824-2204894)
chr7 (171-242)||(8465271-8465341)
chr7 (171-242)||(18400376-18400446)
chr7 (171-242)||(18407360-18407430)
chr7 (171-242)||(30254410-30254480)
chr7 (171-242)||(48808456-48808526)
chr7 (45-119)||(11542774-11542847)
chr7 (180-233)||(7396676-7396728)
chr7 (309-377)||(12751428-12751496)
chr7 (80-140)||(18257618-18257677)
chr7 (80-128)||(34128763-34128810)
chr7 (80-128)||(47166924-47166971)
[»] chr1 (27 HSPs)
chr1 (45-377)||(18252370-18252700)
chr1 (45-295)||(18532141-18532381)
chr1 (15-377)||(12013826-12014184)
chr1 (45-295)||(27131037-27131276)
chr1 (45-295)||(16358662-16358902)
chr1 (45-149)||(9916541-9916646)
chr1 (45-295)||(27310204-27310444)
chr1 (173-296)||(27277184-27277306)
chr1 (45-296)||(22641500-22641741)
chr1 (28-129)||(12006329-12006430)
chr1 (203-377)||(31234461-31234640)
chr1 (173-295)||(3855546-3855667)
chr1 (171-242)||(20391199-20391269)
chr1 (45-124)||(27277347-27277425)
chr1 (171-242)||(47667445-47667515)
chr1 (316-365)||(35132466-35132515)
chr1 (309-377)||(18532051-18532119)
chr1 (173-233)||(36816323-36816382)
chr1 (171-242)||(9456388-9456458)
chr1 (171-242)||(20779605-20779675)
chr1 (171-242)||(22670217-22670287)
chr1 (171-242)||(28134683-28134753)
chr1 (171-242)||(42816949-42817019)
chr1 (171-242)||(43802325-43802395)
chr1 (61-115)||(36816432-36816486)
chr1 (45-114)||(3855718-3855786)
chr1 (309-377)||(27310114-27310182)
[»] chr5 (34 HSPs)
chr5 (28-376)||(17298441-17298786)
chr5 (45-377)||(19714035-19714365)
chr5 (45-249)||(24695139-24695333)
chr5 (49-297)||(17285375-17285614)
chr5 (173-281)||(19706860-19706967)
chr5 (176-376)||(17282996-17283201)
chr5 (173-377)||(39539007-39539218)
chr5 (173-294)||(28719383-28719503)
chr5 (173-249)||(24701903-24701978)
chr5 (173-234)||(27347224-27347284)
chr5 (15-137)||(18806452-18806574)
chr5 (15-137)||(18806632-18806754)
chr5 (15-137)||(18806812-18806934)
chr5 (421-487)||(30807597-30807667)
chr5 (171-242)||(9811693-9811763)
chr5 (171-242)||(12703834-12703904)
chr5 (171-242)||(12764950-12765020)
chr5 (174-242)||(7865390-7865457)
chr5 (221-297)||(17314602-17314678)
chr5 (45-137)||(18829340-18829431)
chr5 (309-377)||(24694995-24695063)
chr5 (309-377)||(24701759-24701827)
chr5 (171-242)||(32171-32241)
chr5 (171-242)||(12789623-12789693)
chr5 (49-124)||(18569650-18569724)
chr5 (173-228)||(20100217-20100271)
chr5 (171-242)||(20941299-20941369)
chr5 (171-242)||(22941522-22941592)
chr5 (171-242)||(23546194-23546264)
chr5 (171-242)||(24933266-24933336)
chr5 (171-242)||(25805345-25805415)
chr5 (171-242)||(31097088-31097158)
chr5 (45-115)||(27347333-27347402)
chr5 (309-377)||(19706756-19706824)
[»] scaffold0433 (2 HSPs)
scaffold0433 (45-295)||(7447-7687)
scaffold0433 (316-377)||(7716-7777)
[»] scaffold0220 (1 HSPs)
scaffold0220 (45-280)||(18628-18852)
[»] scaffold0186 (2 HSPs)
scaffold0186 (45-296)||(25616-25857)
scaffold0186 (309-377)||(25527-25595)
[»] scaffold0008 (1 HSPs)
scaffold0008 (45-377)||(229928-230258)
[»] scaffold0063 (1 HSPs)
scaffold0063 (173-281)||(5981-6088)
[»] scaffold0160 (1 HSPs)
scaffold0160 (176-376)||(24237-24441)
[»] scaffold0657 (1 HSPs)
scaffold0657 (45-126)||(1333-1413)
[»] scaffold0006 (1 HSPs)
scaffold0006 (171-242)||(67334-67404)
[»] scaffold0112 (1 HSPs)
scaffold0112 (171-252)||(455-535)
[»] scaffold0376 (1 HSPs)
scaffold0376 (171-242)||(11486-11556)
[»] scaffold0297 (1 HSPs)
scaffold0297 (171-242)||(258-328)
[»] scaffold0264 (1 HSPs)
scaffold0264 (171-242)||(3635-3705)
[»] scaffold0111 (1 HSPs)
scaffold0111 (171-242)||(26814-26884)
[»] scaffold0028 (1 HSPs)
scaffold0028 (171-242)||(120002-120072)
[»] scaffold0039 (1 HSPs)
scaffold0039 (255-296)||(88282-88323)
[»] scaffold0086 (1 HSPs)
scaffold0086 (171-235)||(54036-54099)


Alignment Details
Target: chr2 (Bit Score: 560; Significance: 0; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 560; E-Value: 0
Query Start/End: Original strand, 15 - 613
Target Start/End: Complemental strand, 36799856 - 36799257
Alignment:
Q  15 acatagaacattttgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagt 114  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36799856 acatagaacattttgtaaaagtcacaagtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagt 36799757  T
Q  115 caagtactttgttgccgtacaaacgtcgttcgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatg 214  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36799756 caagtactttgttgccgtacaaacgccgtccgtaagaacgtaataggaggactattacgttggttgatgggtactcgacgaatcatgtttgagggacatg 36799657  T
Q  215 agtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatattaggccttattataga 314  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36799656 agtgacctagatggaatttgtacctcctaaataacagaagaaatgtctaagggtccaatattgaacttgaaaagggtgacatattaggccttattataga 36799557  T
Q  315 tatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcacaaaaaattagaagcaagatacactgaaaacctgaaacc 414  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36799556 tatgagggcaaaaggataataatgcacaagatctttatcacataaatgtttcgtcagatcacaaaaaattagaagcaagatacagtgaaaacctgaaacc 36799457  T
Q  415 acttttagaagccctagatttctgaaaccctaaaaccctttctctctaagccttcatctcgtagcagctagcatt-tgagtggaggagactgttcatgca 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  36799456 acttttagaagccctagatttctgaaaccctaaaaccctttctctctaagccttcatctcgtagcagctagcattgtgagtggaggagactgttcatgta 36799357  T
Q  514 gactgagtagaggcgttgccgattgagtggtacttgtgatagattacataaatccgacttcaaaggttctgcgctacaagaggtaatgattcgatctctg 613  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36799356 gactgagtagaggcgttgccgattgagtggtacttgtgatagattacataaatccgacttcaaaggttctgcgctacaagaggtaatgattcgatctctg 36799257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 15 - 376
Target Start/End: Original strand, 36270473 - 36270828
Alignment:
Q  15 acatagaacattttgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagt 114  Q
    |||||||| ||| |||||| |||||| |||||||||||||||||||||||||||||| ||| || ||||| ||||||| |||| ||||||||||| ||||    
T  36270473 acatagaaaattatgtaaaggtcacaagtcattctcatagtgataagtggtgtattc-acccttcgacctaaaaccaccatgcaccctagatgtatgagt 36270571  T
Q  115 caagtactttgttgccgtacaaacgtcgttcgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatg 214  Q
    | | ||||||||||||||||||| ||||||        ||||| |||| |||| | | || ||||| ||||||||| | ||||||||  |||||||||      
T  36270572 cgaatactttgttgccgtacaaaagtcgtt--------cgtaacaggatgactataaagtcggttgttgggtactcaatgaatcatg-ctgagggacaca 36270662  T
Q  215 agtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatattaggcctt------at 308  Q
    ||||| |||||| ||||||||  |||||| |||||||| |||||||||||||| | ||||||||||| || |||| ||| ||| || |||||      |     
T  36270663 agtgatctagattgaatttgtctctcctatataacaga-gaaatgtctaagggccgaatattgaactggataaggatgatatactatgccttgtgttcaa 36270761  T
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcac 376  Q
    |||||| ||||||| |||| | |||  || |||||||||||||||  ||||| |||| ||||||||||    
T  36270762 tatagacatgagggaaaaagggtaactatacacaagatctttatcgtataaaggttt-gtcagatcac 36270828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 21330115 - 21329875
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  21330115 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 21330017  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | || |||||||||| |||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  21330016 cgtaaca--------ggatgactataaagtaggttgatggggactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 21329926  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  21329925 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 21329875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 22183371 - 22183250
Alignment:
Q  28 tgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgtt 127  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||   ||  | || |||||||||||| |||||||||||    
T  22183371 tgtaaaagtcacaggtcattctcatagtgataagtggtgtattccaccctttgacctgaaaccaacgtgtactcttgatgtaggagtcgagtactttgtt 22183272  T
Q  128 gccgtacaaacgtcgttcgtaa 149  Q
    |  |||||||||| ||| ||||    
T  22183271 gttgtacaaacgttgtttgtaa 22183250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 45 - 296
Target Start/End: Original strand, 18796846 - 18797087
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||  ||||||||||| ||| || |||||||||||||||||  ||||| |||| |||||| ||| ||||||  || | ||||||| ||     
T  18796846 attctcatagtgatg-gtggtgtattccacccttcgacctgaaaccactatgtaccctaaatgttggagtcgagtgctttgtcaccattcaaacgttgt- 18796943  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
           |||||| |||| |||| | | ||| |||||||||||| | | |||||||||| ||||||||||||||||||||||| |||||   |||||||     
T  18796944 -------acgtaacaggatgactataaagtttgttgatgggtacaccatgaatcatgtt-gagggacatgagtgacctagatgaaattttcccctcctac 18797035  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacat 296  Q
    |||| ||  |||||||||| ||| ||||||||||||| || |||| ||||||    
T  18797036 ataataggagaaatgtctacgggcccaatattgaactagacaaggatgacat 18797087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 42 - 300
Target Start/End: Original strand, 18822417 - 18822665
Alignment:
Q  42 gtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtc 141  Q
    ||||||||||||  |||||||||||||||| ||| || |||||||||||||| ||  |||||||||||||||||||||||||| ||| | || |||||||    
T  18822417 gtcattctcatatagataagtggtgtattccacccttcgacctgaaaccactgtgtaccctagatgtaggagtcaagtacttttttgtcatataaacgtc 18822516  T
Q  142 gttcgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcc 241  Q
     | |||   |||  |||     |||| | | ||||||| ||||||||| | |||||||||  ||||||||| | |||||||||||| | |||   | |||    
T  18822517 atccgt---aacacaat-----gactataaagttggttaatgggtacttggcgaatcatg-atgagggacacgggtgacctagatgaatttttctcgtcc 18822607  T
Q  242 taaataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatatta 300  Q
    || |||||| | ||||||| |||||| ||||| ||||||| || |||||||||||||||    
T  18822608 tacataacataagaaatgtttaaggg-ccaattttgaactggacaagggtgacatatta 18822665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 173 - 298
Target Start/End: Original strand, 41661733 - 41661855
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    |||||||||||||||||| | ||| |||||| |||||||||||||||||||||| | |||||| ||||||| |||||||  ||||||||| | || ||||    
T  41661733 gttggttgatgggtactccatgaaacatgtt-gagggacatgagtgacctagatag-atttgtccctcctacataacaggagaaatgtct-acggcccaa 41661829  T
Q  273 tattgaacttgaaaagggtgacatat 298  Q
    |||||||||  | |||||||||||||    
T  41661830 tattgaactgaacaagggtgacatat 41661855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 6991982 - 6991903
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtacttt 124  Q
    ||||||||||||||||||||||||||| ||| || | ||||||| |||||||  ||||||||||||||||| ||||||||    
T  6991982 attctcatagtgataagtggtgtattccacccttcggcctgaaatcactatgttccctagatgtaggagtcgagtacttt 6991903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 22791574 - 22791485
Alignment:
Q  206 agggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||  ||| |||||| ||| ||||||||||||| || |||| |||||    
T  22791574 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaattgtctacgggaccaatattgaactagacaaggatgaca 22791485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 18620262 - 18620384
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    |||||||||||||||||| || ||||||| | || |||||||||||||| ||||  ||||||  ||||||| |||||||   ||||||||| ||| ||||    
T  18620262 gttggttgatgggtactccactaatcatgct-gatggacatgagtgacccagatataatttggtcctcctacataacaggataaatgtctacgggcccaa 18620360  T
Q  273 tattgaacttgaaaagggtgacat 296  Q
    |||| ||||  | |||||||||||    
T  18620361 tattaaactgaacaagggtgacat 18620384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 20978212 - 20978292
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttg 125  Q
    |||||| |||||||||||||||||||| ||  |||||| ||| || ||||||  |||||||||||||| || |||||||||    
T  20978212 attctcgtagtgataagtggtgtattccactctttgacatgacactactatgtaccctagatgtaggattcgagtactttg 20978292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 6991830 - 6991740
Alignment:
Q  205 gagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    ||||||||||||||||||||||||||||| | |||| || |||| |  |||||||||||| |   || ||||||||| || ||||||||||    
T  6991830 gagggacatgagtgacctagatggaatttatccctcttacataataatggaaatgtctaaagtctcactattgaactggacaagggtgaca 6991740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 21329853 - 21329785
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  21329853 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 21329785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 17241050 - 17241127
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtacttt 124  Q
    |||||||||||||||| |||||||||  ||| || ||||| |||||||||||  |  |||||||||||||||||||||||    
T  17241050 attctcatagtgataa-tggtgtatttcacc-ttcgacctaaaaccactatgtactgtagatgtaggagtcaagtacttt 17241127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 17241197 - 17241244
Alignment:
Q  203 ttgagggacatgagtgacctagatggaatttgtacctcctaaataaca 250  Q
    ||||||||||||||||||||||||| ||||||| || |||| ||||||    
T  17241197 ttgagggacatgagtgacctagatgaaatttgtcccacctacataaca 17241244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 24250062 - 24249992
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  24250062 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 24249992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 30174649 - 30174719
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  30174649 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 30174719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 22791463 - 22791395
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||  ||| ||||||||||||||||    
T  22791463 tatagacatgagggcaaaagggtaattatacacatgatcattatcactgaaaggtttcgtcagatcaca 22791395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 8e-41; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 45 - 279
Target Start/End: Complemental strand, 13359141 - 13358916
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||||||||||||||| ||| || |||||||||||||||||  || |||||||||||||| |||| ||||||||||||||||| ||||     
T  13359141 attctcatagtgataagtggtgtattccacccttcgacctgaaaccactatgtaccttagatgtaggagtcgagtattttgttgccgtacaaacatcgt- 13359043  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
            ||||| |||| |||| | | || |||||||||  | || ||||||||||  |||||||||||||||||||| ||||||||||| |||||||     
T  13359042 -------ccgtaacaggatgactataaagtcggttgatggacattcaacgaatcatg-gtgagggacatgagtgacctatatggaatttgtccctcctac 13358951  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaa 279  Q
    |||||||  |||  |||||||||||||||||||||    
T  13358950 ataacagtagaatcgtctaagggtccaatattgaa 13358916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 17684336 - 17684096
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  17684336 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 17684238  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  17684237 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 17684147  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  17684146 ataacaggagaaatgtctatgggcccaatattgaactagacaaggatgaca 17684096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 17691307 - 17691067
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  17691307 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 17691209  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  17691208 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 17691118  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  17691117 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 17691067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 27296969 - 27297299
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  27296969 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 27297067  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | |||||| |||||||||||||||||||||||  |||||||     
T  27297068 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggatatgagtgacctagatggaatttgcccctcctac 27297158  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacata--ttaggcctt------attatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| ||||| |   || |||||      | |||||| |||||||||||| | |||| |    
T  27297159 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacagtctatgccttgtgttcaatatagacatgagggcaaaagggtaatta 27297258  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  27297259 tacacatgatcattatcacagaaaggtttcgtcagatcaca 27297299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 27381119 - 27380879
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  27381119 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 27381021  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  27381020 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 27380930  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  27380929 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 27380879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 27471502 - 27471262
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  27471502 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 27471404  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  27471403 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 27471313  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  27471312 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 27471262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 29309230 - 29309560
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| ||||||| || ||||||  || | ||||||| ||     
T  29309230 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcaggtgctttgtcaccattcaaacgttgtc 29309328  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  29309329 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 29309419  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatatt--aggccttat------tatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||   |  | ||||| |      |||||| |||||||||||| | |||| |    
T  29309420 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaatta 29309519  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  29309520 tacacatgatcattatcacagaaaggtttcgtcagatcaca 29309560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 11652063 - 11652303
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||| ||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  11652063 attctcataatgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 11652161  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  11652162 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 11652252  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  11652253 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 11652303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 29316190 - 29316519
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| ||||||| || ||||||  || | ||||||| ||     
T  29316190 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtca-gtgctttgtcaccattcaaacgttgtc 29316287  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  29316288 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 29316378  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatatt--aggccttat------tatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||   |  | ||||| |      |||||| |||||||||||| | |||| |    
T  29316379 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaatta 29316478  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  29316479 tacacatgatcattatcacagaaaggtttcgtcagatcaca 29316519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 45 - 377
Target Start/End: Complemental strand, 25537058 - 25536728
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||| | ||||||||||| ||| || ||||||||||||||||   |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  25537058 attctcatagtgaca-gtggtgtattccacccttcgacctgaaaccactatttaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 25536960  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| || | | | |||||||||||||||||| | |||| ||||| ||||||||||||||||||||||||||||||  |||||||     
T  25536959 cgtaaca--------ggatgattataaagttggttgatgggtactccatgaattatgtt-gagggacatgagtgacctagatggaatttgcccctcctac 25536869  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca--tattaggcctt------attatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| | | ||||||||||||| || |||| |||||     || |||||      | |||||| ||||||||||||||||||| |    
T  25536868 ataacaggagaaatgtctacgtgcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaaagataatta 25536769  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||| ||||||    
T  25536768 tacacatgatcattatcacagaaaggtttcgtcatatcaca 25536728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 45 - 281
Target Start/End: Complemental strand, 16559339 - 16559113
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || ||||||||||| |||||  || ||||||| |||||| |||  |||||  || | ||||||| ||     
T  16559339 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccgctatgtaccgtagatgttggagtcgagtgttttgtcaccattcaaacgttgtc 16559241  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | ||||||| | ||||||||||||||||||| |||||||||||  ||||||||    
T  16559240 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcat-tctgagggacatgagtgacctggatggaatttgcccctcctaa 16559150  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaact 281  Q
    |||||||  |||||||||| ||| |||||||||||||    
T  16559149 ataacaggagaaatgtctacgggcccaatattgaact 16559113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 188844 - 188763
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgtt 127  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| |||||||    
T  188844 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtt 188763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 17120535 - 17120465
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    |||||||||||||||| || || |||||||| | |||||||||||||| |||||||||||||||| ||||||    
T  17120535 acgttggttgatgggtgcttgatgaatcatgct-gagggacatgagtgtcctagatggaatttgtccctcct 17120465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 33317137 - 33317207
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| | |||||||||||||| ||||||||| |||||| ||||||    
T  33317137 acgttggttgatgggtacttgatgaatcatgct-gagggacatgagtgtcctagatgggatttgtccctcct 33317207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 176 - 306
Target Start/End: Original strand, 13194356 - 13194485
Alignment:
Q  176 ggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaatat 275  Q
    |||| |||||| |||||  ||||||||| ||||||||||||| |||||||||||||||   ||| ||| |||| ||  |||||||||||||   ||||||    
T  13194356 ggtttatgggtgctcgataaatcatgtt-gagggacatgagtaacctagatggaattttccccttctatataataggagaaatgtctaaggtctcaatat 13194454  T
Q  276 tgaacttgaaaagggtgacatattaggcctt 306  Q
    ||||||||  ||||| ||||| ||| |||||    
T  13194455 tgaacttggcaagggggacatgttatgcctt 13194485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 2669781 - 2669854
Alignment:
Q  206 agggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaatattgaa 279  Q
    ||||||||||||||||||||| ||||||   ||||||| ||||||   |||||||||||||| |||||||||||    
T  2669781 agggacatgagtgacctagattgaattttcccctcctacataacatgagaaatgtctaagggcccaatattgaa 2669854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 2669630 - 2669722
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaa 137  Q
    ||||||||||||| |||| |||||||| ||  |||||||||||| || ||||  | |||||||||||||||  ||||||||||| ||| ||||    
T  2669630 attctcatagtgacaagttgtgtattccactatttgacctgaaatcattatgtactctagatgtaggagtccggtactttgttgtcgttcaaa 2669722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 14074752 - 14074822
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| |  ||||||||||||| ||||||||| |||||| ||||||    
T  14074752 acgttggttgatgggtacttgatgaatcatgcta-agggacatgagtgtcctagatgggatttgtccctcct 14074822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 137
Target Start/End: Original strand, 28172899 - 28172985
Alignment:
Q  51 atagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaa 137  Q
    ||||||||||||||||||||| ||| || |||| ||||||| ||||  |||||||| |||||||||  ||||| |||| || |||||    
T  28172899 atagtgataagtggtgtattccacccttcgaccggaaaccagtatgtaccctagatataggagtcatatacttagttgtcgcacaaa 28172985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 16394312 - 16394232
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgt 126  Q
    ||||| ||||||||| ||||||||||| ||| |||||| |||||||||||||  |||||||||| ||| || ||| ||||||    
T  16394312 attcttatagtgata-gtggtgtattccaccctttgacttgaaaccactatgtaccctagatgttggaatcgagtgctttgt 16394232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 22560214 - 22560154
Alignment:
Q  181 atgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||| || |||||||||| |||||||||||||| ||||||||| |||||| ||||||    
T  22560214 atgggtacttgatgaatcatgtt-gagggacatgagtgtcctagatgggatttgtccctcct 22560154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 17691045 - 17690977
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  17691045 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 17690977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 27380857 - 27380789
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  27380857 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 27380789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 27471240 - 27471172
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  27471240 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 27471172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 28173017 - 28173072
Alignment:
Q  177 gttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaattt 233  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||  |||||||||||||    
T  28173017 gttgatgggtactcgacaaatcatg-ttgagtgacatgagtgttctagatggaattt 28173072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 22859918 - 22859848
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  22859918 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 22859848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 27508377 - 27508307
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  |||||| |||||||  ||||||||| |||||| ||||||    
T  27508377 acgttggttgatgggtacttgatgaatcatg-ctgaggggcatgagtatcctagatgggatttgtccctcct 27508307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 16394193 - 16394145
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacct 222  Q
    |||||||||||||||||| | ||||||||  |||||||||||||||||||    
T  16394193 gttggttgatgggtactccatgaatcatg-ctgagggacatgagtgacct 16394145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 8613194 - 8613261
Alignment:
Q  174 ttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    |||||||||||||||| || ||||||||  ||||||| ||||||| ||||||||  |||||| ||||||    
T  8613194 ttggttgatgggtacttgatgaatcatg-ctgagggatatgagtgtcctagatgtgatttgtccctcct 8613261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 16559077 - 16559009
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| |||  |||||||||||||||    
T  16559077 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaagatttcgtcagatcaca 16559009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 26963980 - 26964310
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  26963980 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 26964078  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  26964079 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 26964169  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacata--ttaggcctt------attatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| ||||| |   || |||||      | |||||| |||||||||||| | |||| |    
T  26964170 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacagtctatgccttgtgttcaatatagacatgagggcaaaagggtaatta 26964269  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  26964270 tacacatgatcattatcacagaaaggtttcgtcagatcaca 26964310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 55613023 - 55613353
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  55613023 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 55613121  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||  |||||||     
T  55613122 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgtt-gagggacatgagtgacctagatggaatttgcccctcctac 55613212  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatatt--aggccttat------tatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||   |  | ||||| |      |||||| |||||||||||| | |||| |    
T  55613213 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaatta 55613312  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  55613313 tacacatgatcattatcacagaaaggtttcgtcagatcaca 55613353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 868937 - 869177
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    |||||||||||||||| |||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  868937 attctcatagtgataa-tggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 869035  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  869036 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgctcctcctac 869126  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  869127 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 869177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 8858507 - 8858837
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  8858507 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 8858605  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  8858606 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 8858696  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatatt--aggccttat------tatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||   |  | ||||| |      |||||| |||||||||||| | |||| |    
T  8858697 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaatta 8858796  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  8858797 tacacatgatcattatcacagaaaggtttcgtcagatcaca 8858837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 377
Target Start/End: Complemental strand, 10621200 - 10620870
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||| ||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||| | ||     
T  10621200 attctcatagtgata-gtggtgttttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaactttgtc 10621102  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||  |||||||     
T  10621101 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgtt-gagggacatgagtgacctagatggaatttgcccctcctac 10621011  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca--tattaggccttat------tatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||     || |||||||      |||||| |||||||||||| | |||| |    
T  10621010 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgccttatgttcaatatagacatgagggcaaaagggtaatta 10620911  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  10620910 tacacatgatcattatcacagaaaggtttcgtcagatcaca 10620870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 18262552 - 18262882
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  18262552 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 18262650  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  18262651 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 18262741  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatatt--aggccttat------tatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||   |  | ||||| |      |||||| |||||||||||| | |||| |    
T  18262742 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaatta 18262841  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  18262842 tacacatgatcattatcacagaaaggtttcgtcagatcaca 18262882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 18269413 - 18269653
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  18269413 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 18269511  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  18269512 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 18269602  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  18269603 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 18269653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 26970803 - 26971133
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  26970803 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 26970901  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | |||| |||||||||||||||||||||||||  |||||||     
T  26970902 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gaggaacatgagtgacctagatggaatttgcccctcctac 26970992  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacata--ttaggcctt------attatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| ||||| |   || |||||      | |||||| |||||||||||| | |||| |    
T  26970993 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacagtctatgccttgtgttcaatatagacatgagggcaaaagggtaatta 26971092  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  26971093 tacacatgatcattatcacagaaaggtttcgtcagatcaca 26971133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 45 - 377
Target Start/End: Complemental strand, 10628279 - 10627949
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    |||||||||||||||| |||||| ||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||| | ||     
T  10628279 attctcatagtgataa-tggtgttttccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaactttgtc 10628181  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | ||||||||||  |||||||||||||||||||||||||||||  |||||||     
T  10628180 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgtta-agggacatgagtgacctagatggaatttgcccctcctac 10628090  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca--tattaggccttat------tatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||     || |||||||      |||||| |||||||||||| | |||| |    
T  10628089 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgccttatgttcaatatagacatgagggcaaaagggtaatta 10627990  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  10627989 tacacatgatcattatcacagaaaggtttcgtcagatcaca 10627949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 19926627 - 19926387
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  19926627 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 19926529  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  19926528 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 19926438  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  ||||| |||| ||| ||||||||||||| || |||| |||||    
T  19926437 ataacaggagaaatatctacgggcccaatattgaactagacaaggatgaca 19926387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 46 - 295
Target Start/End: Complemental strand, 4426482 - 4426242
Alignment:
Q  46 ttctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgttc 145  Q
    |||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||| || | ||||| | || |    
T  4426482 ttctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgttaccattcaaacattgtcc 4426384  T
Q  146 gtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaa 245  Q
    ||||        ||||| |||| | | |||||||||||||||||| | ||||||||||  ||||||||||||||| ||||||||||||   ||||||| |    
T  4426383 gtaa--------taggatgactataaagttggttgatgggtactccatgaatcatgttgaagggacatgagtgacatagatggaattttcccctcctaca 4426292  T
Q  246 taacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||   |||||||||| ||| ||||||||||||| || |||| |||||    
T  4426291 taacaagagaaatgtctatgggcccaatattgaactagacaaggatgaca 4426242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 306
Target Start/End: Complemental strand, 5667994 - 5667745
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |  ||| ||| ||||||  || | ||||||| ||     
T  5667994 attctcatagtgata-gtggtgtattccacccttagacctgaaaccactatgtaccctagatgttg--gtcgagtgctttgtcaccattcaaacgttgtc 5667898  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
     |||| ||        || |||| | | |||||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||||  |||||||     
T  5667897 tgtaacaa--------gatgactataaagttggttgatgggtactccacgaatcatg-ctgagggacatgactgacctagatggaatttgcccctcctac 5667807  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatattaggcctt 306  Q
    |||||||  ||||| |||| ||| |||||||||||||||| ||||||||||| ||| |||||    
T  5667806 ataacaggagaaatttctacgggcccaatattgaacttgagaagggtgacatgttatgcctt 5667745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 5707660 - 5707900
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| | | || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||| | ||     
T  5707660 attctcatagtgata-gtggtgtattccatccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaactttgtc 5707758  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  5707759 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 5707849  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  5707850 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 5707900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 5714288 - 5714528
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| | | || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||| | ||     
T  5714288 attctcatagtgata-gtggtgtattccatccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaactttgtc 5714386  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  5714387 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 5714477  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  5714478 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 5714528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 28393001 - 28392761
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| ||  ||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  28393001 attctcatagtgata-gtggtgtattccacccttcaacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 28392903  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | ||||||||||| |||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  28392902 cgtaaca--------ggatgactataaagttggttgatgagtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 28392812  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  28392811 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 28392761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 45 - 355
Target Start/End: Original strand, 20311629 - 20311935
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||||||||||||||| ||| ||  || ||||||||||||   |||||||||||||| || ||||||||||| |||||||||||| ||     
T  20311629 attctcatagtgataagtggtgtattccacccttctacttgaaaccactatttaccctagatgtaggattcgagtactttgttcccgtacaaacgttgt- 20311727  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
            ||||  |||| |||| | | || |||| || ||||||| ||||||||||  |||||||||||||||| ||||||||||||| | ||||| |     
T  20311728 -------ccgtagcaggatgactataaagtcggttaatcggtactccacgaatcatg-atgagggacatgagtgatctagatggaattt-tccctcccat 20311818  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatattaggccttat------tatagatatgagggcaaaaagataataatg 338  Q
    ||||||   |||||||||||||| ||||||||| | | || ||||||| |||| || |||||||      |||||| ||||| |||||| | ||||||||    
T  20311819 ataacatgagaaatgtctaagggcccaatattgtaatggacaagggtgtcatactatgccttatgttcaatatagacatgagagcaaaagggtaataatg 20311918  T
Q  339 cacaagatctttatcac 355  Q
    ||||| || ||||||||    
T  20311919 cacaatatatttatcac 20311935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 35224019 - 35224142
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    ||||||||||| |||||| |||||||||| | ||||||||||||||||||||||||||||||  ||||||| |||| ||  |||||||||| ||| ||||    
T  35224019 gttggttgatgtgtactccacgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctacataataggagaaatgtctacgggcccaa 35224117  T
Q  273 tattgaacttgaaaagggtgacata 297  Q
    ||||||||| || ||||||||||||    
T  35224118 tattgaactagacaagggtgacata 35224142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 8845543 - 8845873
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| | | || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  8845543 attctcatagtgata-gtggtgtattccatccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 8845641  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | |  ||||||||||||||||| | |||||||| | ||||||||| ||||||||||||||||||||   ||||||     
T  8845642 cgtaaca--------ggatgactataaatttggttgatgggtactccatgaatcatgct-gagggacattagtgacctagatggaatttgcctctcctac 8845732  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatatt--aggccttat------tatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| | | ||||||||||||| || |||| ||||| | |  | ||||| |      |||||| |||||||||||| | |||| |    
T  8845733 ataacaggagaaatgtctacgtgcccaatattgaactagacaaggatgacacagtctatgccttgtgttcaatatagacatgagggcaaaagggtaatta 8845832  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |  ||| |||| |||||||| ||| ||||||||||||||||    
T  8845833 tatacatgatcattatcacagaaaggtttcgtcagatcaca 8845873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 32646688 - 32646575
Alignment:
Q  28 tgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgtt 127  Q
    |||| |||||||| | ||||| | ||||||||||||||||||| |||| || |||||||||| ||| ||   ||| |||||| |||||  ||||||||||    
T  32646688 tgtataagtcacatgacattcccgtagtgataagtggtgtattttacccttcgacctgaaacaactctgtatcctggatgtatgagtcgggtactttgtt 32646589  T
Q  128 gccgtacaaacgtc 141  Q
    | ||||||||||||    
T  32646588 gtcgtacaaacgtc 32646575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 1941996 - 1942066
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| | |||||||||||||| ||||||||| |||||| ||||||    
T  1941996 acgttggttgatgggtacttgatgaatcatgct-gagggacatgagtgtcctagatgggatttgtccctcct 1942066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 4546334 - 4546404
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| | |||||||||||||| ||||||||| |||||| ||||||    
T  4546334 acgttggttgatgggtacttgatgaatcatgct-gagggacatgagtgtcctagatgggatttgtccctcct 4546404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 34975823 - 34975893
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| ||||||| |||||||| ||||||||| |||||| ||||||    
T  34975823 acgttggttgatgggtacttgatgaatcatg-ttgaggggcatgagtgccctagatgggatttgtccctcct 34975893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 176 - 294
Target Start/End: Original strand, 24701464 - 24701581
Alignment:
Q  176 ggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaatat 275  Q
    |||||||||||||||  | |||||||   ||||||||||||||||||| || |||||||  ||||||| | |||||   ||||||||||||| |||||||    
T  24701464 ggttgatgggtactccgcaaatcatgac-gagggacatgagtgacctatatagaatttgcccctcctacacaacaggataaatgtctaagggcccaatat 24701562  T
Q  276 tgaacttgaaaagggtgac 294  Q
    | || | ||||||||||||    
T  24701563 ttaattggaaaagggtgac 24701581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 3369053 - 3368983
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  3369053 acgttggttgatgggtacttgatgaatcatg-ctgaggggcatgagtgtcctagatgggatttgtccctcct 3368983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 10677449 - 10677371
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtacttt 124  Q
    ||||||||||||||| ||||||||||  ||| |||||| |||||||||||||   |||||||||||||||| ||| ||||    
T  10677449 attctcatagtgata-gtggtgtatttcaccctttgacttgaaaccactatgtatcctagatgtaggagtcgagtgcttt 10677371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 10891089 - 10891011
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtacttt 124  Q
    ||||||||||||||| ||||||||||  ||| |||||| |||||||||||||   |||||||||||||||| ||| ||||    
T  10891089 attctcatagtgata-gtggtgtatttcaccctttgacttgaaaccactatgtatcctagatgtaggagtcgagtgcttt 10891011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 5616661 - 5616737
Alignment:
Q  165 actgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||| ||||||||| ||||| ||  ||||||||||||| ||||||||||||||  |||||||| |||||| ||||||    
T  5616661 actgtaacgttggttaatgggcacatgacgaatcatgtt-gagggacatgagtgttctagatgggatttgtccctcct 5616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 24701345 - 24701434
Alignment:
Q  49 tcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaac 138  Q
    ||||| ||||||||  ||||||| ||| || ||||| |||||||| ||  ||||||||||||||||||| ||||||| || ||| |||||    
T  24701345 tcataatgataagtcttgtattccacccttcgacctaaaaccactgtgtaccctagatgtaggagtcaaatactttgatgtcgttcaaac 24701434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 9487826 - 9487893
Alignment:
Q  174 ttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    |||||||||||||||| || |||||||| ||||||||||||||||  ||| |||| |||||| ||||||    
T  9487826 ttggttgatgggtacttgatgaatcatg-ttgagggacatgagtgttctatatgggatttgtccctcct 9487893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 19926365 - 19926297
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  19926365 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 19926297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 2677285 - 2677355
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  2677285 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 2677355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 4676013 - 4675943
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  |||||| ||||||||  |||||||| |||||| ||||||    
T  4676013 acgttggttgatgggtacttgatgaatcatg-ctgaggggcatgagtgttctagatgggatttgtccctcct 4675943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 15461769 - 15461839
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  | |||| |||||||| ||||||||| |||||| ||||||    
T  15461769 acgttggttgatgggtacttgatgaatcatg-ctaaggggcatgagtgtcctagatgggatttgtccctcct 15461839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 15815293 - 15815363
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  15815293 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 15815363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 18111073 - 18111003
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  18111073 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 18111003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 18163434 - 18163504
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  |||||| ||||||||  |||||||| |||||| ||||||    
T  18163434 acgttggttgatgggtacttgatgaatcatg-ctgaggggcatgagtgttctagatgggatttgtccctcct 18163504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 18269675 - 18269742
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcac 376  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| |||||||||||||||    
T  18269675 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcac 18269742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 20244209 - 20244279
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  |||||| ||||||||  |||||||| |||||| ||||||    
T  20244209 acgttggttgatgggtacttgatgaatcatg-ctgaggggcatgagtgttctagatgggatttgtccctcct 20244279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 26531885 - 26531955
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  26531885 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 26531955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 35223900 - 35223978
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtacttt 124  Q
    ||||||||||||||| ||| ||||||| ||| |||||||||||||||| |||  || ||||||| |||||| ||| ||||    
T  35223900 attctcatagtgata-gtgttgtattccaccctttgacctgaaaccacgatgtaccttagatgttggagtcgagtgcttt 35223978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 1941914 - 1941963
Alignment:
Q  80 gacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgcc 130  Q
    |||||||||||||||||  |||||||||| ||| |||||||||||||||||    
T  1941914 gacctgaaaccactatgatccctagatgt-ggactcaagtactttgttgcc 1941963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 10677331 - 10677210
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    |||||| ||||||||||| | ||| |||| |  ||||| ||||||||| |||||||||||||   |||| | |||||||  |||||||||| | | ||||    
T  10677331 gttggtagatgggtactccatgaaccatgcta-agggatatgagtgacatagatggaatttgcctctccaatataacaggagaaatgtctatgagcccaa 10677233  T
Q  273 tattgaacttgaaaagggtgaca 295  Q
    ||||||||| || |||| |||||    
T  10677232 tattgaactagacaaggatgaca 10677210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 10890971 - 10890850
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    |||||| ||||||||||| | ||| |||| |  ||||| ||||||||| |||||||||||||   |||| | |||||||  |||||||||| | | ||||    
T  10890971 gttggtagatgggtactccatgaaccatgcta-agggatatgagtgacatagatggaatttgcctctccaatataacaggagaaatgtctatgagcccaa 10890873  T
Q  273 tattgaacttgaaaagggtgaca 295  Q
    ||||||||| || |||| |||||    
T  10890872 tattgaactagacaaggatgaca 10890850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 4546267 - 4546319
Alignment:
Q  77 tttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgcc 130  Q
    |||||||| |||||||||||  |||||||||| ||| |||||||||||||||||    
T  4546267 tttgacctaaaaccactatgatccctagatgt-ggactcaagtactttgttgcc 4546319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 9538230 - 9538309
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacag 251  Q
    ||||||||| ||||| ||| ||||||||||| |||||||||||||||  |||||||   |||||| ||||||  |||||||    
T  9538230 acgttggttaatgggcacttgacgaatcatg-ttgagggacatgagtttcctagattagatttgtccctccttcataacag 9538309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 28392739 - 28392671
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||| ||||||||||    
T  28392739 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcatcagatcaca 28392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 2e-38; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 45 - 377
Target Start/End: Complemental strand, 15357453 - 15357123
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  15357453 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 15357355  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||   |||||||     
T  15357354 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttacccctcctac 15357264  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca--tattaggcctt------attatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    ||| |||||      | |||||| |||||||||||| | |||| |    
T  15357263 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtttatgccttgtgttcaatatagacatgagggcaaaagggtaatta 15357164  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||||||| ||||||||||||||||    
T  15357163 tacacatgatcattatcacataaaggtttcgtcagatcaca 15357123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 16482350 - 16482110
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  16482350 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 16482252  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||  |||||||     
T  16482251 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgtt-gagggacatgagtgacctagatggaatttgcccctcctac 16482161  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  16482160 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 16482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 45 - 377
Target Start/End: Complemental strand, 17780985 - 17780655
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  17780985 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 17780887  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    |||||        ||||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||   ||||||     
T  17780886 cgtaa--------taggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcctctcctac 17780796  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacata--ttaggcctt------attatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| ||||| |   || |||||      | |||||| |||||||||||| | |||| |    
T  17780795 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacagtctatgccttgtgttcaatatagacatgagggcaaaagggtaatta 17780696  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | || | |||| |||||||||||| ||||||||||||||||    
T  17780695 tacatatgatcattatcacataaaggtttcgtcagatcaca 17780655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 6110404 - 6110644
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  6110404 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 6110502  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||| | |||||||     
T  6110503 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttttccctcctac 6110593  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  6110594 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 6110644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 8490835 - 8491075
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  8490835 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 8490933  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  8490934 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 8491024  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  8491025 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 8491075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 10572459 - 10572219
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  || ||||||| |||||| ||| ||||||  || | ||||||| ||     
T  10572459 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccgtagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 10572361  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  10572360 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgctcctcctac 10572270  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  10572269 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 10572219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 13248947 - 13249187
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||   ||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  13248947 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaacctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 13249045  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  13249046 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 13249136  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  13249137 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 13249187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 15600751 - 15600511
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  15600751 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 15600653  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||| | | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  15600652 cgtaaca--------ggatgactataaagttggttgatgggtaccccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 15600562  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  15600561 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 15600511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 15607296 - 15607056
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  15607296 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 15607198  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||| | | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  15607197 cgtaaca--------ggatgactataaagttggttgatgggtaccccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 15607107  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  15607106 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 15607056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 10579222 - 10578983
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  10579222 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 10579124  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||| ||||||||||||||||||||||  |||||||     
T  10579123 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggac-tgagtgacctagatggaatttgcccctcctac 10579034  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  10579033 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 10578983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 13211642 - 13211882
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||| ||||   ||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  13211642 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccattatgtaacctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 13211740  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  13211741 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 13211831  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  13211832 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 13211882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 15342086 - 15341846
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  15342086 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 15341988  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||   | |||||     
T  15341987 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttacccttcctac 15341897  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  15341896 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 15341846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 32056766 - 32056526
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| ||  ||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  32056766 attctcatagtgata-gtggtgtattccacccttcaacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 32056668  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||| ||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  32056667 cgtaaca--------ggatgactataaagttggttgatggatactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 32056577  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  32056576 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 32056526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 18520315 - 18520645
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || || ||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  18520315 attctcatagtgata-gtggtgtattccacccttcgaactgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 18520413  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    | ||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||| ||||||||||||||  |||||||     
T  18520414 cataaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgagctagatggaatttgcccctcctac 18520504  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca-----tat---taggccttattatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| |||||||||||||  | |||| |||||     |||   | |   ||| |||||| |||||||||||| |||||| |    
T  18520505 ataacaggagaaatgtctacgggcccaatattgaactacacaaggatgacacggtctatgccttgtgtttaatatagacatgagggcaaaaggataatta 18520604  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  18520605 tacacatgatcattatcacagaaaggtttcgtcagatcaca 18520645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 45 - 263
Target Start/End: Original strand, 18523003 - 18523211
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||  ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  18523003 attctcatagtgata-gtggtgtatttcacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 18523101  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||| ||| | ||||||||||||||||||||||||||||||| |||||||     
T  18523102 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaataatgct-gagggacatgagtgacctagatggaatttgtccctcctac 18523192  T
Q  245 ataacagaggaaatgtcta 263  Q
    |||||||  ||||||||||    
T  18523193 ataacaggagaaatgtcta 18523211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 173 - 377
Target Start/End: Original strand, 13517266 - 13517477
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    |||||| ||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  ||||||| |||||||  |||||||||| ||| ||||    
T  13517266 gttggtagatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaa 13517364  T
Q  273 tattgaacttgaaaagggtgacatatt--aggccttat------tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtt 364  Q
    ||||||||| || |||| |||||   |  | ||||| |      |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| |||    
T  13517365 tattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtt 13517464  T
Q  365 tcgtcagatcaca 377  Q
    |||||||||||||    
T  13517465 tcgtcagatcaca 13517477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 17200051 - 17199811
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  || ||||||| |||||| |||  |||||  || | |||| || |||    
T  17200051 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccttagatgttggagtcgagtgttttgtcaccattcaaatgttgtt 17199953  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||  |        ||| |||| | | |||||||||||||||||| | |||||||| | |||||||||||||| | |||||||||||||  |||||||     
T  17199952 cgtatca--------ggatgactataaagttggttgatgggtactccatgaatcatgat-gagggacatgagtgccgtagatggaatttgcccctcctac 17199862  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||  ||||||||||||| || |||| |||||    
T  17199861 ataacaggagaaatgtctacggacccaatattgaactagacaaggatgaca 17199811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 45 - 280
Target Start/End: Original strand, 17136693 - 17136918
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || ||| |||||||||||||  |||||||||| |||||| ||| ||| ||   | | ||||||| ||     
T  17136693 attctcatagtgata-gtggtgtattccacccttcgacttgaaaccactatgtaccctagatgttggagtcgagtgcttagtaaacattcaaacgttgtc 17136791  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||| ||||| | |||||||| | |||||||||||||||||||||||||||||   |||||||     
T  17136792 cgtaaca--------ggatgactataaagttggttgatggatactccatgaatcatgct-gagggacatgagtgacctagatggaattttcccctcctac 17136882  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaac 280  Q
    ||||| | ||||||||||| ||  ||||||||||||    
T  17136883 ataaccggggaaatgtctacggacccaatattgaac 17136918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 9504618 - 9504731
Alignment:
Q  15 acatagaacattttgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagt 114  Q
    |||||||||||| ||||  ||| ||| |||||||||||||||||||||||||||||  |||||||||||  | |||| | ||  ||||||||||| ||||    
T  9504618 acatagaacattatgtagtagtgacaagtcattctcatagtgataagtggtgtatttcaccgtttgaccaaacaccattgtgtaccctagatgtaagagt 9504717  T
Q  115 caagtactttgttg 128  Q
    || |||||||||||    
T  9504718 caggtactttgttg 9504731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 29974583 - 29974706
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacct-agatggaatttgtacctcctaaataacagaggaaatgtctaagggtcca 271  Q
    |||||||||||| ||||| |||||||||||| |||| ||||||||||||| || | |||||||  ||||||| |||||||  ||||||||||  || |||    
T  29974583 gttggttgatggatactccacgaatcatgtt-gaggaacatgagtgaccttaggtagaatttgcccctcctacataacaggagaaatgtctacaggccca 29974681  T
Q  272 atattgaacttgaaaagggtgacat 296  Q
    |||||||||| || |||||||||||    
T  29974682 atattgaactagacaagggtgacat 29974706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 29925430 - 29925552
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacc-tagatggaatttgtacctcctaaataacagaggaaatgtctaagggtcca 271  Q
    |||||||||||| ||||| |||||||||| |||||| |||||||||||| ||| | |||||||  ||||||| ||||| |  ||||||||||| || |||    
T  29925430 gttggttgatggatactccacgaatcatg-ttgaggaacatgagtgaccttaggtagaatttgcccctcctacataacgggagaaatgtctaa-ggccca 29925527  T
Q  272 atattgaacttgaaaagggtgacat 296  Q
    |||||||||| || |||||||||||    
T  29925528 atattgaactagacaagggtgacat 29925552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 1647388 - 1647148
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    |||| |||||||||| ||||||||||| ||| || ||||| ||||||||||   |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  1647388 attcccatagtgata-gtggtgtattccacccttcgacctaaaaccactatataccctagatgttggagtcgagtgctttgtcaccattcaaacgttgt- 1647291  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
            ||||| |||| |||| | |  |||||||||| |||||| | ||||||||  |||||||||||||||| ||||||| |||||   |||||||     
T  1647290 -------ccgtaacaggatgactataaatttggttgatgagtactccatgaatcatg-ctgagggacatgagtgatctagatgaaattttcccctcctac 1647199  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||| ||||||| || |||| |||||    
T  1647198 ataacaggtgaaatgtctacgggcccaattttgaactagacaaggatgaca 1647148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 16200770 - 16200850
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgt 126  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||||||||  |||||||||| | |||| ||| ||||||    
T  16200770 attctcatagtgata-gtggtgtattcaaccctttgacctgaaaccactatgtaccctagatgttgaagtcgagtgctttgt 16200850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 174 - 377
Target Start/End: Complemental strand, 1647268 - 1647058
Alignment:
Q  174 ttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaat 273  Q
    |||||||||| |||||| | |||||||| | ||||||||||||||| ||||||| |||||   ||||||| |||||||  |||||||||| ||| |||||    
T  1647268 ttggttgatgagtactccatgaatcatgct-gagggacatgagtgatctagatgaaattttcccctcctacataacaggtgaaatgtctacgggcccaat 1647170  T
Q  274 attgaacttgaaaagggtgacatatt--aggccttat------tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgttt 365  Q
     ||||||| || |||| |||||   |  | ||||| |      |||||| ||||||||||||   |||| || |||| |||| |||||||| ||| ||||    
T  1647169 tttgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagagtaattatacacatgatcattatcacagaaaggttt 1647070  T
Q  366 cgtcagatcaca 377  Q
    ||||||||||||    
T  1647069 cgtcagatcaca 1647058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Original strand, 14890663 - 14890742
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacag 251  Q
    ||||||||||||||||||| || |||||||| |  ||||||||||||| ||||||||| |||||| |||||| | ||||||    
T  14890663 acgttggttgatgggtacttgatgaatcatgcta-agggacatgagtgtcctagatgggatttgttcctcctcattaacag 14890742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 25978758 - 25978703
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatg 227  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||| ||||||||    
T  25978758 acgttggttgatgggtacttgatgaatcatg-ttgagggacatgagtgtcctagatg 25978703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 173 - 300
Target Start/End: Original strand, 9504768 - 9504894
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    ||||||||| |||| |||||| ||||||| |  |||||||  |||||||||||||||||||   ||||||| ||||  |  || ||||||||| | ||||    
T  9504768 gttggttgaggggtcctcgacaaatcatgcta-agggacacaagtgacctagatggaattttcccctcctacataatgggagatatgtctaagcgcccaa 9504866  T
Q  273 tattgaacttgaaaagggtgacatatta 300  Q
    ||||||||  || |||||||||||||||    
T  9504867 tattgaaccggacaagggtgacatatta 9504894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 11787859 - 11787929
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    |||||||||||||||||||  | |||||||||| |||||||||||||| ||||||| | |||||| ||||||    
T  11787859 acgttggttgatgggtacttaatgaatcatgtt-gagggacatgagtgtcctagataggatttgtccctcct 11787929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 12300182 - 12300252
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  12300182 acgttggttgatgggtacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 12300252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 21034510 - 21034580
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  21034510 acgttggttgatgggtacttgatgaatcatg-ctgaggggcatgagtgtcctagatgggatttgtccctcct 21034580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 28088378 - 28088448
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    |||||||||||||| |||| || |||||||| | |||||||||||||| ||||||||| |||||| ||||||    
T  28088378 acgttggttgatggatacttgatgaatcatgct-gagggacatgagtgtcctagatgggatttgtccctcct 28088448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 15537809 - 15537877
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||| ||||  ||||||||||||||| | |||||||||||||||||||||||  |||||| ||||||    
T  15537809 gttggttaatggacactcgacgaatcatgct-gagggacatgagtgacctagatgagatttgtccctcct 15537877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 29925311 - 29925379
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagt 114  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||| ||||  ||||||| || |||||    
T  29925311 attctcatagtgata-gtggtgtattccaccatttgacctgaaaccattatgtaccctagacgttggagt 29925379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 29974464 - 29974532
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagt 114  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||||||| ||||  ||||||| || |||||    
T  29974464 attctcatagtgata-gtggtgtattccaccatttgacctgaaaccattatgtaccctagacgttggagt 29974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 10572197 - 10572129
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  10572197 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 10572129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 10578961 - 10578893
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  10578961 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 10578893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 16482088 - 16482020
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  16482088 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 16482020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 20147584 - 20147514
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  20147584 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 20147514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 21399064 - 21399134
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  | |||| |||||||| ||||||||| |||||| ||||||    
T  21399064 acgttggttgatgggtacttgatgaatcatg-ctaaggggcatgagtgtcctagatgggatttgtccctcct 21399134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 55427293 - 55427363
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  |||||| ||||||||  |||||||| |||||| ||||||    
T  55427293 acgttggttgatgggtacttgatgaatcatg-ctgaggggcatgagtgttctagatgggatttgtccctcct 55427363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 23014967 - 23014897
Alignment:
Q  307 attatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||||| | |||||||||| |||||| || |||| || | |||||||| ||| ||||||||||||||||    
T  23014967 attatagacacgagggcaaaaggataattatacacatgaacattatcacagaaaggtttcgtcagatcaca 23014897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 25978840 - 25978791
Alignment:
Q  80 gacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgcc 130  Q
    |||||||||||||||||  |||||||||| ||| |||||||||||||||||    
T  25978840 gacctgaaaccactatgatccctagatgt-ggactcaagtactttgttgcc 25978791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 370
Target Start/End: Original strand, 8491097 - 8491158
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtca 370  Q
    |||||| |||||||||||| |||||| || |||| |||| |||||||| ||| |||||||||    
T  8491097 tatagacatgagggcaaaaggataattatacacatgatcattatcacagaaaggtttcgtca 8491158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 6110666 - 6110734
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| ||| |||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  6110666 tatagacatgggggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 6110734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 13211904 - 13211972
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| |||  |||||||||||||||    
T  13211904 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaagatttcgtcagatcaca 13211972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 15341824 - 15341756
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| ||||||| |||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  15341824 tatagacatgagggaaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 15341756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 15600489 - 15600421
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| ||||  ||||||| ||| ||||||||||||||||    
T  15600489 tatagacatgagggcaaaagggtaattatacacatgatcactatcacagaaaggtttcgtcagatcaca 15600421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 15607034 - 15606966
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| ||||  ||||||| ||| ||||||||||||||||    
T  15607034 tatagacatgagggcaaaagggtaattatacacatgatcactatcacagaaaggtttcgtcagatcaca 15606966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 79; Significance: 1e-36; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 45 - 280
Target Start/End: Complemental strand, 13817 - 13592
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  13817 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 13719  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||| ||||| | |||||||||| ||||||||||||||||||||||||||||||| |||||||     
T  13718 cgtaaca--------ggatgactataaagttggttgatggttactccatgaatcatgtt-gagggacatgagtgacctagatggaatttgtccctcctac 13628  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaac 280  Q
    |||||||  |||||||||| ||| ||||||||||||    
T  13627 ataacaggagaaatgtctacgggcccaatattgaac 13592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 6801 - 6561
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  6801 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 6703  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    | ||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||| |||||||     
T  6702 cataaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgtccctcctac 6612  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  6611 ataacaggagaaatgtctatgggcccaatattgaactagacaaggatgaca 6561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 6539 - 6471
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  6539 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 6471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 13555 - 13487
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  13555 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 13487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 78; Significance: 5e-36; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 2188 - 1948
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  2188 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 2090  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  2089 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 1999  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  1998 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 1948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 11079 - 10839
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  11079 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 10981  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  10980 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 10890  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  10889 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 10839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 1926 - 1858
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  1926 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 1858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 10817 - 10749
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  10817 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 10749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 5e-36; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 6094463 - 6094793
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||| ||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| |||    
T  6094463 attctcatagtgata-gtggtgtattccacccttcgaccagaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtt 6094561  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| ||        || |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||| ||||||||||||  |||||||     
T  6094562 cgtaacaa--------gatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgaccaagatggaatttgcccctcctac 6094652  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca--tattaggcctt------attatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||     || |||||      | |||||| |||||||||||||| |||| |    
T  6094653 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaaaggtaatta 6094752  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  6094753 tacacatgatcattatcacagaaaggtttcgtcagatcaca 6094793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 45 - 281
Target Start/End: Original strand, 15326538 - 15326764
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | |||| || ||     
T  15326538 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaatgttgtc 15326636  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||  |||||||     
T  15326637 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgtt-gagggacatgagtgacctagatggaatttgcccctcctac 15326727  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaact 281  Q
    |||||||  |||||||||| ||| |||||||||||||    
T  15326728 ataacaggagaaatgtctacgggcccaatattgaact 15326764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 45 - 281
Target Start/End: Original strand, 15506907 - 15507133
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | |||| || ||     
T  15506907 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaatgttgtc 15507005  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||  |||||||     
T  15507006 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgtt-gagggacatgagtgacctagatggaatttgcccctcctac 15507096  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaact 281  Q
    |||||||  |||||||||| ||| |||||||||||||    
T  15507097 ataacaggagaaatgtctacgggcccaatattgaact 15507133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 21941005 - 21941245
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  21941005 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 21941103  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | ||||||| || |||||||||||||||||||||||||||||   |||||||     
T  21941104 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatatt-gagggacatgagtgacctagatggaattttcccctcctac 21941194  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    ||||||   |||||||||| ||| ||||||||||||| || |||| |||||    
T  21941195 ataacatgagaaatgtctacgggcccaatattgaactagacaaggatgaca 21941245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 22171827 - 22172066
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  22171827 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 22171925  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | |||||||||||||||| |||||||||||||  |||||||     
T  22171926 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgac-tagatggaatttgcccctcctac 22172015  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  ||||||||||  || ||||||||||||| || |||| |||||    
T  22172016 ataacaggagaaatgtctacaggcccaatattgaactagacaaggatgaca 22172066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 51 - 295
Target Start/End: Original strand, 28548393 - 28548627
Alignment:
Q  51 atagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgttcgtaag 150  Q
    ||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| || |||||     
T  28548393 atagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtccgtaac 28548491  T
Q  151 aacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataaca 250  Q
    |  ||        |||| | | |||||||||||||||||| | |||||||| | |||||||||||||| |||||||||||||||  ||||||| ||||||    
T  28548492 agggt--------gactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtggcctagatggaatttgcccctcctacataaca 28548582  T
Q  251 gaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
       |||||||||| ||| ||||||||||||| || |||| |||||    
T  28548583 tgagaaatgtctacgggcccaatattgaactagacaaggatgaca 28548627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 45 - 275
Target Start/End: Original strand, 24642988 - 24643208
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    |||||||||||||||| |||||||||| ||| || || ||||||||||||||  |||||||||| ||||||||||  |||||  || | ||||||| ||     
T  24642988 attctcatagtgataa-tggtgtattccacccttcgaactgaaaccactatgtaccctagatgttggagtcaagtgttttgtcaccattcaaacgtggtc 24643086  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
     |||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||| |||||||||||||   |||||||     
T  24643087 tgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgatctagatggaattttcccctcctac 24643177  T
Q  245 ataacagaggaaatgtctaagggtccaatat 275  Q
    |||||||  |||||||||| ||| |||||||    
T  24643178 ataacaggagaaatgtctacgggcccaatat 24643208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 14983821 - 14983699
Alignment:
Q  15 acatagaacattttgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagt 114  Q
    ||||||||  || |||||| |||| | || |||||||||||||||||||||||||||   | || ||||||||| |||||||  ||||||||||| ||||    
T  14983821 acatagaaagttatgtaaatgtcataagttattctcatagtgataagtggtgtattccgtccttcgacctgaaatcactatgtaccctagatgtaagagt 14983722  T
Q  115 caagtactttgttgccgtacaaa 137  Q
    | |||||||||||  ||||||||    
T  14983721 cgagtactttgttttcgtacaaa 14983699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 22659524 - 22659454
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| | |||||||||||||| ||||||||| |||||| ||||||    
T  22659524 acgttggttgatgggtacttgatgaatcatgct-gagggacatgagtgtcctagatgggatttgtgcctcct 22659454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 6431158 - 6431228
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  ||||||||||||||| ||||||||  |||||| ||||||    
T  6431158 acgttggttgatgggtacttgatgaatcatg-ctgagggacatgagtgtcctagatgagatttgtccctcct 6431228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 8781885 - 8781836
Alignment:
Q  191 gacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcc 241  Q
    ||||||||||||| |||||||||||||| |||||||||||||||| |||||    
T  8781885 gacgaatcatgtt-gagggacatgagtgtcctagatggaatttgtccctcc 8781836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 2375347 - 2375386
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacct 84  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  2375347 attctcatagtgataagtggtgtattcaaccatttgacct 2375386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 2962962 - 2962892
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    |||||||||||||| |||| || |||||||| | |||||||||||||| ||||||||| || ||| ||||||    
T  2962962 acgttggttgatggttacttgatgaatcatgct-gagggacatgagtgtcctagatgggatctgtccctcct 2962892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 22130639 - 22130569
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  22130639 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 22130569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 27007547 - 27007477
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  27007547 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 27007477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 27014690 - 27014620
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  27014690 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 27014620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 27880517 - 27880447
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  27880517 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 27880447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 28020698 - 28020628
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  28020698 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 28020628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 24796748 - 24796675
Alignment:
Q  174 ttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataa 248  Q
    |||||||||||||||||  | ||||||||| || |||||||| ||||||||||| ||||||  ||||||| ||||    
T  24796748 ttggttgatgggtactccgcaaatcatgtt-gatggacatgactgacctagatgaaatttgcccctcctacataa 24796675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 8371283 - 8371203
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacaga 252  Q
    ||||||||||||||||||| || ||||||||  | |||| |||||||| ||||||||  |||||| |||||| | |||||||    
T  8371283 acgttggttgatgggtacttgatgaatcatg-ctaaggggcatgagtgtcctagatgagatttgtccctcctcattaacaga 8371203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 38232277 - 38232152
Alignment:
Q  15 acatagaacattttgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagt 114  Q
    ||||||||  || |||||| ||||||||| |||| |||| ||||||||||||||||| | | |  ||| |||||    | ||  |||| ||||||| |||    
T  38232277 acatagaaagttatgtaaatgtcacaggttattcgcataatgataagtggtgtattccatcctcagacttgaaattgatgtgtacccttgatgtagaagt 38232178  T
Q  115 caagtactttgttgccgtacaaacgt 140  Q
    | |||||||||||| |||||||||||    
T  38232177 cgagtactttgttgtcgtacaaacgt 38232152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 15326800 - 15326868
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| || | |||||||  ||||||||||||||||||||    
T  15326800 tatagacatgagggcaaaagggtaattatacacatgaacattatcacggaaatgtttcgtcagatcaca 15326868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 15507169 - 15507237
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| || | |||||||  ||||||||||||||||||||    
T  15507169 tatagacatgagggcaaaagggtaattatacacatgaacattatcacggaaatgtttcgtcagatcaca 15507237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 21941267 - 21941335
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| |||||| |||||||||    
T  21941267 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgacagatcaca 21941335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 5e-36; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 12738876 - 12739116
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| ||||||  |||||||||| | |||| ||| ||||||  || | ||||||| |||    
T  12738876 attctcatagtgata-gtggtgtattccaccgttcgacctgaaactactatgtaccctagatgttgtagtcgagtgctttgtcaccattcaaacgttgtt 12738974  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
     |||| |        ||| |||| | | |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||  |||||||     
T  12738975 tgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgtt-gagggacatgagtgacctagatggaatttggccctcctac 12739065  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  12739066 ataacaggagaaatgtctacgggaccaatattgaactagacaaggatgaca 12739116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 15152783 - 15153113
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  15152783 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 15152881  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||| ||||| ||||||||||||||||||||||||||||||  |||||||     
T  15152882 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaattatgtt-gagggacatgagtgacctagatggaatttgcccctcctac 15152972  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatatt--aggccttat------tatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||   |  | ||||| |      |||||| |||||||||||| | |||| |    
T  15152973 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaatta 15153072  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  15153073 tacacatgatcattatcacagaaaggtttcgtcagatcaca 15153113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 173 - 377
Target Start/End: Complemental strand, 11542728 - 11542517
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  ||||||| |||||||  |||||||||| ||| ||||    
T  11542728 gttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaa 11542630  T
Q  273 tattgaacttgaaaagggtgaca--tattaggcctt------attatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtt 364  Q
    |||||||||||| |||| |||||     || |||||      | |||||| |||||||||||| |||||| || |||| |||| |||||||| ||| |||    
T  11542629 tattgaacttgacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaaggataattatacacatgatcattatcacagaaaggtt 11542530  T
Q  365 tcgtcagatcaca 377  Q
    |||||||||||||    
T  11542529 tcgtcagatcaca 11542517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 29328124 - 29328454
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  29328124 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 29328222  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||| ||||||||||||| | |||||||| | |||||||||||||||||||||||||| |||  |||||||     
T  29328223 cgtaaca--------ggatgactataaagttgcttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaacttgcccctcctac 29328313  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatatt--aggccttat------tatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||   |  | ||||| |      |||||| |||||||||||| | |||| |    
T  29328314 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaatta 29328413  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  29328414 tacacatgatcattatcacagaaaggtttcgtcagatcaca 29328454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 11535929 - 11535689
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||| ||||||| | | || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  11535929 attctcatagtgata-gtgatgtattccaacattcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 11535831  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||   |||||||     
T  11535830 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaattttcccctcctac 11535740  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  11535739 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 11535689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 12751166 - 12751406
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || ||||||||||||||| |  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  12751166 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactaggtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 12751264  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||| ||||| | |||||||| | |||| |||||||||||||||||||||||||  |||||||     
T  12751265 cgtaaca--------ggatgactataaagttggttgatggatactccatgaatcatgct-gaggaacatgagtgacctagatggaatttgcccctcctac 12751355  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  12751356 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 12751406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 28 - 297
Target Start/End: Original strand, 2365242 - 2365502
Alignment:
Q  28 tgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgtt 127  Q
    |||||| |||| | || |||||||| |||||||||||||||||  ||| || ||||| || ||||||||  |||||||  | ||||||||||||||||||    
T  2365242 tgtaaatgtcataagttattctcattgtgataagtggtgtatttcaccattcgacctaaagccactatgtaccctagaccttggagtcaagtactttgtt 2365341  T
Q  128 gccgtacaaacgtcgttcgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatg 227  Q
    | ||||||||||||||         ||||| ||   |||| | | || |||||||| || ||| |||||||||| |||||||||||||||| | ||||||    
T  2365342 gtcgtacaaacgtcgt--------ccgtaacagattgactataaagtcggttgatgagtgctcaacgaatcatg-ttgagggacatgagtgtcatagatg 2365432  T
Q  228 gaatttgtacctcctaaataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacata 297  Q
    ||||||   ||||||| ||||||   || ||||||||||| ||||||||||| | || ||||||||||||    
T  2365433 gaatttacccctcctacataacaagagatatgtctaagggcccaatattgaaatggacaagggtgacata 2365502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 45 - 296
Target Start/End: Original strand, 13392490 - 13392731
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| |||||||| ||| |||||||  || ||||||| ||||||| || ||||||  || ||||||||| |||    
T  13392490 attctcatagtgata-gtggtgtattccaccctttgacctaaaatcactatgtaccatagatgttggagtcaggtgctttgtcaccatacaaacgttgtt 13392588  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
     |||| ||        || |||| | |  ||||||||||||||||| | |||||||| | ||| |||||||||||||||||| |||||||  |||||||     
T  13392589 tgtaacaa--------gatgactataaaattggttgatgggtactccatgaatcatgct-gagagacatgagtgacctagatagaatttgcccctcctac 13392679  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacat 296  Q
    ||||||    |||| |||| ||| ||||||||||||| || |||||||||||    
T  13392680 ataacatgaaaaatatctacgggcccaatattgaactagacaagggtgacat 13392731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 18561457 - 18561578
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    |||| ||||| ||||||  |||||||||| | ||||||||||||||||||||| ||||||||  ||||||| |||||||| |||||||||| ||| ||||    
T  18561457 gttgattgataggtactgcacgaatcatgct-gagggacatgagtgacctagagggaatttgcccctcctacataacagaagaaatgtctacgggcccaa 18561555  T
Q  273 tattgaacttgaaaagggtgaca 295  Q
    ||||||||| || |||| |||||    
T  18561556 tattgaactagacaaggatgaca 18561578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 34128845 - 34128915
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||| ||||||||| |||||| ||||||    
T  34128845 acgttggttgatgggtacttgatgaatcatgtt-gagggacatgagtgtcctagatgggatttgtccctcct 34128915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 41680998 - 41680928
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    |||||||||||| |||||| || |||||||||| |||||||||||||| |||||||||||||||| ||||||    
T  41680998 acgttggttgattggtacttgatgaatcatgtt-gagggacatgagtgtcctagatggaatttgtccctcct 41680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 18139368 - 18139298
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| ||||||| |||||||| ||||||||| |||||| ||||||    
T  18139368 acgttggttgatgggtacttgatgaatcatg-ttgaggggcatgagtgtcctagatgggatttgtccctcct 18139298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 252
Target Start/End: Complemental strand, 18257593 - 18257515
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacaga 252  Q
    ||||||||||||||||| || |||||||||| || ||||||||||| ||||||||| |||||| ||||||  ||||||||    
T  18257593 gttggttgatgggtacttgaagaatcatgtt-gatggacatgagtgtcctagatgggatttgtccctccttcataacaga 18257515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 47166889 - 47166819
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| ||  ||||||||| |||||||||||||| ||||||||| |||||| ||||||    
T  47166889 acgttggttgatgggtacttgataaatcatgtt-gagggacatgagtgtcctagatgggatttgtccctcct 47166819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 10668931 - 10668861
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| | |||||||||||||| || |||||| |||||| ||||||    
T  10668931 acgttggttgatgggtacttgatgaatcatgct-gagggacatgagtgtcccagatgggatttgtccctcct 10668861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 28130833 - 28130903
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    |||||||||||||||||||  | |||||||||| |||||||||||||| | |||||| ||||||| ||||||    
T  28130833 acgttggttgatgggtacttaatgaatcatgtt-gagggacatgagtgtcatagatgaaatttgtccctcct 28130903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 11535667 - 11535599
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  11535667 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 11535599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 14592123 - 14592186
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgt 235  Q
    ||||||| | ||||||||| || |||||||||| |||||||||||||| ||||||||| ||||||    
T  14592123 acgttggctaatgggtacttgatgaatcatgtt-gagggacatgagtgtcctagatgggatttgt 14592186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 2204824 - 2204894
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  2204824 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 2204894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 8465271 - 8465341
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  | ||||||||||||| ||||||| | |||||| ||||||    
T  8465271 acgttggttgatgggtacttgatgaatcatg-ctaagggacatgagtgtcctagataggatttgtccctcct 8465341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 18400376 - 18400446
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  18400376 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 18400446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 18407360 - 18407430
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  18407360 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 18407430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 30254410 - 30254480
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| ||  ||||||| |  ||||||||||||| ||||||||| |||||| ||||||    
T  30254410 acgttggttgatgggtacttgataaatcatgcta-agggacatgagtgtcctagatgggatttgtccctcct 30254480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 48808526 - 48808456
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  48808526 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 48808456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 11542847 - 11542774
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagt 119  Q
    ||||||||||||||| ||| ||||||| ||| || |||||||||||||||||  |||||||||  |||||| |||    
T  11542847 attctcatagtgata-gtgatgtattccacccttcgacctgaaaccactatgtaccctagatgctggagtcgagt 11542774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 7396676 - 7396728
Alignment:
Q  180 gatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaattt 233  Q
    ||||||||||| ||| |||||||| |||| |||||||||||||||||| |||||    
T  7396676 gatgggtactctacgcatcatgtt-gaggaacatgagtgacctagatgcaattt 7396728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Original strand, 12751428 - 12751496
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| |||||| || |||| |||  |||||| | ||| ||||||||||||||||    
T  12751428 tatagacatgagggcaaaaggataattatacacatgattattatcatagaaaggtttcgtcagatcaca 12751496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 18257677 - 18257618
Alignment:
Q  80 gacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgt 140  Q
    |||||||||||||||||  |||||||||| ||| |||||| |||||||||| | |||||||    
T  18257677 gacctgaaaccactatgatccctagatgt-ggactcaagtgctttgttgccattcaaacgt 18257618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 34128763 - 34128810
Alignment:
Q  80 gacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttg 128  Q
    |||||||||||||||||  |||||||||| ||| |||||||||||||||    
T  34128763 gacctgaaaccactatgatccctagatgt-ggactcaagtactttgttg 34128810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 47166971 - 47166924
Alignment:
Q  80 gacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttg 128  Q
    |||||||||||||||||  |||||||||| ||| |||||||||||||||    
T  47166971 gacctgaaaccactatgatccctagatgt-ggactcaagtactttgttg 47166924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 5e-36; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 377
Target Start/End: Original strand, 18252370 - 18252700
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  18252370 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 18252468  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  18252469 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 18252559  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatatt--aggccttat------tatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||   |  | ||||| |      |||||| |||||||||||| | |||| |    
T  18252560 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaagggtaatta 18252659  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||| ||| ||||||||||||||||    
T  18252660 tacacatgatcattatcacagaaaggtttcgtcagatcaca 18252700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 18532381 - 18532141
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  18532381 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 18532283  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  18532282 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 18532192  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  18532191 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 18532141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 15 - 377
Target Start/End: Complemental strand, 12014184 - 12013826
Alignment:
Q  15 acatagaacattttgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagt 114  Q
    |||||||||| | ||||||| ||||| |||||||||||||||||||||||||||||  ||| ||  |||| ||| |||| ||  | ||||||||||||||    
T  12014184 acatagaacaatatgtaaaaatcacaagtcattctcatagtgataagtggtgtatttcacccttcaacctaaaatcactgtgtactctagatgtaggagt 12014085  T
Q  115 caagtactttgttgccgtacaaacgtcgttcgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatg 214  Q
    || |||||||||||  ||| |||| |||| ||||| || ||        |||| | |  |  ||||||||||| | ||||||||||| ||||||||||      
T  12014084 catgtactttgttgttgtagaaacctcgtccgtaacaaggt--------gactataaactcagttgatgggtatttgacgaatcatg-ttgagggacaca 12013994  T
Q  215 agtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatattaggcctt------at 308  Q
    |||| |||||||||||||||  ||||| | ||||||   |||||||||||||| ||||||||||||| || ||||||| |||| || || ||      |     
T  12013993 agtgtcctagatggaatttgcccctccgacataacaagagaaatgtctaagggcccaatattgaactggacaagggtggcatactatgcattgtgttcaa 12013894  T
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| ||   |||| || |||||| ||||||||||| ||||||||||||| |||| |||||||||||    
T  12013893 tatagacattctggcagaaggataattatgcacaagatttttatcacataaaggttt-gtcagatcaca 12013826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 27131276 - 27131037
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  || ||||||| |||||| ||| ||||||  || | ||||||| ||     
T  27131276 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtacc-tagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 27131179  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||| ||||||  |||||||     
T  27131178 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatgtaatttgcccctcctac 27131088  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| |||||    
T  27131087 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 27131037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 16358902 - 16358662
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || | | ||||||||| |||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  16358902 attctcatagtgata-gtggtgtattccacccttcgtcttgaaaccaccatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 16358804  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||   |||||||     
T  16358803 cgtaaca--------ggatgactttaaagttggttgatgggtactccatgaatcatgtt-gagggacatgagtgacctagatggaattttcccctcctac 16358713  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    ||||||   |||||||||| ||| ||||||||||||| || |||| |||||    
T  16358712 ataacaagagaaatgtctacgggcccaatattgaactagacaaggatgaca 16358662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 9916646 - 9916541
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaa-ccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgt 143  Q
    ||||||||||||||||||||||||||| ||| || ||||||||| ||||||||  ||||||||||||||||| ||||||||||| |||| ||||||| ||    
T  9916646 attctcatagtgataagtggtgtattccacccttcgacctgaaaaccactatgtaccctagatgtaggagtcgagtactttgttaccgtccaaacgttgt 9916547  T
Q  144 tcgtaa 149  Q
     |||||    
T  9916546 ccgtaa 9916541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 45 - 295
Target Start/End: Complemental strand, 27310444 - 27310204
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||| ||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  27310444 attcttatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 27310346  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
     |||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||| |||||   |||||||     
T  27310345 tgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatgtaattttcccctcctac 27310255  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  ||||||||||  || ||||||||||||| || |||| |||||    
T  27310254 ataacaggagaaatgtctacaggcccaatattgaactagacaaggatgaca 27310204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 27277306 - 27277184
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    ||||||||| |||||||| |  ||||||||| |||||||||||||||||||||||||||||   ||||||| |||||||| |||||||||| ||| ||||    
T  27277306 gttggttgaagggtactccataaatcatgtt-gagggacatgagtgacctagatggaattttcccctcctacataacagaagaaatgtctacgggcccaa 27277208  T
Q  273 tattgaacttgaaaagggtgacat 296  Q
    ||| |||||  | |||||||||||    
T  27277207 tatcgaactgaacaagggtgacat 27277184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 45 - 296
Target Start/End: Complemental strand, 22641741 - 22641500
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||| ||||||| ||||||||||| ||| || |||||||||||||||||  || ||||||| |||||| ||| ||||||  || | ||||||| ||     
T  22641741 attctcacagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccgtagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 22641643  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
     |||| ||        || |||| | | |||||| ||||||||||| |||||||||| |  ||||||||||||||||||||||||||||   |||||||     
T  22641642 tgtaacaa--------gatgactataaagttggtcgatgggtactccacgaatcatgcta-agggacatgagtgacctagatggaattttcccctcctac 22641552  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacat 296  Q
    |||||||  | |||||||| ||| |||||||||| || || |||||||||||    
T  22641551 ataacaggagcaatgtctacgggcccaatattgatctggacaagggtgacat 22641500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 12006430 - 12006329
Alignment:
Q  28 tgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgtt 127  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||| ||| || ||||||||| || | ||  | |||||||||| ||||||||||||||||    
T  12006430 tgtaaaagtcacaagtcattctcatactgataagtggtgttttccacccttcgacctgaaatcattgtgtactctagatgtagaagtcaagtactttgtt 12006331  T
Q  128 gc 129  Q
    ||    
T  12006330 gc 12006329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 203 - 377
Target Start/End: Complemental strand, 31234640 - 31234461
Alignment:
Q  203 ttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatattagg 302  Q
    ||||||||||||||||||||||||| ||||||| |||| || || |||||  || ||||||| |||||||||||||||| || ||||||||||   || |    
T  31234640 ttgagggacatgagtgacctagatgaaatttgtccctcttacatgacagaaaaattgtctaa-ggtccaatattgaactggacaagggtgacacgctatg 31234542  T
Q  303 cctt------attatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    ||||      | |||||| ||||||||||||   ||||| | ||||||||  ||| |||||||| ||||||||||||||||    
T  31234541 ccttgtgttcaatatagacatgagggcaaaatagtaatattacacaagattgttagcacataaaggtttcgtcagatcaca 31234461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 3855667 - 3855546
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    |||||||||  ||||||| | |||||||| | ||||||||||||||||||||||| |||||   ||||| | |||||||  |||||||||| | | ||||    
T  3855667 gttggttgaccggtactccatgaatcatgct-gagggacatgagtgacctagatgaaattttcccctccaacataacaggagaaatgtctacgagcccaa 3855569  T
Q  273 tattgaacttgaaaagggtgaca 295  Q
    ||||||||| || |||| |||||    
T  3855568 tattgaactagacaaggatgaca 3855546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 20391269 - 20391199
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  20391269 acgttggttgatgggtacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 20391199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 27277425 - 27277347
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtacttt 124  Q
    ||||| ||||||||| ||||||||||| ||| ||||||||||||||||||||  |||| ||||| |||||| ||| ||||    
T  27277425 attcttatagtgata-gtggtgtattccaccctttgacctgaaaccactatgtaccctggatgttggagtcgagtgcttt 27277347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 47667515 - 47667445
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| |  ||||||||||||| ||||||||| |||||| ||||||    
T  47667515 acgttggttgatgggtacttgatgaatcatgcta-agggacatgagtgtcctagatgggatttgtccctcct 47667445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 35132466 - 35132515
Alignment:
Q  316 atgagggcaaaaagataataatgcacaagatctttatcacataaatgttt 365  Q
    ||||||||||||||||||| || ||||| ||| |||||||||||||||||    
T  35132466 atgagggcaaaaagataattatacacaaaatcattatcacataaatgttt 35132515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 18532119 - 18532051
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  18532119 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 18532051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 36816382 - 36816323
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaattt 233  Q
    |||||||||| ||||||| || ||||||| | ||||||||||||||||||||||| |||||    
T  36816382 gttggttgataggtactccacaaatcatgct-gagggacatgagtgacctagatgaaattt 36816323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 9456388 - 9456458
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  9456388 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 9456458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 20779675 - 20779605
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  20779675 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 20779605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 22670287 - 22670217
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  22670287 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 22670217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 28134753 - 28134683
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  | |||| |||||||| ||||||||| |||||| ||||||    
T  28134753 acgttggttgatgggtacttgatgaatcatg-ctaaggggcatgagtgtcctagatgggatttgtccctcct 28134683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 42817019 - 42816949
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  42817019 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 42816949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 43802395 - 43802325
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  | |||| |||||||| ||||||||| |||||| ||||||    
T  43802395 acgttggttgatgggtacttgatgaatcatg-ctaaggggcatgagtgtcctagatgggatttgtccctcct 43802325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 36816486 - 36816432
Alignment:
Q  61 gtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtc 115  Q
    ||||||||||| ||| ||||| ||||||||||||||  |||||||||| ||||||    
T  36816486 gtggtgtattccaccctttgaactgaaaccactatgtaccctagatgttggagtc 36816432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 3855786 - 3855718
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagt 114  Q
    ||||||| ||||||| ||||||||||| ||| || |||| ||||||||||||  |||||||||| |||||    
T  3855786 attctcacagtgata-gtggtgtattccaccattcgacccgaaaccactatgtaccctagatgttggagt 3855718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 27310182 - 27310114
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||| ||||||    
T  27310182 tatagacatgagggcaaaagggtaattatacacatgatcattatcacaaaaaggtttcgtcatatcaca 27310114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 28 - 376
Target Start/End: Complemental strand, 17298786 - 17298441
Alignment:
Q  28 tgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgtt 127  Q
    |||||| |||| | || |||||||||||||||||||| |||||| ||| ||  ||||||||||| ||||  |||||| | |||||||| |||||||||||    
T  17298786 tgtaaatgtcataagttattctcatagtgataagtggcgtattccacccttcaacctgaaaccaatatgtaccctaggtttaggagtcgagtactttgtt 17298687  T
Q  128 gccgtacaaacgtcgttcgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatg 227  Q
     |||||||||||| || |||||        ||||| |||| | |  | ||||||||||| ||| | || ||||| || ||||||||||||||||||||||    
T  17298686 tccgtacaaacgttgtccgtaa--------taggatgactataaaatcggttgatgggtgctccatgattcatgctt-agggacatgagtgacctagatg 17298596  T
Q  228 gaatttgtacctcctaaataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacatattaggcctt------attatagatatgagg 321  Q
    |||||||  ||||||| |||||||| ||||| |||||||| |  |||||||| | || |||||||||||| || |||||      | |||||| ||||||    
T  17298595 gaatttggccctcctacataacagaagaaatatctaagggacatatattgaattggacaagggtgacatactatgccttgtgttcaatatagacatgagg 17298496  T
Q  322 gcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcac 376  Q
    | |||| | |||| ||  | || ||| |||||||||||| ||||||||| |||||    
T  17298495 gaaaaatggtaattatatataacatcgttatcacataaaagtttcgtcaaatcac 17298441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 45 - 377
Target Start/End: Complemental strand, 19714365 - 19714035
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| || |||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||| | ||     
T  19714365 attctcatagtgata-gttgtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaactttgtc 19714267  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||  | |||||||||| |||||||||||| |||||||||||||||||  |||||||     
T  19714266 cgtaaca--------ggatgactataaagttggttgatgggtactacatgaatcatgtt-gagggacatgagcgacctagatggaatttgcccctcctac 19714176  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca-----tat---taggccttattatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| |||||||||||||  | |||| |||||     |||   | |   ||| |||||| |||||||||||| | |||| |    
T  19714175 ataacaggagaaatgtctacgggcccaatattgaactatacaaggatgacacggtctatgccttgtgtttaatatagacatgagggcaaaagggtaatta 19714076  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||||||| ||||||||||||||||    
T  19714075 tacacatgatcattatcacataaaggtttcgtcagatcaca 19714035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 45 - 249
Target Start/End: Complemental strand, 24695333 - 24695139
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  24695333 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 24695235  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  24695234 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 24695144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 49 - 297
Target Start/End: Complemental strand, 17285614 - 17285375
Alignment:
Q  49 tcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgttcgta 148  Q
    ||||||||||||||||| ||||| ||  || ||||||||| || ||||  |||||| | ||||| || ||||||||||| |||||||||| | || ||||    
T  17285614 tcatagtgataagtggtatattccactcttcgacctgaaatcaatatgtaccctaggtttaggattcgagtactttgtttccgtacaaactttgtccgta 17285515  T
Q  149 agaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataa 248  Q
    |        ||||| |||| | |  | ||||||||||| ||| | || ||||| || |||||||||||||||||||||||||||||  ||||||| ||||    
T  17285514 a--------taggatgactataaaatcggttgatgggtgctccatgattcatgctt-agggacatgagtgacctagatggaatttgcccctcctacataa 17285424  T
Q  249 cagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacata 297  Q
    |||  ||||| |||||||| | ||||||||| | || ||||||||||||    
T  17285423 caggagaaatatctaagggacaaatattgaattggacaagggtgacata 17285375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 173 - 281
Target Start/End: Complemental strand, 19706967 - 19706860
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    |||||||||||||||||| | |||||||| | |||||||||||| |||||||||| ||||||  ||||||| |||||||  |||||||||| ||| ||||    
T  19706967 gttggttgatgggtactccatgaatcatgct-gagggacatgagcgacctagatgaaatttgcccctcctacataacaggagaaatgtctacgggcccaa 19706869  T
Q  273 tattgaact 281  Q
    |||||||||    
T  19706868 tattgaact 19706860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 176 - 376
Target Start/End: Complemental strand, 17283201 - 17282996
Alignment:
Q  176 ggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaatat 275  Q
    ||||||||||| ||| | || ||||| || |||||||||||||||||||||||||||||  ||||||| |||||||  ||||| |||||||| | |||||    
T  17283201 ggttgatgggtgctccatgattcatgctt-agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatatctaagggacaaatat 17283103  T
Q  276 tgaacttgaaaagggtgacatattaggcctt------attatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtc 369  Q
    |||| | || |||||||||||| || || ||      | |||||| ||| |||||||| || ||| ||  | || ||| |||||||||||| ||||||||    
T  17283102 tgaattggacaagggtgacatactatgcattgtgttcaatatagacatgggggcaaaatgacaattatatataacatcgttatcacataaaagtttcgtc 17283003  T
Q  370 agatcac 376  Q
    |||||||    
T  17283002 agatcac 17282996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 173 - 377
Target Start/End: Original strand, 39539007 - 39539218
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    |||||||| | ||||||| |||||||||||| |||||||||||||||||||||||||||||   ||||||| ||||||   ||||||||||     ||||    
T  39539007 gttggttggtaggtactccacgaatcatgtt-gagggacatgagtgacctagatggaattttcccctcctacataacaagagaaatgtctacaaacccaa 39539105  T
Q  273 tattgaacttgaaaagggtgacata--ttaggcctt------attatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtt 364  Q
    || | || | || ||||||||||||  ||| |||||      | |||||| ||||| |||||| |||||| || |||| |||| || |||||||||||||    
T  39539106 taataaattggacaagggtgacatatgttatgccttgtgttcaatatagacatgagtgcaaaatgataattatacacatgatcattttcacataaatgtt 39539205  T
Q  365 tcgtcagatcaca 377  Q
    |||||||||||||    
T  39539206 tcgtcagatcaca 39539218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 28719503 - 28719383
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    |||||||||||||||||| ||||||||||  ||||| |||||||||||||||||| |||||   | ||||| ||||||   |||||||| | ||||||||    
T  28719503 gttggttgatgggtactccacgaatcatg-atgaggaacatgagtgacctagatgaaattttcccttcctacataacaagagaaatgtcaacgggtccaa 28719405  T
Q  273 tattgaacttgaaaagggtgac 294  Q
    |||| |||| || |||||||||    
T  28719404 tattaaactagacaagggtgac 28719383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 24701978 - 24701903
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataac 249  Q
    |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  ||||||| |||||    
T  24701978 gttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctacataac 24701903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 27347284 - 27347224
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttg 234  Q
    |||||||||||||||||| |||||||||| | ||||||||||| ||||||||||||||||||    
T  27347284 gttggttgatgggtactccacgaatcatgat-gagggacatgaatgacctagatggaatttg 27347224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 18806574 - 18806452
Alignment:
Q  15 acatagaacattttgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagt 114  Q
    ||||||||  ||||||||  |||| | || ||||||||||||||||||| ||||||| ||| ||  ||||||||||||||||  | |||||| |  ||||    
T  18806574 acatagaaagttttgtaactgtcataagttattctcatagtgataagtgatgtattccacccttcaacctgaaaccactatgtacactagatatgagagt 18806475  T
Q  115 caagtactttgttgccgtacaaa 137  Q
    |  ||||||||||| ||||||||    
T  18806474 cgtgtactttgttgtcgtacaaa 18806452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 18806754 - 18806632
Alignment:
Q  15 acatagaacattttgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagt 114  Q
    ||||||||  ||||||||  |||| | || ||||||||||||||||||| ||||||| ||| ||  ||||||||||||||||  | |||||| |  ||||    
T  18806754 acatagaaagttttgtaactgtcataagttattctcatagtgataagtgatgtattccacccttcaacctgaaaccactatgtacactagatatgagagt 18806655  T
Q  115 caagtactttgttgccgtacaaa 137  Q
    |  ||||||||||| ||||||||    
T  18806654 cgtgtactttgttgtcgtacaaa 18806632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 18806934 - 18806812
Alignment:
Q  15 acatagaacattttgtaaaagtcacaggtcattctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagt 114  Q
    ||||||||  ||||||||  |||| | || ||||||||||||||||||| ||||||| ||| ||  ||||||||||||||||  | |||||| |  ||||    
T  18806934 acatagaaagttttgtaactgtcataagttattctcatagtgataagtgatgtattccacccttcaacctgaaaccactatgtacactagatatgagagt 18806835  T
Q  115 caagtactttgttgccgtacaaa 137  Q
    |  ||||||||||| ||||||||    
T  18806834 cgtgtactttgttgtcgtacaaa 18806812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 421 - 487
Target Start/End: Complemental strand, 30807667 - 30807597
Alignment:
Q  421 agaagccctagatttctgaaaccctaaaac----cctttctctctaagccttcatctcgtagcagctagca 487  Q
    |||| |||||||||| ||||||||||||||    | |||||||||||||||||||||||||| ||||||||    
T  30807667 agaaaccctagatttatgaaaccctaaaactacccatttctctctaagccttcatctcgtaggagctagca 30807597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 9811763 - 9811693
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||| | ||||||  |||||| ||||||    
T  9811763 acgttggttgatgggtacttgatgaatcatg-ttgagggacatgagtgtcgtagatgagatttgtccctcct 9811693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 12703904 - 12703834
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||| | ||||||  |||||| ||||||    
T  12703904 acgttggttgatgggtacttgatgaatcatg-ttgagggacatgagtgtcgtagatgagatttgtccctcct 12703834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 12765020 - 12764950
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| | |||||||||||||| | ||||||| |||||| ||||||    
T  12765020 acgttggttgatgggtacttgatgaatcatgct-gagggacatgagtgtcgtagatgggatttgtccctcct 12764950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 7865457 - 7865390
Alignment:
Q  174 ttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    |||||||||||||||| || ||||||||  ||||||| ||||||| ||||||||| |||||| ||||||    
T  7865457 ttggttgatgggtacttgatgaatcatg-ctgagggatatgagtgtcctagatgggatttgtccctcct 7865390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 221 - 297
Target Start/End: Complemental strand, 17314678 - 17314602
Alignment:
Q  221 ctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacata 297  Q
    ||||||||||||||  ||||||| ||||||   ||||| |||||||| | ||||||||| | |||||||||||||||    
T  17314678 ctagatggaatttgctcctcctacataacatgagaaatatctaagggacaaatattgaattggaaaagggtgacata 17314602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 137
Target Start/End: Complemental strand, 18829431 - 18829340
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaa 137  Q
    ||||||||| ||||||||||||||||| | | |||||||| |||||||||||  | || |||||  |||||  ||||||||||| ||||||||    
T  18829431 attctcataatgataagtggtgtattccatcatttgacctaaaaccactatgtacact-gatgtgagagtcgtgtactttgttgtcgtacaaa 18829340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 24695063 - 24694995
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  24695063 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 24694995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 24701827 - 24701759
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  24701827 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 24701759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 32171 - 32241
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  32171 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 32241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 12789693 - 12789623
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  |||||| ||||||||  |||||||| |||||| ||||||    
T  12789693 acgttggttgatgggtacttgatgaatcatg-ctgaggggcatgagtgttctagatgggatttgtccctcct 12789623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 18569724 - 18569650
Alignment:
Q  49 tcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtacttt 124  Q
    ||||||||||| ||||||||||| ||| || |||||||||||||||||  ||||| |||| |||||| ||| ||||    
T  18569724 tcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctacatgttggagtcgagtgcttt 18569650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 20100271 - 20100217
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatgg 228  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||| || |||||||||    
T  20100271 gttggttgatgggtacttgacgaataatg-ttgagggacatgaatgtcctagatgg 20100217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 20941299 - 20941369
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  | |||| |||||||| ||||||||| |||||| ||||||    
T  20941299 acgttggttgatgggtacttgatgaatcatg-ctaaggggcatgagtgtcctagatgggatttgtccctcct 20941369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 22941522 - 22941592
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  | |||| |||||||| ||||||||| |||||| ||||||    
T  22941522 acgttggttgatgggtacttgatgaatcatg-ctaaggggcatgagtgtcctagatgggatttgtccctcct 22941592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 23546194 - 23546264
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  23546194 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 23546264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 24933336 - 24933266
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  |||||| ||||||||  |||||||| |||||| ||||||    
T  24933336 acgttggttgatgggtacttgatgaatcatg-ctgaggggcatgagtgttctagatgggatttgtccctcct 24933266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 25805415 - 25805345
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  | |||||||||| || ||||||||| |||||| ||||||    
T  25805415 acgttggttgatgggtacttgatgaatcatg-ctaagggacatgactgtcctagatgggatttgtccctcct 25805345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 31097088 - 31097158
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  | |||| |||||||| ||||||||| |||||| ||||||    
T  31097088 acgttggttgatgggtacttgatgaatcatg-ctaaggggcatgagtgtcctagatgggatttgtccctcct 31097158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 27347402 - 27347333
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtc 115  Q
    ||||||||||||||| || |||||||| ||| ||||||  ||||||||||||  |||||||||| ||||||    
T  27347402 attctcatagtgata-gttgtgtattccaccctttgacacgaaaccactatgtaccctagatgttggagtc 27347333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 19706824 - 19706756
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || |||| |||| |||||||| ||| ||||| ||||||||||    
T  19706824 tatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcatcagatcaca 19706756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 45 - 295
Target Start/End: Original strand, 7447 - 7687
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||| ||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  7447 attctcatagtgata-gtggtgtattccacccttcgacctgaaacaactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 7545  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  7546 cgtaaca--------ggatgactataaagttggttgatgggtactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 7636  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgaca 295  Q
    |||||||  ||||||||||  || ||||||||||||| || |||| |||||    
T  7637 ataacaggagaaatgtctacaggcccaatattgaactagacaaggatgaca 7687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 377
Target Start/End: Original strand, 7716 - 7777
Alignment:
Q  316 atgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||||||||| | |||| || |||| |||| |||||||| ||| ||||||||||||||||    
T  7716 atgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcaca 7777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 45 - 280
Target Start/End: Original strand, 18628 - 18852
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  18628 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 18726  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||| ||||| | |||||||| | ||||||||||||||||||||||||||||||  |||||||     
T  18727 cgtaaca--------ggatgactataaagttggttgatgg-tactccatgaatcatgct-gagggacatgagtgacctagatggaatttgcccctcctac 18816  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaac 280  Q
    |||||||  |||||||||| ||| ||||||||||||    
T  18817 ataacaggagaaatgtctacgggcccaatattgaac 18852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 45 - 296
Target Start/End: Complemental strand, 25857 - 25616
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||  || | ||||||| ||     
T  25857 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgtcaccattcaaacgttgtc 25759  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
    ||||| |        ||| |||| | | |||||||||||||||||| |  ||||||| | |||||||||||||||||||||||||||| |  |||||||     
T  25758 cgtaaca--------ggatgactataaagttggttgatgggtactccataaatcatgat-gagggacatgagtgacctagatggaattcgcccctcctac 25668  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacat 296  Q
     ||||||  |||||||||| ||| ||||||||||||| || |||| ||||||    
T  25667 gtaacaggagaaatgtctacgggcccaatattgaactagacaaggatgacat 25616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 25595 - 25527
Alignment:
Q  309 tatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    |||||| |||||||||||| | |||| || || |  ||| |||||||||||| ||||||||||||||||    
T  25595 tatagacatgagggcaaaagggtaattatacatataatcattatcacataaaggtttcgtcagatcaca 25527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 45 - 377
Target Start/End: Complemental strand, 230258 - 229928
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgttgccgtacaaacgtcgtt 144  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||| ||||  |||||||||| |||||| ||| ||||||  |  | ||||||| ||     
T  230258 attctcatagtgata-gtggtgtattctacccttcgacctgaaaccattatgtaccctagatgttggagtcgagtgctttgtcactattcaaacgttgtc 230160  T
Q  145 cgtaagaacgtaataggaggactgttacgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaa 244  Q
     |||| ||        || |||  | | |||||||| ||| ||| | | |||||||||| |||||||||||||||  ||||||||||| |  |||||||     
T  230159 tgtaacaa--------gatgacaataaagttggttggtggatacaccatgaatcatgtt-gagggacatgagtgatttagatggaattcgcccctcctac 230069  T
Q  245 ataacagaggaaatgtctaagggtccaatattgaacttgaaaagggtgacat--attaggcctt------attatagatatgagggcaaaaagataataa 336  Q
    |||||||  |||||||||| ||| ||||||||||||| || |||| ||||||   ||| | |||      | |||||| || ||||||||| | |||| |    
T  230068 ataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacatggtttatgtcttgtgttcaatatagacataagggcaaaagggtaatta 229969  T
Q  337 tgcacaagatctttatcacataaatgtttcgtcagatcaca 377  Q
    | |||| |||| |||||||||||||||||||||||||||||    
T  229968 tacacatgatcattatcacataaatgtttcgtcagatcaca 229928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 173 - 281
Target Start/End: Original strand, 5981 - 6088
Alignment:
Q  173 gttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaa 272  Q
    |||||||||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||  ||||||| |||||||  |||||||||| ||| | ||    
T  5981 gttggttgatgggtactccatcaatcatgat-gagggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggccaaa 6079  T
Q  273 tattgaact 281  Q
    |||| ||||    
T  6080 tattcaact 6088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 376
Target Start/End: Original strand, 24237 - 24441
Alignment:
Q  176 ggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacagaggaaatgtctaagggtccaatat 275  Q
    ||||||||| |||||| | ||||||||| |||||||||||||   ||||||||||||||  ||||| | ||||||   ||||||||||||| ||||||||    
T  24237 ggttgatggatactcgtcaaatcatgtt-gagggacatgagtattctagatggaatttgcccctccaacataacaagagaaatgtctaaggatccaatat 24335  T
Q  276 tgaacttgaaaagggtgacatattaggcctt------attatagatatgagggcaaaaagataataatgcacaagatctttatcacataaatgtttcgtc 369  Q
    | |||| || ||| |||||||| || | |||      | || | | ||||||||||||||||||| ||  |||| ||||||||||||| || ||||||||    
T  24336 taaactggacaagagtgacatactatgtcttgtgttcaatacaaacatgagggcaaaaagataattataaacaacatctttatcacat-aaggtttcgtc 24434  T
Q  370 agatcac 376  Q
    | |||||    
T  24435 aaatcac 24441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 1333 - 1413
Alignment:
Q  45 attctcatagtgataagtggtgtattctaccgtttgacctgaaaccactatgcgccctagatgtaggagtcaagtactttgt 126  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||  |||||||||| |||||| ||| ||||||    
T  1333 attctcatagtgata-gtggtgtattccacccttcgacctgaaaccactatgtaccctagatgttggagtcgagtgctttgt 1413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 67404 - 67334
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| | |||||||||||||| ||||||||| |||||| ||||||    
T  67404 acgttggttgatgggtacttgatgaatcatgct-gagggacatgagtgtcctagatgggatttgtccctcct 67334  T

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Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 171 - 252
Target Start/End: Original strand, 455 - 535
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcctaaataacaga 252  Q
    ||||||||||||||||||| || ||||||||  | ||| ||||||||| ||||||||| |||||| |||||| | |||||||    
T  455 acgttggttgatgggtacttgatgaatcatg-ctaaggaacatgagtgtcctagatgggatttgtccctcctcattaacaga 535  T

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Target: scaffold0376 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 11556 - 11486
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || |||||||| ||||||| |||||||   |||||||| |||||| ||||||    
T  11556 acgttggttgatgggtacttgatgaatcatg-ttgagggtcatgagttttctagatgggatttgtccctcct 11486  T

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Target: scaffold0297 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 258 - 328
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||||||| || ||||||||  | |||| |||||||| ||||||||| |||||| ||||||    
T  258 acgttggttgatgggtacttgatgaatcatg-ctaaggggcatgagtgtcctagatgggatttgtccctcct 328  T

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Target: scaffold0264 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 3705 - 3635
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  3705 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 3635  T

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Target: scaffold0111 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 26814 - 26884
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||| | |||||||||||| |||||||| ||||||||||| |||| ||||||||  |||||| ||||||    
T  26814 acgttggataatgggtactcgatgaatcatg-ttgagggacattagtgtcctagatgagatttgtccctcct 26884  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 242
Target Start/End: Original strand, 120002 - 120072
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgtacctcct 242  Q
    ||||||||||||||| ||| || ||||||||  |||||| |||||||| ||||||||| |||||| ||||||    
T  120002 acgttggttgatgggcacttgatgaatcatg-ctgagggtcatgagtgtcctagatgggatttgtccctcct 120072  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 88323 - 88282
Alignment:
Q  255 aaatgtctaagggtccaatattgaacttgaaaagggtgacat 296  Q
    ||||||||||||||||||||||||||| || || ||||||||    
T  88323 aaatgtctaagggtccaatattgaactggacaaaggtgacat 88282  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 171 - 235
Target Start/End: Original strand, 54036 - 54099
Alignment:
Q  171 acgttggttgatgggtactcgacgaatcatgtttgagggacatgagtgacctagatggaatttgt 235  Q
    ||||||||||||||||||| || ||||||||  | ||||||||||||| |||| |||| ||||||    
T  54036 acgttggttgatgggtacttgatgaatcatg-ctaagggacatgagtgtcctacatgggatttgt 54099  T

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