View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3784_low_4 (Length: 457)
Name: NF3784_low_4
Description: NF3784
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3784_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 435; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 1 - 455
Target Start/End: Complemental strand, 44984718 - 44984264
Alignment:
| Q |
1 |
tcacattaatatatgctgtatataatatatacaagtatcaaaattagtctaattttgtttaactttcacaggaagttgtttggtgaaatattcaacattt |
100 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44984718 |
tcacattaatatatgttgtatataatatatacaagtatcaaaattagtctaattttgtttaactttcacaggaagttgtttggtgaaatattcaacattt |
44984619 |
T |
|
| Q |
101 |
gatgaagcggatatggctattaaggctttaagcaatcagtatacatttcttggagtaagaacaatttcatatatgattggcggcttaagcaattccttta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44984618 |
gatgaagcggatatggctattaaggctttaagcaatcagtatacatttcctggagtaagaacaatttcatatatgattggcggcttaagcaattccttta |
44984519 |
T |
|
| Q |
201 |
tgataataatttgattaacttaaacacatctgatatttttgacacatttacattacccaggaatcatcacctgttgttgtcagatttgccgatcgaaaac |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44984518 |
tgataataatttgattaacttaaacacatctgatatttttgacacatttacattacccaggaatcatcacctgttgttgtcagatttgccgatcgaaaac |
44984419 |
T |
|
| Q |
301 |
gtgaacgttttggtaatcattttaccttctttaaatccttttgaaccaattattaaatacagtattcctctggcttagcaaggttccacttcttagttga |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44984418 |
gtgaacgttttggtaatcattttaccttctttaaatccttttgaaccaattattaaatacagtattcctctggcttagcaaggttccacttcttagttga |
44984319 |
T |
|
| Q |
401 |
tcaactaaaaccattttctccatccactttggttattttatgaaatatatctctg |
455 |
Q |
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|||| |||||||||||||| |||||||||||||||||||||||||||||||||| |
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|
| T |
44984318 |
tcaattaaaaccattttctttatccactttggttattttatgaaatatatctctg |
44984264 |
T |
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