View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3786_low_1 (Length: 789)

Name: NF3786_low_1
Description: NF3786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3786_low_1
NF3786_low_1
[»] chr2 (45 HSPs)
chr2 (251-512)||(17984051-17984316)
chr2 (670-779)||(17984657-17984766)
chr2 (670-779)||(17980863-17980971)
chr2 (274-358)||(17976547-17976631)
chr2 (1-51)||(13196693-13196743)
chr2 (58-106)||(17976196-17976244)
chr2 (185-223)||(17983900-17983938)
chr2 (1-46)||(33966319-33966364)
chr2 (1-50)||(42475128-42475177)
chr2 (1-51)||(2256964-2257014)
chr2 (4-50)||(17736787-17736833)
chr2 (5-47)||(19189766-19189808)
chr2 (5-38)||(1901512-1901545)
chr2 (5-50)||(29798539-29798584)
chr2 (1-50)||(34977198-34977247)
chr2 (1-50)||(40365424-40365473)
chr2 (114-150)||(17987251-17987287)
chr2 (1-44)||(19189862-19189905)
chr2 (1-44)||(27314867-27314910)
chr2 (4-47)||(32458113-32458156)
chr2 (1-44)||(38443536-38443579)
chr2 (1-51)||(9383227-9383277)
chr2 (1-51)||(9842220-9842270)
chr2 (4-50)||(13787551-13787597)
chr2 (58-92)||(17987213-17987247)
chr2 (1-51)||(18789408-18789458)
chr2 (1-51)||(24592864-24592914)
chr2 (1-47)||(25598580-25598626)
chr2 (1-51)||(41187475-41187525)
chr2 (1-55)||(44694677-44694731)
chr2 (1-50)||(7201501-7201550)
chr2 (1-50)||(11428868-11428917)
chr2 (1-34)||(16221364-16221397)
chr2 (1-50)||(16310822-16310871)
chr2 (1-50)||(19549430-19549479)
chr2 (1-50)||(22061281-22061330)
chr2 (1-46)||(24305323-24305368)
chr2 (1-34)||(29133502-29133535)
chr2 (1-50)||(29979942-29979991)
chr2 (1-46)||(31835489-31835534)
chr2 (1-46)||(33567659-33567704)
chr2 (1-50)||(35727431-35727480)
chr2 (1-50)||(36193962-36194011)
chr2 (1-50)||(40295476-40295525)
chr2 (1-38)||(41859858-41859895)
[»] chr5 (47 HSPs)
chr5 (670-742)||(29830777-29830849)
chr5 (1-51)||(18589885-18589935)
chr5 (1-50)||(11637590-11637639)
chr5 (1-45)||(16579392-16579436)
chr5 (4-50)||(8410466-8410512)
chr5 (1-50)||(1808611-1808660)
chr5 (5-50)||(10359619-10359664)
chr5 (5-50)||(14880406-14880451)
chr5 (5-50)||(18995638-18995683)
chr5 (1-50)||(22555225-22555274)
chr5 (1-50)||(25509305-25509354)
chr5 (1-50)||(28207126-28207175)
chr5 (1-50)||(38495136-38495185)
chr5 (1-50)||(40837921-40837970)
chr5 (5-49)||(22619869-22619913)
chr5 (15-50)||(2322287-2322322)
chr5 (1-48)||(5107263-5107310)
chr5 (2-45)||(6234819-6234862)
chr5 (4-47)||(26034629-26034672)
chr5 (1-48)||(28308414-28308461)
chr5 (4-50)||(1512849-1512895)
chr5 (4-50)||(8543570-8543616)
chr5 (1-51)||(10704349-10704399)
chr5 (4-50)||(12909187-12909233)
chr5 (1-47)||(13864341-13864387)
chr5 (1-47)||(17046331-17046377)
chr5 (1-47)||(22665221-22665267)
chr5 (4-50)||(24498578-24498624)
chr5 (8-50)||(24636673-24636715)
chr5 (5-47)||(29178444-29178486)
chr5 (1-50)||(31561361-31561411)
chr5 (4-46)||(38370748-38370790)
chr5 (1-43)||(43135001-43135043)
chr5 (1-50)||(1669598-1669647)
chr5 (1-46)||(3389160-3389205)
chr5 (1-46)||(10032292-10032337)
chr5 (1-50)||(10227774-10227823)
chr5 (5-46)||(15725336-15725377)
chr5 (1-50)||(17708068-17708117)
chr5 (1-50)||(23422886-23422934)
chr5 (1-38)||(25385058-25385095)
chr5 (1-50)||(27721693-27721742)
chr5 (1-50)||(32858664-32858713)
chr5 (1-50)||(33369431-33369480)
chr5 (1-50)||(33645707-33645756)
chr5 (1-50)||(37932324-37932373)
chr5 (1-46)||(41650957-41651002)
[»] chr1 (41 HSPs)
chr1 (673-775)||(15851296-15851397)
chr1 (5-49)||(47444928-47444972)
chr1 (1-51)||(15668491-15668541)
chr1 (1-39)||(52262184-52262222)
chr1 (1-50)||(1794590-1794639)
chr1 (1-50)||(26803469-26803518)
chr1 (5-50)||(27853349-27853394)
chr1 (1-50)||(30795695-30795744)
chr1 (5-50)||(41032925-41032970)
chr1 (1-50)||(48681951-48682000)
chr1 (1-50)||(52267758-52267807)
chr1 (1-37)||(32962570-32962606)
chr1 (673-769)||(25380714-25380812)
chr1 (1-44)||(28832189-28832232)
chr1 (1-47)||(3509959-3510005)
chr1 (12-50)||(6423791-6423829)
chr1 (4-50)||(24529679-24529725)
chr1 (1-51)||(25086476-25086526)
chr1 (8-50)||(39452454-39452496)
chr1 (1-51)||(42888568-42888618)
chr1 (8-50)||(52494050-52494092)
chr1 (1-50)||(64696-64745)
chr1 (1-46)||(1605394-1605439)
chr1 (4-49)||(2613717-2613762)
chr1 (5-46)||(7550894-7550935)
chr1 (1-50)||(8266204-8266253)
chr1 (1-50)||(13673539-13673588)
chr1 (1-50)||(16826348-16826397)
chr1 (1-50)||(20371836-20371885)
chr1 (1-50)||(20481094-20481143)
chr1 (5-50)||(26086923-26086968)
chr1 (1-50)||(27449463-27449512)
chr1 (1-50)||(32950779-32950828)
chr1 (2-43)||(35951726-35951767)
chr1 (1-50)||(37050923-37050972)
chr1 (1-50)||(37705119-37705168)
chr1 (1-50)||(42045390-42045439)
chr1 (5-50)||(44860905-44860950)
chr1 (1-50)||(48100716-48100765)
chr1 (1-46)||(50595901-50595946)
chr1 (4-49)||(51046137-51046182)
[»] chr7 (41 HSPs)
chr7 (1-50)||(27993047-27993096)
chr7 (1-51)||(21993175-21993225)
chr7 (1-50)||(1079710-1079759)
chr7 (1-50)||(23198767-23198816)
chr7 (1-50)||(46207754-46207803)
chr7 (1-50)||(47342671-47342720)
chr7 (1-50)||(47589571-47589620)
chr7 (1-52)||(9522904-9522955)
chr7 (1-44)||(44595656-44595699)
chr7 (4-50)||(24226002-24226048)
chr7 (1-50)||(10025988-10026037)
chr7 (1-50)||(13955474-13955523)
chr7 (1-50)||(19416508-19416557)
chr7 (1-50)||(27263335-27263384)
chr7 (1-50)||(27270229-27270278)
chr7 (5-50)||(36341087-36341132)
chr7 (1-50)||(37516820-37516869)
chr7 (1-50)||(44454506-44454555)
chr7 (731-775)||(12153096-12153140)
chr7 (4-47)||(44770164-44770207)
chr7 (1-51)||(580944-580994)
chr7 (1-51)||(3830061-3830111)
chr7 (8-50)||(4227553-4227595)
chr7 (1-51)||(10244720-10244770)
chr7 (1-39)||(24559494-24559532)
chr7 (4-50)||(24839482-24839528)
chr7 (1-51)||(30006110-30006160)
chr7 (1-51)||(35763698-35763748)
chr7 (1-51)||(39801699-39801749)
chr7 (1-51)||(40808177-40808227)
chr7 (4-49)||(2450575-2450620)
chr7 (1-50)||(4905270-4905319)
chr7 (1-50)||(5041333-5041382)
chr7 (1-50)||(6579612-6579661)
chr7 (1-50)||(8883547-8883596)
chr7 (1-50)||(19626543-19626592)
chr7 (1-46)||(36428146-36428191)
chr7 (1-50)||(39280836-39280885)
chr7 (1-50)||(40752857-40752906)
chr7 (1-50)||(46185191-46185240)
chr7 (1-50)||(48103692-48103741)
[»] chr4 (48 HSPs)
chr4 (1-50)||(15170117-15170166)
chr4 (5-50)||(32430145-32430190)
chr4 (1-50)||(35287525-35287574)
chr4 (6-51)||(36059021-36059066)
chr4 (1-51)||(40070986-40071036)
chr4 (1-50)||(7030911-7030960)
chr4 (5-50)||(9913893-9913938)
chr4 (1-50)||(9946421-9946470)
chr4 (1-46)||(16431614-16431659)
chr4 (1-50)||(23225859-23225908)
chr4 (1-50)||(42198594-42198643)
chr4 (1-50)||(43034360-43034409)
chr4 (1-50)||(51002281-51002330)
chr4 (1-50)||(51436624-51436673)
chr4 (1-49)||(10069106-10069154)
chr4 (1-49)||(24885818-24885866)
chr4 (4-51)||(2448142-2448189)
chr4 (1-40)||(13434919-13434958)
chr4 (4-47)||(32923251-32923294)
chr4 (4-50)||(4916149-4916195)
chr4 (5-51)||(12588862-12588908)
chr4 (1-47)||(12917633-12917678)
chr4 (1-47)||(31352109-31352155)
chr4 (5-55)||(31604315-31604365)
chr4 (1-51)||(36720671-36720721)
chr4 (4-50)||(38340341-38340387)
chr4 (1-51)||(39171388-39171438)
chr4 (1-43)||(44689493-44689535)
chr4 (1-50)||(241402-241451)
chr4 (1-50)||(2186351-2186400)
chr4 (1-50)||(8494981-8495030)
chr4 (1-50)||(10303529-10303578)
chr4 (1-50)||(10401414-10401463)
chr4 (1-50)||(15849228-15849277)
chr4 (1-50)||(16451203-16451252)
chr4 (1-50)||(17729420-17729469)
chr4 (1-50)||(19479495-19479544)
chr4 (1-50)||(19588148-19588197)
chr4 (1-50)||(21991265-21991314)
chr4 (1-46)||(28751209-28751254)
chr4 (5-50)||(30780123-30780168)
chr4 (1-50)||(32180824-32180873)
chr4 (1-50)||(43374290-43374339)
chr4 (10-47)||(44572588-44572625)
chr4 (5-46)||(47537468-47537509)
chr4 (1-50)||(48226516-48226565)
chr4 (1-50)||(52270048-52270097)
chr4 (1-50)||(54857633-54857682)
[»] chr3 (37 HSPs)
chr3 (1-50)||(22722396-22722445)
chr3 (1-50)||(28244122-28244171)
chr3 (1-47)||(32909319-32909365)
chr3 (1-49)||(3149094-3149142)
chr3 (1-51)||(8942010-8942060)
chr3 (1-50)||(1757687-1757736)
chr3 (1-50)||(7738663-7738712)
chr3 (1-50)||(8127457-8127506)
chr3 (1-50)||(21506776-21506825)
chr3 (1-50)||(32303354-32303403)
chr3 (1-50)||(41291718-41291767)
chr3 (1-50)||(44579630-44579679)
chr3 (2-46)||(5941313-5941357)
chr3 (1-49)||(25340942-25340990)
chr3 (1-49)||(30050446-30050494)
chr3 (1-48)||(52575943-52575990)
chr3 (1-47)||(14827522-14827568)
chr3 (4-50)||(23332644-23332690)
chr3 (4-50)||(27432228-27432274)
chr3 (4-50)||(33633339-33633385)
chr3 (1-47)||(34326001-34326047)
chr3 (11-45)||(35355611-35355645)
chr3 (1-47)||(43490435-43490481)
chr3 (1-51)||(48796236-48796286)
chr3 (1-39)||(49710725-49710763)
chr3 (1-51)||(52535883-52535933)
chr3 (1-50)||(7557552-7557601)
chr3 (1-50)||(7868716-7868765)
chr3 (1-50)||(10498713-10498762)
chr3 (1-50)||(32629074-32629123)
chr3 (1-50)||(32843280-32843329)
chr3 (1-50)||(38130977-38131026)
chr3 (1-50)||(39552458-39552507)
chr3 (1-50)||(40520746-40520795)
chr3 (2-51)||(46634574-46634623)
chr3 (1-50)||(51882218-51882267)
chr3 (1-50)||(54018424-54018473)
[»] chr6 (29 HSPs)
chr6 (1-50)||(12333586-12333635)
chr6 (1-50)||(29335593-29335642)
chr6 (1-49)||(28951394-28951442)
chr6 (1-47)||(2108722-2108768)
chr6 (1-51)||(2726435-2726485)
chr6 (1-51)||(3808136-3808186)
chr6 (5-51)||(5271386-5271432)
chr6 (1-51)||(13496109-13496159)
chr6 (1-47)||(24269880-24269926)
chr6 (1-50)||(3358385-3358434)
chr6 (1-50)||(9444951-9445000)
chr6 (1-49)||(2213292-2213340)
chr6 (4-44)||(9244130-9244170)
chr6 (3-50)||(4494891-4494938)
chr6 (4-51)||(16890469-16890516)
chr6 (1-51)||(24167908-24167958)
chr6 (1-47)||(33938697-33938743)
chr6 (1-39)||(34481432-34481470)
chr6 (1-46)||(7885539-7885584)
chr6 (1-50)||(9111041-9111090)
chr6 (1-50)||(12735261-12735310)
chr6 (1-46)||(17935727-17935772)
chr6 (10-51)||(19277567-19277608)
chr6 (10-51)||(20480658-20480699)
chr6 (1-46)||(20847529-20847574)
chr6 (4-49)||(24438303-24438348)
chr6 (1-46)||(26320581-26320626)
chr6 (1-50)||(32053782-32053831)
chr6 (1-50)||(34701141-34701190)
[»] chr8 (26 HSPs)
chr8 (4-51)||(21557426-21557473)
chr8 (1-51)||(13357459-13357509)
chr8 (5-51)||(18148824-18148870)
chr8 (1-46)||(13004163-13004208)
chr8 (1-50)||(24023433-24023482)
chr8 (1-50)||(30694457-30694506)
chr8 (1-54)||(37999438-37999491)
chr8 (1-45)||(5155581-5155625)
chr8 (2-50)||(14975882-14975930)
chr8 (5-51)||(8982560-8982606)
chr8 (1-39)||(11052981-11053019)
chr8 (4-46)||(15188897-15188939)
chr8 (1-46)||(1764972-1765017)
chr8 (1-50)||(6447183-6447232)
chr8 (1-50)||(8137929-8137978)
chr8 (5-50)||(10732797-10732842)
chr8 (10-51)||(15225798-15225839)
chr8 (1-50)||(18638094-18638143)
chr8 (1-50)||(24023830-24023879)
chr8 (511-548)||(26537969-26538006)
chr8 (1-50)||(29376895-29376944)
chr8 (1-50)||(29499765-29499814)
chr8 (1-50)||(29924935-29924984)
chr8 (1-50)||(34420880-34420929)
chr8 (1-50)||(39433404-39433453)
chr8 (1-50)||(44019543-44019592)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-50)||(12647-12696)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-50)||(161135-161184)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-50)||(185257-185306)
scaffold0011 (1-51)||(223151-223201)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-49)||(189608-189657)
[»] scaffold0062 (1 HSPs)
scaffold0062 (4-47)||(7471-7514)
[»] scaffold0735 (1 HSPs)
scaffold0735 (1-51)||(1521-1571)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-47)||(37532-37578)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-47)||(14204-14250)
[»] scaffold0012 (1 HSPs)
scaffold0012 (4-50)||(118813-118859)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-50)||(50990-51039)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-46)||(47259-47304)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-46)||(122889-122934)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-50)||(171153-171202)


Alignment Details
Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 251 - 512
Target Start/End: Original strand, 17984051 - 17984316
Alignment:
Q  251 ttgatgatatctctactatgtggatgtactgaaactttggaagggagggaggggtcatatatgtgtatgaaactggttcaaagacgaaattgattgcaaa 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17984051 ttgatgatatctctactatgtggatgtactgaaactttggaagggagggaggggtcatatatgtgtatgaaactggttcaaagacgaaattgattgcaaa 17984150  T
Q  351 gtaagatgtgcatggcttggctattgataggtatatgcaacttcattttcttttgttatattgataagaagtttcaaggcacg----taaggtggattct 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    ||||||| |||||    
T  17984151 gtaagatgtgcatggcttggctattgataggtatatgcaacttcattttctcttgttatattgataagaagtttcaaggcacgtacttaaggtgaattct 17984250  T
Q  447 cctctttgaattgaatctcttttatttatccattcaagttatttattttatgtcataaattttatt 512  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17984251 cctctttgaactgaatctcttttatttatccattcaagttatttattttatgtcataaattttatt 17984316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 670 - 779
Target Start/End: Original strand, 17984657 - 17984766
Alignment:
Q  670 gtgtgagaattatcaatcgtggattgtattaagatttgactttgaatgtaccaattcttagtgaatcttattattattacatagtcttattacttttgtc 769  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17984657 gtgtgagaattatcaatcatggattgtattaagatttgactttgaatctaccaattcttagtgaatcttattattattacatagtcttattacttttgtc 17984756  T
Q  770 gttgcctttg 779  Q
     |||||||||    
T  17984757 attgcctttg 17984766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 670 - 779
Target Start/End: Original strand, 17980863 - 17980971
Alignment:
Q  670 gtgtgagaattatcaatcgtggattgtattaagatttgactttgaatgtaccaattcttagtgaatcttattattattacatagtcttattacttttgtc 769  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  17980863 gtgtgagaattatcaatcatggattttattaagatttgactttgaatctaccaattcttagtgaatctta-tattattacatagtcttattacttttatc 17980961  T
Q  770 gttgcctttg 779  Q
     |||||||||    
T  17980962 attgcctttg 17980971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 274 - 358
Target Start/End: Original strand, 17976547 - 17976631
Alignment:
Q  274 atgtactgaaactttggaagggagggaggggtcatatatgtgtatgaaactggttcaaagacgaaattgattgcaaagtaagatg 358  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17976547 atgtactcaaactttggaagggagggaggggtcatatatgtgtatgaaactggttcaaagaagaaattgattgcaaagtaagatg 17976631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13196743 - 13196693
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  13196743 ttgcatatattatgcattgttcataccaactgagttaagttcacgaggact 13196693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 17976196 - 17976244
Alignment:
Q  58 gacatgtttgatcaaacttcatgttaactgttaaaatgaacattattta 106  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||    
T  17976196 gacatgtttgatcaaactccatgttaactgttaaaatgaactttattta 17976244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 17983900 - 17983938
Alignment:
Q  185 aaaagagtttatgacatttcttgtaagcttttttcgggc 223  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17983900 aaaagagtttatgacatttcttgtaagcttttttcgggc 17983938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33966364 - 33966319
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||    
T  33966364 ttgcatatattatgcattgttcataccaactgagttaagttcacga 33966319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42475128 - 42475177
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||||||    
T  42475128 ttgcatattttatgcattgtttataccaactgagttaagctcacgaggac 42475177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2257014 - 2256964
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||| ||||| |||||||||||| |||||||||||    
T  2257014 ttgcatatattatgcattgtccataccaactgagttaagctcacgaggact 2256964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 17736833 - 17736787
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||||||    
T  17736833 catattttatgcattgttcataccaactgagctaagctcacgaggac 17736787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 19189766 - 19189808
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  19189766 atatattatgcattgttcataccaactgagttaagttcacgag 19189808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 1901545 - 1901512
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaa 38  Q
    ||||||||||||||||||||||||||||||||||    
T  1901545 atattttatgcattgttcatactaactgagttaa 1901512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 29798539 - 29798584
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||    
T  29798539 atattttatgcattgtccataccaactgagttaagctcacgaggac 29798584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34977247 - 34977198
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| |||||||||||| ||||||||||    
T  34977247 ttgcatatattatgcattgtccataccaactgagttaagctcacgaggac 34977198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40365424 - 40365473
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| ||||||| |||| ||||||||||    
T  40365424 ttgcatattttatgcattgtacataccaactgagctaagctcacgaggac 40365473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 17987251 - 17987287
Alignment:
Q  114 ctggtgaataactctctcatgcttgggaaacttatct 150  Q
    |||||||| ||||||||||||||||||||||||||||    
T  17987251 ctggtgaaaaactctctcatgcttgggaaacttatct 17987287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19189862 - 19189905
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcac 44  Q
    ||||||||||||| |||||| |||||||||||||||||| ||||    
T  19189862 ttgcatattttatacattgtccatactaactgagttaagctcac 19189905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 27314910 - 27314867
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcac 44  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||    
T  27314910 ttgcatattttatgcattgttcttaccaactgagttaagctcac 27314867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 32458156 - 32458113
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    ||||| || |||||||||||||| ||||||||||||||||||||    
T  32458156 catatattgtgcattgttcataccaactgagttaagttcacgag 32458113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38443536 - 38443579
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcac 44  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||    
T  38443536 ttgcatatattatgcattgttcatacgaactgagttaagctcac 38443579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9383227 - 9383277
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||| ||||| ||||||| |||| |||||||||||    
T  9383227 ttgcatatattatgcattgtccataccaactgagctaagctcacgaggact 9383277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9842220 - 9842270
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||||||||||||| | ||| ||||||| |||| |||||||||||    
T  9842220 ttgcatattttatgcattgtccctaccaactgagctaagctcacgaggact 9842270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 13787551 - 13787597
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||| ||||||||||| |||||||||||||||| | ||||||||||    
T  13787551 catatattatgcattgtccatactaactgagttatgctcacgaggac 13787597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 17987213 - 17987247
Alignment:
Q  58 gacatgtttgatcaaacttcatgttaactgttaaa 92  Q
    |||||||||||| ||||||||||||||||||||||    
T  17987213 gacatgtttgataaaacttcatgttaactgttaaa 17987247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18789458 - 18789408
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||| || || |||||||||||| |||||||||||    
T  18789458 ttgcatatattatgcattgtccaaaccaactgagttaagctcacgaggact 18789408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24592864 - 24592914
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||| | ||| ||||||| ||||||||||||||||    
T  24592864 ttgcatatattatgcattgtccctaccaactgagctaagttcacgaggact 24592914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25598580 - 25598626
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||| ||||||||||| ||||| ||||||| ||||||||||||    
T  25598580 ttgcatatattatgcattgtccataccaactgagctaagttcacgag 25598626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41187475 - 41187525
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||||||||||||| ||||| |||| || |||| |||||||||||    
T  41187475 ttgcatattttatgcattgtccataccaactaagctaagctcacgaggact 41187525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44694731 - 44694677
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggactcatt 55  Q
    |||||||| |||||||||||  |||  ||||||||||||||||||||||| ||||    
T  44694731 ttgcatatattatgcattgtctatatcaactgagttaagttcacgaggacacatt 44694677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7201550 - 7201501
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| |||||||||||||| || ||||||| |||| ||||||||||    
T  7201550 ttgcatatattatgcattgttcaaaccaactgagctaagctcacgaggac 7201501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11428868 - 11428917
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||| | || ||||||||| ||||||||||    
T  11428868 ttgcatattttatgcattgtccattccaattgagttaagctcacgaggac 11428917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16221364 - 16221397
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgag 34  Q
    |||||||||||||||||||||||||| |||||||    
T  16221364 ttgcatattttatgcattgttcataccaactgag 16221397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16310871 - 16310822
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||| ||| ||| || ||| ||||||||||||||||    
T  16310871 ttgcatattttatgcatttttcctaccaattgaattaagttcacgaggac 16310822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19549479 - 19549430
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||||||| | |||||||||| ||| ||||||    
T  19549479 ttgcatatattatgcattgttcataccagctgagttaagctcatgaggac 19549430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22061330 - 22061281
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||| ||||| ||||| || |||| |||||||||||||||    
T  22061330 ttgcatattttatgtattgtacataccaattgagctaagttcacgaggac 22061281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24305323 - 24305368
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||||||||||||||| |||| |||||||| |||| ||||||    
T  24305323 ttgcatattttatgcattgtccatattaactgagctaagctcacga 24305368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29133502 - 29133535
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgag 34  Q
    |||||||||||||||||||||||||| |||||||    
T  29133502 ttgcatattttatgcattgttcataccaactgag 29133535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29979942 - 29979991
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||| || |||||||||||||  |||||||||    
T  29979942 ttgcatatattatgcattgttcttattaactgagttaagcccacgaggac 29979991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31835534 - 31835489
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||||    
T  31835534 ttgcatatgttatgcattgttcttaccaactgagataagttcacga 31835489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33567704 - 33567659
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||||| ||||||||||||| | ||||||| |||||||||||    
T  33567704 ttgcatatttcatgcattgttcatgccaactgagctaagttcacga 33567659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35727480 - 35727431
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||| ||| |||||||||||| ||||| ||||    
T  35727480 ttgcatatattatgcattgttcttaccaactgagttaagctcacggggac 35727431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36193962 - 36194011
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||||| || ||||||| |||  ||||||||||    
T  36193962 ttgcatattttatgcattgttcaaaccaactgaggtaacatcacgaggac 36194011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40295476 - 40295525
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||  ||||||||||||||||  || ||||||||||||||||||||    
T  40295476 ttgcatacattatgcattgttcatatcaattgagttaagttcacgaggac 40295525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41859895 - 41859858
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaa 38  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  41859895 ttgcatattttatgcattgtccataccaactgagttaa 41859858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 3e-16; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 670 - 742
Target Start/End: Complemental strand, 29830849 - 29830777
Alignment:
Q  670 gtgtgagaattatcaatcgtggattgtattaagatttgactttgaatgtaccaattcttagtgaatcttatta 742  Q
    |||||||||||||||||  | |||||| ||||||||||||||||||| |  ||||||||||||||||||||||    
T  29830849 gtgtgagaattatcaataatagattgtgttaagatttgactttgaatctctcaattcttagtgaatcttatta 29830777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18589885 - 18589935
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  18589885 ttgcatatattatgcattgttcataccaactgagttaagctcacgaggact 18589935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 11637590 - 11637639
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  11637590 ttgcatattttatgcattgtccataccaactgagttaagctcacgaggac 11637639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16579392 - 16579436
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacg 45  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||    
T  16579392 ttgcatatattatgcattgttcataccaactgagttaagttcacg 16579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 8410466 - 8410512
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||    
T  8410466 catattttatgcattgttcacactaactgagctaagctcacgaggac 8410512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1808611 - 1808660
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||| | ||||| ||||||| |||||||||||||||    
T  1808611 ttgcatattttatgcattatccataccaactgagctaagttcacgaggac 1808660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 10359619 - 10359664
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||| ||||||||||||||| ||||||| |||||||||||||||    
T  10359619 atatttaatgcattgttcataccaactgagctaagttcacgaggac 10359664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 14880451 - 14880406
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  14880451 atattttctgcattgttcataccaactgagttaagctcacgaggac 14880406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 18995683 - 18995638
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||||    
T  18995683 atatattatgcattgtccatacaaactgagttaagttcacgaggac 18995638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22555274 - 22555225
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  22555274 ttgcatattatatgcattgtccataccaactgagttaagctcacgaggac 22555225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25509354 - 25509305
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||| |||||||||| | |||||||||||||||| ||||||||||    
T  25509354 ttgcatattatatgcattgtccctactaactgagttaagctcacgaggac 25509305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28207175 - 28207126
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| ||||||| |||| ||||||||||    
T  28207175 ttgcatattttatgcattgtccataccaactgagctaagctcacgaggac 28207126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38495185 - 38495136
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||| | ||||| ||||||||||||||||| |||||    
T  38495185 ttgcatattttatgcattatccataccaactgagttaagttcacaaggac 38495136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40837921 - 40837970
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||  ||||| ||||| |||||||||||||||||||||||    
T  40837921 ttgcatattttatatattgtccataccaactgagttaagttcacgaggac 40837970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 22619913 - 22619869
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    |||||||||||||||||||||| ||||||| |||| |||||||||    
T  22619913 atattttatgcattgttcataccaactgagctaagctcacgagga 22619869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 2322287 - 2322322
Alignment:
Q  15 cattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||| |||||||||||||||||||||||    
T  2322287 cattgttcataccaactgagttaagttcacgaggac 2322322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5107263 - 5107310
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgagg 48  Q
    |||||||| ||||||||| ||||||| |||||||||||| ||||||||    
T  5107263 ttgcatatattatgcattattcataccaactgagttaagctcacgagg 5107310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 6234819 - 6234862
Alignment:
Q  2 tgcatattttatgcattgttcatactaactgagttaagttcacg 45  Q
    ||||||| ||||||||||||||||||||||||| |||| |||||    
T  6234819 tgcatatattatgcattgttcatactaactgagctaagctcacg 6234862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 26034629 - 26034672
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||    
T  26034629 catatattatgcattgttcataccaactgagttaagctcacgag 26034672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28308461 - 28308414
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgagg 48  Q
    ||||||| |||||||||||||||||| |||| || |||||||||||||    
T  28308461 ttgcatactttatgcattgttcataccaactaagctaagttcacgagg 28308414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 1512895 - 1512849
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||| ||||||||||| | |||||||||||||||| ||||||||||    
T  1512895 catatattatgcattgtccctactaactgagttaagctcacgaggac 1512849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 8543616 - 8543570
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||| || || |||||||||||| ||||||||||    
T  8543616 catattttatgcattgtccaaaccaactgagttaagctcacgaggac 8543570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10704349 - 10704399
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||||||||||||| ||||| ||||||| |||| |||| ||||||    
T  10704349 ttgcatattttatgcattgtccataccaactgagctaagctcacaaggact 10704399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 12909187 - 12909233
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||| ||||||||||||||||| ||||||| ||| |||||||||||    
T  12909187 catatattatgcattgttcataccaactgagctaaattcacgaggac 12909233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13864387 - 13864341
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||| ||||| ||||||||||| |||||||||||| |||||||    
T  13864387 ttgcatatattatgtattgttcataccaactgagttaagctcacgag 13864341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17046377 - 17046331
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||| ||||||||||| ||||| |||||||||||| |||||||    
T  17046377 ttgcatatattatgcattgtccataccaactgagttaagctcacgag 17046331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22665221 - 22665267
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    ||||||||||||| |||||| ||||||||||||| |||| |||||||    
T  22665221 ttgcatattttatacattgtccatactaactgagctaagctcacgag 22665267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 24498624 - 24498578
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||| ||||||  |||||||||||| ||||||||||    
T  24498624 catattttatgcattattcatatcaactgagttaagctcacgaggac 24498578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 24636673 - 24636715
Alignment:
Q  8 ttttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||| ||||||||||||| ||||| |||||||||    
T  24636673 ttttatgcattgtccatactaactgagctaagtccacgaggac 24636715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 29178486 - 29178444
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||||||||||| ||||| |||||||||||| |||||||    
T  29178486 atattttatgcattgtccataccaactgagttaagctcacgag 29178444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31561361 - 31561411
Alignment:
Q  1 ttgcatatt-ttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||| ||||||||||| ||||| |||||||||||| ||||||||||    
T  31561361 ttgcatattattatgcattgtccataccaactgagttaagctcacgaggac 31561411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 38370790 - 38370748
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||    
T  38370790 catattttatgcattgtttatattaattgagttaagttcacga 38370748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43135043 - 43135001
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttca 43  Q
    ||||||||||||||||||||||  || ||||||||||||||||    
T  43135043 ttgcatattttatgcattgttctaaccaactgagttaagttca 43135001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1669598 - 1669647
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||| ||||    
T  1669598 ttgcatatattatgcattgttcttaccaactgagctaagttcacggggac 1669647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3389205 - 3389160
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||| ||||||||||| ||||| |||||||||| ||||||||    
T  3389205 ttgcatatattatgcattgtccataccaactgagttatgttcacga 3389160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10032292 - 10032337
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||| ||||||||||| ||||| |||||||||||| ||||||    
T  10032292 ttgcatatgttatgcattgtccataccaactgagttaagctcacga 10032337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10227823 - 10227774
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||| ||||||||| | ||| |||||||||||| ||||||||||    
T  10227823 ttgcatatttcatgcattgtccttacgaactgagttaagctcacgaggac 10227774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 15725336 - 15725377
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||| |||| ||||||||||||||||||||||||| ||||||    
T  15725336 atatattatacattgttcatactaactgagttaagctcacga 15725377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17708117 - 17708068
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||  |||||||||| | ||||||||||    
T  17708117 ttgcatattttatgcattgtccatatcaactgagttatgctcacgaggac 17708068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23422886 - 23422934
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||| ||| || ||||||||||||||||||||    
T  23422886 ttgcatatattatgcattgttc-taccaattgagttaagttcacgaggac 23422934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25385095 - 25385058
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaa 38  Q
    |||||||||||||||||||||||||| || ||||||||    
T  25385095 ttgcatattttatgcattgttcataccaattgagttaa 25385058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27721693 - 27721742
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||| ||| ||||||| |||| ||||||||||    
T  27721693 ttgcatatattatgcattgttcctaccaactgagctaagctcacgaggac 27721742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32858713 - 32858664
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| ||| ||| |||| ||||||||||    
T  32858713 ttgcatattttatgcattgtccataccaacggagctaagctcacgaggac 32858664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33369431 - 33369480
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||  ||||| ||||||||||| |||||||||||| ||||||||||    
T  33369431 ttgcatacattatgtattgttcataccaactgagttaagctcacgaggac 33369480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33645707 - 33645756
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| |||| |||||| ||||| |||||||||||| ||||||||||    
T  33645707 ttgcatatattatacattgtccataccaactgagttaagctcacgaggac 33645756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37932373 - 37932324
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| ||||||| |||| ||||||||||    
T  37932373 ttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 37932324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41650957 - 41651002
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||| ||||||||||| ||||| |||||||||||| ||||||    
T  41650957 ttgcatatattatgcattgtccataccaactgagttaagctcacga 41651002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 673 - 775
Target Start/End: Complemental strand, 15851397 - 15851296
Alignment:
Q  673 tgagaattatcaatcgtggattgtattaagatttgactttgaatgtaccaattcttagtgaatcttattattattacatagtcttattacttttgtcgtt 772  Q
    ||||||||||||||| |  ||||| ||||||||| || |||||| |  |||| |||| || |||||||||||| ||||||||||||||||||||||| ||    
T  15851397 tgagaattatcaatcttaaattgtgttaagattttacattgaatctctcaat-cttattggatcttattattactacatagtcttattacttttgtcatt 15851299  T
Q  773 gcc 775  Q
    |||    
T  15851298 gcc 15851296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 47444928 - 47444972
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    |||||||||||||||||||||| |||| |||||||||||||||||    
T  47444928 atattttatgcattgttcataccaactaagttaagttcacgagga 47444972  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15668541 - 15668491
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    ||||||||||||||||||||||  || |||||||||||| |||||||||||    
T  15668541 ttgcatattttatgcattgttccaaccaactgagttaagatcacgaggact 15668491  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 52262184 - 52262222
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaag 39  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  52262184 ttgcatattttatgcattgttcataccaactgagttaag 52262222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1794639 - 1794590
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||||||||||| |||| ||||||||||    
T  1794639 ttgcatatattatgcattgtccatactaactgagctaagctcacgaggac 1794590  T

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Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26803469 - 26803518
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| ||||||| |||||||||||||||    
T  26803469 ttgcatatattatgcattgtccataccaactgagctaagttcacgaggac 26803518  T

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Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 27853394 - 27853349
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||| ||||||||||||||||| |||||||||||| ||||||||||    
T  27853394 atatattatgcattgttcataccaactgagttaagctcacgaggac 27853349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30795744 - 30795695
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||||||||    
T  30795744 ttgcatatattatgcattgttcttaccaactgagctaagttcacgaggac 30795695  T

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Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 41032970 - 41032925
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||    
T  41032970 atattttatgcattgttcatatcaactgagttaagctcacgaggac 41032925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 48681951 - 48682000
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||||||| ||||||| |||| ||||||||||    
T  48681951 ttgcatatattatgcattgttcataccaactgagctaagctcacgaggac 48682000  T

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Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 52267807 - 52267758
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| | ||| |||||||||||| ||||||||||    
T  52267807 ttgcatattttatgcattgtccttaccaactgagttaagctcacgaggac 52267758  T

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Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32962606 - 32962570
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagtta 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  32962606 ttgcatattttatgcattgttcataccaactgagtta 32962570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 769
Target Start/End: Original strand, 25380714 - 25380812
Alignment:
Q  673 tgagaattatcaatcgtggattgtattaagatttgactttgaatgtaccaattct--tagtgaatcttattattattacatagtcttattacttttgtc 769  Q
    ||||||||||||||    ||||| ||||| ||||||| ||||||    |||||||  ||| |||||||||||||||| ||| |||||||||||||||||    
T  25380714 tgagaattatcaataacagattgcattaatatttgacattgaatcactcaattctcctagcgaatcttattattattgcatggtcttattacttttgtc 25380812  T

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Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28832189 - 28832232
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcac 44  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||    
T  28832189 ttgcatatattatgcattgttcataccaactgagttaagctcac 28832232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3509959 - 3510005
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||| ||||||||||| ||||| ||||||| ||||||||||||    
T  3509959 ttgcatatattatgcattgtccataccaactgagctaagttcacgag 3510005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 50
Target Start/End: Original strand, 6423791 - 6423829
Alignment:
Q  12 atgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  6423791 atgcattgttcataccaactgagttaagctcacgaggac 6423829  T

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Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 24529725 - 24529679
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||| ||| |||||||||||||||||| ||| ||||||    
T  24529725 catattttatgcaatgtccatactaactgagttaagctcatgaggac 24529679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25086526 - 25086476
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||||||||||||| ||||| ||||||| |||| |||| ||||||    
T  25086526 ttgcatattttatgcattgtccataccaactgagctaagctcacaaggact 25086476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 39452496 - 39452454
Alignment:
Q  8 ttttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||    
T  39452496 ttttatgcattgttcataccaactgagctaagctcacgaggac 39452454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42888618 - 42888568
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||||||||||||| ||||| ||||||| |||| ||||| |||||    
T  42888618 ttgcatattttatgcattgtccataccaactgagctaagctcacgtggact 42888568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 52494092 - 52494050
Alignment:
Q  8 ttttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||| ||||||||||||| ||||| |||||||||    
T  52494092 ttttatgcattgtccatactaactgagctaagtccacgaggac 52494050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 64696 - 64745
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| | |||||| ||||||||||||| ||||||    
T  64696 ttgcatatattatgcattgtccttactaattgagttaagttcatgaggac 64745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1605439 - 1605394
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||||||||||||||| |||||||||| || |||| ||||||    
T  1605439 ttgcatattttatgcattgtccatactaactaagctaagctcacga 1605394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 2613762 - 2613717
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    ||||||||||||||||| ||||| ||||||| |||| |||||||||    
T  2613762 catattttatgcattgtccataccaactgagctaagctcacgagga 2613717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 7550935 - 7550894
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||||||||||||||||  |||||||||||| ||||||    
T  7550935 atattttatgcattgttcatatcaactgagttaagctcacga 7550894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8266204 - 8266253
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||  ||||||||||| ||||| |||||||||||| ||||||||||    
T  8266204 ttgcatacattatgcattgtccataccaactgagttaagatcacgaggac 8266253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13673588 - 13673539
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||||| || ||| ||| |||| ||||||||||    
T  13673588 ttgcatattttatgcattgttcaaaccaaccgagctaagctcacgaggac 13673539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16826397 - 16826348
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||  ||||||| |||| ||||||||||    
T  16826397 ttgcatattttatgcattgtccatagcaactgagctaagctcacgaggac 16826348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20371885 - 20371836
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||||| || ||| |||||||| |||| |||||    
T  20371885 ttgcatattttatgcattgttcaaaccaacggagttaagctcacaaggac 20371836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20481143 - 20481094
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||| ||||||||||||||| || ||||||| |||| ||||||||||    
T  20481143 ttgcataatttatgcattgttcaaaccaactgagctaagctcacgaggac 20481094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 26086968 - 26086923
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||| |||||||||| |||||| |||||||||||| ||||||||||    
T  26086968 atatattatgcattgatcataccaactgagttaagctcacgaggac 26086923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27449463 - 27449512
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| |||| |||||||| |||| ||||||||||    
T  27449463 ttgcatatattatgcattgtccatattaactgagctaagctcacgaggac 27449512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32950779 - 32950828
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| |||||||||||| |||| |||||||||||| ||||| ||||    
T  32950779 ttgcatatattatgcattgtttataccaactgagttaagctcacgtggac 32950828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 35951726 - 35951767
Alignment:
Q  2 tgcatattttatgcattgttcatactaactgagttaagttca 43  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||    
T  35951726 tgcatatattatgcaatgttcctactaactgagttaagttca 35951767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37050972 - 37050923
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||| ||||||| || ||||||||| ||||| ||||    
T  37050972 ttgcatattttatgcattattcataccaattgagttaagctcacgtggac 37050923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37705168 - 37705119
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| |  ||||||||||||||||||||    
T  37705168 ttgcatatattatgcattgtccataccagttgagttaagttcacgaggac 37705119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42045390 - 42045439
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| ||||||| |||| ||||||||||    
T  42045390 ttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 42045439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 44860905 - 44860950
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||| || || ||||||| |||||||||||||||    
T  44860905 atattttatgcattgtccaaaccaactgagctaagttcacgaggac 44860950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 48100765 - 48100716
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| ||||||| |||| |||| |||||    
T  48100765 ttgcatattttatgcattgtccataccaactgagctaagctcacaaggac 48100716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 50595901 - 50595946
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||||||||||||||||||||| || |||| |||| ||||||    
T  50595901 ttgcatattttatgcattgttcataccaattgagctaagctcacga 50595946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 51046182 - 51046137
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    ||||||||||| ||||||||||| |||||||||||  |||||||||    
T  51046182 catattttatgtattgttcataccaactgagttaaactcacgagga 51046137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27993047 - 27993096
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  27993047 ttgcatattttatgcattgttcataccaactgagttaagctcacgaggac 27993096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21993225 - 21993175
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  21993225 ttgcatattttatgcattgtccataccaactgagttaagctcacgaggact 21993175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1079710 - 1079759
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  1079710 ttgcatattttatgcattgttccaactaactgagttaagctcacgaggac 1079759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23198767 - 23198816
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  23198767 ttgcatattttatgcattgttcataccaactgagttaaactcacgaggac 23198816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 46207803 - 46207754
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||||||||    
T  46207803 ttgcatattttatgcattgttcataccaactgagctaagctcacgaggac 46207754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47342720 - 47342671
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  47342720 ttgcatattttatgcattgtccataccaactgagctaagttcacgaggac 47342671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 47589571 - 47589620
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||||||||    
T  47589571 ttgcatattttatgcattgttcataccaactgagctaagctcacgaggac 47589620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9522955 - 9522904
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggactc 52  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||| ||||||    
T  9522955 ttgcatatattatgcattgttcataccaactgagctaagttcacgcggactc 9522904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44595656 - 44595699
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcac 44  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||    
T  44595656 ttgcatattttatgcattgttcatactaactgagtaaagctcac 44595699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 24226002 - 24226048
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  24226002 catattttatgcattgtccatacgaactgagctaagttcacgaggac 24226048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10026037 - 10025988
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| || || |||||||||||| ||||||||||    
T  10026037 ttgcatattttatgcattgtccaaaccaactgagttaagctcacgaggac 10025988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13955523 - 13955474
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||| ||||    
T  13955523 ttgcatattttatgcattgttcataccaactgagctaagctcacgcggac 13955474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19416557 - 19416508
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| ||||||| |||| ||||||||||    
T  19416557 ttgcatattttatgcattgtccataccaactgagctaagctcacgaggac 19416508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27263384 - 27263335
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||| ||||    
T  27263384 ttgcatatattatgcattgtccataccaactgagttaagttcacggggac 27263335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27270278 - 27270229
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||| ||||    
T  27270278 ttgcatatattatgcattgtccataccaactgagttaagttcacggggac 27270229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 36341087 - 36341132
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||||    
T  36341087 atattttatgcattgttcataccaactgagttaagctcaagaggac 36341132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37516820 - 37516869
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| |||||||||||||||||| |||| |||||    
T  37516820 ttgcatatgttatgcattgtccatactaactgagttaagctcacaaggac 37516869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44454555 - 44454506
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| | ||| |||||||||||| ||||||||||    
T  44454555 ttgcatattttatgcattgtccctaccaactgagttaagctcacgaggac 44454506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 731 - 775
Target Start/End: Complemental strand, 12153140 - 12153096
Alignment:
Q  731 tgaatcttattattattacatagtcttattacttttgtcgttgcc 775  Q
    |||||| |||||||||| ||||||||||||||||||||| |||||    
T  12153140 tgaatcatattattattgcatagtcttattacttttgtcattgcc 12153096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 44770164 - 44770207
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    ||||||||||||||||| ||||| |||||||||||||| |||||    
T  44770164 catattttatgcattgtccataccaactgagttaagtttacgag 44770207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 580944 - 580994
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||||||||||||| ||||| ||| ||| |||| |||||||||||    
T  580944 ttgcatattttatgcattgtccataccaaccgagctaagctcacgaggact 580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3830111 - 3830061
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||| | ||| ||||||| ||||||||||||||||    
T  3830111 ttgcatatattatgcattgtccctacaaactgagctaagttcacgaggact 3830061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 4227553 - 4227595
Alignment:
Q  8 ttttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||    
T  4227553 ttttatgcattgtccataccaactgagttaagctcacgaggac 4227595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10244770 - 10244720
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||| ||||| ||||||| |||| |||||||||||    
T  10244770 ttgcatatattatgcattgtccataccaactgagctaagctcacgaggact 10244720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24559494 - 24559532
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaag 39  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  24559494 ttgcatatattatgcattgttcctactaactgagttaag 24559532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 24839528 - 24839482
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||  |||| |||||||||||| ||||||||||    
T  24839528 catattttatgcattgtctataccaactgagttaagctcacgaggac 24839482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30006110 - 30006160
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||  ||||||||| ||||||| ||||||| ||||||||||||||||    
T  30006110 ttgcatacattatgcattattcataccaactgagctaagttcacgaggact 30006160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35763748 - 35763698
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||| | ||| |||||||||||| |||||||||||    
T  35763748 ttgcatatattatgcattgtccttacgaactgagttaagctcacgaggact 35763698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39801749 - 39801699
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||| ||||| ||||||| |||| |||||||||||    
T  39801749 ttgcatatattatgcattgtccataccaactgagctaagctcacgaggact 39801699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40808177 - 40808227
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||||||||| ||| || || |||||||||||| |||||||||||    
T  40808177 ttgcatattttatgcactgtccaaaccaactgagttaagctcacgaggact 40808227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 2450620 - 2450575
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    ||||||||||| ||||||||||| |||||||||||| |||| ||||    
T  2450620 catattttatgtattgttcataccaactgagttaagctcacaagga 2450575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4905319 - 4905270
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| || |  |||||||||||| ||||||||||    
T  4905319 ttgcatattttatgcattgtccacaacaactgagttaagctcacgaggac 4905270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5041382 - 5041333
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| |||| ||||||| ||||||||||    
T  5041382 ttgcatatattatgcattgtccataccaactcagttaagctcacgaggac 5041333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6579661 - 6579612
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||| |||||| ||||| || ||||||||| ||||||||||    
T  6579661 ttgcatattttatacattgtccataccaattgagttaagctcacgaggac 6579612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8883596 - 8883547
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||| || ||||||||||| ||||| |||||||||||| ||||||||||    
T  8883596 ttgcacatattatgcattgtccataccaactgagttaagctcacgaggac 8883547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19626543 - 19626592
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| || || |||||||||||| ||||||||||    
T  19626543 ttgcatatattatgcattgtccaaaccaactgagttaagctcacgaggac 19626592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36428191 - 36428146
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    ||||||||||||| |||||| ||||| |||||||||||| ||||||    
T  36428191 ttgcatattttatacattgtccataccaactgagttaagctcacga 36428146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39280836 - 39280885
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||| ||||    
T  39280836 ttgcatatattatgcattgttcttaccaactgagctaagttcacggggac 39280885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40752857 - 40752906
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||| ||||| ||||||||||||| |||| ||||||||||    
T  40752857 ttgcatatattatgtattgtccatactaactgagctaagctcacgaggac 40752906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 46185191 - 46185240
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||| ||| || |||| ||| |||||||||||    
T  46185191 ttgcatattttatgcattgttcctaccaattgagctaaattcacgaggac 46185240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 48103692 - 48103741
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| |  || |||||||||||| ||||||||||    
T  48103692 ttgcatattttatgcattgtcccaaccaactgagttaagctcacgaggac 48103741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15170117 - 15170166
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  15170117 ttgcatatattatgcattgttcataccaactgagttaagttcacgaggac 15170166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 32430145 - 32430190
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  32430145 atattttatgcattgttcatactaactgagttaagctcacgaggac 32430190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 35287525 - 35287574
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||||||||    
T  35287525 ttgcatattttatgcattgttcataccaactgagctaagctcacgaggac 35287574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 36059066 - 36059021
Alignment:
Q  6 tattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  36059066 tattttatgcattgttcataccaactgagctaagttcacgaggact 36059021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40070986 - 40071036
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||||||||| |||||||||||| |||||| ||||    
T  40070986 ttgcatatattatgcattgttcataccaactgagttaagctcacgatgact 40071036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7030911 - 7030960
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||  |||| |||||||||||| ||||||||||    
T  7030911 ttgcatattttatgcattgtctataccaactgagttaagctcacgaggac 7030960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 9913938 - 9913893
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||||    
T  9913938 atattttatgcattgttcataccaactgagctaagctcacgaggac 9913893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9946470 - 9946421
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| ||||||| |||| ||||||||||    
T  9946470 ttgcatattttatgcattgtccataccaactgagctaagctcacgaggac 9946421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16431659 - 16431614
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||||    
T  16431659 ttgcatattttatgcattgtccataccaactgagctaagttcacga 16431614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23225908 - 23225859
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||| ||||||| ||| |||||||||||||||||||||||    
T  23225908 ttgcatatattatgaattgttcctaccaactgagttaagttcacgaggac 23225859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42198594 - 42198643
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||| |||| ||||||| |||||||| ||||||    
T  42198594 ttgcatattttatgcattgtttataccaactgagctaagttcaagaggac 42198643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43034360 - 43034409
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| |||||||||||| ||||||||||    
T  43034360 ttgcatatattatgcattgtccataccaactgagttaagctcacgaggac 43034409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 51002330 - 51002281
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||  |||| |||||||||||| ||||||||||    
T  51002330 ttgcatattttatgcattgtctataccaactgagttaagctcacgaggac 51002281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 51436624 - 51436673
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||| ||  |||||||||||||||||||||||    
T  51436624 ttgcatatattatgcattgttcgtatcaactgagttaagttcacgaggac 51436673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10069106 - 10069154
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    |||||||| |||| |||||||||||| ||||||| ||||||||||||||    
T  10069106 ttgcatatattatacattgttcataccaactgagctaagttcacgagga 10069154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24885818 - 24885866
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    |||||||||||||| ||||| ||||| |||||||||||| |||||||||    
T  24885818 ttgcatattttatgtattgtccataccaactgagttaagctcacgagga 24885866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 2448189 - 2448142
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    ||||||||||| ||||||||||| ||||||  ||||||||||||||||    
T  2448189 catattttatgtattgttcataccaactgaactaagttcacgaggact 2448142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13434919 - 13434958
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagt 40  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  13434919 ttgcatattttatgcattgtccaaactaactgagttaagt 13434958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 32923251 - 32923294
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||    
T  32923251 catatattatgcattgttcataccaactgagttaagctcacgag 32923294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 4916195 - 4916149
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||| |||||||||||||| || ||||||| |||||||||||||||    
T  4916195 catatattatgcattgttcaaaccaactgagctaagttcacgaggac 4916149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 12588862 - 12588908
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||| ||||||||||| ||||||||||||  ||||||||||    
T  12588862 atattttatgtattgttcataccaactgagttaagaccacgaggact 12588908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12917678 - 12917633
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||  |||||||||||||| |||||||||||||||||||||||    
T  12917678 ttgcatacattatgcattgttca-actaactgagttaagttcacgag 12917633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31352155 - 31352109
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||||||||||||||| ||||| |||| || ||||||||||||    
T  31352155 ttgcatattttatgcattgtccataccaacttagctaagttcacgag 31352109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 31604315 - 31604365
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggactcatt 55  Q
    |||||||||||||||||| ||| |||||||||||| ||||| |||| ||||    
T  31604315 atattttatgcattgttcttaccaactgagttaagctcacggggacacatt 31604365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36720721 - 36720671
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| |||| |||||||| ||| || |||||||||||||||||||||    
T  36720721 ttgcatatattatacattgttcctaccaattgagttaagttcacgaggact 36720671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 38340341 - 38340387
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||| ||||| ||||| |||||||||||| ||||||||||    
T  38340341 catattttatgtattgtccataccaactgagttaagctcacgaggac 38340387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39171388 - 39171438
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||||||||||||| ||||  ||||||| |||| |||||||||||    
T  39171388 ttgcatattttatgcattgtccatatcaactgagctaagctcacgaggact 39171438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44689535 - 44689493
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttca 43  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||    
T  44689535 ttgcatatattatgcattgttcttaccaactgagttaagttca 44689493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 241402 - 241451
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||||||| ||| ||| |||| | ||||||||    
T  241402 ttgcatattttatgcattgttcataccaaccgagctaagcttacgaggac 241451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 2186351 - 2186400
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| ||||||| |||| ||||||||||    
T  2186351 ttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 2186400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8495030 - 8494981
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| | ||| ||||||| |||||||||||||||    
T  8495030 ttgcatatattatgcattgtccctaccaactgagctaagttcacgaggac 8494981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10303529 - 10303578
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| | ||| ||||||| |||| ||||||||||    
T  10303529 ttgcatattttatgcattgtccttaccaactgagctaagctcacgaggac 10303578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10401414 - 10401463
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||| |||||||||||||||| ||||||  |||| ||||||||||    
T  10401414 ttgcatattgtatgcattgttcataccaactgaactaagctcacgaggac 10401463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15849277 - 15849228
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||| | ||||| ||||||| |||| ||||||||||    
T  15849277 ttgcatattttatgcattatccataccaactgagctaagctcacgaggac 15849228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16451252 - 16451203
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||  ||||||||||||  ||| |||||||||||||||||||||||    
T  16451252 ttgcataaattatgcattgtttgtaccaactgagttaagttcacgaggac 16451203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17729469 - 17729420
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| |||||||  |||||||| ||||||| |||||||||||||||    
T  17729469 ttgcatatattatgcaaggttcataccaactgagctaagttcacgaggac 17729420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19479495 - 19479544
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| |||||||||||||||| |||||||| |||| |||| |||||    
T  19479495 ttgcatatattatgcattgttcatattaactgagctaagctcacaaggac 19479544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19588197 - 19588148
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| || |||| |||| ||||||||||    
T  19588197 ttgcatattttatgcattgtccataccaattgagctaagctcacgaggac 19588148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21991265 - 21991314
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| |||| || |||| ||||||||||    
T  21991265 ttgcatattttatgcattgtccataccaactaagataagctcacgaggac 21991314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28751254 - 28751209
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||| ||||| |||||| ||||||||||||||||| ||||||    
T  28751254 ttgcatatattatgtattgtttatactaactgagttaagctcacga 28751209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 30780168 - 30780123
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||| ||||| |||||||||||| ||||| ||||    
T  30780168 atattttatgcattgtccataccaactgagttaagctcacgtggac 30780123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32180873 - 32180824
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||  |||| ||||||| |||| ||||||||||    
T  32180873 ttgcatattttatgcattgtctataccaactgagctaagctcacgaggac 32180824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43374290 - 43374339
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||  ||||||| |||| ||||||||||    
T  43374290 ttgcatattttatgcattgtccatatcaactgagctaagctcacgaggac 43374339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 44572625 - 44572588
Alignment:
Q  10 ttatgcattgttcatactaactgagttaagttcacgag 47  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  44572625 ttatgcattgtttctactaactgagttaagttcacgag 44572588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 47537468 - 47537509
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacga 46  Q
    ||||||||||||||||| |||| |||||||||||||| ||||    
T  47537468 atattttatgcattgtttataccaactgagttaagtttacga 47537509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 48226516 - 48226565
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| || |||| |||||||||| ||||    
T  48226516 ttgcatattttatgcattgtccataccaattgagctaagttcacgtggac 48226565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 52270048 - 52270097
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| ||||||| |||| ||||||||||    
T  52270048 ttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 52270097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 54857633 - 54857682
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||| |||| ||| ||| |||| ||||||||||    
T  54857633 ttgcatattttatgcattgtttataccaaccgagctaagctcacgaggac 54857682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22722445 - 22722396
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  22722445 ttgcatattttatgcattgttcatactaactgagctaagctcacgaggac 22722396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28244122 - 28244171
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  28244122 ttgcatattttatgcattgttcataccaactgagttaagctcacgaggac 28244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32909319 - 32909365
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||    
T  32909319 ttgcatattttatgcattgtccatactaactgagttaagctcacgag 32909365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3149094 - 3149142
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  3149094 ttgcatatttgatgcattgttcatacaaactgagttaagctcacgagga 3149142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8942060 - 8942010
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||||||||| |||||||||||| |||||| ||||    
T  8942060 ttgcatatattatgcattgttcataccaactgagttaagctcacgaagact 8942010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1757687 - 1757736
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||| ||| |||||||||||| ||||||||||    
T  1757687 ttgcatatattatgcattgttcctaccaactgagttaagctcacgaggac 1757736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7738712 - 7738663
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| | ||| |||||||||||| ||||||||||    
T  7738712 ttgcatattttatgcattgtccctaccaactgagttaagctcacgaggac 7738663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8127506 - 8127457
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| | ||| |||||||||||| ||||||||||    
T  8127506 ttgcatattttatgcattgtccttaccaactgagttaagctcacgaggac 8127457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21506776 - 21506825
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| ||||||| |||| ||||||||||    
T  21506776 ttgcatattttatgcattgtccataccaactgagctaagctcacgaggac 21506825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32303403 - 32303354
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||| ||| ||||||||||||||||| |||||||||| ||||||||||||    
T  32303403 ttgcgtatattatgcattgttcataccaactgagttacgttcacgaggac 32303354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41291767 - 41291718
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||| |||||||| ||| ||||||| |||||||||||||||    
T  41291767 ttgcatattttattcattgttcttaccaactgagctaagttcacgaggac 41291718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44579679 - 44579630
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| ||||||| |||| ||||||||||    
T  44579679 ttgcatattttatgcattgtccataccaactgagctaagctcacgaggac 44579630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 5941313 - 5941357
Alignment:
Q  2 tgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||||    
T  5941313 tgcatatattatgcattgttcataccaactgagttaagctcacga 5941357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25340942 - 25340990
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    |||||||||||||||||||| ||||| ||||||| |||| |||||||||    
T  25340942 ttgcatattttatgcattgtccataccaactgagctaagctcacgagga 25340990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30050446 - 30050494
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    |||||||| ||||||||||| |||||||||||||| ||| |||||||||    
T  30050446 ttgcatatattatgcattgtccatactaactgagtcaagctcacgagga 30050494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 52575990 - 52575943
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgagg 48  Q
    |||||||||||||||||||||||||| ||||||| |||| | ||||||    
T  52575990 ttgcatattttatgcattgttcataccaactgagctaagcttacgagg 52575943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14827568 - 14827522
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||||||||||||||| ||||| ||||||| |||| |||||||    
T  14827568 ttgcatattttatgcattgtccataccaactgagctaagctcacgag 14827522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 23332690 - 23332644
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  23332690 catatattatgcattgttcatatcaactaagttaagttcacgaggac 23332644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 27432274 - 27432228
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||| ||||||||||| ||||| |||| ||||||||||||||||||    
T  27432274 catatattatgcattgtacataccaactaagttaagttcacgaggac 27432228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 33633339 - 33633385
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||| |||||||||||  ||||||||||||||||| ||||||||||    
T  33633339 catatattatgcattgtctatactaactgagttaagctcacgaggac 33633385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34326001 - 34326047
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||| ||||||||||| ||||| |||||| |||||||||||||    
T  34326001 ttgcatatattatgcattgtccataccaactgaattaagttcacgag 34326047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 45
Target Start/End: Complemental strand, 35355645 - 35355611
Alignment:
Q  11 tatgcattgttcatactaactgagttaagttcacg 45  Q
    |||||||||||| ||||||||||||||||||||||    
T  35355645 tatgcattgttcctactaactgagttaagttcacg 35355611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43490435 - 43490481
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||| ||||||||||||||||| ||||||| |||| |||||||    
T  43490435 ttgcatatattatgcattgttcataccaactgagctaagctcacgag 43490481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 48796236 - 48796286
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||| || |||||||||| |||| |||||||||||    
T  48796236 ttgcatatcttatgcattgtccaaactaactgagctaagctcacgaggact 48796286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 49710763 - 49710725
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaag 39  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  49710763 ttgcatattttatgcattgttaataccaactgagttaag 49710725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 52535883 - 52535933
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||| |||||  ||||||||||||||||| |||||||||||    
T  52535883 ttgcatatattatgtattgtctatactaactgagttaagctcacgaggact 52535933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7557552 - 7557601
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||  ||||||||||| ||||| |||||||||||| ||||||||||    
T  7557552 ttgcatacattatgcattgtccataccaactgagttaagctcacgaggac 7557601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7868765 - 7868716
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||| ||| ||||||| |||| ||||||||||    
T  7868765 ttgcatatattatgcattgttcttaccaactgagctaagctcacgaggac 7868716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10498713 - 10498762
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| ||||||| |||| ||||||||||    
T  10498713 ttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 10498762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32629123 - 32629074
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| ||||||| |||| ||||| ||||    
T  32629123 ttgcatattttatgcattgtccataccaactgagctaagctcacgtggac 32629074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32843280 - 32843329
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| || || ||||||| |||| ||||||||||    
T  32843280 ttgcatattttatgcattgtccaaaccaactgagctaagctcacgaggac 32843329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38130977 - 38131026
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| |||||||||||| |||| |||||    
T  38130977 ttgcatatattatgcattgtccataccaactgagttaagctcacaaggac 38131026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39552507 - 39552458
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||| |||| |||| ||||||| ||| ||||||    
T  39552507 ttgcatattttatgcattgtttataccaactaagttaagctcatgaggac 39552458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40520795 - 40520746
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||| | ||||| |||||||||||| ||| ||||||    
T  40520795 ttgcatattttatgcattatccatacaaactgagttaagctcatgaggac 40520746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 46634574 - 46634623
Alignment:
Q  2 tgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    ||||||| ||||||||||| | ||||| |||||||||| |||||||||||    
T  46634574 tgcatatattatgcattgtccttactatctgagttaagctcacgaggact 46634623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 51882218 - 51882267
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| |||||||||||| ||||| ||||    
T  51882218 ttgcatatattatgcattgtccataccaactgagttaagctcacggggac 51882267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 54018424 - 54018473
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| |||| ||||||| | ||||||||    
T  54018424 ttgcatattttatgcattgtccataccaactaagttaaggttacgaggac 54018473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000005; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12333586 - 12333635
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  12333586 ttgcatattttatgcattgtccatactaactgagctaagctcacgaggac 12333635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29335593 - 29335642
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||    
T  29335593 ttgcatatattatgcattgtttatactaactgagttaagctcacgaggac 29335642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28951442 - 28951394
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    |||||||| ||||||||||||||||| |||||||||||| |||||||||    
T  28951442 ttgcatatattatgcattgttcataccaactgagttaagctcacgagga 28951394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2108768 - 2108722
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||    
T  2108768 ttgcatattttatgcattgtccataccaactgagttaagctcacgag 2108722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2726435 - 2726485
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||| ||||| |||||||||||||| |||||||||    
T  2726435 ttgcatatattatgcattgtccataccaactgagttaagtttacgaggact 2726485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3808136 - 3808186
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||| | |||||||||||||||||||||| |||||    
T  3808136 ttgcatatattatgcattgtccttactaactgagttaagttcacggggact 3808186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 5271432 - 5271386
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  5271432 atattttatgtattgtccataccaactgagttaagttcacgaggact 5271386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13496159 - 13496109
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||||||||  |||||||||||| |||||||||||    
T  13496159 ttgcatatattatgcattgttcatatcaactgagttaagctcacgaggact 13496109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24269926 - 24269880
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||||||||||||||| ||||||||||||| |||| |||||||    
T  24269926 ttgcatattttatgcattgtccatactaactgagctaagctcacgag 24269880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3358434 - 3358385
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| || || |||||||||||||||||||||||    
T  3358434 ttgcatatattatgcattgtccaaaccaactgagttaagttcacgaggac 3358385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9445000 - 9444951
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||| |||||||||||| ||||||| |||| ||||||||||    
T  9445000 ttgcatattttatacattgttcataccaactgagctaagctcacgaggac 9444951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2213340 - 2213292
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    |||||||| ||||||||||||| ||| || |||||||||||||||||||    
T  2213340 ttgcatatattatgcattgttcttaccaattgagttaagttcacgagga 2213292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 9244130 - 9244170
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcac 44  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  9244130 catattttattcattgttcataccaactgagttaagttcac 9244170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 4494891 - 4494938
Alignment:
Q  3 gcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||| ||||| ||||||| |||| ||||||||||    
T  4494891 gcatattttatgcattgtccataccaactgagctaagctcacgaggac 4494938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 16890469 - 16890516
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    ||||||||||||||||| ||||| |||| ||||||| |||||||||||    
T  16890469 catattttatgcattgtccataccaactaagttaagctcacgaggact 16890516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24167908 - 24167958
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||||||||||||| || || |||||||||||| |||| ||||||    
T  24167908 ttgcatattttatgcattgtacaaaccaactgagttaagctcacaaggact 24167958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33938697 - 33938743
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||| ||||||||||||||||| ||||||| |||| |||||||    
T  33938697 ttgcatatattatgcattgttcataccaactgagctaagctcacgag 33938743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34481432 - 34481470
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaag 39  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  34481432 ttgcatatataatgcattgttcatactaactgagttaag 34481470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7885584 - 7885539
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||||||||||||||  ||||| |||||||||||| ||||||    
T  7885584 ttgcatattttatgcattgaccataccaactgagttaagctcacga 7885539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9111090 - 9111041
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||||||| ||||||  |||| ||||||||||    
T  9111090 ttgcatatattatgcattgttcataccaactgaactaagctcacgaggac 9111041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12735261 - 12735310
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| |  || |||||||||||| ||||||||||    
T  12735261 ttgcatattttatgcattgtcccaaccaactgagttaagctcacgaggac 12735310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17935772 - 17935727
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||||||||||||||| || || ||||||| |||||||||||    
T  17935772 ttgcatattttatgcattgtccaaaccaactgagctaagttcacga 17935727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 19277608 - 19277567
Alignment:
Q  10 ttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    ||||||||||||| ||  ||||||||||||||||||||||||    
T  19277608 ttatgcattgttcctatcaactgagttaagttcacgaggact 19277567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 20480658 - 20480699
Alignment:
Q  10 ttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    ||||||||||||| ||| |||||||||||| |||||||||||    
T  20480658 ttatgcattgttcctaccaactgagttaagctcacgaggact 20480699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20847529 - 20847574
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||||||||||||||| || |||||||||| |||| ||||||    
T  20847529 ttgcatattttatgcattgtccaaactaactgagctaagctcacga 20847574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 24438303 - 24438348
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    ||||| ||||||||| ||| ||| ||||||||||||||||||||||    
T  24438303 catatattatgcattattcttaccaactgagttaagttcacgagga 24438348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26320581 - 26320626
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||||||||||||||| ||||| ||||||| |||| ||||||    
T  26320581 ttgcatattttatgcattgtccataccaactgagctaagctcacga 26320626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32053831 - 32053782
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| ||||||| |||| ||||||||||    
T  32053831 ttgcatatattatgcattgtccataccaactgagctaagctcacgaggac 32053782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34701190 - 34701141
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||| ||| ||||||  |||||||||||||||    
T  34701190 ttgcatatattatgcattgttcctaccaactgaactaagttcacgaggac 34701141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000007; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 21557473 - 21557426
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    ||||| ||||||||||| |||||||||||||||||| |||||||||||    
T  21557473 catatattatgcattgtccatactaactgagttaagctcacgaggact 21557426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13357459 - 13357509
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||| ||||||||||| ||||| |||||||||||| |||||||||||    
T  13357459 ttgcatatattatgcattgtccataccaactgagttaagctcacgaggact 13357509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 18148824 - 18148870
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||||    
T  18148824 atatattatgcattgttcatattaactgagttaagctcacgaggact 18148870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13004208 - 13004163
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||    
T  13004208 ttgcatattttatgcattgtccataccaactgagttaagctcacga 13004163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24023433 - 24023482
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||||  |||||||||| |||| ||||||||||    
T  24023433 ttgcatattttatgcattgttccaactaactgagctaagctcacgaggac 24023482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 30694457 - 30694506
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||| ||||    
T  30694457 ttgcatattttatgcattgttcatacaaactgagataagctcacgtggac 30694506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37999438 - 37999491
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggactcat 54  Q
    |||||||| ||||||||| | ||||| |||||||||||| ||||||||||||||    
T  37999438 ttgcatatattatgcattatccataccaactgagttaagctcacgaggactcat 37999491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5155581 - 5155625
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacg 45  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||    
T  5155581 ttgcatattttatgcattgttcttatcaactgagttaagttcacg 5155625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 14975882 - 14975930
Alignment:
Q  2 tgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||| ||||||||| ||||||| |||| ||||||||||    
T  14975882 tgcatattttatgcactgttcataccaactgagctaagctcacgaggac 14975930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 8982606 - 8982560
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||| |||||||||||||||||||||||| ||||  |||||||||||    
T  8982606 atatattatgcattgttcatactaactgaattaaactcacgaggact 8982560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11053019 - 11052981
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaag 39  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  11053019 ttgcatatattatgcattgtccatactaactgagttaag 11052981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 15188939 - 15188897
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacga 46  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||    
T  15188939 catatattatgcattgtccatactaactgagttaagctcacga 15188897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1764972 - 1765017
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||||    
T  1764972 ttgcatattttatgcgttgttcatatcaactgagttaagctcacga 1765017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6447232 - 6447183
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||| ||||| |||||||||||  ||||||||||    
T  6447232 ttgcatatattatgcattgtccataccaactgagttaaactcacgaggac 6447183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8137978 - 8137929
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| ||||||| |||| | ||||||||    
T  8137978 ttgcatattttatgcattgtccataccaactgagctaagcttacgaggac 8137929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 10732797 - 10732842
Alignment:
Q  5 atattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||| ||||||||||||||||| || ||||||||| ||||||||||    
T  10732797 atatattatgcattgttcataccaattgagttaagctcacgaggac 10732842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 15225839 - 15225798
Alignment:
Q  10 ttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    ||||||||||| |||||||||||||||||| |||| ||||||    
T  15225839 ttatgcattgtccatactaactgagttaagctcacaaggact 15225798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18638143 - 18638094
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||||  || ||||||| ||||||||| |||||    
T  18638143 ttgcatattttatgcattgttccaaccaactgagctaagttcactaggac 18638094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24023830 - 24023879
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| |||||||||| | |||| |||||    
T  24023830 ttgcatattttatgcattgtccataccaactgagttacgctcacaaggac 24023879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 548
Target Start/End: Original strand, 26537969 - 26538006
Alignment:
Q  511 ttgggataatggtgctttaccccatgtaatatatgtca 548  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  26537969 ttgggttaatggtgctttaccccttgtaatatatgtca 26538006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29376944 - 29376895
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||| ||||||| ||||| |||||||||||| ||||||||||    
T  29376944 ttgcatatattacgcattgtccataccaactgagttaagctcacgaggac 29376895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29499814 - 29499765
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| || |||| |||| ||||||||||    
T  29499814 ttgcatattttatgcattgtccataccaattgagctaagctcacgaggac 29499765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29924935 - 29924984
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||| ||  |||| ||||||||||||||||||    
T  29924935 ttgcatatattatgcattgttcttaacaactaagttaagttcacgaggac 29924984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34420880 - 34420929
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| || ||||||||| ||||| ||||    
T  34420880 ttgcatattttatgcattgtccataccaattgagttaagctcacgtggac 34420929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39433453 - 39433404
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||| ||||||||||  ||||||| |||| ||||||||||    
T  39433453 ttgcatattttatgtattgttcatatcaactgagctaagctcacgaggac 39433404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44019592 - 44019543
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||| ||||    
T  44019592 ttgcatatattatgcattgttcttaccaactgagctaagttcacggggac 44019543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12647 - 12696
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||| ||| |||||||||||||||  ||||||||||    
T  12647 ttgcatattttatgcattattcgtactaactgagttaaactcacgaggac 12696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 161184 - 161135
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| |||||||||||| |||| |||||    
T  161184 ttgcatattttatgcattgtccataccaactgagttaagctcacaaggac 161135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 185306 - 185257
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| ||||| ||||||| |||| ||||||||||    
T  185306 ttgcatattttatgcattgtccataccaactgagctaagctcacgaggac 185257  T

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Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 223201 - 223151
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||||||| ||||| ||||| ||||||| |||| |||||||||||    
T  223201 ttgcatattttatgtattgtccataccaactgagctaagctcacgaggact 223151  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 189608 - 189657
Alignment:
Q  1 ttgcatatt-ttatgcattgttcatactaactgagttaagttcacgagga 49  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  189608 ttgcatattattatgcattgtccataccaactgagttaagttcacgagga 189657  T

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Target: scaffold0062 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 7514 - 7471
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    ||||||||||||||||||||||| || ||||||||| |||||||    
T  7514 catattttatgcattgttcataccaattgagttaagctcacgag 7471  T

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Target: scaffold0735 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1571 - 1521
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggact 51  Q
    |||||||||||||||||||| ||||| ||||||| |||| ||||| |||||    
T  1571 ttgcatattttatgcattgtccataccaactgagctaagctcacgtggact 1521  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37578 - 37532
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||||||||||||||||||||| |||| || |||| |||||||    
T  37578 ttgcatattttatgcattgttcataccaacttagctaagctcacgag 37532  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14204 - 14250
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgag 47  Q
    |||||||| ||||||||||||||||| |||||||||||  |||||||    
T  14204 ttgcatatattatgcattgttcataccaactgagttaaactcacgag 14250  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 118859 - 118813
Alignment:
Q  4 catattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    |||||||||||||||||||| || ||||||| |||| ||||||||||    
T  118859 catattttatgcattgttcaaaccaactgagctaagctcacgaggac 118813  T

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Target: scaffold0069 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 51039 - 50990
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||||| || ||| |||||||| |||| |||||    
T  51039 ttgcatattttatgcattgttcaaaccaacggagttaagctcacaaggac 50990  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 47259 - 47304
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||||||||||||||| ||||| ||||||| |||| ||||||    
T  47259 ttgcatattttatgcattgtccataccaactgagctaagctcacga 47304  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 122934 - 122889
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacga 46  Q
    |||||||| ||||||||||||||||| || ||||||||| ||||||    
T  122934 ttgcatatattatgcattgttcataccaattgagttaagctcacga 122889  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 171202 - 171153
Alignment:
Q  1 ttgcatattttatgcattgttcatactaactgagttaagttcacgaggac 50  Q
    ||||||||||||||||||||||| || ||| ||| |||| ||||||||||    
T  171202 ttgcatattttatgcattgttcaaaccaaccgagctaagctcacgaggac 171153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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