View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3786_low_7 (Length: 359)
Name: NF3786_low_7
Description: NF3786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3786_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 15303696 - 15303932
Alignment:
| Q |
15 |
catagggatcaggggtatcactaggaattatgagttctttagcacacatctaaaacaagaaaaacaaagaaaataacagtaacagtgttcgttcaaaagg |
114 |
Q |
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| T |
15303696 |
catagggatcaggggtatcactaggaattatgagttctttagcacacatctaagacaagaaaaacaaagaaaataacagtgttagt-ttagttcaaaagg |
15303794 |
T |
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| Q |
115 |
aaaagaatgcaacaattgaagcatataaccagaagtgatatatatacgtacccctaaaccgtataagcattcagagaaatcggcgtgtttgattacgtca |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| | |||| |
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| T |
15303795 |
aaaagaatgcaacaattgaagcatataaccagaagtgatatatatacgtacccctaaatcgtataagcattcagagaaatcggtgtgtttgatcatgtca |
15303894 |
T |
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| Q |
215 |
atgataatgtaacctaaagggagtggaataatttgatg |
252 |
Q |
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| T |
15303895 |
atgatcatgtaacctaaagggagtggaataatttgatg |
15303932 |
T |
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