View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3786_low_9 (Length: 267)
Name: NF3786_low_9
Description: NF3786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3786_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 8 - 261
Target Start/End: Original strand, 1156568 - 1156821
Alignment:
| Q |
8 |
ctaaaactccgccaagtggaaaggttagaaaatttataattaagtttgcaaaatcattcccccctagagcatacaatatattgtcatctgattttcgtac |
107 |
Q |
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| T |
1156568 |
ctaaaactccaccaagtggaaaggttagaaaatttataattaagtttgcaaaatcattcccccctagggcatacaatatattgtcatccgattttcttac |
1156667 |
T |
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| Q |
108 |
cacaaacttcacggtgatttgaacatcactacaaaaaatgttttcaacatcacaagaggaaatcattgattgcatcattgatcgctcaatagatggtttc |
207 |
Q |
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| T |
1156668 |
gaccaacttgatggtgatttgaacatcactacaaaatatgttttcaacatcacaagaggaaattattgattgcatcattaatcgctcaatagatggtttc |
1156767 |
T |
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| Q |
208 |
tttcccaaaatcaaatcggttagaggtgtctttgaaagcaaggaacacttaagc |
261 |
Q |
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| T |
1156768 |
tttcccaaaaacaaatcggttagaggtgtcttggaaagcaaggaacacttaagc |
1156821 |
T |
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