View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3799_high_1 (Length: 442)
Name: NF3799_high_1
Description: NF3799
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3799_high_1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 405; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 1 - 442
Target Start/End: Original strand, 34883606 - 34884047
Alignment:
| Q |
1 |
ataaagttggctgcaagtaagtacatggttaaaattaaaatttgaaaacaaatttcagtctccaggaattagagaaatgaaaaataagctaacaagtaaa |
100 |
Q |
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| T |
34883606 |
ataaagttggctgcaagtaagtacatggttaaaattaaaatttgaaaacaaatttcagcctccaggaattagagaaatgaaaaataagctaacaagtaaa |
34883705 |
T |
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| Q |
101 |
tttctgtgtaaactttgtggagagcggggggaaatatacctccaatatctgttgaagaaaatagacaggacttgaaatccaaaggaaccatcgaaaaatc |
200 |
Q |
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| T |
34883706 |
tttctgtgtaaactttgtggagagcggggggaaatataccttcaatatcagttgaagaaaatagacaggacttgaaatccaaaggaaccatcgaaaaatc |
34883805 |
T |
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| Q |
201 |
agcacagatctgacgaagtcttagaatcatacttagtatagtggaataactagatactagtctgtcattgctgttatgatgcatcataagcgactttatt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34883806 |
agcacagatctgacgaagtcttagaatcatacttagtacagtggaataactagatactagtctgtcattgctgttatgatgcatcataagcgactttatt |
34883905 |
T |
|
| Q |
301 |
tcctctttaacctcatcatacagtttacgttcttcaaatgaaagttcaacataacaagtctcaacaatcttaggtggaagnnnnnnnaatgcagtgtctt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
34883906 |
tcctctttaacctcatcatacagtttacgttcttcaaatgaaagttcaacataacaagtctcaacaatcttaggtggaagcccccccaatgcagtgtctt |
34884005 |
T |
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| Q |
401 |
tggttcttcgcaatgatatcgccgacatcaaaacctacccaa |
442 |
Q |
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| T |
34884006 |
tggttcttcgcaatgatatcgccgacatcaaaacctacccaa |
34884047 |
T |
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