View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3799_low_12 (Length: 243)

Name: NF3799_low_12
Description: NF3799
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3799_low_12
NF3799_low_12
[»] chr8 (16 HSPs)
chr8 (1-152)||(7978804-7978955)
chr8 (156-227)||(7979104-7979175)
chr8 (189-229)||(37032587-37032627)
chr8 (188-227)||(11033415-11033454)
chr8 (189-220)||(30365127-30365158)
chr8 (192-227)||(43732679-43732714)
chr8 (189-227)||(3726860-3726898)
chr8 (189-227)||(31543281-31543319)
chr8 (190-227)||(2248450-2248487)
chr8 (192-225)||(12022354-12022387)
chr8 (190-227)||(43732896-43732933)
chr8 (192-220)||(6315066-6315094)
chr8 (190-226)||(8815139-8815175)
chr8 (192-220)||(8815357-8815385)
chr8 (192-220)||(9718695-9718723)
chr8 (190-226)||(31738633-31738669)
[»] chr7 (22 HSPs)
chr7 (190-227)||(28074317-28074354)
chr7 (189-227)||(39646466-39646504)
chr7 (192-228)||(48881757-48881793)
chr7 (192-227)||(1051707-1051742)
chr7 (192-227)||(36267762-36267797)
chr7 (192-227)||(37925841-37925876)
chr7 (192-227)||(39856074-39856109)
chr7 (189-227)||(13770945-13770983)
chr7 (185-227)||(33519257-33519299)
chr7 (189-227)||(47390852-47390890)
chr7 (186-227)||(13425114-13425155)
chr7 (190-227)||(25887190-25887227)
chr7 (193-226)||(31571680-31571713)
chr7 (189-226)||(33655318-33655355)
chr7 (190-227)||(36267551-36267588)
chr7 (190-219)||(38749576-38749605)
chr7 (190-227)||(40282195-40282232)
chr7 (190-227)||(41496955-41496992)
chr7 (190-227)||(48881556-48881593)
chr7 (185-225)||(13425285-13425325)
chr7 (195-227)||(31364253-31364285)
chr7 (192-220)||(37417839-37417867)
[»] chr6 (12 HSPs)
chr6 (189-227)||(15323222-15323260)
chr6 (189-227)||(15353361-15353399)
chr6 (192-227)||(4097235-4097270)
chr6 (192-227)||(10818229-10818264)
chr6 (192-227)||(14515473-14515508)
chr6 (190-220)||(1300627-1300657)
chr6 (185-219)||(10293243-10293277)
chr6 (190-220)||(31798916-31798946)
chr6 (190-219)||(12811197-12811226)
chr6 (190-227)||(14515680-14515717)
chr6 (189-226)||(21607054-21607091)
chr6 (195-227)||(9719034-9719066)
[»] chr5 (17 HSPs)
chr5 (190-228)||(8503037-8503075)
chr5 (190-227)||(5688599-5688636)
chr5 (190-227)||(14245255-14245292)
chr5 (190-227)||(16938477-16938514)
chr5 (188-227)||(10476237-10476276)
chr5 (192-227)||(13634711-13634746)
chr5 (188-227)||(13634920-13634959)
chr5 (192-227)||(14245088-14245123)
chr5 (192-227)||(15986833-15986868)
chr5 (192-227)||(20147079-20147114)
chr5 (189-219)||(4373783-4373813)
chr5 (185-227)||(14681463-14681505)
chr5 (192-225)||(16938690-16938723)
chr5 (190-227)||(40305668-40305705)
chr5 (192-220)||(9856890-9856918)
chr5 (192-220)||(26414893-26414921)
chr5 (192-220)||(40305881-40305909)
[»] chr3 (10 HSPs)
chr3 (190-228)||(37102347-37102385)
chr3 (189-220)||(34640999-34641030)
chr3 (196-226)||(12790377-12790407)
chr3 (198-227)||(16884180-16884209)
chr3 (190-219)||(54574573-54574602)
chr3 (192-220)||(651740-651768)
chr3 (188-220)||(5961984-5962016)
chr3 (188-220)||(18654596-18654628)
chr3 (195-227)||(21090280-21090312)
chr3 (192-220)||(24253721-24253749)
[»] chr2 (10 HSPs)
chr2 (189-227)||(35736172-35736210)
chr2 (190-227)||(17379844-17379881)
chr2 (190-227)||(36347750-36347787)
chr2 (192-226)||(17380051-17380085)
chr2 (189-227)||(22356213-22356251)
chr2 (190-220)||(40022361-40022391)
chr2 (189-227)||(42296512-42296550)
chr2 (190-227)||(16713734-16713771)
chr2 (195-224)||(19567028-19567057)
chr2 (187-227)||(23748304-23748344)
[»] chr1 (15 HSPs)
chr1 (190-228)||(26941041-26941079)
chr1 (189-227)||(32951527-32951565)
chr1 (190-227)||(30010330-30010367)
chr1 (185-226)||(41498397-41498438)
chr1 (192-227)||(12234010-12234045)
chr1 (192-227)||(26324014-26324049)
chr1 (188-227)||(38509890-38509929)
chr1 (189-227)||(1085699-1085737)
chr1 (190-219)||(525317-525346)
chr1 (189-226)||(2470727-2470764)
chr1 (190-227)||(20607221-20607258)
chr1 (190-227)||(40094931-40094968)
chr1 (187-227)||(12234219-12234259)
chr1 (192-228)||(41676314-41676350)
chr1 (192-220)||(51303384-51303412)
[»] chr4 (23 HSPs)
chr4 (188-225)||(26166933-26166970)
chr4 (190-227)||(49735701-49735738)
chr4 (190-227)||(54320643-54320680)
chr4 (189-226)||(55080576-55080613)
chr4 (189-225)||(45741887-45741923)
chr4 (192-227)||(1968568-1968603)
chr4 (192-227)||(37711138-37711173)
chr4 (189-220)||(41174353-41174384)
chr4 (192-227)||(49735468-49735503)
chr4 (192-227)||(54935067-54935102)
chr4 (192-227)||(56135749-56135784)
chr4 (192-226)||(5825106-5825140)
chr4 (186-220)||(22920975-22921009)
chr4 (186-220)||(22970790-22970824)
chr4 (189-227)||(37711332-37711370)
chr4 (190-227)||(46007910-46007947)
chr4 (190-227)||(54576538-54576575)
chr4 (190-227)||(54935278-54935315)
chr4 (188-220)||(5730826-5730858)
chr4 (189-225)||(17182696-17182732)
chr4 (190-226)||(27775581-27775617)
chr4 (192-220)||(54320435-54320463)
chr4 (188-220)||(56135937-56135969)
[»] scaffold0071 (1 HSPs)
scaffold0071 (189-219)||(52893-52923)
[»] scaffold0012 (1 HSPs)
scaffold0012 (190-220)||(184609-184639)
[»] scaffold0026 (1 HSPs)
scaffold0026 (192-225)||(1609-1642)
[»] scaffold0067 (1 HSPs)
scaffold0067 (189-225)||(39183-39219)


Alignment Details
Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 7978804 - 7978955
Alignment:
Q  1 gcaacttaaaactgcatttctctgcagggaaactcagaattttgcatagaaattacacccccgatcaactttaaatgtcatctggttttttattttcttc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7978804 gcaacttaaaactgcatttctctgcagggaaactcagaattttgcatagaaattacacccccgatcaactttaaatgtcatctggttttttattttcttc 7978903  T
Q  101 ctttatttccacccaaaacatccaaggtaagggacccacgatatctcagggg 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7978904 ctttatttccacccaaaacatccaaggtaagggacccacgatatctcagggg 7978955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 7979104 - 7979175
Alignment:
Q  156 atagaacatgaattagtccagtggcctctaacctttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||| |||||||| | |||||||| |||||||||||||||||||||| |||||||||    
T  7979104 atagaacatgaattagtccggtggcctccatcctttaggatgtgtttggattgagggtttagaagaggaagg 7979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 37032627 - 37032587
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaaggtg 229  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  37032627 tttagggtgtgtttggattgagggtttaggagagaaaggtg 37032587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 227
Target Start/End: Original strand, 11033415 - 11033454
Alignment:
Q  188 ctttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  11033415 ctttagggtgtgtttggattgagggtttagaagaggaagg 11033454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 220
Target Start/End: Original strand, 30365127 - 30365158
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggag 220  Q
    ||||||||||||||||||||||||||||||||    
T  30365127 tttagggtgtgtttggattgagggtttaggag 30365158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 43732679 - 43732714
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  43732679 agggtgtgtttggattgagggtttaggaggggaagg 43732714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 3726860 - 3726898
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  3726860 tttagggtgtgtttggatggagggtttaggaggggaagg 3726898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 31543319 - 31543281
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  31543319 tttagggtgtgtttcgattgagggtttaggaggggaagg 31543281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 2248450 - 2248487
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  2248450 ttagggtgtgtttggattgagagtttaggaggggaagg 2248487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 12022387 - 12022354
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaa 225  Q
    ||||||||||||||||||||||||||||| ||||    
T  12022387 agggtgtgtttggattgagggtttaggaggggaa 12022354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 43732933 - 43732896
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  43732933 ttagggtgtgtttggatggagggtttaggaggggaagg 43732896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Original strand, 6315066 - 6315094
Alignment:
Q  192 agggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||    
T  6315066 agggtgtgtttggattgagggtttaggag 6315094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 8815139 - 8815175
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaag 226  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  8815139 ttagggtgtgtttggatggagggtttaggaggggaag 8815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Complemental strand, 8815385 - 8815357
Alignment:
Q  192 agggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||    
T  8815385 agggtgtgtttggattgagggtttaggag 8815357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Complemental strand, 9718723 - 9718695
Alignment:
Q  192 agggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||    
T  9718723 agggtgtgtttggattgagggtttaggag 9718695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 31738669 - 31738633
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaag 226  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  31738669 ttagggtgtgtttggatggagggtttaggaggggaag 31738633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 28074354 - 28074317
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28074354 ttagggtgtgtttggattgagggtttaggagaggaagg 28074317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 39646466 - 39646504
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  39646466 tttagggtgtgtttggattgacggtttaggagaggaagg 39646504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 48881793 - 48881757
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaaggt 228  Q
    ||||||||||||||||||||||||||||| |||||||    
T  48881793 agggtgtgtttggattgagggtttaggaggggaaggt 48881757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 1051742 - 1051707
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  1051742 agggtgtgtttggattgagggtttaggaggggaagg 1051707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 36267797 - 36267762
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  36267797 agggtgtgtttggattgagggtttaggaggggaagg 36267762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 37925841 - 37925876
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37925841 agggtgtgtttggattgagggtttaggaggggaagg 37925876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 39856109 - 39856074
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  39856109 agggtgtgtttggattgagggtttaggaggggaagg 39856074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 13770945 - 13770983
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  13770945 tttagggtgtgtttggattgaggatttaggaggggaagg 13770983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 33519299 - 33519257
Alignment:
Q  185 aacctttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||    
T  33519299 aacccttagggtgtgtttggatggagggtttaggaggggaagg 33519257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 47390852 - 47390890
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  47390852 tttagggtgtgtttggattgaggggttaggaggggaagg 47390890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 13425114 - 13425155
Alignment:
Q  186 acctttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||| ||||||||||||||| ||||||||||||| ||||||    
T  13425114 accttaagggtgtgtttggatagagggtttaggaggggaagg 13425155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 25887190 - 25887227
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  25887190 ttagggtgtgtttggattgagggtttatgaggggaagg 25887227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Complemental strand, 31571713 - 31571680
Alignment:
Q  193 gggtgtgtttggattgagggtttaggagaggaag 226  Q
    |||||||||||||||||||||||||||| |||||    
T  31571713 gggtgtgtttggattgagggtttaggaggggaag 31571680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 33655355 - 33655318
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaag 226  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  33655355 tttagagtgtgtttggattgagggtttaggaggggaag 33655318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 36267551 - 36267588
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  36267551 ttagggtgtgtttggatggagggtttaggaggggaagg 36267588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 219
Target Start/End: Original strand, 38749576 - 38749605
Alignment:
Q  190 ttagggtgtgtttggattgagggtttagga 219  Q
    ||||||||||||||||||||||||||||||    
T  38749576 ttagggtgtgtttggattgagggtttagga 38749605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 40282195 - 40282232
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||| ||||||||||||||||||||||| ||||||    
T  40282195 ttagggtatgtttggattgagggtttaggaggggaagg 40282232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 41496955 - 41496992
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  41496955 ttagggtgtgtttggatggagggtttaggaggggaagg 41496992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 48881556 - 48881593
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  48881556 ttagggtgtgtttggatggagggtttaggaggggaagg 48881593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 13425325 - 13425285
Alignment:
Q  185 aacctttagggtgtgtttggattgagggtttaggagaggaa 225  Q
    |||||||||||||||||| |||| |||||||||||| ||||    
T  13425325 aacctttagggtgtgtttagatttagggtttaggaggggaa 13425285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 31364285 - 31364253
Alignment:
Q  195 gtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||||||||||||||| ||||||    
T  31364285 gtgtgtttggattgagggtttaggaggggaagg 31364253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Complemental strand, 37417867 - 37417839
Alignment:
Q  192 agggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||    
T  37417867 agggtgtgtttggattgagggtttaggag 37417839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000009; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 15323222 - 15323260
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  15323222 tttagggtgtgtttggattgagggtttaggaggggaagg 15323260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 15353361 - 15353399
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  15353361 tttagggtgtgtttggattgagggtttaggaggggaagg 15353399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 4097235 - 4097270
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  4097235 agggtgtgtttggattgagggtttaggaggggaagg 4097270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 10818229 - 10818264
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  10818229 agggtgtgtttggattgagggtttaggaggggaagg 10818264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 14515473 - 14515508
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  14515473 agggtgtgtttggattgagggtttaggaggggaagg 14515508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Original strand, 1300627 - 1300657
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||||    
T  1300627 ttagggtgtgtttggattgagggtttaggag 1300657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 10293243 - 10293277
Alignment:
Q  185 aacctttagggtgtgtttggattgagggtttagga 219  Q
    |||||||||||||||||||||||| ||||||||||    
T  10293243 aacctttagggtgtgtttggattgtgggtttagga 10293277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Original strand, 31798916 - 31798946
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||||    
T  31798916 ttagggtgtgtttggattgagggtttaggag 31798946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 219
Target Start/End: Complemental strand, 12811226 - 12811197
Alignment:
Q  190 ttagggtgtgtttggattgagggtttagga 219  Q
    ||||||||||||||||||||||||||||||    
T  12811226 ttagggtgtgtttggattgagggtttagga 12811197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 14515717 - 14515680
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  14515717 ttagggtgtgtttggatggagggtttaggaggggaagg 14515680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 21607091 - 21607054
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaag 226  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  21607091 tttagagtgtgtttggattgagggtttaggaggggaag 21607054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 9719034 - 9719066
Alignment:
Q  195 gtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||||||||||||||| ||||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagg 9719066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000009; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 8503075 - 8503037
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaaggt 228  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  8503075 ttagggtgtgtttggattgagggtttatgagaggaaggt 8503037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 5688636 - 5688599
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  5688636 ttagggtgtgtttggattgagggtttaggaggggaagg 5688599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 14245292 - 14245255
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  14245292 ttagggtgtgtttggattgagggtttaggaggggaagg 14245255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 16938477 - 16938514
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  16938477 ttagggtgtgtttggattgagggtttaggaggggaagg 16938514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 10476276 - 10476237
Alignment:
Q  188 ctttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  10476276 ctttagggtgtgtttggatggagggtttaggaggggaagg 10476237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 13634711 - 13634746
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  13634711 agggtgtgtttggattgagggtttaggaggggaagg 13634746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 13634959 - 13634920
Alignment:
Q  188 ctttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  13634959 ctttggggtgtgtttggattgagggtttaggaggggaagg 13634920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 14245088 - 14245123
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  14245088 agggtgtgtttggattgagggtttaggaggggaagg 14245123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 15986868 - 15986833
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  15986868 agggtgtgtttggattgagggtttaggaggggaagg 15986833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 20147114 - 20147079
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  20147114 agggtgtgtttggattgagggtttaggaggggaagg 20147079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 219
Target Start/End: Complemental strand, 4373813 - 4373783
Alignment:
Q  189 tttagggtgtgtttggattgagggtttagga 219  Q
    |||||||||||||||||||||||||||||||    
T  4373813 tttagggtgtgtttggattgagggtttagga 4373783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 14681463 - 14681505
Alignment:
Q  185 aacctttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||| || |||||||||||||||||||||||||| ||||||    
T  14681463 aaccttaagtgtgtgtttggattgagggtttaggaggggaagg 14681505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 16938723 - 16938690
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaa 225  Q
    ||||||||||||||| ||||||||||||||||||    
T  16938723 agggtgtgtttggatggagggtttaggagaggaa 16938690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 40305668 - 40305705
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  40305668 ttagggtgtgtttggatggagggtttaggaggggaagg 40305705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Original strand, 9856890 - 9856918
Alignment:
Q  192 agggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||    
T  9856890 agggtgtgtttggattgagggtttaggag 9856918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Original strand, 26414893 - 26414921
Alignment:
Q  192 agggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||    
T  26414893 agggtgtgtttggattgagggtttaggag 26414921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Complemental strand, 40305909 - 40305881
Alignment:
Q  192 agggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||    
T  40305909 agggtgtgtttggattgagggtttaggag 40305881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 37102385 - 37102347
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaaggt 228  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  37102385 ttagggtgtgtttggattgagggtttaggaggggaaggt 37102347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 220
Target Start/End: Original strand, 34640999 - 34641030
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggag 220  Q
    ||||||||||||||||||||||||||||||||    
T  34640999 tttagggtgtgtttggattgagggtttaggag 34641030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 226
Target Start/End: Original strand, 12790377 - 12790407
Alignment:
Q  196 tgtgtttggattgagggtttaggagaggaag 226  Q
    |||||||||||||||||||||||||||||||    
T  12790377 tgtgtttggattgagggtttaggagaggaag 12790407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 227
Target Start/End: Complemental strand, 16884209 - 16884180
Alignment:
Q  198 tgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||||    
T  16884209 tgtttggattgagggtttaggagaggaagg 16884180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 219
Target Start/End: Complemental strand, 54574602 - 54574573
Alignment:
Q  190 ttagggtgtgtttggattgagggtttagga 219  Q
    ||||||||||||||||||||||||||||||    
T  54574602 ttagggtgtgtttggattgagggtttagga 54574573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Original strand, 651740 - 651768
Alignment:
Q  192 agggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||    
T  651740 agggtgtgtttggattgagggtttaggag 651768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 5962016 - 5961984
Alignment:
Q  188 ctttagggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||| ||||||||||||||||    
T  5962016 ctttagggtgtgtttgtattgagggtttaggag 5961984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 18654596 - 18654628
Alignment:
Q  188 ctttagggtgtgtttggattgagggtttaggag 220  Q
    ||||||||||||||||||| |||||||||||||    
T  18654596 ctttagggtgtgtttggatggagggtttaggag 18654628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 21090312 - 21090280
Alignment:
Q  195 gtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||| |||||||||||||||||    
T  21090312 gtgtgtttggattgatggtttaggagaggaagg 21090280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Original strand, 24253721 - 24253749
Alignment:
Q  192 agggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||    
T  24253721 agggtgtgtttggattgagggtttaggag 24253749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 35736172 - 35736210
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  35736172 tttagggtgtgtttggattgagggtttaggaggggaagg 35736210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 17379844 - 17379881
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  17379844 ttagggtgtgtttggattgagggtttaggaggggaagg 17379881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 36347787 - 36347750
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  36347787 ttagggtgtgtttggattgagggtttaggaggggaagg 36347750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Complemental strand, 17380085 - 17380051
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaag 226  Q
    ||||||||||||||||||||||||||||| |||||    
T  17380085 agggtgtgtttggattgagggtttaggaggggaag 17380051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 22356251 - 22356213
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  22356251 tttagggtgtgtttggattgaggatttaggaggggaagg 22356213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Original strand, 40022361 - 40022391
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||||    
T  40022361 ttagggtgtgtttggattgagggtttaggag 40022391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 42296550 - 42296512
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  42296550 tttagggtgtgtttggattgagggattaggaggggaagg 42296512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 16713771 - 16713734
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  16713771 ttagggtgtgtttggatggagggtttaggaaaggaagg 16713734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 19567057 - 19567028
Alignment:
Q  195 gtgtgtttggattgagggtttaggagagga 224  Q
    ||||||||||||||||||||||||||||||    
T  19567057 gtgtgtttggattgagggtttaggagagga 19567028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 23748344 - 23748304
Alignment:
Q  187 cctttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||| ||||||||||||||| ||||||||||||| ||||||    
T  23748344 ccttaagggtgtgtttggatggagggtttaggaggggaagg 23748304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000009; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 228
Target Start/End: Complemental strand, 26941079 - 26941041
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaaggt 228  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  26941079 ttagggtgtgtttggattgagggtttaggaggggaaggt 26941041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 32951565 - 32951527
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  32951565 tttagggtgtgtttggattgagagtttaggagaggaagg 32951527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 30010330 - 30010367
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  30010330 ttagggtgtgtttggattgagggtttaggaggggaagg 30010367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 41498397 - 41498438
Alignment:
Q  185 aacctttagggtgtgtttggattgagggtttaggagaggaag 226  Q
    |||||| ||||||||||||||||||||||||||||| |||||    
T  41498397 aaccttaagggtgtgtttggattgagggtttaggaggggaag 41498438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 12234010 - 12234045
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  12234010 agggtgtgtttggattgagggtttaggaggggaagg 12234045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 26324014 - 26324049
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  26324014 agggtgtgtttggattgagggtttaggaggggaagg 26324049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 227
Target Start/End: Original strand, 38509890 - 38509929
Alignment:
Q  188 ctttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  38509890 ctttagggtgtgtttggatagagggtttaggaggggaagg 38509929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 1085737 - 1085699
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  1085737 tttagggtgtgtttggatagagggtttaggaggggaagg 1085699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 219
Target Start/End: Complemental strand, 525346 - 525317
Alignment:
Q  190 ttagggtgtgtttggattgagggtttagga 219  Q
    ||||||||||||||||||||||||||||||    
T  525346 ttagggtgtgtttggattgagggtttagga 525317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 2470727 - 2470764
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaag 226  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  2470727 tttagggtgtgtttggatggagggtttaggaggggaag 2470764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 20607221 - 20607258
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  20607221 ttagggtgtgtttgaattgagggtttaggaggggaagg 20607258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 40094931 - 40094968
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  40094931 ttagggtgtgtttggatggagggtttaggaggggaagg 40094968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 12234259 - 12234219
Alignment:
Q  187 cctttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||| ||||||||||||| ||||||||||||| ||||||    
T  12234259 cctttatggtgtgtttggatggagggtttaggaggggaagg 12234219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 41676314 - 41676350
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaaggt 228  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  41676314 agggtgtgtttgaattgagggtctaggagaggaaggt 41676350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Original strand, 51303384 - 51303412
Alignment:
Q  192 agggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||    
T  51303384 agggtgtgtttggattgagggtttaggag 51303412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 225
Target Start/End: Original strand, 26166933 - 26166970
Alignment:
Q  188 ctttagggtgtgtttggattgagggtttaggagaggaa 225  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26166933 ctttagggtgtgtttggattgagggtttaggaggggaa 26166970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 49735738 - 49735701
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  49735738 ttagggtgtgtttggattgagggtttaggaggggaagg 49735701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 54320680 - 54320643
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  54320680 ttagggtgtgtttggattgagggtttaggaggggaagg 54320643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 226
Target Start/End: Original strand, 55080576 - 55080613
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaag 226  Q
    |||| |||||||||||||||||||||||||||||||||    
T  55080576 tttatggtgtgtttggattgagggtttaggagaggaag 55080613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 45741887 - 45741923
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaa 225  Q
    |||||||||||||||||||||||||||||||| ||||    
T  45741887 tttagggtgtgtttggattgagggtttaggaggggaa 45741923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 1968603 - 1968568
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  1968603 agggtgtgtttggattgagggtttaggaggggaagg 1968568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 37711138 - 37711173
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37711138 agggtgtgtttggattgagggtttaggaggggaagg 37711173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 220
Target Start/End: Original strand, 41174353 - 41174384
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggag 220  Q
    ||||||||||||||||||||||||||||||||    
T  41174353 tttagggtgtgtttggattgagggtttaggag 41174384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 49735468 - 49735503
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  49735468 agggtgtgtttggattgagggtttaggaggggaagg 49735503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 54935067 - 54935102
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  54935067 agggtgtgtttggattgagggtttaggaggggaagg 54935102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 56135749 - 56135784
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||||||||||||||| ||||||    
T  56135749 agggtgtgtttggattgagggtttaggaggggaagg 56135784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Complemental strand, 5825140 - 5825106
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaag 226  Q
    ||||||||||||||| |||||||||||||||||||    
T  5825140 agggtgtgtttggatggagggtttaggagaggaag 5825106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 22920975 - 22921009
Alignment:
Q  186 acctttagggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||| ||||||||||    
T  22920975 acctttagggtgtgtttggattgatggtttaggag 22921009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Complemental strand, 22970824 - 22970790
Alignment:
Q  186 acctttagggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||| ||||||||||    
T  22970824 acctttagggtgtgtttggattgatggtttaggag 22970790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 37711370 - 37711332
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  37711370 tttagggtgtgtttggatggagggtttaggaggggaagg 37711332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 46007947 - 46007910
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  46007947 ttagagtgtgtttggattgagggtttaggaggggaagg 46007910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 54576575 - 54576538
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  54576575 ttagggtgtgtttggattaagggtttaagagaggaagg 54576538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 54935315 - 54935278
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaagg 227  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  54935315 ttagggtgtgtttggatggagggtttaggaggggaagg 54935278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 5730826 - 5730858
Alignment:
Q  188 ctttagggtgtgtttggattgagggtttaggag 220  Q
    ||||||||||||||||||| |||||||||||||    
T  5730826 ctttagggtgtgtttggatggagggtttaggag 5730858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 17182732 - 17182696
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaa 225  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  17182732 tttagggtgtgtttggattgagggtttatgaggggaa 17182696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 27775581 - 27775617
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggagaggaag 226  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  27775581 ttagggtttgtttggattgagggtttaggaggggaag 27775617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Original strand, 54320435 - 54320463
Alignment:
Q  192 agggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||    
T  54320435 agggtgtgtttggattgagggtttaggag 54320463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 56135969 - 56135937
Alignment:
Q  188 ctttagggtgtgtttggattgagggtttaggag 220  Q
    ||||||||||||||||||| |||||||||||||    
T  56135969 ctttagggtgtgtttggatggagggtttaggag 56135937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 219
Target Start/End: Original strand, 52893 - 52923
Alignment:
Q  189 tttagggtgtgtttggattgagggtttagga 219  Q
    |||||||||||||||||||||||||||||||    
T  52893 tttagggtgtgtttggattgagggtttagga 52923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 220
Target Start/End: Original strand, 184609 - 184639
Alignment:
Q  190 ttagggtgtgtttggattgagggtttaggag 220  Q
    |||||||||||||||||||||||||||||||    
T  184609 ttagggtgtgtttggattgagggtttaggag 184639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 1642 - 1609
Alignment:
Q  192 agggtgtgtttggattgagggtttaggagaggaa 225  Q
    |||||||||||| |||||||||||||||||||||    
T  1642 agggtgtgtttgaattgagggtttaggagaggaa 1609  T

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Target: scaffold0067 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 39183 - 39219
Alignment:
Q  189 tttagggtgtgtttggattgagggtttaggagaggaa 225  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  39183 tttagggtgtgtttggatggagggtttaggaggggaa 39219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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