View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3802_high_1 (Length: 566)

Name: NF3802_high_1
Description: NF3802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3802_high_1
NF3802_high_1
[»] chr1 (73 HSPs)
chr1 (270-535)||(50767465-50767747)
chr1 (1-269)||(20302198-20302467)
chr1 (3-269)||(51752104-51752371)
chr1 (1-269)||(13761577-13761845)
chr1 (1-269)||(51749778-51750047)
chr1 (1-269)||(10400101-10400369)
chr1 (1-241)||(6823651-6823893)
chr1 (1-236)||(15823319-15823554)
chr1 (1-236)||(28842266-28842503)
chr1 (1-236)||(28840451-28840688)
chr1 (1-236)||(13214854-13215089)
chr1 (1-269)||(6822775-6823023)
chr1 (1-212)||(41646717-41646928)
chr1 (1-162)||(28207339-28207500)
chr1 (1-236)||(3579889-3580126)
chr1 (1-149)||(47451508-47451656)
chr1 (71-261)||(16225895-16226083)
chr1 (7-216)||(30790673-30790882)
chr1 (71-269)||(47177078-47177274)
chr1 (127-269)||(47179428-47179570)
chr1 (3-142)||(38925753-38925892)
chr1 (4-217)||(39462310-39462524)
chr1 (4-144)||(14098246-14098385)
chr1 (131-269)||(23783238-23783376)
chr1 (164-270)||(20291279-20291386)
chr1 (1-89)||(16231521-16231609)
chr1 (57-144)||(49687405-49687492)
chr1 (1-89)||(16226087-16226175)
chr1 (152-241)||(16231369-16231458)
chr1 (1-76)||(20291390-20291465)
chr1 (1-89)||(47177278-47177370)
chr1 (1-89)||(47179629-47179721)
chr1 (1-65)||(2617460-2617524)
chr1 (1-66)||(49495472-49495537)
chr1 (83-166)||(23783362-23783444)
chr1 (1-66)||(28998526-28998591)
chr1 (1-66)||(29004242-29004307)
chr1 (1-65)||(14183859-14183923)
chr1 (4-64)||(25251551-25251611)
chr1 (1-116)||(42922126-42922242)
chr1 (179-269)||(47451405-47451495)
chr1 (1-64)||(25248787-25248850)
chr1 (4-66)||(18800845-18800907)
chr1 (4-65)||(11457751-11457812)
chr1 (17-66)||(24325599-24325648)
chr1 (1-65)||(17186401-17186465)
chr1 (1-65)||(50079094-50079158)
chr1 (1-64)||(17318838-17318901)
chr1 (1-64)||(18307054-18307117)
chr1 (27-66)||(23783494-23783533)
chr1 (17-63)||(15295137-15295183)
chr1 (1-63)||(21948460-21948526)
chr1 (1-66)||(31423147-31423212)
chr1 (1-63)||(39932017-39932081)
chr1 (4-65)||(50248848-50248909)
chr1 (1-66)||(2510597-2510666)
chr1 (1-65)||(18839531-18839595)
chr1 (1-65)||(31489859-31489923)
chr1 (170-236)||(49687334-49687400)
chr1 (2-65)||(50076946-50077009)
chr1 (4-66)||(6995976-6996038)
chr1 (1-66)||(8347542-8347607)
chr1 (187-236)||(38925915-38925965)
chr1 (1-66)||(2949504-2949569)
chr1 (2-66)||(9241359-9241424)
chr1 (127-176)||(13449947-13449996)
chr1 (1-66)||(16428596-16428661)
chr1 (7-89)||(26613517-26613601)
chr1 (13-66)||(48665114-48665167)
chr1 (1-64)||(8349321-8349385)
chr1 (14-66)||(16431044-16431096)
chr1 (1-65)||(17324009-17324073)
chr1 (1-65)||(50307820-50307884)
[»] chr2 (49 HSPs)
chr2 (1-261)||(27104523-27104783)
chr2 (3-261)||(19502284-19502542)
chr2 (1-270)||(19504616-19504885)
chr2 (1-269)||(24162483-24162752)
chr2 (1-236)||(42064264-42064499)
chr2 (1-236)||(21520964-21521201)
chr2 (1-177)||(13910315-13910491)
chr2 (3-236)||(6259088-6259321)
chr2 (1-236)||(22407680-22407915)
chr2 (1-236)||(40032329-40032553)
chr2 (1-158)||(22287607-22287764)
chr2 (83-269)||(36559173-36559358)
chr2 (4-145)||(6264419-6264560)
chr2 (4-145)||(43623842-43623982)
chr2 (131-269)||(36561539-36561677)
chr2 (122-269)||(45332528-45332675)
chr2 (1-114)||(18800573-18800686)
chr2 (152-261)||(43623968-43624077)
chr2 (4-118)||(12342684-12342798)
chr2 (17-175)||(35107110-35107268)
chr2 (1-66)||(45280256-45280321)
chr2 (1-66)||(42452702-42452767)
chr2 (2-65)||(22163219-22163282)
chr2 (83-166)||(36561450-36561532)
chr2 (1-66)||(37963198-37963263)
chr2 (1-65)||(19007560-19007624)
chr2 (1-65)||(31733036-31733100)
chr2 (22-77)||(45332384-45332439)
chr2 (152-217)||(6264546-6264611)
chr2 (1-65)||(17849037-17849101)
chr2 (22-66)||(36559067-36559111)
chr2 (22-66)||(36561344-36561388)
chr2 (131-166)||(36561518-36561553)
chr2 (37-95)||(28462593-28462651)
chr2 (1-62)||(3022086-3022147)
chr2 (22-106)||(20147040-20147125)
chr2 (1-66)||(22874061-22874126)
chr2 (4-65)||(28196557-28196618)
chr2 (1-66)||(5377700-5377769)
chr2 (1-65)||(11578375-11578439)
chr2 (1-65)||(11739831-11739895)
chr2 (1-65)||(14837193-14837257)
chr2 (1-66)||(42923780-42923847)
chr2 (1-64)||(15539746-15539809)
chr2 (35-114)||(45156922-45157001)
chr2 (37-123)||(35028440-35028527)
chr2 (1-66)||(23452508-23452577)
chr2 (3-55)||(34979852-34979904)
chr2 (17-116)||(40699178-40699278)
[»] chr4 (77 HSPs)
chr4 (1-267)||(51015042-51015308)
chr4 (1-261)||(24888598-24888858)
chr4 (1-269)||(9174417-9174684)
chr4 (1-267)||(22803005-22803270)
chr4 (1-261)||(37089642-37089906)
chr4 (37-269)||(11006548-11006781)
chr4 (1-269)||(36919856-36920125)
chr4 (1-236)||(22044661-22044897)
chr4 (4-269)||(38408993-38409264)
chr4 (1-232)||(31849870-31850101)
chr4 (3-269)||(5637738-5638006)
chr4 (1-272)||(36921765-36922036)
chr4 (1-217)||(5198266-5198482)
chr4 (1-236)||(48486146-48486381)
chr4 (37-269)||(3824880-3825112)
chr4 (1-269)||(11434769-11435017)
chr4 (70-269)||(9176836-9177035)
chr4 (1-238)||(40091686-40091923)
chr4 (1-216)||(24878836-24879051)
chr4 (1-215)||(619718-619932)
chr4 (1-236)||(9148087-9148315)
chr4 (1-182)||(22046956-22047135)
chr4 (12-215)||(24880299-24880502)
chr4 (1-143)||(47274647-47274789)
chr4 (1-269)||(7941133-7941383)
chr4 (70-212)||(11008932-11009075)
chr4 (122-269)||(16932213-16932360)
chr4 (1-145)||(22801133-22801276)
chr4 (1-269)||(18846923-18847215)
chr4 (122-271)||(22783170-22783319)
chr4 (127-271)||(16934572-16934716)
chr4 (1-164)||(52942717-52942881)
chr4 (122-269)||(22780805-22780952)
chr4 (7-159)||(8756527-8756679)
chr4 (1-89)||(16934414-16934502)
chr4 (1-66)||(44600109-44600174)
chr4 (1-77)||(9176745-9176821)
chr4 (1-89)||(16932060-16932148)
chr4 (1-66)||(6764836-6764901)
chr4 (152-236)||(22801262-22801346)
chr4 (1-66)||(40637071-40637136)
chr4 (1-66)||(17662505-17662574)
chr4 (1-64)||(33415758-33415821)
chr4 (1-66)||(47868398-47868463)
chr4 (1-66)||(8631690-8631759)
chr4 (1-66)||(14787702-14787769)
chr4 (1-65)||(19095880-19095944)
chr4 (1-65)||(24446850-24446914)
chr4 (1-64)||(37313337-37313400)
chr4 (1-66)||(2485143-2485209)
chr4 (7-65)||(18537748-18537806)
chr4 (186-236)||(22048492-22048542)
chr4 (1-66)||(36378289-36378354)
chr4 (1-66)||(24348211-24348280)
chr4 (2-65)||(12396117-12396180)
chr4 (2-65)||(12401079-12401142)
chr4 (1-64)||(56030443-56030506)
chr4 (4-66)||(5100994-5101056)
chr4 (4-66)||(14633317-14633378)
chr4 (1-55)||(19322705-19322759)
chr4 (17-104)||(25357595-25357683)
chr4 (3-65)||(38928451-38928513)
chr4 (3-61)||(41997494-41997552)
chr4 (1-66)||(15032807-15032872)
chr4 (1-66)||(16453306-16453371)
chr4 (1-65)||(3937480-3937543)
chr4 (37-89)||(11008877-11008929)
chr4 (1-65)||(38270257-38270321)
chr4 (11-66)||(16186118-16186173)
chr4 (1-65)||(2891314-2891379)
chr4 (127-176)||(16689331-16689380)
chr4 (17-66)||(22134917-22134966)
chr4 (172-236)||(52942910-52942974)
chr4 (127-175)||(8529012-8529060)
chr4 (13-65)||(12102088-12102140)
chr4 (17-89)||(40999234-40999306)
chr4 (37-89)||(52043737-52043789)
[»] chr3 (88 HSPs)
chr3 (1-269)||(22114574-22114842)
chr3 (1-268)||(5191374-5191641)
chr3 (1-269)||(18099439-18099707)
chr3 (1-236)||(1321194-1321429)
chr3 (1-236)||(5522884-5523119)
chr3 (1-236)||(26720301-26720536)
chr3 (1-210)||(10956296-10956505)
chr3 (1-270)||(32264308-32264581)
chr3 (1-167)||(3859350-3859516)
chr3 (1-236)||(11162924-11163138)
chr3 (1-269)||(35777163-35777409)
chr3 (70-269)||(6063808-6064006)
chr3 (1-176)||(10958592-10958767)
chr3 (1-236)||(11170178-11170392)
chr3 (1-269)||(18097169-18097422)
chr3 (1-176)||(45882752-45882927)
chr3 (70-252)||(5899476-5899657)
chr3 (7-236)||(24177032-24177261)
chr3 (122-270)||(50493675-50493823)
chr3 (122-269)||(38210067-38210214)
chr3 (2-144)||(48361940-48362082)
chr3 (140-253)||(10192401-10192513)
chr3 (128-269)||(53896613-53896754)
chr3 (70-269)||(5885983-5886182)
chr3 (22-146)||(10191603-10191727)
chr3 (1-144)||(24979552-24979695)
chr3 (1-146)||(10084658-10084807)
chr3 (70-212)||(25388654-25388795)
chr3 (140-253)||(10085481-10085593)
chr3 (15-145)||(18162508-18162639)
chr3 (1-143)||(32218941-32219083)
chr3 (1-102)||(15780747-15780848)
chr3 (152-270)||(38889756-38889875)
chr3 (1-146)||(6066065-6066210)
chr3 (3-104)||(12268237-12268338)
chr3 (1-89)||(6063715-6063805)
chr3 (1-89)||(38889939-38890028)
chr3 (152-269)||(6719532-6719651)
chr3 (1-66)||(4308550-4308615)
chr3 (1-89)||(50493899-50493987)
chr3 (186-269)||(7606880-7606963)
chr3 (11-89)||(53896475-53896553)
chr3 (1-66)||(35918218-35918283)
chr3 (1-66)||(51727275-51727340)
chr3 (70-145)||(38889861-38889936)
chr3 (1-66)||(43226009-43226074)
chr3 (2-66)||(1313333-1313397)
chr3 (17-89)||(6719396-6719468)
chr3 (1-116)||(28761697-28761813)
chr3 (152-211)||(6066195-6066254)
chr3 (70-145)||(6719471-6719546)
chr3 (1-64)||(27635896-27635959)
chr3 (3-66)||(43228214-43228277)
chr3 (1-64)||(51675024-51675087)
chr3 (1-55)||(6561744-6561798)
chr3 (1-66)||(53915765-53915830)
chr3 (1-65)||(1626952-1627016)
chr3 (1-66)||(13420441-13420506)
chr3 (1-66)||(53597164-53597228)
chr3 (35-95)||(13893287-13893347)
chr3 (2-66)||(23633383-23633447)
chr3 (1-65)||(28137564-28137628)
chr3 (1-65)||(43423732-43423796)
chr3 (1-65)||(47701864-47701928)
chr3 (3-65)||(880723-880785)
chr3 (221-271)||(3859315-3859365)
chr3 (32-78)||(5886196-5886242)
chr3 (7-65)||(28180948-28181006)
chr3 (4-66)||(51943294-51943356)
chr3 (4-66)||(53917936-53917998)
chr3 (32-89)||(5899660-5899717)
chr3 (1-66)||(6484308-6484373)
chr3 (37-114)||(46966940-46967017)
chr3 (1-65)||(3314608-3314672)
chr3 (1-66)||(4104164-4104233)
chr3 (1-65)||(5927033-5927097)
chr3 (37-89)||(25388798-25388850)
chr3 (1-65)||(28100310-28100374)
chr3 (1-65)||(53468724-53468788)
chr3 (1-64)||(3306724-3306787)
chr3 (2-65)||(36011751-36011814)
chr3 (1-64)||(43421684-43421747)
chr3 (4-66)||(4560537-4560599)
chr3 (2-64)||(6231374-6231436)
chr3 (3-65)||(53591119-53591181)
chr3 (127-176)||(4308676-4308725)
chr3 (1-65)||(890040-890104)
chr3 (1-65)||(28102271-28102335)
[»] chr5 (78 HSPs)
chr5 (1-236)||(38881878-38882114)
chr5 (3-261)||(4236378-4236635)
chr5 (1-236)||(16775930-16776166)
chr5 (1-270)||(25921744-25921993)
chr5 (1-269)||(2174680-2174927)
chr5 (1-236)||(21947803-21948034)
chr5 (1-269)||(31544798-31545088)
chr5 (74-269)||(34477438-34477632)
chr5 (37-178)||(21684768-21684909)
chr5 (39-269)||(39797849-39798058)
chr5 (1-236)||(20507733-20507968)
chr5 (83-269)||(31542442-31542628)
chr5 (83-269)||(10749505-10749690)
chr5 (1-125)||(2818607-2818731)
chr5 (1-144)||(36402599-36402741)
chr5 (83-269)||(10756960-10757145)
chr5 (83-269)||(15354880-15355065)
chr5 (83-269)||(15357156-15357341)
chr5 (152-269)||(34479855-34479972)
chr5 (1-144)||(12556194-12556337)
chr5 (4-141)||(31466252-31466389)
chr5 (4-144)||(6756359-6756499)
chr5 (83-270)||(23664833-23665019)
chr5 (83-270)||(23793568-23793754)
chr5 (83-269)||(23667109-23667294)
chr5 (1-89)||(31542655-31542743)
chr5 (122-212)||(31179807-31179897)
chr5 (152-236)||(659746-659829)
chr5 (152-269)||(38960487-38960604)
chr5 (1-66)||(31179642-31179707)
chr5 (134-214)||(659850-659929)
chr5 (1-66)||(10529370-10529435)
chr5 (171-271)||(18186489-18186589)
chr5 (1-66)||(39854427-39854491)
chr5 (7-66)||(26097676-26097735)
chr5 (3-65)||(20042994-20043056)
chr5 (7-65)||(36208524-36208582)
chr5 (152-236)||(2818729-2818813)
chr5 (21-66)||(3373332-3373377)
chr5 (1-66)||(18596590-18596655)
chr5 (1-66)||(4410000-4410069)
chr5 (1-65)||(17072827-17072891)
chr5 (1-65)||(20044954-20045018)
chr5 (22-66)||(23665081-23665125)
chr5 (22-66)||(23793462-23793506)
chr5 (1-65)||(25904047-25904111)
chr5 (25-66)||(15354777-15354818)
chr5 (25-66)||(15357053-15357094)
chr5 (1-66)||(26098522-26098587)
chr5 (1-66)||(40221465-40221530)
chr5 (133-236)||(20504316-20504419)
chr5 (205-269)||(21684905-21684969)
chr5 (22-66)||(23667356-23667400)
chr5 (22-66)||(23742057-23742101)
chr5 (22-66)||(38960334-38960378)
chr5 (1-60)||(6661453-6661512)
chr5 (164-269)||(31466391-31466496)
chr5 (28-66)||(10757207-10757245)
chr5 (3-65)||(34530939-34531001)
chr5 (1-55)||(18511483-18511539)
chr5 (1-66)||(41585977-41586042)
chr5 (2-62)||(10474595-10474655)
chr5 (1-66)||(18468950-18469019)
chr5 (37-89)||(29748261-29748313)
chr5 (37-89)||(34477379-34477431)
chr5 (1-63)||(18509589-18509652)
chr5 (171-269)||(36402747-36402845)
chr5 (7-66)||(37706057-37706116)
chr5 (1-64)||(18466625-18466692)
chr5 (3-65)||(24126800-24126862)
chr5 (29-66)||(10749730-10749767)
chr5 (127-176)||(39854317-39854366)
chr5 (127-176)||(42238047-42238096)
chr5 (128-176)||(1240171-1240219)
chr5 (120-176)||(4409890-4409946)
chr5 (221-269)||(31179885-31179933)
chr5 (1-65)||(31472884-31472948)
chr5 (37-89)||(34479740-34479792)
[»] chr6 (49 HSPs)
chr6 (1-269)||(14507446-14507716)
chr6 (1-236)||(19227679-19227915)
chr6 (4-261)||(11983303-11983558)
chr6 (1-236)||(8995288-8995522)
chr6 (1-236)||(9019735-9019969)
chr6 (1-236)||(15530393-15530628)
chr6 (1-186)||(30729099-30729284)
chr6 (122-269)||(26068735-26068882)
chr6 (83-269)||(33308685-33308870)
chr6 (83-269)||(33310954-33311139)
chr6 (1-186)||(15532952-15533137)
chr6 (1-186)||(15541411-15541596)
chr6 (122-269)||(26066464-26066611)
chr6 (83-269)||(29755094-29755279)
chr6 (1-144)||(1072148-1072291)
chr6 (74-212)||(4816612-4816749)
chr6 (1-144)||(32279897-32280039)
chr6 (1-66)||(12195786-12195851)
chr6 (70-168)||(24192635-24192733)
chr6 (1-66)||(28241592-28241657)
chr6 (1-55)||(14459036-14459090)
chr6 (70-168)||(24191538-24191636)
chr6 (1-66)||(1230520-1230585)
chr6 (21-89)||(26066319-26066387)
chr6 (21-89)||(26068590-26068658)
chr6 (1-66)||(17852520-17852585)
chr6 (1-65)||(13057173-13057237)
chr6 (1-65)||(24338719-24338783)
chr6 (1-65)||(32447587-32447651)
chr6 (1-88)||(15346347-15346434)
chr6 (17-66)||(29754983-29755032)
chr6 (5-65)||(3630139-3630199)
chr6 (1-65)||(25477253-25477317)
chr6 (7-66)||(3028127-3028186)
chr6 (1-66)||(3390357-3390422)
chr6 (1-89)||(20915627-20915717)
chr6 (127-176)||(26084818-26084867)
chr6 (37-89)||(4816552-4816604)
chr6 (7-89)||(12186345-12186429)
chr6 (2-65)||(3234003-3234065)
chr6 (17-60)||(19704862-19704905)
chr6 (1-63)||(3632209-3632271)
chr6 (32-66)||(33308932-33308966)
chr6 (32-66)||(33311201-33311235)
chr6 (1-116)||(15366963-15367086)
chr6 (17-66)||(26932857-26932906)
chr6 (1-65)||(13039733-13039797)
chr6 (22-66)||(18318004-18318048)
chr6 (1-65)||(22490618-22490682)
[»] scaffold0250 (1 HSPs)
scaffold0250 (1-228)||(2670-2897)
[»] chr8 (44 HSPs)
chr8 (1-236)||(27826815-27827050)
chr8 (1-236)||(27829126-27829361)
chr8 (1-236)||(12517295-12517532)
chr8 (1-261)||(14807556-14807815)
chr8 (1-269)||(15072506-15072774)
chr8 (1-261)||(15067785-15068045)
chr8 (1-269)||(18812668-18812957)
chr8 (1-269)||(44720617-44720907)
chr8 (2-145)||(4423938-4424081)
chr8 (1-269)||(18810483-18810772)
chr8 (122-269)||(43079347-43079494)
chr8 (1-166)||(28251838-28252002)
chr8 (130-269)||(43081722-43081861)
chr8 (1-145)||(3886189-3886336)
chr8 (2-143)||(2468370-2468511)
chr8 (151-236)||(28252008-28252093)
chr8 (1-113)||(13858755-13858868)
chr8 (1-116)||(14419462-14419578)
chr8 (160-241)||(3886330-3886412)
chr8 (1-66)||(181536-181601)
chr8 (152-236)||(4423868-4423952)
chr8 (1-66)||(26775200-26775265)
chr8 (1-66)||(43530123-43530192)
chr8 (1-65)||(14477276-14477340)
chr8 (1-65)||(33541659-33541723)
chr8 (1-65)||(35872649-35872713)
chr8 (1-66)||(1225165-1225230)
chr8 (1-66)||(27911014-27911079)
chr8 (1-66)||(27957433-27957498)
chr8 (1-66)||(41382672-41382737)
chr8 (1-66)||(41384744-41384808)
chr8 (1-109)||(5623009-5623117)
chr8 (37-109)||(17847484-17847556)
chr8 (1-65)||(21482322-21482386)
chr8 (1-65)||(25952521-25952585)
chr8 (1-65)||(27107168-27107232)
chr8 (11-66)||(31162212-31162267)
chr8 (17-66)||(22684953-22685002)
chr8 (1-66)||(32339304-32339373)
chr8 (1-64)||(36865538-36865602)
chr8 (1-66)||(15185981-15186046)
chr8 (22-66)||(6375988-6376032)
chr8 (1-66)||(15809214-15809283)
chr8 (1-65)||(30480774-30480838)
[»] chr7 (65 HSPs)
chr7 (1-270)||(27306500-27306768)
chr7 (1-236)||(35412-35647)
chr7 (1-236)||(44347-44582)
chr7 (1-269)||(3878322-3878595)
chr7 (4-232)||(25542317-25542545)
chr7 (1-236)||(18567396-18567631)
chr7 (1-236)||(31435318-31435553)
chr7 (1-145)||(1049566-1049710)
chr7 (122-269)||(1047356-1047503)
chr7 (1-269)||(40837013-40837261)
chr7 (1-173)||(22392319-22392491)
chr7 (83-269)||(9027502-9027687)
chr7 (1-269)||(26804345-26804587)
chr7 (122-269)||(2935070-2935217)
chr7 (83-269)||(22136878-22137063)
chr7 (83-269)||(40551905-40552090)
chr7 (83-269)||(22107867-22108052)
chr7 (83-269)||(40549627-40549812)
chr7 (1-89)||(31156182-31156271)
chr7 (1-116)||(7188445-7188561)
chr7 (3-81)||(22251815-22251893)
chr7 (155-236)||(1049699-1049780)
chr7 (17-66)||(1606423-1606472)
chr7 (1-66)||(13099747-13099812)
chr7 (1-66)||(42331270-42331335)
chr7 (1-65)||(21678020-21678084)
chr7 (22-66)||(22108114-22108158)
chr7 (22-66)||(22137125-22137169)
chr7 (22-66)||(40549874-40549918)
chr7 (22-66)||(40552152-40552196)
chr7 (39-182)||(42006404-42006545)
chr7 (1-63)||(7092446-7092512)
chr7 (1-55)||(7094693-7094751)
chr7 (4-65)||(25276095-25276156)
chr7 (22-66)||(9027396-9027440)
chr7 (1-65)||(11355212-11355276)
chr7 (1-65)||(20137380-20137444)
chr7 (1-65)||(21679981-21680045)
chr7 (23-66)||(2935306-2935349)
chr7 (7-66)||(20091818-20091877)
chr7 (3-66)||(22828906-22828969)
chr7 (1-64)||(37412399-37412462)
chr7 (39-114)||(45366451-45366526)
chr7 (17-66)||(1849918-1849967)
chr7 (1-65)||(4296206-4296271)
chr7 (1-63)||(7470293-7470359)
chr7 (1-63)||(7472251-7472317)
chr7 (1-66)||(3035670-3035739)
chr7 (1-66)||(11757177-11757246)
chr7 (1-66)||(20299407-20299476)
chr7 (1-64)||(24465503-24465567)
chr7 (1-65)||(24748548-24748612)
chr7 (1-66)||(38393935-38394004)
chr7 (1-65)||(39146258-39146322)
chr7 (1-65)||(44724533-44724597)
chr7 (1-64)||(3677235-3677297)
chr7 (1-64)||(21990106-21990168)
chr7 (1-44)||(24258438-24258481)
chr7 (7-66)||(30906327-30906386)
chr7 (4-66)||(443548-443610)
chr7 (127-176)||(40946167-40946216)
chr7 (1-66)||(20297311-20297380)
chr7 (4-32)||(21592417-21592445)
chr7 (1-66)||(40946277-40946346)
chr7 (1-66)||(48457602-48457671)
[»] scaffold0131 (1 HSPs)
scaffold0131 (4-268)||(14768-15033)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-261)||(69562-69825)
scaffold0025 (1-261)||(73294-73536)
[»] scaffold0068 (2 HSPs)
scaffold0068 (37-178)||(29001-29142)
scaffold0068 (205-269)||(28941-29005)
[»] scaffold0127 (1 HSPs)
scaffold0127 (122-269)||(12907-13054)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-269)||(5927-6216)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-143)||(3872-4014)
[»] scaffold0140 (4 HSPs)
scaffold0140 (83-269)||(21915-22100)
scaffold0140 (83-269)||(24190-24375)
scaffold0140 (22-66)||(22162-22206)
scaffold0140 (22-66)||(24437-24481)
[»] scaffold0552 (1 HSPs)
scaffold0552 (1-66)||(1102-1167)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-66)||(41754-41819)
[»] scaffold0224 (1 HSPs)
scaffold0224 (1-116)||(16089-16205)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-66)||(51961-52028)
scaffold0005 (4-66)||(183914-183975)
[»] scaffold0154 (1 HSPs)
scaffold0154 (5-66)||(11748-11809)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-63)||(79140-79202)
[»] scaffold0133 (1 HSPs)
scaffold0133 (7-55)||(4777-4825)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-65)||(79812-79876)
[»] scaffold0057 (1 HSPs)
scaffold0057 (7-64)||(16924-16981)
[»] scaffold0511 (1 HSPs)
scaffold0511 (22-66)||(1988-2032)


Alignment Details
Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 270 - 535
Target Start/End: Complemental strand, 50767747 - 50767465
Alignment:
Q  270 ttaattaacttttatatagttagagaaagatgtttgtgaatttacnnnnnnnctactaatgtaacatgttatgacggtatcccttgtga----------- 358  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||||               
T  50767747 ttaattaacttttatatagttagagaaagatgtttgtgaatttacaaaaaaactagtaatgtaacatgttatgacggtatcccttgtgaaggcgtcctga 50767648  T
Q  359 ------tatttttcatgaatatttcgtccttattccatttgtcttttgttttcatctgtacaatttaaaaatgcaccatctatctcattccattcattca 452  Q
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50767647 gagagatatttttcatgaatatttcgtccttattccatttgtcttttgttttcatctgtacaatttaaaaatgcaccatctatctcattccattcattca 50767548  T
Q  453 tatttcattatccacaccaggccacttcatgaatgatgtaagctcccactccacctcatttcattcaatctcattcctgttac 535  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50767547 tatttcattatccacaccaggccacttcatgaatgatgtaagctcccactccacctcatttcattcaatctcattcctgttac 50767465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 20302467 - 20302198
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||||||    
T  20302467 cccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttataataaaagtttcacttaaaatttggaacaaatatgcacccaaa 20302368  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctca-aaaactgaaacct 199  Q
    ||||||||| ||||||| || |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  20302367 aatatgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctcaaaaaactgaaacct 20302268  T
Q  200 ccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||||||||||||||||||||||| |||| ||||| |||| ||||||||||| ||||||| |||||||    
T  20302267 ccatcgtgccacgttgccttgccatcatgccgcgattctgcagaaatctgattttaagttaactctcaca 20302198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 269
Target Start/End: Complemental strand, 51752371 - 51752104
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaa 102  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  51752371 cttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaa 51752272  T
Q  103 tatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctca-aaaactgaaacctcc 201  Q
    || |||||||||||| || |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  51752271 tacgtttatgttattcgccgccagcgcaccatcgtgccacgatgcggccccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacctcc 51752172  T
Q  202 atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||||||||||||   |||||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  51752171 atcgtgccacgttgcccaaccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 51752104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 13761845 - 13761577
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  13761845 cccttgtttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaa 13761746  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| ||||||| || |||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13761745 aatacgtttctgttattcgccgccagcacaccatcgtgccgcgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 13761646  T
Q  201 catcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||| ||||||||||||  ||||||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  13761645 catcatgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 13761577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 51750047 - 51749778
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  51750047 cccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaa 51749948  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctca-aaaactgaaacct 199  Q
    |||| |||| ||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  51749947 aatacgtttctgttattcgccgccagcgcactatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacct 51749848  T
Q  200 ccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||| ||||||||||   |||||||||||||||| |||| |||  |||||| ||||||| |||||||    
T  51749847 ccatcgtaccacgttgcccaaccatcgtgccacgattctgcagaaacttgattttaagttaactctcaca 51749778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 10400101 - 10400369
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||    
T  10400101 cccttgtttcagccccctctatctcccagtttgctctgatacaaggtctatatttatagaaaaagtttcgcttaaaatttggaacaaatctgcacccaaa 10400200  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||  |||||||||    
T  10400201 aatacgtttatgttatttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatatttccagtgctttgcctc-aaacttgaaacctc 10400299  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    | ||||||||||||||||  || ||||||||||||||  ||| ||| ||||||| ||||||| |||||||    
T  10400300 caatcgtgccacgttgcccagcaatcgtgccacgattccgcagaaacctgattttaagttaactctcaca 10400369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 6823893 - 6823651
Alignment:
Q  1 cccttgtttcagccccc-tctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaa 99  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||||| |||||||||    
T  6823893 cccttgtttcagcccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaa 6823794  T
Q  100 aaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctca-aaaactgaaacc 198  Q
    ||||| |||||||||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  6823793 aaatacgtttatgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcatgccacgatttttccagtgccttgcctcaaaaaactgaaacc 6823694  T
Q  199 tccatcgtgccacgttgccttgccatcgtgccacgattatgca 241  Q
    |||||||||||||||||||   ||||||||||| |||| ||||    
T  6823693 tccatcgtgccacgttgcccaaccatcgtgccatgattctgca 6823651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 15823554 - 15823319
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||| |||||| |||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| |||||    
T  15823554 cccttgtttcagccccctttatctctaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaa 15823455  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||  |||||||||    
T  15823454 aatatgtttctgttatttgctgctagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttctagtgctttgcctc-aaacttgaaacctc 15823356  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | ||||||||||||||||  |||||||||||||||||    
T  15823355 caatcgtgccacgttgcccagccatcgtgccacgatt 15823319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 28842503 - 28842266
Alignment:
Q  1 cccttgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccca 98  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||| ||    
T  28842503 cccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcactca 28842404  T
Q  99 aaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacc 198  Q
    ||||||||||| |||| || |||||||   ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  28842403 aaaatatgtttctgtttttcgctgccaggacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttgcct-aaaaactgaaacc 28842305  T
Q  199 tcc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||| |||||||||||| ||||||||||||||||||||||    
T  28842304 tccaatcgtgccacgtagccttgccatcgtgccacgatt 28842266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 28840688 - 28840451
Alignment:
Q  1 cccttgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccca 98  Q
    ||||||||||| |||||| ||||||  |||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||| ||    
T  28840688 cccttgtttcatccccctgtatctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactca 28840589  T
Q  99 aaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacc 198  Q
    ||||||||||| |||| || ||||||| | ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||||||    
T  28840588 aaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacaatttttccagtaccttgcct-aaaaactgaaacc 28840490  T
Q  199 tcc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  28840489 tccaatcgtgccacgttgccttgccatcgtgccacgatt 28840451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 13215089 - 13214854
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||| ||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  13215089 cccttgtttcagccccctctatctcaaaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaa 13214990  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| ||||||||||||||| | ||||||||||||||| ||| | |||||| ||||||||    ||||||| |||||||| ||||||||||||||    
T  13214989 aatacgtttttgttatttgctgccaacacaccatcgtgccacgttgcaatcccatcatgccacgaaaaatccagtgacttgcctc-aaaactgaaacctc 13214891  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | ||||||||||||||||   ||||||||||||||||    
T  13214890 caatcgtgccacgttgcccaaccatcgtgccacgatt 13214854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 6823023 - 6822775
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||||||    
T  6823023 cccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaa 6822924  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctc-aaaaactgaaacct 199  Q
    ||||  ||| | ||||| || |||| ||||||||||||||||                     |||||||||||||||||||||| ||||||||||||||    
T  6822923 aatacatttctattattcgccgccagcgcaccatcgtgccac---------------------gatttttccagtgccttgcctcaaaaaactgaaacct 6822845  T
Q  200 ccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||||||||||||||  ||||||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  6822844 ccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 6822775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 41646928 - 41646717
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| |||||    
T  41646928 cccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaa 41646829  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| ||||||| |||||||  |||||||||||||||| ||| | |||| ||||||||||    ||||||| |||||||| ||||||||||||||    
T  41646828 aatatgtttctgttattcgctgccagtgcaccatcgtgccacgttgcaatcccaccgtgccacgaaaaatccagtgacttgcctc-aaaactgaaacctc 41646730  T
Q  201 -catcgtgccacg 212  Q
      |||||||||||    
T  41646729 taatcgtgccacg 41646717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28207339 - 28207500
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  28207339 cccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaa 28207438  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgcca 162  Q
    || | |||||||||||| || |||| ||||||||||||||||| || |||||||||||||||    
T  28207439 aaaacgtttatgttattcgccgccagcgcaccatcgtgccacgttgtgaccccatcgtgcca 28207500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 3579889 - 3580126
Alignment:
Q  1 cccttgtttcagcccc--ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccca 98  Q
    ||||||||||||||||  |||||||||||| ||| |  |||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||| |     
T  3579889 cccttgtttcagccccccctctatctcaaattttacgctgatacaaggtctatatttaaagtaaaagtatcgcttaaaatttggaacaaatttgcactct 3579988  T
Q  99 aaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacc 198  Q
    |||||| ||||||| |||| || |||| ||||||||||||||||| ||| | |||| ||| |||||||||||||| || |||||||| | |||||||||     
T  3579989 aaaatacgtttatgatattcgccgccagcgcaccatcgtgccacgttgcaatcccaccgtaccacgatttttccaatgacttgcctc-ataactgaaaca 3580087  T
Q  199 tcc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||| || ||| ||||||||| ||| ||||||||||||||    
T  3580088 tccaattgtgtcacgttgccctgcaatcgtgccacgatt 3580126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 47451656 - 47451508
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||| |||||||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||| |||    
T  47451656 cccttgtttaagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaatatttggaacaaatctgcaccaaaa 47451557  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcga 149  Q
    |||| |||| ||||||| |||| || |||||||||||||||||||||||    
T  47451556 aatacgtttctgttattcgctgtcagcgcaccatcgtgccacgatgcga 47451508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 71 - 261
Target Start/End: Complemental strand, 16226083 - 16225895
Alignment:
Q  71 cttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgattttt 170  Q
    |||||||| || ||||||| ||||||||||| ||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16226083 cttaaaatctgtaacaaatctgcacccaaaa-tatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgattttt 16225986  T
Q  171 ccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaa 261  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||||   || ||||||||||||| |||| ||| ||||||| |||||||    
T  16225985 ccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccaaccgtcgtgccacgattctgcagaaacctgattttaagttaa 16225895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 7 - 216
Target Start/End: Original strand, 30790673 - 30790882
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatg 106  Q
    ||||||| ||||||||||||| |||| || |||||||| |||||||||| |||||||||| |||||||||||||||||||||| |||||  ||||||| |    
T  30790673 tttcagctccctctatctcaaggtttactctgatacaatgtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactgaaaaatacg 30790772  T
Q  107 tttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcg 205  Q
    |||||||| ||  |  ||| ||||||||||||||||  ||||| |||||||||||||| ||||||||||| ||||| || | ||||||||| ||| ||||    
T  30790773 tttatgtttttcccctccagcgcaccatcgtgccacattgcgatcccatcgtgccacgttttttccagtgacttgcttc-ataactgaaacatccaatcg 30790871  T
Q  206 tgccacgttgc 216  Q
    |||||| ||||    
T  30790872 tgccacattgc 30790882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 71 - 269
Target Start/End: Complemental strand, 47177274 - 47177078
Alignment:
Q  71 cttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgattttt 170  Q
    |||||||| || ||||||| ||| |||||||||| |||| | || ||  | |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  47177274 cttaaaatctgtaacaaatctgctcccaaaaataggttt-tatttttatccgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgattttt 47177176  T
Q  171 ccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||||  | | ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  47177175 ccagtgtcttgcc-caaaaactaaaacctccatcgtgccacgttgcccagtcgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 47177078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 127 - 269
Target Start/End: Complemental strand, 47179570 - 47179428
Alignment:
Q  127 cgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcg 226  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||||||||  ||| |||    
T  47179570 cgcaccatcgtgccacgatgagaccccatcgtgccacgattttttcagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcg 47179471  T
Q  227 tgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||||||| |||| ||| ||||||| ||||||| |||||||    
T  47179470 tgccacgattctgcagaaacctgattttaagttaactctcaca 47179428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 38925753 - 38925892
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaa 102  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||||||||||    
T  38925753 cttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaataaatctgcacccaaaaa 38925852  T
Q  103 tatgtttatgttatttgctgccaccgcaccatcgtgccac 142  Q
    ||   || |||| || ||||||| ||| ||||||||||||    
T  38925853 tacacttctgttgttcgctgccaacgccccatcgtgccac 38925892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 39462524 - 39462310
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccca-aaaa 102  Q
    |||||||||||  |||||||||||||||| || ||||||||||||||||||| |||| ||||| |  ||||||||||||||||||| |||||||| ||||    
T  39462524 ttgtttcagccttctctatctcaaagtttactctgatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatctgcacccaaaaaa 39462425  T
Q  103 tatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc-c 201  Q
    || |||| |||||||  |||| | ||||||||||||||||  ||| | |||||||||||||||    |||| || |||||||| ||||||||||||||      
T  39462424 tacgtttctgttattcactgcaagcgcaccatcgtgccacattgcaatcccatcgtgccacgaaaaatccactgacttgcctc-aaaactgaaacctcta 39462326  T
Q  202 atcgtgccacgttgcc 217  Q
    ||||||||||||||||    
T  39462325 atcgtgccacgttgcc 39462310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 14098246 - 14098385
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaat 103  Q
    ||||||||| |||||||||||||||||||  ||||||||||||||||||||| |||| ||||| |  ||||||||||||||| ||| |||||||||||||    
T  14098246 ttgtttcagtcccctctatctcaaagtttagtttgatacaaggtctatatttatagtgaaagtattacttaaaatttggaac-aatctgcacccaaaaat 14098344  T
Q  104 atgtttatgttatttgctgccaccgcaccatcgtgccacga 144  Q
    | |||||||||||| ||||||| ||||||||||||| ||||    
T  14098345 acgtttatgttattcgctgccagcgcaccatcgtgcaacga 14098385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 131 - 269
Target Start/End: Complemental strand, 23783376 - 23783238
Alignment:
Q  131 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgcc 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||| ||  |||  ||  |||||||    
T  23783376 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgcc 23783277  T
Q  231 acgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||| |||| ||| ||||||| ||||||| |||||||    
T  23783276 acgattgtgcagaaacctgattttaagttaactctcaca 23783238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 20291386 - 20291279
Alignment:
Q  164 gatttttccagtgccttgcctcaaaaa-ctgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaa 262  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||     
T  20291386 gatttttccagtgccatgcctcaaaaaactgaaacctccaccgtgccacgttgccttgccatcgtgccacgattctgcagaaatctgattttaagttaac 20291287  T
Q  263 tctcacat 270  Q
    ||||||||    
T  20291286 tctcacat 20291279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16231609 - 16231521
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| || |||||||    
T  16231609 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaat 16231521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 49687492 - 49687405
Alignment:
Q  57 tagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacga 144  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||| |||| || ||||||||||||||||||    
T  49687492 tagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttattcgctgtcagcgcaccatcgtgccacga 49687405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16226175 - 16226087
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| || |||||||    
T  16226175 cccttgttttagacccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaat 16226087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 16231458 - 16231369
Alignment:
Q  152 ccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgca 241  Q
    ||||||||||||||||||||||||| ||||||  ||||||| ||||||||||||||||||||||||  ||| ||||||||||||| ||||    
T  16231458 ccatcgtgccacgatttttccagtgtcttgcccaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgca 16231369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20291465 - 20291390
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaa 76  Q
    ||||||||||| | |||||||||||||| |||||| | ||||||||||||||||| ||||||||||||||||||||    
T  20291465 cccttgtttcatctccctctatctcaaaatttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaa 20291390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 47177370 - 47177278
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    |||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||   ||||||||| || |||||||    
T  47177370 cccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 47177278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 47179721 - 47179629
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    |||||||||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||||   ||||||||| || |||||||    
T  47179721 cccttgtttcagccccctctatctctctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 47179629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2617524 - 2617460
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||| ||||    
T  2617524 cccttgtttcagcctcctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaag 2617460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 49495472 - 49495537
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||| |||| || |||||||| |||||||||| ||||||||||    
T  49495472 cccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagt 49495537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 23783444 - 23783362
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgat 166  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||    
T  23783444 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgat 23783362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28998526 - 28998591
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||| ||||||||||||||||| || |||| ||| |||||||||| ||||||||||    
T  28998526 cccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaagt 28998591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29004242 - 29004307
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||| ||||||||||||||||| || |||| ||| |||||||||| ||||||||||    
T  29004242 cccttgtttcagcctcctctatctcaaagtttactctgattcaaagtctatatttatagtaaaagt 29004307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14183859 - 14183923
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||| ||||||||||| |||| || ||||||| ||||||||||| |||||||||    
T  14183859 cccttgtttcagccctctctatctcaaggtttactctgatacatggtctatatttatagtaaaag 14183923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 25251551 - 25251611
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    |||||||||||||||||||||||| |||| || |||||||| |||||||||| ||||||||    
T  25251551 ttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaa 25251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42922242 - 42922126
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgctta-aaatttggaacaaatttgcacccaa 99  Q
    ||||| ||||| |||||||||||| || |||| || ||||||||  ||||||||| |||||||||| || || | ||||||||||||||| |   |||||    
T  42922242 cccttatttcaaccccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagtatccctcataaatttggaacaaatctcagcccaa 42922143  T
Q  100 aaatatgtttatgttat 116  Q
    ||||||| |||||||||    
T  42922142 aaatatgattatgttat 42922126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 47451495 - 47451405
Alignment:
Q  179 ttgcctcaaaaactgaaacctcca-tcgtgccacgttgccttgccatcgtgccacgatta-tgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||||||| |||||||||||| ||||||||| |||||  |||||||||||||||||  |||| ||||||||||||||||||| |||||||    
T  47451495 ttgcctcaaaa-ctgaaacctccaatcgtgccacattgcccagccatcgtgccacgatttctgca-aaatctgatttgaagttaactctcaca 47451405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25248787 - 25248850
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    ||||||||||||||||||||||||||| |||| || |||||||| |||||||||| ||| ||||    
T  25248787 cccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttctagaaaaa 25248850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 18800845 - 18800907
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||| | |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  18800845 ttgtttcagccccttgtatctcaaggtttactctgatacaaggtctatatttatagtaaaagt 18800907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 11457751 - 11457812
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||||||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  11457751 ttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 11457812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 24325648 - 24325599
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  24325648 ctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 24325599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17186401 - 17186465
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||  ||||||||| || ||||||    
T  17186401 cccttatttcagccccctctatctcaaggtttgctctgatacaaaatctatatttatattaaaag 17186465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 50079094 - 50079158
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  | |||||| |||||||||| |||||||||    
T  50079094 cccttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 50079158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17318901 - 17318838
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    ||||||||||||||||||||||||||| |||| || ||||||||   |||||||| ||||||||    
T  17318901 cccttgtttcagccccctctatctcaaggtttactatgatacaaaacctatatttatagtaaaa 17318838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18307117 - 18307054
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| |||||||||| ||| ||||    
T  18307117 cccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaa 18307054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 23783533 - 23783494
Alignment:
Q  27 aagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  23783533 aagtttgctttgatacaaggtctatatttatagtaaaagt 23783494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 15295137 - 15295183
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaa 63  Q
    |||| |||||||||||||| ||||||||||||||||||| |||||||    
T  15295137 ctctctctcaaagtttgctctgatacaaggtctatatttatagtaaa 15295183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 21948460 - 21948526
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaa 63  Q
    |||||||||||||||||||||||||    |||||||  | ||||||||||||||||||| |||||||    
T  21948460 cccttgtttcagccccctctatctctctcaaagtttagtatgatacaaggtctatatttatagtaaa 21948526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31423147 - 31423212
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| |  ||||||| ||||||||||    
T  31423147 cccttgtttcagccccctctatctcaaggtttacactgatacaatgcttatatttatagtaaaagt 31423212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39932081 - 39932017
Alignment:
Q  1 cccttgtttcagccccctcta--tctcaaagtttgctttgatacaaggtctatatttgtagtaaa 63  Q
    |||||||||||||||||||||  |||||||||||  | | ||||||||||||||||| |||||||    
T  39932081 cccttgtttcagccccctctatctctcaaagttttgtctcatacaaggtctatatttatagtaaa 39932017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 50248848 - 50248909
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||| ||||||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  50248848 ttgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 50248909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2510597 - 2510666
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||    ||||||||||||||||||| ||||||||||    
T  2510597 cccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 2510666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18839595 - 18839531
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||  |||| |  | |||||| |||||||||| |||||||||    
T  18839595 cccttgtttcagccccctctatctcatggtttacaataatacaatgtctatatttatagtaaaag 18839531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31489923 - 31489859
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||| ||||||||||||||| |||| |  | |||||| |||||||||| |||||||||    
T  31489923 cccttgtttcaaccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 31489859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 49687400 - 49687334
Alignment:
Q  170 tccagtgccttgcctcaaaaactgaaacctcca-tcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||||||| |||||||||||| |||||||||||| | |||||||||||||  |||||| ||||||||||    
T  49687400 tccagtgacttgcctcaaaa-ctgaaacctccaattgtgccacgttgcccagccatcatgccacgatt 49687334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 50076946 - 50077009
Alignment:
Q  2 ccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||  |||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  50076946 ccttgtttcagccctttctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 50077009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 6995976 - 6996038
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||| ||||||||||||||||  ||| || |||| |||||||||||||| || |||||||    
T  6995976 ttgtttcggccccctctatctcaagatttactctgattcaaggtctatatttataataaaagt 6996038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8347542 - 8347607
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgc-tttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||| ||||||||||||||| |||| | | ||||||||||||||| ||| ||||||||||    
T  8347542 cccttgtttcaaccccctctatctcaaggtttacatctgatacaaggtctat-tttatagtaaaagt 8347607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 38925915 - 38925965
Alignment:
Q  187 aaaactgaaacctcca-tcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    |||||||||||||||| |||||||||||||||  |||||||| ||||||||    
T  38925915 aaaactgaaacctccaatcgtgccacgttgcccagccatcgtaccacgatt 38925965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2949504 - 2949569
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||| |||| ||  ||| |||  ||||||||| | ||||||||    
T  2949504 cccttgtttcagccccctctatctcaaggttttctcggattcaatatctatatttattgtaaaagt 2949569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 9241359 - 9241424
Alignment:
Q  2 ccttgtttcagcccc-ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||| |||||||| || |||| || |||||||| | |||||||| ||||||||||    
T  9241359 ccttgtttcagcccccctctatcttaaggtttactctgatacaaagcctatatttatagtaaaagt 9241424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 13449947 - 13449996
Alignment:
Q  127 cgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 176  Q
    |||||||||||| |||||| ||| || |||||| ||||||||||||||||    
T  13449947 cgcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagtg 13449996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16428661 - 16428596
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||| |  ||||||| ||||| ||   |||||||| ||||||||||    
T  16428661 cccttgtttcagccccctctatctaatggtttgctctgatataaaacctatatttatagtaaaagt 16428596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 26613517 - 26613601
Alignment:
Q  7 tttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    |||||||||||||||||||  || ||||  | ||||||||||||||||||| ||| |||||  || || |||| |||||||||||    
T  26613517 tttcagccccctctatctctcaaggtttcatctgatacaaggtctatatttatagcaaaagaatccctcaaaaattggaacaaat 26613601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 48665167 - 48665114
Alignment:
Q  13 ccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||| || |||| || |||| |||||||||||||| ||||||||||    
T  48665167 ccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagt 48665114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8349321 - 8349385
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgc-tttgatacaaggtctatatttgtagtaaaa 64  Q
    ||||||||||||||| ||||||||||| |||||| | | ||||||| ||||||||| || |||||    
T  8349321 cccttgtttcagccctctctatctcaaggtttgcatctaatacaagatctatatttataataaaa 8349385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 16431096 - 16431044
Alignment:
Q  14 cccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||| ||||||| ||||||||   |||||||| ||||||||||    
T  16431096 cccctctatctcaaggtttgctctgatacaaaacctatatttatagtaaaagt 16431044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17324073 - 17324009
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||| ||||| ||||||||||| |||| || | |||||| |||||||||| || ||||||    
T  17324073 cccttgttttagccctctctatctcaaggtttactctaatacaaagtctatatttataataaaag 17324009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 50307820 - 50307884
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||| |||||||||| | |||||||| |||| ||||||||||| |  ||||||| |||||||||    
T  50307820 cccttttttcagccccatatatctcaaggtttactttgatacaaagcttatatttatagtaaaag 50307884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 27104783 - 27104523
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||    
T  27104783 cccttgtttcagccccctctatctcaaagttttctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcactcaaa 27104684  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||||||||||||| ||  |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27104683 aatatgtttatgtttttccctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 27104584  T
Q  201 catcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaa 261  Q
    ||||||||||||||||| | | |||||||||||||| |||| ||||||||||| |||||||    
T  27104583 catcgtgccacgttgcccttcaatcgtgccacgattctgcagaaatctgattttaagttaa 27104523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 3 - 261
Target Start/End: Original strand, 19502284 - 19502542
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaa 102  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||| ||||| |||| |||||||    
T  19502284 cttgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaattttcccttaaaatttggatcaaatctgcaaccaaaaa 19502383  T
Q  103 tatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcca 202  Q
    ||||||| ||||||| |  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19502384 tatgtttctgttattcgtcgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctcca 19502483  T
Q  203 tcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaa 261  Q
    |||||||||||||||||||||||||||||||||| |||| ||| ||||||| |||||||    
T  19502484 tcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaa 19502542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 19504616 - 19504885
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| |||    
T  19504616 cccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcacctaaa 19504715  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||| ||||| ||||||| |  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||    
T  19504716 aatgtgtttctgttattcgtcgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaattaaaacctc 19504815  T
Q  201 catcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcacat 270  Q
    ||||||||||||||||||||||||||||||| |||| |||  ||| ||||||| ||||||| | ||||||    
T  19504816 catcgtgccacgttgccttgccatcgtgccatgattctgctgaaacctgattttaagttaactttcacat 19504885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 24162483 - 24162752
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||    
T  24162483 cccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcacccaaa 24162582  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctc-aaaaactgaaacct 199  Q
    |||| |||| |  |||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24162583 aatacgtttctaatattcgcagccagcgcacaatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaacct 24162682  T
Q  200 ccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||||||||||||||   |||| ||||||||||| |||| |||  |||||| ||||||| |||||||    
T  24162683 ccatcgtgccacgttgcccaaccattgtgccacgattctgcagaaacttgattttaagttaactctcaca 24162752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 42064499 - 42064264
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||  |||    
T  42064499 cccttgtttcagctccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactaaaa 42064400  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| |||| || ||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||| |||  |||||||||    
T  42064399 aatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctc 42064301  T
Q  201 ca-tcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    || |||| ||||||||||  || ||||||||||||||    
T  42064300 cagtcgtaccacgttgcccagcaatcgtgccacgatt 42064264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 21520964 - 21521201
Alignment:
Q  1 cccttgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccca 98  Q
    |||||||||||||||| ||||||||  |||||||  | ||||||||||| ||||||| |||||||||| ||||||||| |||||||||||| ||||||||    
T  21520964 cccttgtttcagccccatctatctctcaaagtttagtctgatacaaggtttatatttatagtaaaagtatcgcttaaattttggaacaaatctgcaccca 21521063  T
Q  99 aaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacc 198  Q
    |||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||||| || ||||||||||||    
T  21521064 aaaatacgtttatgttattcgctgccagcgcaccatcgtgccacgttgcgatcccatcgtggcacgatttttccagtggcttgcttc-aaaactgaaacc 21521162  T
Q  199 tcc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||| ||||||||||||||||  |||||||||||||||||    
T  21521163 tccaatcgtgccacgttgcccagccatcgtgccacgatt 21521201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 13910315 - 13910491
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||    
T  13910315 cccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactcaaa 13910414  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgc 177  Q
    ||||||||| |||| || ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13910415 aatatgtttctgtttttcgctgccagcgcaccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgc 13910491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 3 - 236
Target Start/End: Original strand, 6259088 - 6259321
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaa 102  Q
    ||||||||| || |||||||||||||||||  | | ||||||||||||||||| |||||||||| |||||||||||||||||||| | ||||||||||||    
T  6259088 cttgtttcatcctcctctatctcaaagtttagtctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaagtctgcacccaaaaa 6259187  T
Q  103 tatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc- 201  Q
    ||||||| |||||||  | |||| |||||||||||| |||| ||||| |||||||||||||||||||||||||| ||| |||| ||||||||||| |||     
T  6259188 tatgtttctgttattcaccgccagcgcaccatcgtgtcacgttgcgatcccatcgtgccacgatttttccagtgactttcctc-aaaactgaaacatcca 6259286  T
Q  202 atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    || ||||||||||||   |||||||||||||||||    
T  6259287 atagtgccacgttgcacagccatcgtgccacgatt 6259321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 22407680 - 22407915
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||| |||| ||||||| ||||| || ||||||||||||||||||| |||||||||| | ||||||||||| |||||||| ||||||||||    
T  22407680 cccttgtttcagcaccctatatctcacagtttactctgatacaaggtctatatttatagtaaaagtattgcttaaaattttgaacaaatctgcacccaaa 22407779  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| ||||||| ||||||| ||||||||||||||||| || || ||||||||||||| |||||| || || |||||||| ||||||||||| ||    
T  22407780 aatacgtttctgttattcgctgccaacgcaccatcgtgccacgttgtgatcccatcgtgccacaattttttcactgacttgcctc-aaaactgaaacatc 22407878  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | ||||||||| ||| || | | ||||||||||||||    
T  22407879 caatcgtgccatgttacccttcaatcgtgccacgatt 22407915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 40032329 - 40032553
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||| ||||||||||| ||||||||||    
T  40032329 cccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaacttggaacaaatctgcacccaaa 40032428  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| ||||||| ||||||| |||||||||||           | |||||||||||||||    ||||||| |||| ||| ||||||||||||||    
T  40032429 aatacgtttctgttattcgctgccagcgcaccatcgt-----------atcccatcgtgccacgaaaaatccagtgacttgtctc-aaaactgaaacctc 40032516  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | ||||||||||||||||  |||||||||||||||||    
T  40032517 caatcgtgccacgttgcccagccatcgtgccacgatt 40032553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 22287607 - 22287764
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  22287607 cccttgtttcagccccctatatctcaaagtttactttaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcacccaaa 22287706  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgt 158  Q
     |||  ||| ||||||| ||||||| |||||||| |||||||| | ||| ||||||||    
T  22287707 catacatttttgttattcgctgccagcgcaccatggtgccacgttacgatcccatcgt 22287764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 36559173 - 36559358
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36559173 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 36559271  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||||||||||||| ||  |||  ||| ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  36559272 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 36559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 6264419 - 6264560
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaat 103  Q
    |||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||||||    
T  6264419 ttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaaatatcgcttaaaatttggaacaaatctgcacccaaaaat 6264518  T
Q  104 atgtttatgttatttgctgccaccgcaccatcgtgccacgat 145  Q
    |||||| ||||||| || || |  ||||||||||||||||||    
T  6264519 atgtttctgttattcgccgctaatgcaccatcgtgccacgat 6264560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 43623842 - 43623982
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaat 103  Q
    |||||||| |||||||||||||  ||||| || ||||||||||||||| ||| |||||||||| | |||||||||||||||||||| ||||||| |||||    
T  43623842 ttgtttcacccccctctatctcccagtttactctgatacaaggtctatttttatagtaaaagtattgcttaaaatttggaacaaatctgcaccc-aaaat 43623940  T
Q  104 atgtttatgttatttgctgccaccgcaccatcgtgccacgat 145  Q
    | |||||||||||||||||||| |||||||||||||||||||    
T  43623941 acgtttatgttatttgctgccagcgcaccatcgtgccacgat 43623982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 131 - 269
Target Start/End: Original strand, 36561539 - 36561677
Alignment:
Q  131 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgcc 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||  |  |||  ||| |||||||    
T  36561539 ccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgtgaagcccagccgtcgtgcc 36561638  T
Q  231 acgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||| |||| ||| ||||||| ||||||| |||||||    
T  36561639 acgattgtgcagaaacctgattttaagttaactctcaca 36561677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 122 - 269
Target Start/End: Original strand, 45332528 - 45332675
Alignment:
Q  122 gccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgc 221  Q
    |||| |||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||  ||||||| |||||||||||||||| ||  |||  ||    
T  45332528 gccagcgcaccatcgtgccacgatgtgaccccatcgttccacgatttttccagttccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagc 45332627  T
Q  222 catcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    | ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  45332628 cgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 45332675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 18800573 - 18800686
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||| |||||| | |||| |  ||||||||||||||||||| |||||||||| ||| |||||||||||||||||| |||||  |||    
T  18800573 cccttgtttcagccccctatatctccatgtttaccctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaacaaatctgcacttaaa 18800672  T
Q  101 aatatgtttatgtt 114  Q
    ||||||||| ||||    
T  18800673 aatatgtttctgtt 18800686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 43623968 - 43624077
Alignment:
Q  152 ccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctga 250  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||| ||||||  |||||||||||| |||| |||| ||| ||||    
T  43623968 ccatcgtgccacgattttttcagtgccttgcctc-aaaactgaaacctccaatcgtgccatgttgcccagccatcgtgccatgattctgcagaaacctga 43624066  T
Q  251 tttgaagttaa 261  Q
    ||| |||||||    
T  43624067 ttttaagttaa 43624077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 12342684 - 12342798
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaat 103  Q
    |||||||||||||||||||||||| |||| || |||||||| || ||||||| |||||||||| ||    |||| ||||||||||| ||  |||||||||    
T  12342684 ttgtttcagccccctctatctcaaggtttactctgatacaatgtgtatatttatagtaaaagtatcctaaaaaaattggaacaaatctgaccccaaaaat 12342783  T
Q  104 atgtttatgttattt 118  Q
    ||| |||||||||||    
T  12342784 atgattatgttattt 12342798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 35107268 - 35107110
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttat 116  Q
    ||||| ||||| |||| || |||||||| |||||||||| |||||||||| || ||||||||||||||||||| ||||   ||||||| | |||||||||    
T  35107268 ctctacctcaaggtttactatgatacaatgtctatatttatagtaaaagtatcccttaaaatttggaacaaatctgcattgaaaaatacgattatgttat 35107169  T
Q  117 ttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagt 175  Q
    | ||   || |||||||  ||| |||| | ||| ||||||||| |||| ||||||||||    
T  35107168 tcgccttcagcgcaccaatgtgacacgttacgatcccatcgtgacacgttttttccagt 35107110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 45280256 - 45280321
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| |||||    
T  45280256 cccttgtttcagccccctctatctcaaagtttgctctgatacaaggtatatatttatagtgaaagt 45280321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 42452767 - 42452702
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| |||||||||| || |||||||    
T  42452767 cccttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttataataaaagt 42452702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 22163219 - 22163282
Alignment:
Q  2 ccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||||||| |  |||||||| |||||||||| |||||||||    
T  22163219 ccttgtttcagccccctctatctcaaagtttacactgatacaatgtctatatttatagtaaaag 22163282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 36561450 - 36561532
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgat 166  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||    
T  36561450 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgat 36561532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 37963198 - 37963263
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||| |||| || | |||||| |||||||||| ||||||||||    
T  37963198 cccttgtttcagccccctctatctcaaggtttactcttatacaaagtctatatttatagtaaaagt 37963263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19007624 - 19007560
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| || |||||||| | |||||||| |||||||||    
T  19007624 cccttgtttcagccccctctatctcaaggtttactatgatacaaagcctatatttatagtaaaag 19007560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31733036 - 31733100
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| || || ||||| |||||||||| |||||||||    
T  31733036 cccttgtttcagccccctctatctcaatgtttactctgttacaaagtctatatttatagtaaaag 31733100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 45332384 - 45332439
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaa 77  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  45332384 tctccaagtttgctttgatacaaggtctatatttatagtaaaagttctgcttaaaa 45332439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 6264546 - 6264611
Alignment:
Q  152 ccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgcc 217  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||| ||| ||| ||||||||||||    
T  6264546 ccatcgtgccacgatttttccagtgacttgcctc-aaaactgaaacatccaatcatgccacgttgcc 6264611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17849101 - 17849037
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| || ||||||| |||||||||    
T  17849101 cccttgtttcagccccctctatctcaaggtttacactgatacaatgtttatatttatagtaaaag 17849037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 36559067 - 36559111
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||    
T  36559067 tctccaagtttgctttgatacaaggtctatatttatagtaaaagt 36559111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 36561344 - 36561388
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||    
T  36561344 tctccaagtttgctttgatacaaggtctatatttatagtaaaagt 36561388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 36561518 - 36561553
Alignment:
Q  131 ccatcgtgccacgatgcgaccccatcgtgccacgat 166  Q
    ||||||||||||||||||||||||||||||||||||    
T  36561518 ccatcgtgccacgatgcgaccccatcgtgccacgat 36561553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 28462593 - 28462651
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcac 95  Q
    ||||||||||| ||||||| ||||||||||  | ||||||||||||||||||| |||||    
T  28462593 tgatacaaggtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcac 28462651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3022147 - 3022086
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaa 62  Q
    |||||||||||||| ||| |||||||| |||| || |||||||| |||||||||| ||||||    
T  3022147 cccttgtttcagcctcctatatctcaaggtttactctgatacaaagtctatatttatagtaa 3022086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 20147040 - 20147125
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgctta-aaatttggaacaaatttgcacccaaaaatatg 106  Q
    |||||| |||| |||||||||||||||||||||| |||||||| | |  || | ||| ||||||||||||||  ||||||||||||    
T  20147040 tctcaaggtttactttgatacaaggtctatatttatagtaaaaatattcctcataaaattggaacaaatttgagcccaaaaatatg 20147125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22874126 - 22874061
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||| | ||||||| |||||||| | || ||||| ||| ||||||    
T  22874126 cccttgtttcagccccctctatctccaggtttgctctgatacaaagcctgtatttatagcaaaagt 22874061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 28196618 - 28196557
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||||||||||||| |||| || |||||||| |  ||||||| |||||||||    
T  28196618 ttgtttcagccccctctatctcaatgtttactctgatacaaagcatatatttatagtaaaag 28196557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5377700 - 5377769
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||| ||||||||||||    |||||||||| ||| ||||||||||||||| |||| |||||    
T  5377700 cccttgtttcagtcccctctatctctctcaaagtttgctctgaaacaaggtctatatttatagtgaaagt 5377769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11578375 - 11578439
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||| |||||||||||  ||| |  ||||| ||||||||||||| |||||||||    
T  11578375 cccttgtttcagcccactctatctcaagatttaccctgatataaggtctatatttatagtaaaag 11578439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11739831 - 11739895
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||| |||||||||||||||||| |||| |  | |||||| |||||||||| |||||||||    
T  11739831 cccttgttccagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 11739895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14837257 - 14837193
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||| ||||||||||||| |||| |  |||||||| ||||||||||  ||||||||    
T  14837257 cccttgtttcagctccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaag 14837193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42923780 - 42923847
Alignment:
Q  1 cccttgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||| ||||||||||  || |||| || |||| |||||||||||||| ||||||||||    
T  42923780 cccttgtttcagcctcctctatctctcaaggtttactatgattcaaggtctatatttatagtaaaagt 42923847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15539746 - 15539809
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    ||||||||||| |||||| |||||||| |||| |  |||||||| |||||||||| ||||||||    
T  15539746 cccttgtttcaaccccctatatctcaaggtttacactgatacaatgtctatatttatagtaaaa 15539809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 45157001 - 45156922
Alignment:
Q  35 tttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttatgtt 114  Q
    ||||||| ||||||||||||| |||||||||  || || ||||||||||||||||   | || ||||||| |||||||||    
T  45157001 tttgatataaggtctatatttatagtaaaagcatccctcaaaatttggaacaaatccacgcctaaaaatacgtttatgtt 45156922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 123
Target Start/End: Complemental strand, 35028527 - 35028440
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatg--tttatgttatttgctgc 123  Q
    |||||||| |||||||||| |||||||||| || || |||| ||||||||||| | || || ||||||||  ||||| |||||||||||    
T  35028527 tgatacaatgtctatatttatagtaaaagtatccctaaaaaattggaacaaatct-caacctaaaatatgattttattttatttgctgc 35028440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23452508 - 23452577
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||| ||||    |||||||    ||||||||||||||||||| ||||||||||    
T  23452508 cccttgtttcagccccctctgtctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 23452577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 34979852 - 34979904
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatattt 55  Q
    ||||||||||||||||||||||||| |||| |  | |||||| ||||||||||    
T  34979852 cttgtttcagccccctctatctcaaggtttacactaatacaatgtctatattt 34979904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 40699278 - 40699178
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgctta-aaatttggaacaaatttgcacccaaaaatatgtttatgtta 115  Q
    |||| |||||| |||| || |||| |||||||||||||| |||||||||| || || | ||| ||||||||||| |   |||||||||||| || |||||    
T  40699278 ctctctctcaaggtttactctgatgcaaggtctatatttatagtaaaagtatccctcagaaaattggaacaaatctcagcccaaaaatatgattctgtta 40699179  T
Q  116 t 116  Q
    |    
T  40699178 t 40699178  T

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Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 51015308 - 51015042
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| |||||||||| |||||||||| |||||||||||||||||||||| |||||  |||    
T  51015308 cccttgtttcagccccctctatctccaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactgaaa 51015209  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  51015208 aatatgtttctgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctaaaaaactgaaacctc 51015109  T
Q  201 catcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctca 267  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||||||| ||||||| |||||    
T  51015108 catcgtgccacgttgccttgccatcatgccacgattctgcagaaatctgattttaagttaactctca 51015042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 24888858 - 24888598
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||| | |||||||||||||||||||| ||||| ||||    
T  24888858 cccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcactcaaa 24888759  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| |||| || ||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||  |||||||||    
T  24888758 aatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctc 24888660  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaa 261  Q
    | ||||||||||||||||| ||||||||||||| ||| |||| ||||||||||| |||||||    
T  24888659 caatcgtgccacgttgcctagccatcgtgccacaattctgcagaaatctgattttaagttaa 24888598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 9174417 - 9174684
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| | ||||||||  || ||||||| ||||||||||    
T  9174417 cccttgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaaactgtaacaaatctgcacccaaa 9174516  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| |||| ||  |||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||| |||||||    
T  9174517 aatatgtttctgtttttccctgccagcgcaccatcgtgccacgatgagaccccatcgtgccatgatttttccagtgccttgcctaataaactaaaacctc 9174616  T
Q  201 catcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||||| ||||||||| ||| ||||||||||||| ||||  || ||||||| ||||||| |||||||    
T  9174617 catcgtgctacgttgcctagccgtcgtgccacgattctgca-gaacctgattttaagttaactctcaca 9174684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 22803005 - 22803270
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||| | ||    
T  22803005 cccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc-aa 22803103  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||    
T  22803104 aatacgtttttgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgagccacgatttttccagtgcctttcctc-aaaactgaaacctc 22803202  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctca 267  Q
    | ||||||||||||||||  |||||||| |||||||| |  | |||| |||||| ||||||| |||||    
T  22803203 caatcgtgccacgttgcccagccatcgtaccacgattctatagaaatttgattttaagttaactctca 22803270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 37089642 - 37089906
Alignment:
Q  1 cccttgtttcagccccctctatctca---aagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccc 97  Q
    |||||||||||||||||||||||||    ||||||    ||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||     
T  37089642 cccttgtttcagccccctctatctctctcaagtttagcctgatacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgcacct 37089741  T
Q  98 aaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaac 197  Q
    ||||||| |||| ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||| ||||    
T  37089742 aaaaatacgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcctcacctaaaaaactaaaac 37089841  T
Q  198 ctc-catcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaa 261  Q
     || |||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||    
T  37089842 atctcatcgtgccacgttgccttgccatcgtgccacgattctgcagaaatctgattttaagttaa 37089906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 37 - 269
Target Start/End: Original strand, 11006548 - 11006781
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcg 136  Q
    ||||||||||||||||||| |||||||||| | ||||||||| || ||||||| ||||||||||||||||||| |||| |||||||||| ||||||||||    
T  11006548 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgttttttgctgccagcgcaccatcg 11006647  T
Q  137 tgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||  || ||||||||||||||    
T  11006648 tgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaattgaaacctccatcgtgccacgttgcccagcgatcgtgccacgatt 11006747  T
Q  237 atgcat-aaatctgatttgaagttaaatctcaca 269  Q
     ||||| ||| ||||||| ||||||| |||||||    
T  11006748 ctgcataaaacctgattttaagttaactctcaca 11006781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 36919856 - 36920125
Alignment:
Q  1 cccttgtttcagccccctctatct--caaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccca 98  Q
    |||||||||||||||||| |||||  |||||||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  36919856 cccttgtttcagccccctatatctatcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccca 36919955  T
Q  99 aaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacc 198  Q
    |||||| |||| |  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||    
T  36919956 aaaatacgtttctactattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgacttgcctc-aaaattgaaacc 36920054  T
Q  199 tcc-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||| ||||||||||||||||  ||||||||||||||||| ||||  || ||||||| ||||||| |||||||    
T  36920055 tccaatcgtgccacgttgcccagccatcgtgccacgattttgca-gaacctgattttaagttaactctcaca 36920125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 22044661 - 22044897
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||||||||| |||| | |||    
T  22044661 cccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgca-ctaaa 22044759  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctc--aaaaactgaaacc 198  Q
    ||||||||| |||| ||  |||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  22044760 aatatgtttctgtttttccctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaaaaaatgaaacc 22044859  T
Q  199 tccatcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||||||||||||||||||| | | ||||||||||||||    
T  22044860 tccatcgtgccacgttgcccttcaatcgtgccacgatt 22044897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 4 - 269
Target Start/End: Complemental strand, 38409264 - 38408993
Alignment:
Q  4 ttgtttcagccccctctatctc------aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccc 97  Q
    ||||||||||||||||||||||      |||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||| |    
T  38409264 ttgtttcagccccctctatctccctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc 38409165  T
Q  98 aaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaac 197  Q
    |||||||||||| |||| || || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||||    
T  38409164 aaaaatatgtttctgtttttcgccgccaacgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaac 38409066  T
Q  198 ctcc-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||| ||||||||||| ||||  || |||||||||||||| |||| |||||| |||| ||||||| |||||||    
T  38409065 ctccaatcgtgccacgatgcccagcaatcgtgccacgattctgcagaaatctaattttaagttaactctcaca 38408993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 31849870 - 31850101
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||  |||||||| |||||||||  |||||||| |||||||||| |||||||||||||||||||||| ||||| ||||    
T  31849870 cccttgtttcagccccctctatctcctagtttgctctgatacaagacctatatttctagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaa 31849969  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| |||| || ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||    
T  31849970 aatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccaagatttttccagtgccttgcc-ccaaaactgaaacctc 31850068  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccac 232  Q
    | ||||||||||||||||  || ||||||||||    
T  31850069 caatcgtgccacgttgcccagcaatcgtgccac 31850101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 3 - 269
Target Start/End: Original strand, 5637738 - 5638006
Alignment:
Q  3 cttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccca 98  Q
    |||||||||||||||||||||||    |||||||||| | ||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||     
T  5637738 cttgtttcagccccctctatctctctcaaagtttgctcttatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccc- 5637836  T
Q  99 aaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacc 198  Q
    |||||| |||| |||| || ||||||| | ||||||| ||||||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||    
T  5637837 aaaatacgtttctgtttttcgctgccagctcaccatcatgccacgatgcgatcccatcgtgacatgatttttccagtgccttgcctc-aaaactgaaacc 5637935  T
Q  199 tccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||||||||||||||||  || ||||||||||||||  ||| ||| ||||||| ||||||| |||||||    
T  5637936 tccatcgtgccacgttgcccagcaatcgtgccacgattccgcagaaacctgattttaagttaactctcaca 5638006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 36921765 - 36922036
Alignment:
Q  1 cccttgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccca 98  Q
    ||||||||||| |||||||||||||  ||||||| || ||||||||||||||||||| | |||||||| |||||||||||||||||||||| |||| |||    
T  36921765 cccttgtttca-ccccctctatctctcaaagtttactctgatacaaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaatctgcatcca 36921863  T
Q  99 aaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacc 198  Q
    |||||| |||| ||||||| |||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  36921864 aaaatacgtttctgttattcgctgccaatgcaccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgacttgcctc-aaaactgaaacc 36921962  T
Q  199 tcc-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcacatta 272  Q
    ||| ||||||||| ||||||  |||||||| |||||||| ||||  || ||||||| ||||||| ||||||||||    
T  36921963 tccaatcgtgccatgttgcccagccatcgtaccacgattttgca-gaacctgattttaagttaactctcacatta 36922036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 5198482 - 5198266
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||| ||||    
T  5198482 cccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaa 5198383  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| |||| || ||||||| |||||||||||||||||||| || |||||||||||||||||||||||| || ||||||| |||  ||||| |||    
T  5198382 aatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgtgatcccatcgtgccacgatttttccagagctttgcctc-aaacttgaaatctc 5198284  T
Q  201 c-atcgtgccacgttgcc 217  Q
    | ||||||||||||||||    
T  5198283 caatcgtgccacgttgcc 5198266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 48486381 - 48486146
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  48486381 cccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaa 48486282  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| ||||||| ||||||| |||||||| |||||||  || ||||||||||||||||||    ||||||| |||||||| ||||||||||||||    
T  48486281 aatacgtttctgttattcgctgccagcgcaccattgtgccacattgtgaccccatcgtgccacgaaaaatccagtgacttgcctc-aaaactgaaacctc 48486183  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | |||||||||||||||   |||||||||||||||||    
T  48486182 caatcgtgccacgttgctcagccatcgtgccacgatt 48486146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 37 - 269
Target Start/End: Original strand, 3824880 - 3825112
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcg 136  Q
    ||||||||||||||||||| |||||||||| | |||||||||||||||||||| |||||||||||||| |||| ||||||| |  |||| ||||||||||    
T  3824880 tgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgtcgccaacgcaccatcg 3824979  T
Q  137 tgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgccacgat 235  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||||||| ||||||||||||||| ||||||||| ||||||  ||||||||| ||||||    
T  3824980 tgccacgatgcgaccccattgtgccatgatttttccagtgctttgcctc-aaaactgaaacctccaatcgtgccatgttgcccagccatcgtgtcacgat 3825078  T
Q  236 tatgcataaatctgatttgaagttaaatctcaca 269  Q
    | |||| ||| ||||||| ||||||| |||||||    
T  3825079 tctgcagaaacctgattttaagttaactctcaca 3825112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 11435017 - 11434769
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||    
T  11435017 cccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcactcaaa 11434918  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctc-aaaaactgaaacct 199  Q
    ||||||||| |||| || ||||||| ||||||||||||||||                     ||||||||||||| |||||||| ||||||||||||||    
T  11434917 aatatgtttctgtttttcgctgccagcgcaccatcgtgccac---------------------gatttttccagtgtcttgcctcaaaaaactgaaacct 11434839  T
Q  200 ccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||||||||||||||  |||||||| |||||||| |||| ||| ||||||| ||||||| |||||||    
T  11434838 ccatcgtgccacgttgcccagccatcgtaccacgattctgcagaaacctgattttaagttaactctcaca 11434769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 70 - 269
Target Start/End: Original strand, 9176836 - 9177035
Alignment:
Q  70 gcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttt 169  Q
    |||| ||||||  ||||||| ||||||||||||||||||| |||| ||  |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  9176836 gctttaaatttataacaaatctgcacccaaaaatatgtttctgtttttccctgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttt 9176935  T
Q  170 tccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||  || ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  9176936 tccagtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcctaaccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 9177035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 40091686 - 40091923
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||  |||    
T  40091686 cccttgtttcagccccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcactgaaa 40091785  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| ||||| |||||| |||| ||  ||||||||||| |||| |||||||||||| || ||||||||||||| || ||| | || |||||||||| |||    
T  40091786 aatacgtttacgttattcgctgtcagtgcaccatcgtgtcacgttgcgaccccatcatggcacgatttttccaatggcttacttc-aaaactgaaatctc 40091884  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgattat 238  Q
    | ||||||||||||| ||   ||| ||||||||||||||    
T  40091885 caatcgtgccacgttacccaaccaccgtgccacgattat 40091923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 24879051 - 24878836
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||| |||||||||||||||||||| |||||| ||  |||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  24879051 ccctagtttcagccccctctatctccaagtttactcggatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcacccaaa 24878952  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| ||||||| | ||||| || |||||||||||||| ||| | |||||||||||||||    ||||||| ||||| || ||||||||||||||    
T  24878951 aatacgtttctgttattcgatgccagcgtaccatcgtgccacgttgcaatcccatcgtgccacgaaaaatccagtgacttgcgtc-aaaactgaaacctc 24878853  T
Q  201 c-atcgtgccacgttgc 216  Q
    | |||||||||||||||    
T  24878852 caatcgtgccacgttgc 24878836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 619718 - 619932
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||| ||||||||||||| |||| |  |||||||    
T  619718 cccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaaaaaatctctacccaaa 619817  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| ||||||| || |||| |||||||| |||||||| |||||||||||||||||||||    |||| || |||||||| ||||||||||| ||    
T  619818 aatatgtttctgttattcgccgccagcgcaccattgtgccacgttgcgaccccatcgtgccacgaaaaatccaatgacttgcctc-aaaactgaaacatc 619916  T
Q  201 c-atcgtgccacgttg 215  Q
    | || |||||||||||    
T  619917 caattgtgccacgttg 619932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 9148315 - 9148087
Alignment:
Q  1 cccttgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccca 98  Q
    |||||| ||||||||||||||||||  |||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||||||||| |||||||     
T  9148315 cccttgcttcagccccctctatctctcaaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccc- 9148217  T
Q  99 aaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacc 198  Q
    |||||| |||| ||||||||||||        ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||  |||||||    
T  9148216 aaaatacgtttctgttatttgctg--------ccatcgtgccacgatgcaaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacc 9148126  T
Q  199 tcc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||| |||| |||||||||||  || ||||| ||||||||    
T  9148125 tccaatcgcgccacgttgcccagcaatcgtaccacgatt 9148087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 22046956 - 22047135
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| |||||||||  ||||||||| |||||||| |||||||||| |||||||||||||||||||||| |||| | |||    
T  22046956 cccttgtttcagccccctctatctccaagtttgctccgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgca-ctaaa 22047054  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||||| |||| ||  |||||| | ||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  22047055 aatatgtttctgtttttccctgccagcacaccatcgtgccacgatgcgatcccatcgtgcca-gatttttccagtgccttgc 22047135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 12 - 215
Target Start/End: Complemental strand, 24880502 - 24880299
Alignment:
Q  12 gccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttat 111  Q
    |||||||||||||| |||||| ||  |||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| ||||||||| |||| |    
T  24880502 gccccctctatctccaagtttactccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaaatacgtttct 24880403  T
Q  112 gttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcca-tcgtgcca 210  Q
    |||||| ||||||| ||||||||||||||||| ||| | ||||||||||| |||    ||||||| |||||||| |||||||||||||||| ||||||||    
T  24880402 gttattcgctgccagcgcaccatcgtgccacgttgcaatcccatcgtgccgcgaaaaatccagtgacttgcctc-aaaactgaaacctccattcgtgcca 24880304  T
Q  211 cgttg 215  Q
    |||||    
T  24880303 cgttg 24880299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 47274789 - 47274647
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||||| | |||||||||||| ||||||| ||||||||||    
T  47274789 cccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgcacccaaa 47274690  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacg 143  Q
    |||| |||||||||||| ||||||| |||||||||||||||||    
T  47274689 aatacgtttatgttattcgctgccatcgcaccatcgtgccacg 47274647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 7941383 - 7941133
Alignment:
Q  1 cccttgtttcagccccctctatctcaaa--gtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccca 98  Q
    |||||||||||||||||||||||||     ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  7941383 cccttgtttcagccccctctatctctcccggtttgctctgatacaacgtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccca 7941284  T
Q  99 aaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctc-aaaaactgaaac 197  Q
    |||||| |||| ||||||| |   ||| |||||||||||||                     ||| ||||||||||||||||||||| ||||||||||||    
T  7941283 aaaatacgtttctgttattcgtcaccagcgcaccatcgtgc---------------------caccatttttccagtgccttgcctcaaaaaactgaaac 7941205  T
Q  198 ctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||||||||||||||||  ||||||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  7941204 ctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 7941133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 11008932 - 11009075
Alignment:
Q  70 gcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttt 169  Q
    ||||||||| || ||||||| ||||||||||||||||||| |||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  11008932 gcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgttttttgctgccagtgcaccatcgtgccacgatgcgaccccatcgtgccacgatttt 11009031  T
Q  170 tccagtgccttgcct-caaaaactgaaacctccatcgtgccacg 212  Q
    |||||||||||||||  ||||| |||||||||||| ||||||||    
T  11009032 tccagtgccttgcctaaaaaaattgaaacctccattgtgccacg 11009075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 122 - 269
Target Start/End: Original strand, 16932213 - 16932360
Alignment:
Q  122 gccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgc 221  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||  ||    
T  16932213 gccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagc 16932312  T
Q  222 catcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    | ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  16932313 cgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 16932360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22801133 - 22801276
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||||||| ||||||| ||||| | ||    
T  22801133 cccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgcactc-aa 22801231  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgat 145  Q
    |||| |||| ||||||||||||||  |||||||||||||||||||    
T  22801232 aatacgtttctgttatttgctgccggcgcaccatcgtgccacgat 22801276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 18847215 - 18846923
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaat---------------------- 78  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| | |||||||||                          
T  18847215 cccttgtttcaaccccctctatctcaaagtttgttttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgctttaaat 18847116  T
Q  79 ttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 178  Q
    ||| ||||||| ||||||||||||||||||| |||| ||  | || | |||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  18847115 ttgtaacaaatctgcacccaaaaatatgtttctgtttttccccgcgagcgcaccatcgtgccacgatgcgaccccatcgtaccacgatttttccagtacc 18847016  T
Q  179 ttgcctcaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgccacgattatgc--ataaatctgatttgaagttaaatctcaca 269  Q
    ||||||| ||||||||||||||| ||||||||||| | ||   | |||||||||||||| |||  | ||||||||||| ||||||| |||||||    
T  18847015 ttgcctc-aaaactgaaacctccaatcgtgccacgattcccaacaatcgtgccacgattctgcagaaaaatctgattttaagttaactctcaca 18846923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 122 - 271
Target Start/End: Original strand, 22783170 - 22783319
Alignment:
Q  122 gccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgc 221  Q
    |||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||  ||    
T  22783170 gccagcgcaccatcgtgccacgatgagaccccatcgtgccatgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagc 22783269  T
Q  222 catcgtgccacgattatgcataaatctgatttgaagttaaatctcacatt 271  Q
     ||||| |||||||| |||| ||| ||||||| ||||||| |||||||||    
T  22783270 tatcgtaccacgattctgcagaaacctgattttaagttaactctcacatt 22783319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 127 - 271
Target Start/End: Original strand, 16934572 - 16934716
Alignment:
Q  127 cgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcg 226  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||  ||| |||    
T  16934572 cgcaccatcgtgccaggatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccatgttgcccagccgtcg 16934671  T
Q  227 tgccacgattatgcataaatctgatttgaagttaaatctcacatt 271  Q
    |||||||||| |||| ||| ||||||| ||||||| |||||||||    
T  16934672 tgccacgattctgcagaaacctgattttaagttaactctcacatt 16934716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 52942717 - 52942881
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgata--caaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccca 98  Q
    |||||||||||||||| |||||||||||||||  | |||||  |||||||||||||| |||| ||||| |  ||||||||||||||||||| |||||| |    
T  52942717 cccttgtttcagcccc-tctatctcaaagtttagtctgatatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatctgcaccaa 52942815  T
Q  99 aaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacg 164  Q
    ||||||||||||||||||| ||||||| |||| |||||||||||| || |||||||||||||||||    
T  52942816 aaaatatgtttatgttattcgctgccagcgcatcatcgtgccacgttgtgaccccatcgtgccacg 52942881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 122 - 269
Target Start/End: Original strand, 22780805 - 22780952
Alignment:
Q  122 gccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgc 221  Q
    |||| |||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||  ||    
T  22780805 gccagcgcaccatcgtgccacaatgagaccccatcgtgccatgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagc 22780904  T
Q  222 catcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
     ||||| |||||||| |||| ||| ||||||| ||||||| |||||||    
T  22780905 tatcgtaccacgattctgcagaaacctgattttaagttaactctcaca 22780952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 7 - 159
Target Start/End: Original strand, 8756527 - 8756679
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatg 106  Q
    |||||||||| |||||||||| |||| || ||||||||||||||||||| |||||||||| ||| ||| |||||||||||||| |||||| | |||||||    
T  8756527 tttcagccccttctatctcaaggtttactctgatacaaggtctatatttatagtaaaagtatcgtttataatttggaacaaatctgcaccgagaaatatg 8756626  T
Q  107 tttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtg 159  Q
    ||| ||||||| ||  ||| ||||||| | || |||| ||||| | |||||||    
T  8756627 tttctgttattcgcctccagcgcaccaacatggcacgttgcgatctcatcgtg 8756679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16934414 - 16934502
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||| || |||||||    
T  16934414 cccttgtatcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 16934502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44600109 - 44600174
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  44600109 cccttgtttcagccccctctatctcaaagtttgctttaatacaaggtctatatttatagtaaaagt 44600174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9176745 - 9176821
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaa 77  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || | ||||||||    
T  9176745 cccttgtttcagccccctctatctccaagtttgctttgatacaaggtctatatttatagtaaatgtcttgcttaaaa 9176821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16932060 - 16932148
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||   ||||||||| || |||||||    
T  16932060 cccttgtatcagccccctctatctcaaagtttgctttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaat 16932148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6764901 - 6764836
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  6764901 cccttgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 6764836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 22801262 - 22801346
Alignment:
Q  152 ccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||| |||||||||   ||||||||||||||||    
T  22801262 ccatcgtgccacgatttttccagttccttgcctc-aaaactgaaacctccaatcgtgtcacgttgcccaaccatcgtgccacgatt 22801346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40637136 - 40637071
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| |||||    
T  40637136 cccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtgaaagt 40637071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17662505 - 17662574
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||||| ||||||||||||||||||| ||||||||||    
T  17662505 cccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 17662574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 33415758 - 33415821
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    ||||||||||||||||||||||||||| |||| || |||||||| | |||||||||||||||||    
T  33415758 cccttgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttgtagtaaaa 33415821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 47868463 - 47868398
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||| ||||||||| ||||||||| ||||||||| ||||||||||||||||||| |||| |||||    
T  47868463 cccttctttcagccctctctatctccaagtttgctctgatacaaggtctatatttatagtgaaagt 47868398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8631690 - 8631759
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    ||||||||||||||||||| |||||||||| |||| |||||    
T  8631690 cccttgtttcagccccctctatctctctcaaagtttgctttgatacaaagtctatatttatagtgaaagt 8631759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 14787702 - 14787769
Alignment:
Q  1 cccttgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||  |||||||  | ||||||||||||||||||| ||||||||||    
T  14787702 cccttgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaagt 14787769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19095944 - 19095880
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  19095944 cccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 19095880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24446850 - 24446914
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  24446850 cccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 24446914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37313337 - 37313400
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    ||||||||||||||||||||||||||| |||| |||||||||||   |||||||| ||||||||    
T  37313337 cccttgtttcagccccctctatctcaaggtttactttgatacaaaacctatatttatagtaaaa 37313400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2485143 - 2485209
Alignment:
Q  1 cccttgtttcagccccct-ctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||| |||||||| ||| ||||||||||||| ||||||||||||||||||| |||| |||||    
T  2485143 cccttgttttagcccccttctagctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 2485209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 18537748 - 18537806
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||| |||| || ||||||||| ||||||||| |||||||||    
T  18537748 tttcagccccctctatctcaatgtttactctgatacaagatctatatttatagtaaaag 18537806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 22048492 - 22048542
Alignment:
Q  186 aaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    |||||||||||||||||||||||||||||||| | | ||||||||||||||    
T  22048492 aaaaactgaaacctccatcgtgccacgttgcccttcaatcgtgccacgatt 22048542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36378354 - 36378289
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||| |||||||||| ||||  | |||||||| |||||||||| ||||||||||    
T  36378354 cccttgtttcagccccgtctatctcaaggtttattctgatacaaagtctatatttatagtaaaagt 36378289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 24348280 - 24348211
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||   |||||||||||||||||||| ||||||||||    
T  24348280 cccttgtttcagccccctctatctctctcaaagtttagcttgatacaaggtctatatttatagtaaaagt 24348211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 12396117 - 12396180
Alignment:
Q  2 ccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||| |||||||||| |||| | || |||||| |||||||||| |||||||||    
T  12396117 ccttgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaag 12396180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 12401079 - 12401142
Alignment:
Q  2 ccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||| |||||||||| |||| | || |||||| |||||||||| |||||||||    
T  12401079 ccttgtttcagccccatctatctcaaggtttacatttatacaatgtctatatttatagtaaaag 12401142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 56030506 - 56030443
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    |||||||||||||||| |||||||||| |||| || |||||||| | |||||||| ||||||||    
T  56030506 cccttgtttcagccccttctatctcaaggtttactctgatacaaagcctatatttatagtaaaa 56030443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 5101056 - 5100994
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||| |||||||||||||| |||| |  |||| |||||||||||||| ||||||||||    
T  5101056 ttgtttcagtcccctctatctcaaggtttaccctgattcaaggtctatatttatagtaaaagt 5100994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 14633378 - 14633317
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||  ||||||||||||||| || ||||||||||||||||||| |||| |||||    
T  14633378 ttgtttcagccct-tctatctcaaagtttactctgatacaaggtctatatttatagtgaaagt 14633317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19322759 - 19322705
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatattt 55  Q
    ||||||||||| ||||||||||||||| |||| || ||||||||| |||||||||    
T  19322759 cccttgtttcatccccctctatctcaaggtttactctgatacaagatctatattt 19322705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 25357683 - 25357595
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgct--taaaatttggaacaaatttgcacccaaaaata 104  Q
    |||| |||||| |||| |||||||||||||||||||||| |||||||||| || ||  ||||| ||||||||||| ||  ||||||||||    
T  25357683 ctctctctcaaggtttactttgatacaaggtctatatttatagtaaaagtatccctcgtaaaa-ttggaacaaatctgagcccaaaaata 25357595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 38928451 - 38928513
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||| |||| || | |||||| | |||||||| |||||||||    
T  38928451 cttgtttcagccccctctatctcaaggtttactctaatacaaagcctatatttatagtaaaag 38928513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 41997552 - 41997494
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagta 61  Q
    |||||||||||||||| |||||||| |||| || |||||||| |||||||||| |||||    
T  41997552 cttgtttcagccccctttatctcaaggtttactctgatacaaagtctatatttatagta 41997494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15032807 - 15032872
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||| |||||||| |||| || || ||| | |||||||||| ||||||||||    
T  15032807 cccttgtttcagccccctttatctcaaggtttactctggtaccaagtctatatttatagtaaaagt 15032872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 16453371 - 16453306
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||   ||||||| |||||||| | |||||||| ||| ||||||    
T  16453371 cccttgtttcagccccctctatctctcggtttgctctgatacaaagcctatatttatagcaaaagt 16453306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3937480 - 3937543
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||| ||||||||||||| |||| || ||||| || |||||||||| |||||||||    
T  3937480 cccttgtttcagctccctctatctcaaggtttactctgata-aaagtctatatttatagtaaaag 3937543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 11008877 - 11008929
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||||||||||||||| |||||||||| | ||||||||| || |||||||    
T  11008877 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaat 11008929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38270257 - 38270321
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||| | |||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  38270257 cccttgtttcagcctcttctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 38270321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 16186118 - 16186173
Alignment:
Q  11 agccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||| |||||| |||| || ||||||||||| ||||||| ||||||||||    
T  16186118 agccccctctctctcaaggtttactctgatacaaggtttatatttatagtaaaagt 16186173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2891379 - 2891314
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttga-tacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||||||||||||| || |||| |  ||| ||||| |||||||||| |||||||||    
T  2891379 cccttgtttcagccccctctatcttaaggtttacactgattacaatgtctatatttatagtaaaag 2891314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 16689331 - 16689380
Alignment:
Q  127 cgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 176  Q
    ||||||||||||||||| |||||   ||||||| ||||||||||||||||    
T  16689331 cgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtg 16689380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 22134917 - 22134966
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||| |||||||||||   |||||||||||||||||||| ||||||||||    
T  22134917 ctctctctcaaagtttagcttgatacaaggtctatatttatagtaaaagt 22134966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 52942910 - 52942974
Alignment:
Q  172 cagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||||| |||||||| ||| ||||||||||| ||||||||||||||||   ||||||||||||||||    
T  52942910 cagtgacttgcctc-aaagctgaaacctccaatcgtgccacgttgcccaaccatcgtgccacgatt 52942974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 8529060 - 8529012
Alignment:
Q  127 cgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagt 175  Q
    |||||||||||| ||||||||| |  ||||||| |||||||||||||||    
T  8529060 cgcaccatcgtggcacgatgcggcttcatcgtggcacgatttttccagt 8529012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 12102140 - 12102088
Alignment:
Q  13 ccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||| ||||  | ||||||||| ||||||||| |||||||||    
T  12102140 ccccctctatctcaaggttttatctgatacaagatctatatttatagtaaaag 12102088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 40999234 - 40999306
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||| ||||| |||| || ||||| ||||| ||||||| |||||||| |  | |||||||||||||||||||    
T  40999234 ctctacctcaaggtttactctgatataaggtttatatttatagtaaaaataacccttaaaatttggaacaaat 40999306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 52043737 - 52043789
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||||||||||||||| |||||||||  || || |||| |||||||||||    
T  52043737 tgatacaaggtctatatttatagtaaaagcatccctaaaaaattggaacaaat 52043789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 22114574 - 22114842
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  22114574 cccttgtttcagccccttctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaa 22114673  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| ||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22114674 aatacgtttctgttattcgccgccatcgcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctcaaaaactgaaacctc 22114773  T
Q  201 catcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||||||||||||||   |||||||||||||||| | || ||| ||||||| ||||||| |||||||    
T  22114774 catcgtgccacgttgcccaaccatcgtgccacgattctacagaaacctgattttaagttaactctcaca 22114842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 5191641 - 5191374
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||    
T  5191641 cccttgtttcagccccctctatctccaagtttgcttagatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactcaaa 5191542  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| |||| || ||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  5191541 aatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgagatcccatcgtgccacgatttttccagtaccttgcctc-aaaactgaaacctc 5191443  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcac 268  Q
    | ||||||||||| ||||  || |||||||||||||| |||| ||||||||||| ||||||| ||||||    
T  5191442 caatcgtgccacgatgcccagcaatcgtgccacgattctgcagaaatctgattttaagttaactctcac 5191374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 18099439 - 18099707
Alignment:
Q  1 cccttgtttcagccccctctatctca-aagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaa 99  Q
    |||||||||||||||||||||||||  |||||| || ||||||||||||||||||  |||||||||| |||||||||||||||||||||| |||||||||    
T  18099439 cccttgtttcagccccctctatctctcaagtttactctgatacaaggtctatatta-tagtaaaagtctcgcttaaaatttggaacaaatctgcacccaa 18099537  T
Q  100 aaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacct 199  Q
    ||||| |||| | || || || |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  18099538 aaatacgtttctattgttcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgtcttgcctc-aaaactgaaacct 18099636  T
Q  200 cc-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    || ||||||||||||||||  ||||||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  18099637 ccaatcgtgccacgttgcccagccatcgtgccacgattttgcagaaacctgattttaagttaactctcaca 18099707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 1321429 - 1321194
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||||||||||| ||||| ||||    
T  1321429 cccttgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaa 1321330  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| |||| || ||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||  |||||||||    
T  1321329 aatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttgcctc-aaacttgaaacctc 1321231  T
Q  201 -catcgtgccacgttgccttgccatcgtgccacgatt 236  Q
      ||||||||||||||||  || ||||||||||||||    
T  1321230 taatcgtgccacgttgcccagcaatcgtgccacgatt 1321194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 5522884 - 5523119
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||||    
T  5522884 cccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcactcaaa 5522983  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| |||| || ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||||| |    
T  5522984 aatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtaccttgcctc-aaaactgaaaccac 5523082  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | ||||||||| ||||||  || ||| ||||||||||    
T  5523083 caatcgtgccatgttgcccagcaatcttgccacgatt 5523119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 26720536 - 26720301
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||| | |||||||||||||||||||| |||||  |||    
T  26720536 cccttatttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcactaaaa 26720437  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| |||| || ||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||  |||||||||    
T  26720436 aatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctc 26720338  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | ||| |||||||||||   |||||||||||||||||    
T  26720337 caatcctgccacgttgctcagccatcgtgccacgatt 26720301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 10956296 - 10956505
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||  | |||| || ||||||||||||||||||| ||||||||   | |||||||||||||||||||| |||||| |||    
T  10956296 cccttgtttcagccccctctatcttcatgtttactctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctgcacctaaa 10956395  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  10956396 aatacgtttatgttattcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcc-ccaaaactgaaacctc 10956494  T
Q  201 c-atcgtgcca 210  Q
    | |||||||||    
T  10956495 caatcgtgcca 10956505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 32264308 - 32264581
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtt----tgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacc 96  Q
    ||||||||| |||||||||||||||||||||    | || ||||||||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  32264308 cccttgtttgagccccctctatctcaaagttaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgcacc 32264407  T
Q  97 caaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaa 196  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||| ||| | |||||||||||||||    ||||||| |||||||||||||||||||    
T  32264408 caaaaatatgtttctgttattcgctgccagcgcaccatcgtgccacgttgcaagcccatcgtgccacgaaaaatccagtgacttgcctcaaaaactgaaa 32264507  T
Q  197 cctcc-atcgtgccacgttgccttgccatcgtgccacga-ttatgcataaatctgatttgaagttaaatctcacat 270  Q
    ||||| ||||||||||||| ||  ||||||||||||||| || |||| ||| ||||||| ||||||| ||||||||    
T  32264508 cctccaatcgtgccacgtt-cccagccatcgtgccacgatttctgca-aaacctgattttaagttaactctcacat 32264581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 3859516 - 3859350
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||    
T  3859516 cccttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcacccaaa 3859417  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatt 167  Q
    |||| |||||| ||||| || |||| |||||||||||||||||||| ||||||||||||||||||||    
T  3859416 aatacgtttatattattcgccgccagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatt 3859350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 11163138 - 11162924
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  11163138 cccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatcgtaaaagtttcgcttaaaatttggaacaaatctgcacccaaa 11163039  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| ||||||| || |||| |||||||||||||                     ||| ||||||||||||||||||||||||||||||||||||    
T  11163038 aatacgtttctgttattcgccgccagcgcaccatcgtgc---------------------cacaatttttccagtgccttgcctcaaaaactgaaacctc 11162960  T
Q  201 catcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    |||||||||||||||||  || ||||||||||||||    
T  11162959 catcgtgccacgttgcccagcaatcgtgccacgatt 11162924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 35777409 - 35777163
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||| || ||||||| ||||||||||    
T  35777409 cccttgtttcagccccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcacccaaa 35777310  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||||||||||||| |||||||||| ||||||||||||||||                     ||||||||||||||||||||  ||||||| |||||||    
T  35777309 aatatgtttatgtt-tttgctgccagcgcaccatcgtgccac---------------------gatttttccagtgccttgcccaaaaaactaaaacctc 35777232  T
Q  201 catcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||||||||||||||  ||  ||||||||||||| |||| |||||| |||| ||||||| |||||||    
T  35777231 catcgtgccacgttgcccagctgtcgtgccacgattctgcagaaatctaattttaagttaactctcaca 35777163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 70 - 269
Target Start/End: Original strand, 6063808 - 6064006
Alignment:
Q  70 gcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttt 169  Q
    ||||||||| || ||||||| ||||||||||||||||||| | || ||  | ||||   |||||||||||||||||||||||||||||||||||||||||    
T  6063808 gcttaaaatctgtaacaaatctgcacccaaaaatatgttt-tatttttatccgccagtccaccatcgtgccacgatgcgaccccatcgtgccacgatttt 6063906  T
Q  170 tccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    | ||||||||||||  ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||||    
T  6063907 ttcagtgccttgcccaaaaaactaaaacctccattgtgccacgttgccttgccatcgtgccacgattctgcataaacctgattttaagttaattctcaca 6064006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 10958592 - 10958767
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||  | |||| || ||||||||||||||||||| ||||||||   | |||||||||||||||||||| |||||| |||    
T  10958592 cccttgtttcagccccctctatctttatgtttactctgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctgcacctaaa 10958691  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 176  Q
    |||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10958692 aatacgtttctgttattggctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 10958767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 11170392 - 11170178
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  11170392 cccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaa 11170293  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| ||||||| || |||| ||||| |||| |||||                     |||||||||||||||||||||||||||| ||||||||    
T  11170292 aatatgtttctgttattcgccgccagcgcacaatcgagccac---------------------gatttttccagtgccttgcctcaaaaaccgaaacctc 11170214  T
Q  201 catcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    |||||||||||||||||  || | ||||||||||||    
T  11170213 catcgtgccacgttgcccagcaaccgtgccacgatt 11170178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 18097169 - 18097422
Alignment:
Q  1 cccttgtttcagccccctctatctca-aagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaa 99  Q
    ||||||||| |||||||||||||||  |||||| || ||||||||||||||||||| |||||||||| |||||||||||||| ||||||| |||||||||    
T  18097169 cccttgtttgagccccctctatctctcaagtttactatgatacaaggtctatatttatagtaaaagtctcgcttaaaatttgaaacaaatctgcacccaa 18097268  T
Q  100 aaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacct 199  Q
    ||||| |||| ||||||| || |||||                 |||||||||||||||||||||||||||||  ||||||||||| |||||||||||||    
T  18097269 aaatacgtttctgttattcgccgccact----------------atgcgaccccatcgtgccacgatttttcctatgccttgcctc-aaaactgaaacct 18097351  T
Q  200 cc-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    || ||||||||||||||||  ||||||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  18097352 ccaatcgtgccacgttgcccagccatcgtgccacgattttgcagaaacctgattttaagttaactctcaca 18097422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 45882927 - 45882752
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||| ||||| || ||||||||||||||||||| |||||||||| |||||||||||||  ||||||| ||||||||||    
T  45882927 cccttgtttcagccccctctatctcatagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaattttcaacaaatctgcacccaaa 45882828  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 176  Q
    |||| |||| ||||||| | || || ||||||||||||||||| ||| | ||||||||| ||||||||||||||||    
T  45882827 aataggtttctgttattcgttgtcagcgcaccatcgtgccacgttgcaatcccatcgtggcacgatttttccagtg 45882752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 70 - 252
Target Start/End: Complemental strand, 5899657 - 5899476
Alignment:
Q  70 gcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttt 169  Q
    ||||||||| || ||||||| || ||||||||||| |||| | || ||  |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  5899657 gcttaaaatctgtaacaaatctgtacccaaaaatacgttt-tatttttatctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatttt 5899559  T
Q  170 tccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatt 252  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||| | | ||||||||| ||||||||| ||| ||||||    
T  5899558 tccagtgccttgcctaaaaaactaaaacatccatcgtgccacgttgcccttcaatcgtgccatgattatgcagaaacctgatt 5899476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 7 - 236
Target Start/End: Complemental strand, 24177261 - 24177032
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatg 106  Q
    ||||||||||||||| ||||| |||| || ||||||||||||||||||| || ||||||| || ||||||||||||||||||| |||||  ||||||| |    
T  24177261 tttcagccccctctagctcaatgtttactatgatacaaggtctatatttataataaaagtatcccttaaaatttggaacaaatctgcacttaaaaatacg 24177162  T
Q  107 tttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcg 205  Q
    |||||||| || ||  ||| ||||||||||||||||  ||||| |||||||||||||  ||||||||||| ||||| || | |||||||||  || ||||    
T  24177161 tttatgtttttcgcctccaacgcaccatcgtgccacattgcgatcccatcgtgccacattttttccagtgacttgcttc-agaactgaaacaaccaatcg 24177063  T
Q  206 tgccacgttgccttgccatcgtgccacgatt 236  Q
    |||||||||||| ||| | ||||||||||||    
T  24177062 tgccacgttgccctgcaaacgtgccacgatt 24177032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 122 - 270
Target Start/End: Complemental strand, 50493823 - 50493675
Alignment:
Q  122 gccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgc 221  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||  ||    
T  50493823 gccagcgcaccatcgtgccacgatgagactccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagc 50493724  T
Q  222 catcgtgccacgattatgcataaatctgatttgaagttaaatctcacat 270  Q
     |||||||||||||| |||| ||| ||||||| ||||||| ||||||||    
T  50493723 tatcgtgccacgattctgcagaaacctgattttaagttaactctcacat 50493675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 122 - 269
Target Start/End: Complemental strand, 38210214 - 38210067
Alignment:
Q  122 gccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgc 221  Q
    |||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||  ||    
T  38210214 gccagcgcactatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagc 38210115  T
Q  222 catcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    | ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  38210114 cgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 38210067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 48361940 - 48362082
Alignment:
Q  2 ccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaa 101  Q
    ||||||||||||||||| ||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||| ||||||    
T  48361940 ccttgtttcagccccctgtatctcaaagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaa 48362039  T
Q  102 atatgtttatgttatttgctgccaccgcaccatcgtgccacga 144  Q
    ||| |||| || |||| ||||||| ||||||||| ||||||||    
T  48362040 atacgtttctgctattcgctgccagcgcaccatcatgccacga 48362082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 140 - 253
Target Start/End: Original strand, 10192401 - 10192513
Alignment:
Q  140 cacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatg 239  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||  |    
T  10192401 cacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaa-ctgaaacctccatcgtgccacgttgccttgcgatcgtgccacgattccg 10192499  T
Q  240 cataaatctgattt 253  Q
    ||||||||||||||    
T  10192500 cataaatctgattt 10192513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 128 - 269
Target Start/End: Original strand, 53896613 - 53896754
Alignment:
Q  128 gcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgt 227  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||||  || |||||    
T  53896613 gcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtaccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagcaatcgt 53896712  T
Q  228 gccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||||| |||| ||| ||||||| ||||||| |||||||    
T  53896713 gccacgattctgcagaaacctgattttaagttaactctcaca 53896754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 70 - 269
Target Start/End: Complemental strand, 5886182 - 5885983
Alignment:
Q  70 gcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttt 169  Q
    ||||||||| || |||||||||||||||||||||| |||| | || ||  |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  5886182 gcttaaaatctgtaacaaatttgcacccaaaaatacgttt-tatttttatctgccagcgcaccatcgtaccacgatgcgaccccatcgtgccacgatttt 5886084  T
Q  170 tccagtgccttgcctcaaaaactgaaacctccatcgtgccacg-ttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcac 268  Q
    |||||| |||||||| ||||||| |||| |||||||||||||| ||||  | | |||||||||||||| || | ||| || |||| ||||||| ||||||    
T  5886083 tccagtaccttgcctaaaaaactaaaacatccatcgtgccacgtttgcgcttcaatcgtgccacgattctgtaaaaacctaattttaagttaactctcac 5885984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 22 - 146
Target Start/End: Original strand, 10191603 - 10191727
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgct 121  Q
    ||||||||||||||  |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| || |||    
T  10191603 tctcaaagtttgctccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcactcaaaaatatgtttctgtttttcgct 10191702  T
Q  122 gccaccgcaccatcgtgccacgatg 146  Q
    |||| ||||||||||||||||||||    
T  10191703 gccagcgcaccatcgtgccacgatg 10191727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 24979695 - 24979552
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||| || ||||||||||| ||||||| |||| ||||| |  ||||||||||||||||||| |||||| |||    
T  24979695 cccttgtttcagccccctctatctcaaagtttactctgatacaaggtatatatttatagtgaaagtattacttaaaatttggaacaaatctgcaccaaaa 24979596  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacga 144  Q
    ||||||||||||||||| ||| ||| || |||||||||||||||    
T  24979595 aatatgtttatgttattcgctaccagcgtaccatcgtgccacga 24979552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 10084658 - 10084807
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacc 96  Q
    |||||||| ||||||||||||||||    ||||||||||  |||||||||||||||||| |||||||||  |||||||||||||||||||||| |||||     
T  10084658 cccttgttccagccccctctatctctctcaaagtttgctccgatacaaggtctatatttatagtaaaagcatcgcttaaaatttggaacaaatctgcact 10084757  T
Q  97 caaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatg 146  Q
    ||||||||||||| |||| || ||||||| ||||||||||||||||||||    
T  10084758 caaaaatatgtttctgtttttcgctgccagcgcaccatcgtgccacgatg 10084807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 70 - 212
Target Start/End: Complemental strand, 25388795 - 25388654
Alignment:
Q  70 gcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttt 169  Q
    ||||||||| || ||||||| ||| ||||||||||||||| | || ||  |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  25388795 gcttaaaatctgtaacaaatctgctcccaaaaatatgttt-tatttttatctgccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttt 25388697  T
Q  170 tccagtgccttgcctcaaaaactgaaacctccatcgtgccacg 212  Q
    ||||||||||||||  ||||||| |||||||||||||||||||    
T  25388696 tccagtgccttgcccaaaaaactaaaacctccatcgtgccacg 25388654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 140 - 253
Target Start/End: Original strand, 10085481 - 10085593
Alignment:
Q  140 cacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatg 239  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||  |    
T  10085481 cacgatgtgatcccatcgtgccacgatttttccagtgccttgcctcaaaa-ctgaaacctccatcgtgccacgttgccttgcgatcatgccacgattccg 10085579  T
Q  240 cataaatctgattt 253  Q
    ||||||||||||||    
T  10085580 cataaatctgattt 10085593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 18162639 - 18162508
Alignment:
Q  15 ccctctatctcaaagtttgctt-tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttatgt 113  Q
    ||||||||||| |||||| ||  ||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||| |||| |||    
T  18162639 ccctctatctccaagtttactcatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgt 18162540  T
Q  114 tatttgctgccaccgcaccatcgtgccacgat 145  Q
    |||| ||||||| |||||||||||| ||||||    
T  18162539 tattcgctgccagcgcaccatcgtggcacgat 18162508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 32219083 - 32218941
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||||||| || | ||||| |  ||||||||||||||||||| ||||||||||    
T  32219083 cccttgtttcagccccctctatctcaaagtttagtcagatacaaggtctatatttatactgaaagtattacttaaaatttggaacaaatctgcacccaaa 32218984  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacg 143  Q
    |||| |||| | ||||| ||||||| |||||||||||||||||    
T  32218983 aatacgtttctcttattcgctgccagcgcaccatcgtgccacg 32218941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 15780848 - 15780747
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  15780848 cccttgtttcagccccctctatctccaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaa 15780749  T
Q  101 aa 102  Q
    ||    
T  15780748 aa 15780747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 152 - 270
Target Start/End: Complemental strand, 38889875 - 38889756
Alignment:
Q  152 ccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgca-taaatctga 250  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||  ||| || |    
T  38889875 ccatcgtgccacgatttttccaatgccttgcctaaaaaactgaaacctccatcgtgccacgttgccttgccatcgtaccacgattctgcagaaaacctaa 38889776  T
Q  251 tttgaagttaaatctcacat 270  Q
    ||| ||||||| ||||||||    
T  38889775 ttttaagttaactctcacat 38889756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 6066065 - 6066210
Alignment:
Q  1 cccttgtttcagcccc-ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaa 99  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||| || ||||||| ||| |||||    
T  6066065 cccttgtttcagcccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagttctgcttaaaatctgtaacaaatctgctcccaa 6066164  T
Q  100 aaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatg 146  Q
    |||||  ||| | || ||  | |||| ||||||||||||||||||||    
T  6066165 aaatacattt-tatttttatccgccagcgcaccatcgtgccacgatg 6066210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 12268237 - 12268338
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaa 102  Q
    ||||||||||| |||||||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||  |||||    
T  12268237 cttgtttcagctccctctatctcaaagtttactctgatacaagttctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcactgaaaaa 12268336  T
Q  103 ta 104  Q
    ||    
T  12268337 ta 12268338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6063715 - 6063805
Alignment:
Q  1 cccttgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||| | ||||||||| || |||||||    
T  6063715 cccttgtttcagccccctctatctctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaat 6063805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38890028 - 38889939
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    |||||||||||||||||||||||||    ||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38890028 cccttgtttcagccccctctatctctctcaaagtttgct---atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaat 38889939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 152 - 269
Target Start/End: Original strand, 6719532 - 6719651
Alignment:
Q  152 ccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc---atcgtgccacgttgccttgccatcgtgccacgattatgcataaatct 248  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||    ||||||||||| |||| | | ||||||||||||||| ||| ||| ||    
T  6719532 ccatcgtgccacgatttttccagtgcattgcct-aaaaactgaaacctctccaatcgtgccacgatgcccttcaatcgtgccacgattaagcagaaacct 6719630  T
Q  249 gatttgaagttaaatctcaca 269  Q
    ||||| ||||||| |||||||    
T  6719631 gattttaagttaattctcaca 6719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4308550 - 4308615
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  4308550 cccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 4308615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 50493987 - 50493899
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||| |||||   ||||||||| || |||||||    
T  50493987 cccttgtttcagccccctctatctctcagtttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaat 50493899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 7606880 - 7606963
Alignment:
Q  186 aaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||||||| |||| ||| ||||||| ||||||| |||||||    
T  7606880 aaaaactgaaacctccatcgtgccacgttgcccagccatcgtgtcacgattctgcagaaacctgattttaagttaactctcaca 7606963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 53896475 - 53896553
Alignment:
Q  11 agccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||   ||||||||| || |||||||    
T  53896475 agccccctctatctcaaagtttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaat 53896553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35918218 - 35918283
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| |||||    
T  35918218 cccttgtttcagccccctctatctcaaaatttgctatgatacaaggtctatatttatagtgaaagt 35918283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 51727275 - 51727340
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||| |||||    
T  51727275 cccttgtttcagccccctttatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 51727340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 38889936 - 38889861
Alignment:
Q  70 gcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgat 145  Q
    ||||||||| || ||||||| ||||||||||||||||||| ||||||| || |||| |||||||||||||||||||    
T  38889936 gcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgat 38889861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43226074 - 43226009
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||| ||||||||| |||||||| |||||||||| |||| |||||    
T  43226074 cccttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaagt 43226009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 1313397 - 1313333
Alignment:
Q  2 ccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||| |||| || |||| |||||||||||||| ||||||||||    
T  1313397 ccttgtttcagccccctctatctcaaggtttactctgattcaaggtctatatttatagtaaaagt 1313333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 6719396 - 6719468
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    |||| |||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||| || |||||||    
T  6719396 ctctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaat 6719468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 28761697 - 28761813
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgca-cccaa 99  Q
    ||||||||||| ||||||||||||||| |||| || |||| ||| |||||||||| |||||||||| || || | || |||||||||| |  || |||||    
T  28761697 cccttgtttcaaccccctctatctcaaggtttactctgatgcaaagtctatatttatagtaaaagtatccctcataaattggaacaaaatctcagcccaa 28761796  T
Q  100 aaatatgtttatgttat 116  Q
    |||||||||| ||||||    
T  28761797 aaatatgtttttgttat 28761813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 6066195 - 6066254
Alignment:
Q  152 ccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccac 211  Q
    ||||||||||||||| ||||||||||||||||  ||||||| ||||||||||||||||||    
T  6066195 ccatcgtgccacgatgtttccagtgccttgcccaaaaaactaaaacctccatcgtgccac 6066254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 70 - 145
Target Start/End: Original strand, 6719471 - 6719546
Alignment:
Q  70 gcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgat 145  Q
    ||||||||| || | ||||| ||||||||||||||||||| ||||||| || |||| |||||||||||||||||||    
T  6719471 gcttaaaatctgtatcaaatctgcacccaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgat 6719546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27635896 - 27635959
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    ||||||||||||||||||||||||||| |||| || | || |||||||||||||||||||||||    
T  27635896 cccttgtttcagccccctctatctcaaggtttactctaattcaaggtctatatttgtagtaaaa 27635959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 43228277 - 43228214
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||| |||| |||||    
T  43228277 cttgtttcagccccctctatctccaagtttgctctgatacaatgtctatatttatagtgaaagt 43228214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 51675024 - 51675087
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    ||||||||||||||||||||||||||| |||| | ||||||||| |||||||||| ||||||||    
T  51675024 cccttgtttcagccccctctatctcaacgtttacattgatacaacgtctatatttatagtaaaa 51675087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6561798 - 6561744
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatattt 55  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||||||||||    
T  6561798 cccttgtttcagccccctctatctcaaggtttactctgatacaaggtctatattt 6561744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 53915765 - 53915830
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||| || |||| || |||| |||||||||||||| ||||||||||    
T  53915765 cccttgtttcagccccctctatcttaaggtttactctgattcaaggtctatatttatagtaaaagt 53915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1626952 - 1627016
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  1626952 cccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 1627016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13420441 - 13420506
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||| ||| |||||||| ||||||||||||||||   |||||||| ||||||||||    
T  13420441 cccttgtttcagcctcctatatctcaaggtttgctttgatacaaaacctatatttatagtaaaagt 13420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 53597228 - 53597164
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||| |||| |||||||||| |||| || ||||||||||||||||||| ||||||||||    
T  53597228 cccttgtttcatcccc-tctatctcaaggtttactctgatacaaggtctatatttatagtaaaagt 53597164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 13893347 - 13893287
Alignment:
Q  35 tttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcac 95  Q
    |||||||||| |||||||||| ||||||||||  | ||||||||||||||||||| |||||    
T  13893347 tttgatacaatgtctatatttatagtaaaagtaacccttaaaatttggaacaaatctgcac 13893287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 23633447 - 23633383
Alignment:
Q  2 ccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||| ||||| ||||||||||| |||| || |||||||| |||||||||| ||||||||||    
T  23633447 ccttgttttagccctctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagt 23633383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28137564 - 28137628
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| || |||||||| |  ||||||| |||||||||    
T  28137564 cccttgtttcagccccctctatctcaaggtttactctgatacaacgcatatatttatagtaaaag 28137628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 43423732 - 43423796
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||||||||| |||||| |||| |  |||||||| |||||||||| |||||||||    
T  43423732 cccttgtttcagccccctctttctcaaggtttacagtgatacaatgtctatatttatagtaaaag 43423796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 47701864 - 47701928
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||||||| |||||||| |||| |  |||||||| |||||||||| |||||||||    
T  47701864 cccttgtttcagccccctttatctcaaggtttacactgatacaatgtctatatttatagtaaaag 47701928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 880723 - 880785
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||| |||||||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  880723 cttgtttcagacccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 880785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 271
Target Start/End: Complemental strand, 3859365 - 3859315
Alignment:
Q  221 ccatcgtgccacgattatgcataaatctgatttgaagttaaatctcacatt 271  Q
    ||||||||||||||||||||| ||| ||||||| ||||||| |||||||||    
T  3859365 ccatcgtgccacgattatgcagaaacctgattttaagttaactctcacatt 3859315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 5886242 - 5886196
Alignment:
Q  32 tgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaat 78  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||||||    
T  5886242 tgctctgataaaaggtctatatttatagtaaaagtttcgcttaaaat 5886196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 28181006 - 28180948
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  28181006 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 28180948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 51943356 - 51943294
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||| ||||||||||| | |||| || |||| |||||||||||||| ||||||||||    
T  51943356 ttgtttcagcaccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagt 51943294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 53917936 - 53917998
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||| ||||||| ||||  | |||| |||||||||||||| ||||||||||    
T  53917936 ttgtttcagccccctccatctcaaggtttaatctgattcaaggtctatatttatagtaaaagt 53917998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 5899717 - 5899660
Alignment:
Q  32 tgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    |||| ||||| ||||||||||||| |||||||||| ||||||||||| || |||||||    
T  5899717 tgctctgataaaaggtctatatttatagtaaaagtctcgcttaaaatctgtaacaaat 5899660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6484373 - 6484308
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| | |||||||| ||| ||||||    
T  6484373 cccttgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagcaaaagt 6484308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 46966940 - 46967017
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttatgtt 114  Q
    |||||||| || ||||||| ||||||||||  | ||||||||||||||||||| ||||   |||||||||||| ||||    
T  46966940 tgatacaatgtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcattgaaaaatatgtttctgtt 46967017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3314672 - 3314608
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||| ||||||||||||||||||||| |||| |  ||||||||  ||||||||| |||||||||    
T  3314672 cccttatttcagccccctctatctcaaggtttacactgatacaatatctatatttatagtaaaag 3314608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4104164 - 4104233
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||    ||||||||||||||||||| ||||||||||    
T  4104164 cccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 4104233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 5927033 - 5927097
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||| ||||||||||| |||| |   ||||||| |||||||||| |||||||||    
T  5927033 cccttgtttcagccctctctatctcaaggtttacaccgatacaatgtctatatttatagtaaaag 5927097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 25388850 - 25388798
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||||||||||||||| |||||||||| | ||||||||| || |||||||    
T  25388850 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaat 25388798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28100310 - 28100374
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| | || || |||||||| |  ||||||| |||||||||    
T  28100310 cccttgtttcagccccctctatctcaagggttactctgatacaacgcttatatttatagtaaaag 28100374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 53468724 - 53468788
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||||||| ||||| || |||| |  |||||||| |||||||||| |||||||||    
T  53468724 cccttgtttcagccccctttatctaaaggtttacactgatacaatgtctatatttatagtaaaag 53468788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3306787 - 3306724
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    |||||||||||||||||| |||||| | |||| |  |||||||| |||||||||| ||||||||    
T  3306787 cccttgtttcagccccctatatctctaggtttacactgatacaatgtctatatttatagtaaaa 3306724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 36011814 - 36011751
Alignment:
Q  2 ccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||| |||||||| |||| |  | |||||| |||||||||| |||||||||    
T  36011814 ccttgtttcagccccctttatctcaaggtttacactaatacaatgtctatatttatagtaaaag 36011751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43421684 - 43421747
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    ||||||||||| |||| |||||||||| |||| |  |||||||| |||||||||| ||||||||    
T  43421684 cccttgtttcaaccccttctatctcaaggtttacactgatacaatgtctatatttatagtaaaa 43421747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 4560537 - 4560599
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||| |||| || |||||||  ||||||| || |||| |||||    
T  4560537 ttgtttcagccccctctatctcaatgtttactatgatacatagtctatacttatagtgaaagt 4560599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 6231436 - 6231374
Alignment:
Q  2 ccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    |||||||||||||| |||||||||||  ||| |  |||||||| |||||||||| ||||||||    
T  6231436 ccttgtttcagcccgctctatctcaagatttacactgatacaatgtctatatttatagtaaaa 6231374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 53591181 - 53591119
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||| |||||||||||| |||| |  | |||||| |||||||||| |||||||||    
T  53591181 cttgtttcagcctcctctatctcaaggtttacacttatacaatgtctatatttatagtaaaag 53591119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 4308676 - 4308725
Alignment:
Q  127 cgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 176  Q
    |||||||||||| |||||| ||| || |||||| ||||||||||||||||    
T  4308676 cgcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagtg 4308725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 890040 - 890104
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||  |||||||||||| |||| |  ||||||||  ||||||||| |||||||||    
T  890040 cccttgtttcagcttcctctatctcaaggtttacactgatacaatatctatatttatagtaaaag 890104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28102271 - 28102335
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| | || || | |||||| |  ||||||| |||||||||    
T  28102271 cccttgtttcagccccctctatctcaagggttactctaatacaacgcttatatttatagtaaaag 28102335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 177; Significance: 4e-95; HSPs: 78)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 38882114 - 38881878
Alignment:
Q  1 cccttgtttcagccccc-tctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaa 99  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  38882114 cccttgtttcagcccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaa 38882015  T
Q  100 aaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacct 199  Q
    ||||| |||| ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38882014 aaatacgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactaaaacct 38881915  T
Q  200 ccatcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||||||||||||||||||  || ||||||||||||||    
T  38881914 ccatcgtgccacgttgcccagcaatcgtgccacgatt 38881878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 3 - 261
Target Start/End: Complemental strand, 4236635 - 4236378
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaa 102  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||| | ||||    
T  4236635 cttgtttcagccccctttatctccaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc-aaaa 4236537  T
Q  103 tatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc- 201  Q
    || |||| |||| ||  |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||||||     
T  4236536 tacgtttctgtttttccctgccagcgcaccatcgtgccacgatgcgatcccattgtgccacgatttttccagtgccttgcct-taaaactgaaacctcca 4236438  T
Q  202 atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaa 261  Q
    ||||||||||||||||  ||||||||||||| ||| |||| ||||||||||| |||||||    
T  4236437 atcgtgccacgttgcccagccatcgtgccacaattctgcagaaatctgattttaagttaa 4236378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 16776166 - 16775930
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttg-tagtaaaagtttcgcttaaaatttggaacaaatttgcacccaa 99  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||  |||||||||| |||||||||||||||||||||| | ||| |||    
T  16776166 cccttgtttcagccccctctatctcaaagtttgctcagatacaaggtctatattttatagtaaaagtatcgcttaaaatttggaacaaatcttcactcaa 16776067  T
Q  100 aaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacct 199  Q
    |||||||||| |||| || | ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||  ||||||||    
T  16776066 aaatatgtttctgtttttcgatgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgattttttcagtgctttgcctc-aaacttgaaacct 16775968  T
Q  200 cc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    || |||||| ||||||||||||||||||||||||||||    
T  16775967 ccaatcgtgtcacgttgccttgccatcgtgccacgatt 16775930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 25921744 - 25921993
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  25921744 cccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaa 25921843  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctc-aaaaactgaaacct 199  Q
    |||| |||| ||||||| |||| || ||||||||||||||||                     |||||||||||||||||||||| ||||||||||||||    
T  25921844 aatacgtttctgttattcgctgtcagcgcaccatcgtgccac---------------------gatttttccagtgccttgcctcaaaaaactgaaacct 25921922  T
Q  200 ccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcacat 270  Q
    |||||||||||||||| |   |||||||||||||||| |||| ||| ||||||| ||||||| ||||||||    
T  25921923 ccatcgtgccacgttgtccaaccatcgtgccacgattctgcagaaacctgattttaagttaactctcacat 25921993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 2174927 - 2174680
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||| || ||||| |||||||||  |||||||||||||||||||||| ||||| ||||    
T  2174927 cccttgtttcagccccctctatctccaagtttgctctgatacaaggcctgtatttatagtaaaagcatcgcttaaaatttggaacaaatctgcactcaaa 2174828  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| |||| || |||||||  ||||||                     |||||||||||||||||||||||||||||| |||||||||||||||    
T  2174827 aatatgtttctgtttttcgctgccagtgcacca---------------------tcgtgccacgatttttccagtgccttgcctaaaaaactgaaacctc 2174749  T
Q  201 catcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  2174748 catcgtgccacgttgccttgccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 2174680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 21948034 - 21947803
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||| ||||||||||| ||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  21948034 cccttgtttcagcccc-tctatctcaaaatttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaa 21947936  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| ||||||| |||||||   ||||||||||||||| ||| | ||||||||||||||     ||||||| ||| |||| ||||||||||||||    
T  21947935 aatatgtttctgttattcgctgcca---caccatcgtgccacgttgcaatcccatcgtgccacgtaaagtccagtgacttacctc-aaaactgaaacctc 21947840  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | |||||| |||||||||| |||||||||||||||||    
T  21947839 caatcgtgtcacgttgcctagccatcgtgccacgatt 21947803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 31545088 - 31544798
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaa------------- 87  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| || |||||                 
T  31545088 cccttgtttcagccccctttatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaat 31544989  T
Q  88 ---------atttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 178  Q
             || ||||||||||||||||||| |||| ||  | |||| |||||||||||| | ||||| |||||||||||||||||||||||||||||||    
T  31544988 ctgtaataaatctgcacccaaaaatatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttttccagtgcc 31544889  T
Q  179 ttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||  ||||||| ||||||||||||||||||||||||  || |||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  31544888 ttgcccaaaaaactaaaacctccatcgtgccacgttgcccagctatcgtgccacgattttgcagaaacctgattttaagttaactctcaca 31544798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 74 - 269
Target Start/End: Original strand, 34477438 - 34477632
Alignment:
Q  74 aaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 173  Q
    ||||| || ||||||| ||||||||||||||||||| | || ||  | |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34477438 aaaatctgtaacaaatctgcacccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 34477536  T
Q  174 gtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||| |||  |||||| ||||||| |||||||    
T  34477537 gtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacttgattttaagttaactctcaca 34477632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 37 - 178
Target Start/End: Original strand, 21684768 - 21684909
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcg 136  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| ||||||| ||||| ||||||||||||| |||| || ||||||| ||||||||||    
T  21684768 tgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcg 21684867  T
Q  137 tgccacgatgcgaccccatcgtgccacgatttttccagtgcc 178  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21684868 tgccacgatgcgaccccatcgtgccacgatttttccagtgcc 21684909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 39 - 269
Target Start/End: Complemental strand, 39798058 - 39797849
Alignment:
Q  39 atacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtg 138  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||| |||||||         
T  39798058 atacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgcacccaaaaatatgtttctgttattcgctgccagcgcacca----- 39797964  T
Q  139 ccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattat 238  Q
                    |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  39797963 ----------------tcgtgccatgatttttccggtgccttgcctcaaaaactgaaacctccatcatgccacgttgcccagccatcgtgccacgattat 39797880  T
Q  239 gcataaatctgatttgaagttaaatctcaca 269  Q
    ||| ||| ||||||| ||||||| |||||||    
T  39797879 gcagaaacctgattttaagttaactctcaca 39797849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 20507733 - 20507968
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||||||| |||||||||| |||||||||  ||||||||||| ||| ||||||    
T  20507733 cccttgtttcagccccctctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaatcttggaacaaatctgctcccaaa 20507832  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| ||||||| ||||| | |||||| |||||||| | ||| | |||||||||||||||    |||| || |||||||| |||||| |||||||    
T  20507833 aatatgtttctgttattcgctgctagcgcaccttcgtgccatgttgcaatcccatcgtgccacgaaaaatccaatgacttgcctc-aaaactaaaacctc 20507931  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | ||||||| ||||||||   | ||||||||||||||    
T  20507932 caatcgtgctacgttgcccaactatcgtgccacgatt 20507968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 31542628 - 31542442
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||||||||||||||||||| |||| ||  | |||| |||||||||||| | ||||| |||||||||||||||||||||||||||||||||||    
T  31542628 aacaaatctgcacccaaaaatatgtttctgtttttatccgccagcgcaccatcgtgtctcgatgagaccccatcgtgccacgatttttccagtgccttgc 31542529  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| ||||||||||||||||||||||||  || |||||| ||||||| |||| ||| ||||||| ||||||| |||||||    
T  31542528 ccaaaaaactaaaacctccatcgtgccacgttgcccagctatcgtgtcacgattttgcagaaacctgattttaagttaactctcaca 31542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 10749690 - 10749505
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10749690 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 10749592  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||||||||||||| ||  |||  ||| ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  10749591 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 10749505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 2818607 - 2818731
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||| ||    
T  2818607 cccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccgaa 2818706  T
Q  101 aatatgtttatgttatttgctgcca 125  Q
    |||| |||| ||||||| |||||||    
T  2818707 aatacgtttttgttattcgctgcca 2818731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 36402599 - 36402741
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||| |||| || ||||| ||||||||||||| |||||||||| ||||||||||||| |||||||| ||||||||||    
T  36402599 cccttgtttcagccccctctatctcaacgtttactctgatataaggtctatatttatagtaaaagtatcgcttaaaattt-gaacaaatctgcacccaaa 36402697  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacga 144  Q
    |||| |||| ||||||| | ||||| ||||||||||||||||||    
T  36402698 aatacgtttctgttattcgttgccaacgcaccatcgtgccacga 36402741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 10757145 - 10756960
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10757145 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 10757047  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||||||||||||| ||  |||  ||| |||||| |||||| |||| ||| ||||||| ||||||| |||||||    
T  10757046 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgctacgattgtgcagaaacctgattttaagttaactctcaca 10756960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 15354880 - 15355065
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15354880 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 15354978  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||||||||||||| ||  |||  ||  ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  15354979 ccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 15355065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 15357156 - 15357341
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15357156 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 15357254  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||||||||||||| ||  |||  ||  ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  15357255 ccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 15357341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 152 - 269
Target Start/End: Original strand, 34479855 - 34479972
Alignment:
Q  152 ccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgat 251  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||| ||| |||||    
T  34479855 ccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacctccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaacctgat 34479954  T
Q  252 ttgaagttaaatctcaca 269  Q
    || ||||||| |||||||    
T  34479955 tttaagttaactctcaca 34479972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 12556194 - 12556337
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||| |||| ||||||| || || ||||    
T  12556194 cccttatttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaattttgaaacaaatctgtacacaaa 12556293  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacga 144  Q
    ||||  ||| ||||||| ||||||| |||| |||||||||||||    
T  12556294 aatacatttctgttattcgctgccagcgcatcatcgtgccacga 12556337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 31466252 - 31466389
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaat 103  Q
    ||||||||||||| | |||||||||||||  | ||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||    
T  31466252 ttgtttcagccccttttatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtgtcgcttaaaatttggaacaaatctgcacccaaaaat 31466351  T
Q  104 atgtttatgttatttgctgccaccgcaccatcgtgcca 141  Q
    |  |||||| ||||  ||||||  ||||||||||||||    
T  31466352 acatttatggtattccctgccagtgcaccatcgtgcca 31466389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 6756499 - 6756359
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaat 103  Q
    |||||||||| ||||||||||||||||||  | ||||||||| ||||||||  |||||||||| |  |||||||||||||| |||| |||||| ||||||    
T  6756499 ttgtttcagctccctctatctcaaagtttaatatgatacaagatctatattaatagtaaaagtataacttaaaatttggaataaatctgcaccaaaaaat 6756400  T
Q  104 atgtttatgttatttgctgccaccgcaccatcgtgccacga 144  Q
    | |||| ||||||| ||||||| ||||||||||||||||||    
T  6756399 acgtttctgttattcgctgccagcgcaccatcgtgccacga 6756359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 83 - 270
Target Start/End: Complemental strand, 23665019 - 23664833
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  23665019 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttc 23664921  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcacat 270  Q
    |  ||||| | ||| |||||||||||| ||  |||  ||  ||||||||||||| |||| ||| ||||||| ||||||| ||||||||    
T  23664920 ccaaaaaaataaaaactccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacat 23664833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 83 - 270
Target Start/End: Original strand, 23793568 - 23793754
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  23793568 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttc 23793666  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcacat 270  Q
    |  ||||| | ||| |||||||||||| ||  |||  ||  ||||||||||||| |||| ||| ||||||| ||||||| ||||||||    
T  23793667 ccaaaaaaataaaaactccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcacat 23793754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 23667294 - 23667109
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  23667294 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgcctttc 23667196  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||| | ||| |||||||||||| ||  |||  ||  ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  23667195 ccaaaaaaataaaaactccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 23667109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31542743 - 31542655
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| || |||||||    
T  31542743 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaat 31542655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 31179807 - 31179897
Alignment:
Q  122 gccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacg 212  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||||| |||||||||||||||||||    
T  31179807 gccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgtcttgcccaaaaaactaaaacctccatcgtgccacg 31179897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 659829 - 659746
Alignment:
Q  152 ccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  659829 ccatcgtgccacgatttttccagtgacttgcctc--aaactgaaacctccaatcgtgccacgttgcctagccatcgtgccacgatt 659746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 152 - 269
Target Start/End: Original strand, 38960487 - 38960604
Alignment:
Q  152 ccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgat 251  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||| |   |||  ||| ||||||||||||| |||| ||| |||||    
T  38960487 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcaaagcccagccgtcgtgccacgattgtgcagaaacctgat 38960586  T
Q  252 ttgaagttaaatctcaca 269  Q
    || ||||||| |||||||    
T  38960587 tttaagttaactctcaca 38960604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31179642 - 31179707
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  31179642 cccttgtttcagctccctctatctcaaagtttgctttgatacaatgtctatatttatagtaaaagt 31179707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 134 - 214
Target Start/End: Original strand, 659850 - 659929
Alignment:
Q  134 tcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgtt 214  Q
    ||||||||| |||||||| |||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||||    
T  659850 tcgtgccacaatgcgacctcatcgtgccacgatttttccagtgacttgcctc--aaactgaaacctccaatcgtgccacgtt 659929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10529370 - 10529435
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  10529370 cccttgtttcaacccactctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 10529435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 18186489 - 18186589
Alignment:
Q  171 ccagtgccttgcctcaaaaactgaaacctcca-tcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||  |||||||| |||||||| |||| |||  |||||| ||||||| |||||||    
T  18186489 ccagtgacttgcctcaaaa-ctgaaacctccaatcgtgccacgttgcccagccatcgtaccacgattctgcagaaacttgattttaagttaactctcaca 18186587  T
Q  270 tt 271  Q
    ||    
T  18186588 tt 18186589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39854491 - 39854427
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  39854491 cccttgtttcagcccc-tctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 39854427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 26097735 - 26097676
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||| ||||||||||    
T  26097735 tttcagccccctctatctcaaagtttactctgattcaaggtctatatttatagtaaaagt 26097676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 20043056 - 20042994
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||| ||||||| |||||||| | |||||||| |||||||||    
T  20043056 cttgtttcagccccctctatctcaaggtttgctatgatacaaagcctatatttatagtaaaag 20042994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 36208582 - 36208524
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||| |||||||||    
T  36208582 tttcagccccctctatctcaaggtttactctgatacaaggtctatatttatagtaaaag 36208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 2818729 - 2818813
Alignment:
Q  152 ccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcca-tcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||||||||||||||    ||||||| |||||||||||| |||||||||||| |||||||| ||||||| |||||||||||||||||    
T  2818729 ccatcgtgccacgaaaaatccagtgacttgcctcaaaa-ctgaaacctccaatcgtgccatgttgcctagccatcgtgccacgatt 2818813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 3373332 - 3373377
Alignment:
Q  21 atctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  3373332 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 3373377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18596655 - 18596590
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||| ||| |||| || |||| |||||||||||||| ||||||||||    
T  18596655 cccttgtttcagccccctctatcccaaggtttactctgattcaaggtctatatttatagtaaaagt 18596590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4410069 - 4410000
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||||| ||||||||||||||||||| |||| |||||    
T  4410069 cccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 4410000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 17072891 - 17072827
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  17072891 cccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 17072827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20045018 - 20044954
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||||||||| |||||| ||||||| |||||||| | |||||||| |||||||||    
T  20045018 cccttgtttcagccccctctgtctcaaggtttgctctgatacaaagcctatatttatagtaaaag 20044954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 23665125 - 23665081
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  23665125 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 23665081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 23793462 - 23793506
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  23793462 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 23793506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25904111 - 25904047
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  25904111 cccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 25904047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 15354777 - 15354818
Alignment:
Q  25 caaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  15354777 caaagtttgctttgatacaaggtctatatttatagtaaaagt 15354818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 15357053 - 15357094
Alignment:
Q  25 caaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  15357053 caaagtttgctttgatacaaggtctatatttatagtaaaagt 15357094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26098522 - 26098587
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||| ||||||||||||||||||| | |||| || |||| |||||||||||||| ||||||||||    
T  26098522 cccttatttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagt 26098587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40221530 - 40221465
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||| |||| || |||  ||| |||||||||| ||||||||||    
T  40221530 cccttgtttcagccccctctatctcaaggtttactctgagtcaatgtctatatttatagtaaaagt 40221465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 20504316 - 20504419
Alignment:
Q  133 atcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcca-tcgtgccacgttgccttgccatcgtgcca 231  Q
    ||||||||||| ||| | |||||||||||||||    |||| || |||||||||||| || ||||||||| |||||||||||||||  || |||||||||    
T  20504316 atcgtgccacgttgcaatcccatcgtgccacgaaaaatccattgacttgcctcaaaa-ctaaaacctccaatcgtgccacgttgcccagctatcgtgcca 20504414  T
Q  232 cgatt 236  Q
    |||||    
T  20504415 cgatt 20504419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 21684905 - 21684969
Alignment:
Q  205 gtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||||||||||  ||||||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  21684905 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 21684969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 23667400 - 23667356
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||||||||||| |||| |||||    
T  23667400 tctcaaagtttgctttgatacaaggtctatatttatagttaaagt 23667356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 23742057 - 23742101
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||    
T  23742057 tctcaaagtttgctttgacacaaggtctatatttatagtaaaagt 23742101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 38960334 - 38960378
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||    
T  38960334 tctccaagtttgctttgatacaaggtctatatttatagtaaaagt 38960378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6661453 - 6661512
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagt 60  Q
    ||||||||||| ||| ||||||||||| |||| || ||||||||||||||||||| ||||    
T  6661453 cccttgtttcaaccctctctatctcaaggtttactctgatacaaggtctatatttatagt 6661512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 269
Target Start/End: Original strand, 31466391 - 31466496
Alignment:
Q  164 gatttttccagtgccttgcctcaaaaactgaaacctc-catcgtgccacgttgccttgccatcgtgccacgatt-atgcataaatctgatttgaagttaa 261  Q
    ||||||||||||| |||||||| | ||||||||| || ||||||||||||||||| | | ||||||||||||||  |||| ||| ||||||| |||||||    
T  31466391 gatttttccagtgacttgcctc-ataactgaaacatctcatcgtgccacgttgcccttcaatcgtgccacgattcctgca-aaacctgattttaagttaa 31466488  T
Q  262 atctcaca 269  Q
     |||||||    
T  31466489 ctctcaca 31466496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 10757245 - 10757207
Alignment:
Q  28 agtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  10757245 agtttgctttgatacaaggtctatatttatagtaaaagt 10757207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 34530939 - 34531001
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||| |||| || |||| ||| ||||||||||  ||||||||    
T  34530939 cttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttacagtaaaag 34531001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18511483 - 18511539
Alignment:
Q  1 cccttgtttcagccccctcta--tctcaaagtttgctttgatacaaggtctatattt 55  Q
    |||||||||||||||||||||  |||||||||||  | |||||||||||||||||||    
T  18511483 cccttgtttcagccccctctatctctcaaagtttagtctgatacaaggtctatattt 18511539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41585977 - 41586042
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||| |||||||| |||| || ||||||||   |||||||| ||||||||||    
T  41585977 cccttgtttcagccccctttatctcaaggtttactctgatacaaaacctatatttatagtaaaagt 41586042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 10474595 - 10474655
Alignment:
Q  2 ccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaa 62  Q
    ||||||||||||||||||||| |||| |||| |  |||||||| |||||||||| ||||||    
T  10474595 ccttgtttcagccccctctatttcaaggtttacactgatacaatgtctatatttatagtaa 10474655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18469019 - 18468950
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||    ||||||||||||||||||| ||||||||||    
T  18469019 cccttgtttcagccccctctatctctctcaaagtttatcatgatacaaggtctatatttatagtaaaagt 18468950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 29748313 - 29748261
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||||||||||||||| |||||||||  || || ||||||||||||||||    
T  29748313 tgatacaaggtctatatttatagtaaaagcatccctcaaaatttggaacaaat 29748261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 34477379 - 34477431
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||||||||||| ||| |||||||||| ||||||||||| || |||||||    
T  34477379 tgatacaaggtctatttttatagtaaaagtctcgcttaaaatctgtaacaaat 34477431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18509589 - 18509652
Alignment:
Q  1 cccttgtttcagcccc-ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaa 63  Q
    |||||||||||||||| || | |||||||||||  | ||||||||||||||||||| |||||||    
T  18509589 cccttgtttcagcccctctatctctcaaagtttagtctgatacaaggtctatatttatagtaaa 18509652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 36402747 - 36402845
Alignment:
Q  171 ccagtgccttgcctcaaaaactgaaacctcca-tcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||| |||||||||||| |||||||||||| |||||| | ||||||  |||||||||||  |||| |||| ||| || |||| ||||||| |||||||    
T  36402747 ccagtgacttgcctcaaaa-ctgaaacctccaatcgtgctatgttgcccagccatcgtgcctagattctgcagaaacctaattttaagttaactctcaca 36402845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 37706057 - 37706116
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||| |||| |  |||||||| |||||||||| ||| ||||||    
T  37706057 tttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagcaaaagt 37706116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 18466692 - 18466625
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    |||||||||||||||||||||||||    |||||||    ||||||||||||||||||| ||||||||    
T  18466692 cccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaa 18466625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 24126862 - 24126800
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||| |||||||||| |||| |  ||||| || |||||||||| |||||||||    
T  24126862 cttgtttcagccccatctatctcaaggtttacactgatataatgtctatatttatagtaaaag 24126800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 10749767 - 10749730
Alignment:
Q  29 gtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||| || |||||||    
T  10749767 gtttgctttgatacaaggtctatatttatactaaaagt 10749730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 39854366 - 39854317
Alignment:
Q  127 cgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 176  Q
    |||||||||||||||||||||||  | | |||| ||||||||||||||||    
T  39854366 cgcaccatcgtgccacgatgcgattcaaccgtgacacgatttttccagtg 39854317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 42238096 - 42238047
Alignment:
Q  127 cgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 176  Q
    ||||||||||||||||| |||||   ||||||| ||||||||||||||||    
T  42238096 cgcaccatcgtgccacgttgcgatttcatcgtggcacgatttttccagtg 42238047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 1240219 - 1240171
Alignment:
Q  128 gcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 176  Q
    ||||||||||| |||||| ||| || |||||| ||||||||||||||||    
T  1240219 gcaccatcgtggcacgattcgatccaatcgtggcacgatttttccagtg 1240171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 4409946 - 4409890
Alignment:
Q  120 ctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 176  Q
    |||||| |||||||||||| |||||| ||| || || ||| ||||||||||||||||    
T  4409946 ctgccatcgcaccatcgtggcacgattcgatccaattgtggcacgatttttccagtg 4409890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 31179885 - 31179933
Alignment:
Q  221 ccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  31179885 ccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 31179933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31472884 - 31472948
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||| ||||||||||||||||| |||| |  | |||||| ||| |||||| |||||||||    
T  31472884 cccttgttttagccccctctatctcaaggtttacactaatacaatgtccatatttatagtaaaag 31472948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 34479740 - 34479792
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||||||||||| ||| ||||||| || ||||||||||| || |||||||    
T  34479740 tgatacaaggtctatttttatagtaaaggtctcgcttaaaatctgtaacaaat 34479792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 172; Significance: 4e-92; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 14507446 - 14507716
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| |||||||||||||||||||||| | ||| ||||    
T  14507446 cccttgttttagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctacactcaaa 14507545  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctc--aaaaactgaaacc 198  Q
    ||||||||| |||| || |||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||  |||||||||||||    
T  14507546 aatatgtttctgtttttcgctggcagcgcaccatcgtgccacgatgcgaccccatcgtgccaccatttttccagtgccttgtatcaaaaaaactgaaacc 14507645  T
Q  199 tccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||||||||||||||||  ||||||||||||||||| |||| ||||||||||| ||||||| |||||||    
T  14507646 tccatcgtgccacgttgcccagccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 14507716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 19227679 - 19227915
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||    
T  19227679 cccttgtttgagccccctttatctcaaagtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcacccaaa 19227778  T
Q  101 a-atatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacct 199  Q
    | |||||||| ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19227779 aaatatgtttctgttattcgccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaattgaaacct 19227878  T
Q  200 ccatcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||||| ||||||||||||   ||||||||||||||||    
T  19227879 ccatcatgccacgttgcccaaccatcgtgccacgatt 19227915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 4 - 261
Target Start/End: Original strand, 11983303 - 11983558
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaat 103  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||||||| ||||| |||||||    
T  11983303 ttgtttcagccccctctatctccaagtttgctctgatacaaggtctatatttatagtaaaagtttcgtttaaaatttgaaacaaatctgcactcaaaaat 11983402  T
Q  104 atgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccat 203  Q
    |||||| |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | |||||||||||||||    
T  11983403 atgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg-cttacctc-acaactgaaacctccat 11983500  T
Q  204 cgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaa 261  Q
    ||| ||| ||||||   ||||||| |||||||| |||| ||| ||||||| |||||||    
T  11983501 cgtaccatgttgcccaaccatcgtaccacgattctgcagaaacctgattttaagttaa 11983558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 8995522 - 8995288
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||| |||||||||||||||  ||||| || ||||||||| ||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  8995522 cccttgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaa 8995423  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    | || |||| |||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8995422 a-tacgtttctgttatttgctgtcagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgcc-caaaaactgaaacctc 8995325  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | ||||||||||||||||  |||||||||||||||||    
T  8995324 caatcgtgccacgttgcccagccatcgtgccacgatt 8995288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 9019969 - 9019735
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||| |||||||||||||||  ||||| || ||||||||| ||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  9019969 cccttgttttagccccctctatctctcagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaa 9019870  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    | || |||| |||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9019869 a-tacgtttctgttatttgctgtcagcgcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgcc-caaaaactgaaacctc 9019772  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | ||||||||||||||||  |||||||||||||||||    
T  9019771 caatcgtgccacgttgcccagccatcgtgccacgatt 9019735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 15530393 - 15530628
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||| ||||||||||||||||||  ||||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||    
T  15530393 cccttgcttcagccccctctatctcccagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaacctgcacccaaa 15530492  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| | | |||  |||||| | |||||||||||||||||||| ||||||||| |||||| ||||| ||||| ||||||| |||  |||||||||    
T  15530493 aatatgtttctataattcactgccagcacaccatcgtgccacgatgcggccccatcgtaccacgaattttcgagtgctttgcctc-aaacttgaaacctc 15530591  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | || |||||||||| ||  |||||||||||||||||    
T  15530592 caattgtgccacgttacccagccatcgtgccacgatt 15530628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 30729099 - 30729284
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||| |||| || ||||||||| ||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||    
T  30729099 cccttgtttcagccccctctatctcaaggtttactctgatacaagatctatatttatagtaaaagtaccgcttaaaatttggaacaaatctgcacccaaa 30729198  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctca 186  Q
    |||| |||| ||||||| ||||||| ||||| ||||||||||| || |||||||||||| |||||  ||||||||| |||||||||    
T  30729199 aatacgtttctgttattcgctgccagcgcactatcgtgccacgttgtgaccccatcgtggcacgaaatttccagtgacttgcctca 30729284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 122 - 269
Target Start/End: Original strand, 26068735 - 26068882
Alignment:
Q  122 gccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgc 221  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||||||||    
T  26068735 gccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcatgccacgttgccttgc 26068834  T
Q  222 catcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    | ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  26068835 cgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 26068882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 33308870 - 33308685
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33308870 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 33308772  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||||||||||||||||  |||  ||| ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  33308771 ccaaaaaactaaaacctccatcgtgccacgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 33308685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 33311139 - 33310954
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33311139 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 33311041  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||||||||||||||||  |||  ||| ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  33311040 ccaaaaaactaaaacctccatcgtgccacgaagcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 33310954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 15532952 - 15533137
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||||| |  ||||||||||||||||||| |||||| |||    
T  15532952 cccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtataacttaaaatttggaacaaatctgcacctaaa 15533051  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctca 186  Q
    ||||||||| | ||||||||| ||| |||||||| ||| |||| ||||| | ||||||| ||| |  ||||||||| |||||||||    
T  15533052 aatatgtttctcttatttgctaccagcgcaccattgtgacacgttgcgatctcatcgtggcacaaaatttccagtgacttgcctca 15533137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 15541411 - 15541596
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||||| |  ||||||||||||||||||| |||||| |||    
T  15541411 cccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtgtaacttaaaatttggaacaaatctgcacctaaa 15541510  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctca 186  Q
    ||||||||| || |||| ||||||| || |||||||||||||| ||||| | ||||||| || ||  ||||||||| | |||||||    
T  15541511 aatatgtttctgctattcgctgccagcgtaccatcgtgccacgttgcgatctcatcgtggcatgaaatttccagtgacgtgcctca 15541596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 122 - 269
Target Start/End: Original strand, 26066464 - 26066611
Alignment:
Q  122 gccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgc 221  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||  || |||| ||||||||||||||||||||||||||||    
T  26066464 gccagcgcaccattgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaataactaaaacctccatcgtgccacgttgccttgc 26066563  T
Q  222 catcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    | ||||||||||||| | || ||| ||||||| ||||||| |||||||    
T  26066564 cgtcgtgccacgattctacagaaacctgattttaagttaactctcaca 26066611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 29755094 - 29755279
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29755094 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 29755192  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||||||||||||| ||  |||  ||| ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  29755193 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 29755279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 1072148 - 1072291
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||| || ||||||||||||||| || |||||||| |||||||||| |||||||||| | |||||||||||||||||||| ||||||||||    
T  1072148 cccttgtttcagctccttctatctcaaagtttactctgatacaatgtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcacccaaa 1072247  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacga 144  Q
    |||| |||||||||||| ||||||  || |||||||||||||||    
T  1072248 aatacgtttatgttattcgctgcctacgtaccatcgtgccacga 1072291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 4816612 - 4816749
Alignment:
Q  74 aaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 173  Q
    ||||| || ||||||| |||||| |||||||||||| |||| |||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  4816612 aaaatctgtaacaaatctgcaccaaaaaatatgtttctgtt-tttgctaccagcacaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 4816710  T
Q  174 gtgccttgcctcaaaaactgaaacctcc-atcgtgccacg 212  Q
    || ||||||||| ||||||||||||||| |||||||||||    
T  4816711 gtaccttgcctc-aaaactgaaacctccaatcgtgccacg 4816749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 32280039 - 32279897
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||| |||||||| |||||| || ||||||||||||||||| | ||| |||||| |||||||||||||||||||||| ||||| ||||    
T  32280039 cccttgtttcagcccc-tctatctccaagtttactatgatacaaggtctatatatataggaaaagtatcgcttaaaatttggaacaaatctgcactcaaa 32279941  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacga 144  Q
    ||||  ||||||||||| || |||| ||||||||||||||||||    
T  32279940 aatacatttatgttattcgccgccagcgcaccatcgtgccacga 32279897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12195786 - 12195851
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12195786 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 12195851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 24192635 - 24192733
Alignment:
Q  70 gcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgattt 168  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||| ||| ||||| ||||||  ||| | ||||||||| ||||||||    
T  24192635 gcttaaaatttggaacaaatttgcactgaaaaatatgtttctgttattcgctgccagcgccccatcatgccacattgcaatcccatcgtggcacgattt 24192733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28241592 - 28241657
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| |||||    
T  28241592 cccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaagt 28241657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14459036 - 14459090
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatattt 55  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14459036 cccttatttcagccccctctatctcaaagtttgctctgatacaaggtctatattt 14459090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 24191538 - 24191636
Alignment:
Q  70 gcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgattt 168  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||| ||| ||||| | ||||  ||| | ||||||||| ||||||||    
T  24191538 gcttaaaatttggaacaaatttgcactgaaaaatatgtttctgttattcgctgccagcgccccatcataccacattgcaatcccatcgtggcacgattt 24191636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1230520 - 1230585
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  1230520 cccttgtttcaaccctctctatctcaaagtttgctatgatacaaggtctatatttatagtgaaagt 1230585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 26066319 - 26066387
Alignment:
Q  21 atctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||| || |||||||    
T  26066319 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 26066387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 26068590 - 26068658
Alignment:
Q  21 atctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||| || |||||||    
T  26068590 atctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaat 26068658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17852585 - 17852520
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||| |||| || |||| ||| |||||||||| ||||||||||    
T  17852585 cccttgtttcagccccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaagt 17852520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13057237 - 13057173
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  13057237 cccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 13057173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24338719 - 24338783
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  24338719 cccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 24338783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 32447587 - 32447651
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| || |||||||| | |||||||| |||||||||    
T  32447587 cccttgtttcagccccctctatctcaaggtttactctgatacaaagcctatatttatagtaaaag 32447651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15346434 - 15346347
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaa 88  Q
    |||||| |||||||||||||||||||| |||| |  |||||||| |||||||||| |||||||||| || || | || ||||||||||    
T  15346434 cccttggttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagtatccctcataaattggaacaaa 15346347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 29754983 - 29755032
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||| ||||| |||||||||||||||||||||||||||| ||||||||||    
T  29754983 ctctctctcagagtttgctttgatacaaggtctatatttatagtaaaagt 29755032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 3630139 - 3630199
Alignment:
Q  5 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||||||||||||  ||| | ||||||||| |||||||||| |||||||||    
T  3630139 tgtttcagccccctctatctcaagttttacattgatacaatgtctatatttatagtaaaag 3630199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25477317 - 25477253
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| ||||||||||  ||||||||    
T  25477317 cccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttacagtaaaag 25477253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 3028127 - 3028186
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||| | |||||||  |||| |||||||||||||||||||||| ||||||||||    
T  3028127 tttcagccccttttatctcatggtttactttgatacaaggtctatatttatagtaaaagt 3028186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3390422 - 3390357
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||| |||||||||| ||||    |||||||| |||||||||| ||||||||||    
T  3390422 cccttgtttcagccccgtctatctcaaggtttatactgatacaatgtctatatttatagtaaaagt 3390357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20915627 - 20915717
Alignment:
Q  1 cccttgtttcagccccctctatctca---aagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    |||||||||||||||||||||||||    || || || | |||||||||||||||||| |||||||||| | ||||||||| || |||||||    
T  20915627 cccttgtttcagccccctctatctctctcaatttagcct-gatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaat 20915717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 26084867 - 26084818
Alignment:
Q  127 cgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 176  Q
    |||||||||||||||||||||||  | |||||| ||||||||||||||||    
T  26084867 cgcaccatcgtgccacgatgcgattcaatcgtggcacgatttttccagtg 26084818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 4816552 - 4816604
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaat 89  Q
    ||||||||||||||||||| |||||||||| | ||||||||| || |||||||    
T  4816552 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaat 4816604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 12186345 - 12186429
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctt-tgatacaaggtctatatttgtagtaaaagt-ttcgcttaaaatttggaacaaat 89  Q
    |||||||||| |||||||||| |||| | | ||||||||||| ||||||| ||||||||||  ||||| |||| |||||||||||    
T  12186345 tttcagccccttctatctcaaggtttacatgtgatacaaggtttatatttatagtaaaagtaatcgctaaaaaattggaacaaat 12186429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 3234003 - 3234065
Alignment:
Q  2 ccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||| || |||| |  |||||||| |||||||||| |||||||||    
T  3234003 ccttgtttcagccccctctatcttaaggtttacactgatacaa-gtctatatttatagtaaaag 3234065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 19704862 - 19704905
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagt 60  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||    
T  19704862 ctctctctcaaagtttgctctgatacaaggtctatatttatagt 19704905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3632209 - 3632271
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaa 63  Q
    ||||||||||| | ||||||||||||| |||| |  |||||||| |||||||||| |||||||    
T  3632209 cccttgtttcaactccctctatctcaaggtttacactgatacaatgtctatatttatagtaaa 3632271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 33308966 - 33308932
Alignment:
Q  32 tgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||| ||||||||||    
T  33308966 tgctttgatacaaggtctatatttatagtaaaagt 33308932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 33311235 - 33311201
Alignment:
Q  32 tgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||| ||||||||||    
T  33311235 tgctttgatacaaggtctatatttatagtaaaagt 33311201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 15367086 - 15366963
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgc-------tttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgc 93  Q
    |||||| |||||||||||||||||||| |||| |       | |||||||| |||||||||| |||||||||| || || | || |||||||||| |  |    
T  15367086 cccttggttcagccccctctatctcaaggtttacaccgatgtctgatacaatgtctatatttatagtaaaagtatccctcataaattggaacaaaatatc 15366987  T
Q  94 a-cccaaaaatatgtttatgttat 116  Q
    | |||||||||| |||||||||||    
T  15366986 agcccaaaaatacgtttatgttat 15366963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 26932857 - 26932906
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||| |||||||||||||| ||| ||||||||||||||| |||| |||||    
T  26932857 ctctctctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 26932906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13039797 - 13039733
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||| ||| |||||||| |||| |  ||||||||  ||||||||| |||||||||    
T  13039797 cccttgtttcagcctcctatatctcaaggtttacactgatacaatatctatatttatagtaaaag 13039733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 18318048 - 18318004
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||| ||| ||||||||||||||| |||| |||||    
T  18318048 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 18318004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22490682 - 22490618
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  | || ||| |||||||||| | |||||||    
T  22490682 cccttgtttcagccccctctatctcaaggtttacactaattcaatgtctatatttatggtaaaag 22490618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 169; Significance: 2e-90; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 2897 - 2670
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  2897 cccttgtttcagccccctctatctcaaagtttgctctgatacaagttctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaa 2798  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  2797 aatacgtttatgttattcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtaccttgcctc-aaaactgaaacctc 2699  T
Q  201 c-atcgtgccacgttgccttgccatcgtg 228  Q
    | ||||||||||||||||| || ||||||    
T  2698 caatcgtgccacgttgcctagcaatcgtg 2670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 2e-87; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 27827050 - 27826815
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||||||||| ||||| ||||    
T  27827050 cccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaa 27826951  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| |||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  27826950 aatatgtttttgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcttcaaaaaatgaaacctc 27826851  T
Q  201 catcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    |||||||||||||||||  || ||||||||||||||    
T  27826850 catcgtgccacgttgcccagcaatcgtgccacgatt 27826815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 27829361 - 27829126
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| |||||||||| |||||||||||||||||||||| ||||| ||||    
T  27829361 cccttgtttcagccccctctatctccaagtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaa 27829262  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||| |||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||| |||||||||    
T  27829261 aatatgtttttgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgttttgcctcaaaaaatgaaacctc 27829162  T
Q  201 catcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    |||||||||||||||||  || ||||||||||||||    
T  27829161 catcgtgccacgttgcccagcaatcgtgccacgatt 27829126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 12517295 - 12517532
Alignment:
Q  1 cccttgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccca 98  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||| ||||| | |||||||||| |||||||||||||||||||||||||||| ||    
T  12517295 cccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtatatatatatagtaaaagtatcgcttaaaatttggaacaaatttgcactca 12517394  T
Q  99 aaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacc 198  Q
    ||||||||||| |||| || ||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  12517395 aaaatatgtttctgtttttcgctgccagcacaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtacattgcctc-aaaactgaaacc 12517493  T
Q  199 tcc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  12517494 tccaatcgtgccacgttgccttgccatcgtgccacgatt 12517532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 14807815 - 14807556
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||| | ||    
T  14807815 cccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc-aa 14807717  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| ||||||||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  |||||||||    
T  14807716 aatacgtttatgtttttcgctgccagcgcaccaccgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctc 14807618  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaa 261  Q
    | |||||| |||||||||   ||||| |||||||||| |||| ||| ||||||| |||||||    
T  14807617 caatcgtgtcacgttgcccaaccatcatgccacgattctgcagaaacctgattttaagttaa 14807556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 15072774 - 15072506
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  15072774 cccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcacccaaa 15072675  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| ||||||| ||||||| ||||||||| ||||||| ||||| ||||||||| ||||||||||| |||| ||||| || ||||||||||||||    
T  15072674 aatacgtttctgttattcgctgccagcgcaccatcatgccacgttgcgatcccatcgtgacacgatttttctagtggcttgcttc-aaaactgaaacctc 15072576  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt-atgcataaatctgatttgaagttaaatctcaca 269  Q
    | |||||| |||||||||  ||||||||| |||||||  ||||  |||||||||| ||||||| |||||||    
T  15072575 caatcgtgtcacgttgcccagccatcgtgtcacgattcctgca-gaatctgattttaagttaactctcaca 15072506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 15068045 - 15067785
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||| |||||||||||||||   |||||||||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  15068045 cccttgtttcagccccttctatctcaaagtttaggttgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaa 15067946  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| ||||||| ||||||| ||||||||||||||||| ||||| ||||||||| || ||||||||||||| ||||| || ||||||||||||||    
T  15067945 aatacgtttttgttattcgctgccagcgcaccatcgtgccacgttgcgatcccatcgtggcatgatttttccagtggcttgcttc-aaaactgaaacctc 15067847  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt-atgcataaatctgatttgaagttaa 261  Q
    | ||||||||| ||||||  |||||| ||||||||||  |||| ||||||||||| |||||||    
T  15067846 caatcgtgccatgttgcccagccatcttgccacgattcctgca-aaatctgattttaagttaa 15067785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 18812957 - 18812668
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatt--------------------- 79  Q
    |||||||||||||| |||||||||| ||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||                         
T  18812957 cccttgtttcagcctcctctatctccaagtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttgtaacaaatctgctcaaaat 18812858  T
Q  80 -tggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 178  Q
     || ||||||| ||||||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18812857 ctgtaacaaatctgcacccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 18812759  T
Q  179 ttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||| ||||||| ||||||||||||||||||||||||  ||| ||||||||||||| | || ||| ||||||| ||||||| |||||||    
T  18812758 ttgcctaaaaaactaaaacctccatcgtgccacgttgcccagccgtcgtgccacgattcttcagaaacctgattttaagttaactctcaca 18812668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 44720907 - 44720617
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttg-------- 92  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||| || ||||||| ||            
T  44720907 cccttgtttcagccccctctatctcaaagtttgctttgatataaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcttaaaat 44720808  T
Q  93 --------------cacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 178  Q
                  ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  44720807 ctgtaacaaatctgcacccaaaaatatgtttctgtt-tttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtacc 44720709  T
Q  179 ttgcctcaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgccacgattatgca-taaatctgatttgaagttaaatctcaca 269  Q
    ||||||| ||||||||||||||| | ||||||||  ||||  || ||| |||||||||| ||||  ||| ||||||| ||||||| |||||||    
T  44720708 ttgcctc-aaaactgaaacctccaaacgtgccacaatgcccagcaatcatgccacgattctgcagaaaacctgattttaagttaactctcaca 44720617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 4424081 - 4423938
Alignment:
Q  2 ccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaa 101  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||||||| ||||| |||||    
T  4424081 ccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctgtatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaa 4423982  T
Q  102 atatgtttatgttatttgctgccaccgcaccatcgtgccacgat 145  Q
    |||||||| | || || ||||||| |||||||||||||||||||    
T  4423981 atatgtttctatttttcgctgccagcgcaccatcgtgccacgat 4423938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 18810772 - 18810483
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatt--------------------- 79  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||                         
T  18810772 cccttgtttcagccccctctatctccaagtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttgtaacaaatctgctcaaaat 18810673  T
Q  80 -tggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 178  Q
     || ||||||| ||||||||||||| ||||| | || ||  | |||| |||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  18810672 ctgtaacaaatctgcacccaaaaatgtgttt-tatttttatccgccagcgcaccatcgtgccacgatgtgaccccatcgtgccgcaatttttccagtgcc 18810574  T
Q  179 ttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||| ||||| | ||||||||||||||||||||||||  ||| ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  18810573 ttgcctaaaaaaataaaacctccatcgtgccacgttgcccagccgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 18810483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 122 - 269
Target Start/End: Complemental strand, 43079494 - 43079347
Alignment:
Q  122 gccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgc 221  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  43079494 gccagcgcaccatcgtgccacgatgagaccccatcgtaccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgccttgc 43079395  T
Q  222 catcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    | ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  43079394 cgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 43079347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 28251838 - 28252002
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||| ||| |||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||| | ||    
T  28251838 cccttgtttcaacccactctatctcaaagtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactc-aa 28251936  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgat 166  Q
    |||| |||| |||| || ||||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  28251937 aatacgtttctgtttttcgctgccaacgcaccatcgtaccacgatgcgatcccatcgtgccacgat 28252002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 130 - 269
Target Start/End: Complemental strand, 43081861 - 43081722
Alignment:
Q  130 accatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgc 229  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||| |||||||||| ||||||    
T  43081861 accatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccactttgccttgccgtcgtgc 43081762  T
Q  230 cacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||| |||| ||| ||||||| ||||||| |||||||    
T  43081761 cacgattctgcagaaacctgattttaagttaactctcaca 43081722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 3886189 - 3886336
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcaccc--- 97  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| |||||||||||||||||||||| |||||||       
T  3886189 cccttgtttcagccccctctatctcaaagtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcacccaaa 3886288  T
Q  98 aaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgat 145  Q
    |||||||||||| ||||||| ||||||| | ||||||||| |||||||    
T  3886289 aaaaatatgtttctgttattcgctgccagcacaccatcgtaccacgat 3886336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 2468370 - 2468511
Alignment:
Q  2 ccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaa 101  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| |||||  ||||    
T  2468370 ccttgtttcagctccctctatctcaaagtttactttgatacaaggtctatatttatagtaaaagtatcgcttaacatttggaacaaatctgcactaaaaa 2468469  T
Q  102 atatgtttatgttatttgctgccaccgcaccatcgtgccacg 143  Q
    ||| |||| ||||||| ||  ||| |||||||||||||||||    
T  2468470 atacgtttctgttattcgcatccagcgcaccatcgtgccacg 2468511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 28252008 - 28252093
Alignment:
Q  151 cccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||||||||||||||||||||||||||| ||||||| |||  |||||||||| ||||| ||||||||||| |||||||||||||||||    
T  28252008 cccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtaccacgttgcctagccatcgtgccacgatt 28252093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13858755 - 13858868
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgca-cccaa 99  Q
    ||||||||||| ||||||||||||||| |||| || |||||||| |||||||||| |||||||||| || || | || |||||||||| |  || |||||    
T  13858755 cccttgtttcatccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaattggaacaaaatctcagcccaa 13858854  T
Q  100 aaatatgtttatgt 113  Q
    ||||||||||||||    
T  13858855 aaatatgtttatgt 13858868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14419462 - 14419578
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgca-cccaa 99  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| |||||||||| |||||||||| || || | || |||||||||| |  || |||||    
T  14419462 cccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaagtatcactcataaattggaacaaaatctcagcccaa 14419561  T
Q  100 aaatatgtttatgttat 116  Q
    |||||||||| ||||||    
T  14419562 aaatatgtttctgttat 14419578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 3886330 - 3886412
Alignment:
Q  160 ccacgatttttccagtgccttgcctcaaaa-actgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgca 241  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |  |||||| || ||||||| ||||    
T  3886330 ccacgatttttccagtgtcttgcctcaaaaaactgaaacctccatcgtgccacgttgtccagccatcatgtcacgattctgca 3886412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 181601 - 181536
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||||||||  | |||||||| |||||||||| ||||||||||    
T  181601 cccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaagt 181536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 4423952 - 4423868
Alignment:
Q  152 ccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| || |||||||||||||  || || |||||||||||    
T  4423952 ccatcgtgccacgatttttccagtgccttgcct-taaaactgaaacctccaattgtgccacgttgcccagcaattgtgccacgatt 4423868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26775265 - 26775200
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| | |||||||| ||||||||||    
T  26775265 cccttgtttcagccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaagt 26775200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43530192 - 43530123
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||||| ||||||||||||||||||| ||||||||||    
T  43530192 cccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatatttatagtaaaagt 43530123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14477340 - 14477276
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||| ||||||||||||||| ||||||| |||||||| | |||||||| |||||||||    
T  14477340 cccttgtttcaaccccctctatctcaaggtttgctctgatacaaagcctatatttatagtaaaag 14477276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33541659 - 33541723
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  33541659 cccttgtttcagccccctctatctcaatgtttacactgatacaatgtctatatttatagtaaaag 33541723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35872649 - 35872713
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| |||||||||| |||||||||    
T  35872649 cccttgtttcagccccctctatctcaaggtttacactgatacaatgtctatatttatagtaaaag 35872713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1225230 - 1225165
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| | |||||||| ||||||||||    
T  1225230 cccttgtttcagccccctctatctcaaggtttacactgatacaatgcctatatttatagtaaaagt 1225165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27911079 - 27911014
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||| |||| | ||||||||| ||| |||||| | ||||||||    
T  27911079 cccttgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagt 27911014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27957498 - 27957433
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||| |||| | ||||||||| ||| |||||| | ||||||||    
T  27957498 cccttgtttcagccccctctatctcaaggtttacattgatacaatgtcaatatttattgtaaaagt 27957433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41382737 - 41382672
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||| |||||| |||||||||| |||| || |||| |||||||||||||| ||||||||||    
T  41382737 cccttgttttagccccatctatctcaaggtttactctgattcaaggtctatatttatagtaaaagt 41382672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41384808 - 41384744
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||| ||||||||||  ||| ||||||| |||||||||||||| ||||||||||    
T  41384808 cccttgtttcagcccc-tctatctcaatttttactttgattcaaggtctatatttatagtaaaagt 41384744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 5623009 - 5623117
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||| ||||  | ||||||||   |||||||| |||||||||  || || | || |||||||||| ||   ||||||    
T  5623009 cccttgtttcagccccctctatctcaaggtttattctgatacaaaacctatatttatagtaaaagaatcactcataaattggaacaaaattaggcccaaa 5623108  T
Q  101 aatatgttt 109  Q
    |||||||||    
T  5623109 aatatgttt 5623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 17847556 - 17847484
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgttt 109  Q
    ||||||||||||||||||| |||||||||| || || |||||||||||||||| || | |  |||||||||||    
T  17847556 tgatacaaggtctatatttatagtaaaagtatccctcaaaatttggaacaaatctgaagctgaaaatatgttt 17847484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21482386 - 21482322
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||| || |||||||||||||||| || ||||||||  ||||||||| |||||||||    
T  21482386 cccttgtttcagtccactctatctcaaagtttactctgatacaaattctatatttatagtaaaag 21482322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25952585 - 25952521
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| || |||||||| |  ||||||| |||||||||    
T  25952585 cccttgtttcagccccctctatctcaaggtttcctctgatacaaagcttatatttatagtaaaag 25952521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27107168 - 27107232
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| ||||    |||||||| |||||||||| |||||||||    
T  27107168 cccttgtttcagccccctctatctcaaggtttatactgatacaatgtctatatttatagtaaaag 27107232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 31162267 - 31162212
Alignment:
Q  11 agccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||| |||||| |||| || ||||||||||||||||||| ||||||||||    
T  31162267 agccccctctttctcaaggtttactatgatacaaggtctatatttatagtaaaagt 31162212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 22684953 - 22685002
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||| |||||||||||||| ||||||||||||||||||| |||| |||||    
T  22684953 ctctctctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 22685002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32339373 - 32339304
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||    ||||||||||||||||||| ||||||||||    
T  32339373 cccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 32339304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36865602 - 36865538
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgc-tttgatacaaggtctatatttgtagtaaaa 64  Q
    |||||||||||||||||||||||| || |||| | | |||||||| |||||||||| ||||||||    
T  36865602 cccttgtttcagccccctctatcttaaggtttacatctgatacaatgtctatatttatagtaaaa 36865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15185981 - 15186046
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||| | ||| |||||||| |||| || |||||||| || ||||||| ||||||||||    
T  15185981 cccttgtttcagtcacctttatctcaaggtttactctgatacaaagtttatatttatagtaaaagt 15186046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 6376032 - 6375988
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||| |||| || ||||||||||||||||||| ||||||||||    
T  6376032 tctcaatgtttactctgatacaaggtctatatttatagtaaaagt 6375988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15809283 - 15809214
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||| ||||||    |||||||    ||||||||||||||||||| ||||||||||    
T  15809283 cccttgtttcagccccctttatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 15809214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30480774 - 30480838
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||| |||| |||||||||| |||| |  | |||||| |||||||||| |||||||||    
T  30480774 cccttgtttcaaccccttctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 30480838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 9e-87; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 9e-87
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 27306500 - 27306768
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  27306500 cccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaa 27306599  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| ||||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| ||||||||||||||    
T  27306600 aatacgtttctgttattcgctgctagcgcaccatcgtgccacgaagcgaccccatcgtgccacgatttttccaatgacttgcctc-aaaactgaaacctc 27306698  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcacat 270  Q
    | |||||||||||||| |  ||||||||||||||||| |||| ||| || |||| ||||||| ||||||||    
T  27306699 caatcgtgccacgttgtccagccatcgtgccacgattttgca-aaaccttattttaagttaactctcacat 27306768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 35647 - 35412
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||    
T  35647 cccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaa 35548  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| || |||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||  |||||||||    
T  35547 aatacgtttctgctatttgctgccagcgcacgatcgggccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctc 35449  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | ||||||||||||||||| || ||||||||||||||    
T  35448 caatcgtgccacgttgcctagcaatcgtgccacgatt 35412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 44582 - 44347
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||||||||||    
T  44582 cccttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggtacaaatctgcacccaaa 44483  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||| || |||  |||||||||    
T  44482 aatatgtttatgttatttgctgccagcgcaccatcgtgccacgatgcgaccccatcgtgccatgatttttccagtgctttgcgtc-aaacttgaaacctc 44384  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    | |||||||||| |||||  |  ||||||||||||||    
T  44383 caatcgtgccacattgcccagaaatcgtgccacgatt 44347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 3878595 - 3878322
Alignment:
Q  1 cccttgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatt----tgtagtaaaagtttcgcttaaaatttggaacaaatttgca 94  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||    | |||||||||| |||||||||||||||||||||| ||||    
T  3878595 cccttgtttcagccccctctatctctcaaagtttgctctgatacaaggtctatattaatttatagtaaaagtatcgcttaaaatttggaacaaatctgca 3878496  T
Q  95 cccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactga 194  Q
    ||||||| || |||| ||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  |||    
T  3878495 cccaaaa-tacgtttctgttattcgctgccagcgtaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttga 3878398  T
Q  195 aacctcc-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||| ||||||||||||||||  ||||||||||||||||| |||| ||||||||||| ||||||| |||||||    
T  3878397 aacctccaatcgtgccacgttgcccagccatcgtgccacgattctgcagaaatctgattttaagttaactctcaca 3878322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 4 - 232
Target Start/End: Complemental strand, 25542545 - 25542317
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcac-ccaaaaa 102  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||| | ||| | |||||    
T  25542545 ttgtttcagcccc-tctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctacactcaaaaaa 25542447  T
Q  103 tatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc- 201  Q
    ||||||| |||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||     
T  25542446 tatgtttctgtttttcgctgccagcgcaccatcgtgccacgatgcgatcccatcgtgccacgatttttcaagtgccttgcct-taaaactgaaacctcca 25542348  T
Q  202 atcgtgccacgttgccttgccatcgtgccac 232  Q
    ||||||||||||||||  || ||||||||||    
T  25542347 atcgtgccacgttgcccagcaatcgtgccac 25542317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 18567631 - 18567396
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacc-caa 99  Q
    |||||||||||||||| ||||||||||||||| || ||||||||| ||||||||| |||||||||| |||||||||||||||||| ||||||||||  ||    
T  18567631 cccttgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaac-aatttgcaccaaaa 18567533  T
Q  100 aaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacct 199  Q
    ||||| |||| ||||||| | ||||| ||||||||||||||| | || ||||||||||||||||||    ||||||| |||||||| |||||||||||||    
T  18567532 aaatacgtttctgttattcgttgccagcgcaccatcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttgcctc-aaaactgaaacct 18567434  T
Q  200 cc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    || |||||||||| |||||  || ||||||||||||||    
T  18567433 ccaatcgtgccactttgcccagctatcgtgccacgatt 18567396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 31435318 - 31435553
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacc-caa 99  Q
    |||||||||||||||| ||||||||||||||| || ||||||||| ||||||||| |||||||||| |||||||||||||||||| ||||||||||  ||    
T  31435318 cccttgtttcagccccttctatctcaaagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaac-aatttgcaccaaaa 31435416  T
Q  100 aaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacct 199  Q
    ||||| |||| ||||||| | ||||| ||||||||||||||| | || ||||||||||||||||||    ||||||| |||||||| |||||||||||||    
T  31435417 aaatacgtttctgttattcgttgccagcgcaccatcgtgccaagttgtgaccccatcgtgccacgaaaaatccagtgacttgcctc-aaaactgaaacct 31435515  T
Q  200 cc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    || |||||||||| |||||  || ||||||||||||||    
T  31435516 ccaatcgtgccactttgcccagctatcgtgccacgatt 31435553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 1049566 - 1049710
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  1049566 cccttgtttcagccccctctatctcaaagtttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaa 1049665  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgat 145  Q
    |||| |||| ||||||| || |||| |||||| ||||||||||||    
T  1049666 aatacgtttctgttattcgccgccagcgcaccttcgtgccacgat 1049710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 122 - 269
Target Start/End: Original strand, 1047356 - 1047503
Alignment:
Q  122 gccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgc 221  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||  ||    
T  1047356 gccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgcccagc 1047455  T
Q  222 catcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    | ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  1047456 cgtcgtgccacgattctgcagaaacctgattttaagttaactctcaca 1047503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 269
Target Start/End: Original strand, 40837013 - 40837261
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcac-ccaa 99  Q
    ||||| ||||||||||||| ||||| || |||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| | ||    
T  40837013 cccttctttcagccccctcaatctccaaatttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactcaaa 40837112  T
Q  100 aaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacct 199  Q
    |||||||||| | || || ||||||| | ||||||||||||||                     ||||||||||||||||||||| ||||||||||||||    
T  40837113 aaatatgtttctatttttcgctgccagcacaccatcgtgccac---------------------gatttttccagtgccttgcctaaaaaactgaaacct 40837191  T
Q  200 ccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||||||||||||| |   |||||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  40837192 ccatcgtgccacgttgtccgaccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 40837261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 22392491 - 22392319
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||| |||||||||||||| |||||  |||    
T  22392491 cccttgtttcagccccctctatctcaaagtttactctgatacaaggtctatatttatagtaaaagtatcgcttacaatttggaacaaatctgcactgaaa 22392392  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttcca 173  Q
    ||||  ||| |||| |||||  ||| ||||||||||| ||||| ||||| ||||||||| |||||||| ||||    
T  22392391 aatacatttctgttttttgcctccagcgcaccatcgtaccacgttgcgatcccatcgtggcacgatttctcca 22392319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 83 - 269
Target Start/End: Original strand, 9027502 - 9027687
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9027502 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 9027600  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||||||||||||| ||  |||  ||| ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  9027601 ccaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 9027687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 26804587 - 26804345
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    |||||||||||||||||||||||||||||||| ||     ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||| ||    
T  26804587 cccttgtttcagccccctctatctcaaagtttactc----acaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcaccc-aa 26804493  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctc 200  Q
    |||| |||| ||||||||||||||| ||||||||||||||||                     |||||||||| ||||||||||| ||||||||||||||    
T  26804492 aatacgtttctgttatttgctgccagcgcaccatcgtgccac---------------------gatttttccactgccttgcctc-aaaactgaaacctc 26804415  T
Q  201 c-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    | ||||| ||||||||||  ||||||||||||||||| || | ||| ||||||| ||||||| |||||||    
T  26804414 caatcgtaccacgttgcccagccatcgtgccacgattctgtagaaacctgattttaagttaactctcaca 26804345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 122 - 269
Target Start/End: Complemental strand, 2935217 - 2935070
Alignment:
Q  122 gccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgc 221  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||| ||  |||  ||    
T  2935217 gccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccgcgaagcccagc 2935118  T
Q  222 catcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    | ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  2935117 cgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 2935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 22137063 - 22136878
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22137063 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 22136965  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||||||||||||| ||  |||  ||  ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  22136964 ccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 22136878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 40552090 - 40551905
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40552090 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 40551992  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||||||||||||| ||  |||  ||  ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  40551991 ccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 40551905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 22108052 - 22107867
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22108052 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 22107954  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||| ||||||||| ||  |||  ||  ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  22107953 ccaaaaaactaaaacctgcatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 22107867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 40549812 - 40549627
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40549812 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 40549714  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||| ||||||||| ||  |||  ||  ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  40549713 ccaaaaaactaaaacctgcatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 40549627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31156182 - 31156271
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgctta-aaatttggaacaaat 89  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| | ||| | |||||||||||||||    
T  31156182 cccttgtttcagccccctctatctcaaagtttgccttgatacaagctctatatttatagtaaaagtatagctcataaatttggaacaaat 31156271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7188561 - 7188445
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgctta-aaatttggaacaaatttgcacccaa 99  Q
    ||||||||||||||||||||||||||| |||| || |||||||| |||||||||| |||||||||| || || | ||| ||||||||||| |   |||||    
T  7188561 cccttgtttcagccccctctatctcaaggtttactctgatacaaagtctatatttatagtaaaagtatccctcataaaattggaacaaatctcagcccaa 7188462  T
Q  100 aaatatgtttatgttat 116  Q
    ||||| |||||||||||    
T  7188461 aaatacgtttatgttat 7188445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 22251815 - 22251893
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttg 81  Q
    |||||||||||| ||||||||||||||||| || |||| |||||| ||||||| |||||||||| ||||||||||||||    
T  22251815 cttgtttcagcctcctctatctcaaagtttactctgattcaaggtttatatttatagtaaaagtgtcgcttaaaatttg 22251893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 1049699 - 1049780
Alignment:
Q  155 tcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctcc-atcgtgccacgttgccttgccatcgtgccacgatt 236  Q
    ||||||||||||||||||||| |||||| || ||||||||||||||| ||||||||||||||||  || ||||||||||||||    
T  1049699 tcgtgccacgatttttccagtaccttgcttc-aaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacgatt 1049780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 1606472 - 1606423
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1606472 ctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 1606423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13099747 - 13099812
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||    
T  13099747 cccttgtttcaaccccctctatctcaaggtttactttgattcaaggtctatatttatagtaaaagt 13099812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42331270 - 42331335
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||||||||||  | |||||||| |||||||||| ||||||||||    
T  42331270 cccttgtttcagccccctctatctcaaagtttagtctgatacaaagtctatatttatagtaaaagt 42331335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21678084 - 21678020
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| | |||||||||  ||||||||| |||||||||    
T  21678084 cccttgtttcagccccctctatctcaaggtttacattgatacaatatctatatttatagtaaaag 21678020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 22108158 - 22108114
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  22108158 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 22108114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 22137169 - 22137125
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  22137169 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 22137125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 40549918 - 40549874
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  40549918 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 40549874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 40552196 - 40552152
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  40552196 tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 40552152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 182
Target Start/End: Complemental strand, 42006545 - 42006404
Alignment:
Q  39 atacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtg 138  Q
    ||||| ||| ||||||| ||||||||||  | |||||||| |||||||||| | |||  |||| || ||||||||||||| || | || | |||||||||    
T  42006545 atacacggtttatatttatagtaaaagtaacccttaaaatatggaacaaatcttcactgaaaa-tacgtttatgttatttccttcaac-gtaccatcgtg 42006448  T
Q  139 ccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||| | |||  ||||||||||||||||||| ||||| |||||    
T  42006447 ccacgttacgattccatcgtgccacgattttttcagtgacttgc 42006404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7092446 - 7092512
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaa 63  Q
    ||||||||||||||||||| |||||    |||||||||| ||||||||||||||||||| |||||||    
T  7092446 cccttgtttcagccccctccatctctctcaaagtttgctctgatacaaggtctatatttatagtaaa 7092512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7094693 - 7094751
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatattt 55  Q
    |||||||||||||||||||||||||    |||||||||| |||||||||||||||||||    
T  7094693 cccttgtttcagccccctctatctctctcaaagtttgctctgatacaaggtctatattt 7094751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 25276156 - 25276095
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||| ||||||||||||||||||||||||| |||||||| |  ||||||| |||||||||    
T  25276156 ttgttttagccccctctatctcaaagtttgctctgatacaaagcatatatttatagtaaaag 25276095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 9027396 - 9027440
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||    
T  9027396 tctccaagtttgctttgatacaaggtctatatttatagtaaaagt 9027440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11355276 - 11355212
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  |||||||| | |||||||| |||||||||    
T  11355276 cccttgtttcagccccctctatctcaaggtttacactgatacaaagcctatatttatagtaaaag 11355212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20137380 - 20137444
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| || |||||||| | | |||||| |||||||||    
T  20137380 cccttgtttcagccccctctatctcaaggtttactctgatacaaagccaatatttatagtaaaag 20137444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21680045 - 21679981
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  | |||||| |||||||||| |||||||||    
T  21680045 cccttgtttcagccccctctatctcaaggtttacactaatacaatgtctatatttatagtaaaag 21679981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 2935349 - 2935306
Alignment:
Q  23 ctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||| |||||||||||||||||||||||||||| ||||||||||    
T  2935349 ctcagagtttgctttgatacaaggtctatatttatagtaaaagt 2935306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 20091818 - 20091877
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||| |||| || ||||| || |||||||||| ||||||||||    
T  20091818 tttcagccccctctatctcaaggtttactctgataaaaagtctatatttatagtaaaagt 20091877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 22828906 - 22828969
Alignment:
Q  3 cttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||| |||| ||  ||||||| | |||||||| ||||||||||    
T  22828906 cttgtttcagccccctctatctcaaggtttactcggatacaaagcctatatttatagtaaaagt 22828969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37412399 - 37412462
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    |||||||||||||||||| |||||| | |||| || |||| |||||||||||||| ||||||||    
T  37412399 cccttgtttcagccccctatatctccaggtttactctgattcaaggtctatatttatagtaaaa 37412462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 45366526 - 45366451
Alignment:
Q  39 atacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttatgtt 114  Q
    ||||||||| ||||||| ||||||||||  | ||||||||||||||||||| |||||  ||||||| |||| ||||    
T  45366526 atacaaggtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcactgaaaaatacgtttctgtt 45366451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 1849967 - 1849918
Alignment:
Q  17 ctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||| |||||||||||||| ||| ||||||||||||||| ||||||||||    
T  1849967 ctctctctcaaagtttgctatgaaacaaggtctatatttatagtaaaagt 1849918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4296206 - 4296271
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatac-aaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  |||||| || |||||||||| |||||||||    
T  4296206 cccttgtttcagccccctctatctcaaggtttacactgatacaaatgtctatatttatagtaaaag 4296271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7470293 - 7470359
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaa 63  Q
    |||||||||||||||||||||||||    |||||||  | ||||||||||||||||||| |||||||    
T  7470293 cccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 7470359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7472251 - 7472317
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaa 63  Q
    |||||||||||||||||||||||||    |||||||  | ||||||||||||||||||| |||||||    
T  7472251 cccttgtttcagccccctctatctctctcaaagtttagtctgatacaaggtctatatttatagtaaa 7472317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3035739 - 3035670
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||    ||||||||||||||||||| ||||||||||    
T  3035739 cccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 3035670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 11757246 - 11757177
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||    ||||||||||||||||||| ||||||||||    
T  11757246 cccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 11757177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20299476 - 20299407
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||    ||||||||||||||||||| ||||||||||    
T  20299476 cccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 20299407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24465567 - 24465503
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgc-tttgatacaaggtctatatttgtagtaaaa 64  Q
    ||||||||||||||||||||||||||| |||| | | |||||||| |||||||| | ||||||||    
T  24465567 cccttgtttcagccccctctatctcaaggtttacatctgatacaaagtctatatctatagtaaaa 24465503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24748612 - 24748548
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||||||||||  ||||||||| |  |||||||| |||||||||| || ||||||    
T  24748612 cccttgtttcagccccctctaagtcaaagtttacactgatacaatgtctatatttataataaaag 24748548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38394004 - 38393935
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||    ||||||||||||||||||| ||||||||||    
T  38394004 cccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtaaaagt 38393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 39146258 - 39146322
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||| ||||||| |||| |  |||||||  |||||||||| |||||||||    
T  39146258 cccttgtttcagccccctccatctcaaggtttacactgatacagtgtctatatttatagtaaaag 39146322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 44724597 - 44724533
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    |||||||||||||||||| |||||| | |||| |  |||||||| |||||||||| |||||||||    
T  44724597 cccttgtttcagccccctatatctccaggtttacactgatacaatgtctatatttatagtaaaag 44724533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3677297 - 3677235
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    |||||||||||||||| |||||||| |||||| || |||| |||| ||||||||| ||||||||    
T  3677297 cccttgtttcagcccc-tctatctccaagtttactctgattcaagatctatatttatagtaaaa 3677235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 21990168 - 21990106
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    |||||||||||||||| |||||||| | |||| || |||| |||||||||||||| ||||||||    
T  21990168 cccttgtttcagcccc-tctatctccaggtttactctgattcaaggtctatatttatagtaaaa 21990106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24258481 - 24258438
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaa 44  Q
    ||||||||||||||||||||||||||| |||| || ||||||||    
T  24258481 cccttgtttcagccccctctatctcaatgtttactctgatacaa 24258438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 30906327 - 30906386
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||  ||| || | ||||||||||||||||| ||| ||||||    
T  30906327 tttcagccccctctatctcaagatttactcttatacaaggtctatatttatagcaaaagt 30906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 443610 - 443548
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||| ||| ||||||||||||| |||| || |||| ||| |||||||||| ||||||||||    
T  443610 ttgttttagctccctctatctcaaggtttactctgattcaaagtctatatttatagtaaaagt 443548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 40946216 - 40946167
Alignment:
Q  127 cgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtg 176  Q
    |||||||||||| |||||| ||| || |||||| ||||||||||||||||    
T  40946216 cgcaccatcgtggcacgattcgatccaatcgtgacacgatttttccagtg 40946167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20297380 - 20297311
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||    |||||||||||| |||||| ||||||||||    
T  20297380 cccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtccatatttttagtaaaagt 20297311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 32
Target Start/End: Original strand, 21592417 - 21592445
Alignment:
Q  4 ttgtttcagccccctctatctcaaagttt 32  Q
    |||||||||||||||||||||||||||||    
T  21592417 ttgtttcagccccctctatctcaaagttt 21592445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40946346 - 40946277
Alignment:
Q  1 cccttgtttcagccccctct----atctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||     |||||||||||||| ||| ||||||| ||||||| |||| |||||    
T  40946346 cccttgtttcagccccctctgtccctctcaaagtttgctatgaaacaaggtttatatttatagtgaaagt 40946277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 48457671 - 48457602
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||    |||||||    ||||||||||||||||||| |||| |||||    
T  48457671 cccttgtttcagccccctctatctctctcaaagtttagcctgatacaaggtctatatttatagtgaaagt 48457602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 139; Significance: 2e-72; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 4 - 268
Target Start/End: Complemental strand, 15033 - 14768
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaat 103  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||    
T  15033 ttgtttcagccccctctatctcaaagtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaat 14934  T
Q  104 atgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacct-cca 202  Q
    |||||| ||||||| ||||||| |||||||||||| |||| || || |||||||||||||||  ||||||||| |||||||| | ||||||||| | |||    
T  14933 atgtttctgttattcgctgccagcgcaccatcgtgtcacgttgtgatcccatcgtgccacgaaatttccagtgacttgcctc-ataactgaaacttccca 14835  T
Q  203 tcgtgccacgttgccttgccatcgtgccacgatt-atgcataaatctgatttgaagttaaatctcac 268  Q
    |||| |||||||||| | | ||||||||||||||  |||| ||  ||||||| ||||||| ||||||    
T  14834 tcgttccacgttgcccttcaatcgtgccacgattcctgcagaatcctgattttaagttaactctcac 14768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 137; Significance: 3e-71; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 69562 - 69825
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacc 96  Q
    |||||||||||||||||||||||||    |||||||||| ||||| ||||||||||||| | |||||||| |||||||||||||||||||||| ||||||    
T  69562 cccttgtttcagccccctctatctctctcaaagtttgctctgatataaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaatctgcacc 69661  T
Q  97 caaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaa 196  Q
    | ||||||||||| |||| || ||||||| | ||||||||||| ||||||||| ||||| |||| |||||||||||||||| ||||||| |||  |||||    
T  69662 c-aaaatatgtttctgtttttcgctgccagcacaccatcgtgcaacgatgcgatcccattgtgctacgatttttccagtgctttgcctc-aaacttgaaa 69759  T
Q  197 cctcc-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaa 261  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||||| |||||||    
T  69760 cctccaatcgtgccacgttgcctagccatcgtgccacgattctgcagaaatctgattttaagttaa 69825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 73294 - 73536
Alignment:
Q  1 cccttgtttcagccccctctatctc----aaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacc 96  Q
    |||||||||||||||||||||||||    ||||||| |||||||||| ||||||||||| |||||||||| || ||||||||||||||||||| ||||||    
T  73294 cccttgtttcagccccctctatctctctcaaagtttcctttgatacacggtctatatttatagtaaaagtatctcttaaaatttggaacaaatctgcacc 73393  T
Q  97 caaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaa 196  Q
    | ||||||||||| |||| || ||||||| | |||||||||||                     ||| ||||||||||||| ||||||| |||  |||||    
T  73394 c-aaaatatgtttctgtttttcgctgccagcacaccatcgtgc---------------------cacaatttttccagtgctttgcctc-aaacttgaaa 73470  T
Q  197 cctcc-atcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaa 261  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||    
T  73471 cctccaatcgtgccacgttgcctagccatcgtgccacgattctgcataaatctgattttaagttaa 73536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 106; Significance: 9e-53; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 37 - 178
Target Start/End: Complemental strand, 29142 - 29001
Alignment:
Q  37 tgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcg 136  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| ||||||| ||||| ||||||||||||| |||| || ||||||| ||||||||||    
T  29142 tgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcg 29043  T
Q  137 tgccacgatgcgaccccatcgtgccacgatttttccagtgcc 178  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29042 tgccacgatgcgaccccatcgtgccacgatttttccagtgcc 29001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 29005 - 28941
Alignment:
Q  205 gtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||||||||||  ||||||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  29005 gtgccacgttgcccagccatcgtgccacgattctgcagaaacctgattttaagttaactctcaca 28941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 122 - 269
Target Start/End: Original strand, 12907 - 13054
Alignment:
Q  122 gccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaacctccatcgtgccacgttgccttgc 221  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||     
T  12907 gccagcgcaccatcgtgccacgatgagaccccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacctccatcgtgccacgttgccttga 13006  T
Q  222 catcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    ||||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  13007 catcgtgccacgattctgcagaaacctgattttaagttaactctcaca 13054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 6216 - 5927
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaa----------------------t 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||                      |    
T  6216 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaaactgtaacaaatctgctttaaat 6117  T
Q  79 ttggaacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgcc 178  Q
    ||| ||||||| ||||||||||||||||||| | || ||  | |||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  6116 ttgtaacaaatctgcacccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccatgatgagaccccatcatgccacgatttttccagtgcc 6018  T
Q  179 ttgcctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |||||| ||||||| |||||||||||||||| ||  |||  ||| ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  6017 ttgcctaaaaaactaaaacctccatcgtgccgcgaagcccagccgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 5927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 4014 - 3872
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgcttaaaatttggaacaaatttgcacccaaa 100  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||||| | |||||||||||| ||||||| ||||||||||    
T  4014 cccttgtttcagccccctctatctcaaagtttagtctgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgcacccaaa 3915  T
Q  101 aatatgtttatgttatttgctgccaccgcaccatcgtgccacg 143  Q
    |||| |||||||||||| ||||||| |||||||||||||||||    
T  3914 aatacgtttatgttattcgctgccatcgcaccatcgtgccacg 3872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 87; Significance: 2e-41; HSPs: 4)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 22100 - 21915
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22100 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 22002  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||||||||||||| ||  |||  ||  ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  22001 ccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 21915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 83 - 269
Target Start/End: Complemental strand, 24375 - 24190
Alignment:
Q  83 aacaaatttgcacccaaaaatatgtttatgttatttgctgccaccgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 182  Q
    ||||||| ||| ||||||||||||||| | || ||  | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24375 aacaaatctgctcccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgc 24277  T
Q  183 ctcaaaaactgaaacctccatcgtgccacgttgccttgccatcgtgccacgattatgcataaatctgatttgaagttaaatctcaca 269  Q
    |  ||||||| |||||||||||||||| ||  |||  ||  ||||||||||||| |||| ||| ||||||| ||||||| |||||||    
T  24276 ccaaaaaactaaaacctccatcgtgccgcgaagcccagctgtcgtgccacgattgtgcagaaacctgattttaagttaactctcaca 24190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 22206 - 22162
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||    
T  22206 tctccaagtttgctttgatacaaggtctatatttatagtaaaagt 22162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 24481 - 24437
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||    
T  24481 tctccaagtttgctttgatacaaggtctatatttatagtaaaagt 24437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 1102 - 1167
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  1102 cccttgtttcagccccttctatctcaaagtttgctctgatacaaggtctatatttatagtgaaagt 1167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41754 - 41819
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| |||||    
T  41754 cccttgtttcagccccctctatctctaagtttgctctgatacaaggtctatatttatagtgaaagt 41819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16089 - 16205
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagtttcgctta-aaatttggaacaaatttgcacccaa 99  Q
    ||||| ||||| |||||||||||| || |||| || ||||||||  ||||||||| |||||||||| || || | ||||||||||||||| |   |||||    
T  16089 cccttatttcaaccccctctatcttaaggtttactctgatacaaaatctatatttatagtaaaagtatccctcataaatttggaacaaatctcagcccaa 16188  T
Q  100 aaatatgtttatgttat 116  Q
    ||||||| |||||||||    
T  16189 aaatatgattatgttat 16205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 52028 - 51961
Alignment:
Q  1 cccttgtttcagccccctctatctc--aaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||||||||||||||  |||||||  | ||||||||||||||||||| ||||||||||    
T  52028 cccttgtttcagccccctctatctctcaaagtttagtatgatacaaggtctatatttatagtaaaagt 51961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 183914 - 183975
Alignment:
Q  4 ttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||  ||||||||||||||| || ||||||||||||||||||| |||| |||||    
T  183914 ttgtttcagccct-tctatctcaaagtttactctgatacaaggtctatatttatagtgaaagt 183975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 11748 - 11809
Alignment:
Q  5 tgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    ||||||||||||||||||||| | |||| || |||| |||||||||||||| ||||||||||    
T  11748 tgtttcagccccctctatctccaggtttactctgattcaaggtctatatttatagtaaaagt 11809  T

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Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 79202 - 79140
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaa 63  Q
    ||||||||| |||||||||||||||||  ||| || |||| |||||||||||||| |||||||    
T  79202 cccttgttttagccccctctatctcaagttttactctgattcaaggtctatatttatagtaaa 79140  T

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Target: scaffold0133 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 4825 - 4777
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctttgatacaaggtctatattt 55  Q
    |||||| |||||||||||||| |||| || |||||||||||||||||||    
T  4825 tttcagacccctctatctcaaggtttactctgatacaaggtctatattt 4777  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 79876 - 79812
Alignment:
Q  1 cccttgtttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaag 65  Q
    ||||||||||||||||||||||||||| |||| |  ||||||||   |||||||| |||||||||    
T  79876 cccttgtttcagccccctctatctcaaggtttacactgatacaaaaactatatttatagtaaaag 79812  T

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Target: scaffold0057 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 16924 - 16981
Alignment:
Q  7 tttcagccccctctatctcaaagtttgctttgatacaaggtctatatttgtagtaaaa 64  Q
    |||||||| |||||||||||| |||| || ||||||||||| ||||||| || |||||    
T  16924 tttcagcctcctctatctcaaggtttactctgatacaaggtttatatttatattaaaa 16981  T

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Target: scaffold0511 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 2032 - 1988
Alignment:
Q  22 tctcaaagtttgctttgatacaaggtctatatttgtagtaaaagt 66  Q
    |||||||||||||| ||| ||||||||||||||| |||| |||||    
T  2032 tctcaaagtttgctatgaaacaaggtctatatttatagtgaaagt 1988  T

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