View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3802_low_4 (Length: 316)
Name: NF3802_low_4
Description: NF3802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3802_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 18 - 308
Target Start/End: Complemental strand, 42063042 - 42062752
Alignment:
| Q |
18 |
ttggcaataatgagtttgtgtaatggatcacataactagtactgattctccatatctcagtgatagttgacactggagagggatctttgcagcaataaga |
117 |
Q |
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| T |
42063042 |
ttggcaataatgagtttgtgtaatggatcacataactagtactgattctccatatctcagtgatagttgacactggagagggatctttgtagcaataaga |
42062943 |
T |
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| Q |
118 |
ggataaagtgaagaaagagtgcaatgcgaagttcttttggttcaaagtctaaaatttcccttgataggtttcccattaatgtgaagtaactcaccctccc |
217 |
Q |
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|||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
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| T |
42062942 |
ggataaagtgaagaaagagtgcaaggcaaagttcttttggttcaaagtctaaaatttcccttgataggtttcccattattgtgaagcaactcaccctccc |
42062843 |
T |
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| Q |
218 |
cctcatccttcgtattcatttcagttgggatgcttccagcggaaggctgagttacgttcattacttagctgatcagattggtatgatgatg |
308 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42062842 |
cctcatctttcgtattcatttcagttgggatgcttccagcggaaggctgagttacgttcattacttagctgatcagattggtatgatgatg |
42062752 |
T |
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