View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3804_high_67 (Length: 221)
Name: NF3804_high_67
Description: NF3804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3804_high_67 |
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Alignment Details
Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 21 - 210
Target Start/End: Complemental strand, 40223030 - 40222841
Alignment:
| Q |
21 |
gatcatatagatatgatttttattccaagtttaatagtgcaagtttatgacctatataagagcattaagatgttgaaaggttgtttggcatatgccnnnn |
120 |
Q |
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| T |
40223030 |
gatcatatagatatgatttttattccgagtttaatagtgcaagtttatgacctaaataagagcattaagatgttgaaaggttgtttggcatatgccaaaa |
40222931 |
T |
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| Q |
121 |
nnnttataatttttgtgtacacataaacatgttttaaccggtataatattattatgtaataagaataagatcataaaatatgatttgatg |
210 |
Q |
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|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40222930 |
aaattatgatttttgtgtacacataaacatgttttaatcggtataatattattatgtaataagaataagatcataaaatatgatttgatg |
40222841 |
T |
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