View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3804_high_8 (Length: 541)

Name: NF3804_high_8
Description: NF3804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3804_high_8
NF3804_high_8
[»] chr2 (35 HSPs)
chr2 (290-533)||(37720489-37720733)
chr2 (1-134)||(26692698-26692834)
chr2 (1-137)||(8851188-8851327)
chr2 (1-137)||(17851279-17851416)
chr2 (1-137)||(19141724-19141863)
chr2 (1-134)||(26692436-26692572)
chr2 (1-134)||(41790530-41790666)
chr2 (1-135)||(16910867-16911006)
chr2 (1-135)||(7979605-7979743)
chr2 (1-137)||(18750015-18750140)
chr2 (1-137)||(8851466-8851596)
chr2 (1-137)||(41790787-41790926)
chr2 (1-137)||(7664556-7664687)
chr2 (3-134)||(18749767-18749903)
chr2 (1-137)||(6325222-6325361)
chr2 (4-137)||(19141486-19141614)
chr2 (1-137)||(7664288-7664418)
chr2 (1-137)||(16911151-16911283)
chr2 (1-135)||(17851018-17851147)
chr2 (1-137)||(6324957-6325089)
chr2 (1-135)||(7979889-7980017)
chr2 (1-63)||(37720244-37720307)
chr2 (1-89)||(5793487-5793578)
chr2 (1-103)||(5379868-5379973)
chr2 (178-226)||(37720374-37720422)
chr2 (1-135)||(38490717-38490855)
chr2 (1-39)||(2638860-2638898)
chr2 (1-103)||(5378701-5378806)
chr2 (100-135)||(37720446-37720481)
chr2 (1-39)||(2639458-2639496)
chr2 (1-39)||(7591241-7591279)
chr2 (1-39)||(7591826-7591864)
chr2 (1-39)||(18296116-18296154)
chr2 (1-39)||(26841627-26841665)
chr2 (1-39)||(26842214-26842252)
[»] chr7 (33 HSPs)
chr7 (1-137)||(48359359-48359497)
chr7 (1-134)||(17157007-17157143)
chr7 (1-134)||(18864007-18864143)
chr7 (1-137)||(37888873-37889014)
chr7 (1-134)||(3204971-3205107)
chr7 (1-137)||(20419198-20419338)
chr7 (1-137)||(37889133-37889273)
chr7 (1-137)||(3204707-3204846)
chr7 (1-137)||(10533074-10533213)
chr7 (1-137)||(37972271-37972410)
chr7 (1-128)||(13744117-13744247)
chr7 (1-136)||(29292962-29293100)
chr7 (1-134)||(29293224-29293360)
chr7 (1-134)||(22740470-22740605)
chr7 (12-134)||(9034919-9035044)
chr7 (1-135)||(13741597-13741733)
chr7 (1-137)||(9035166-9035307)
chr7 (1-137)||(42418631-42418771)
chr7 (1-137)||(38826786-38826927)
chr7 (1-137)||(36527423-36527562)
chr7 (1-135)||(22740196-22740326)
chr7 (1-137)||(18864285-18864416)
chr7 (1-137)||(20418928-20419060)
chr7 (1-137)||(37972000-37972131)
chr7 (12-137)||(42418910-42419031)
chr7 (1-137)||(36527683-36527812)
chr7 (1-78)||(48359592-48359672)
chr7 (179-222)||(36527597-36527640)
chr7 (1-38)||(46816288-46816325)
chr7 (1-39)||(13863353-13863391)
chr7 (1-39)||(44599529-44599567)
chr7 (1-39)||(44600111-44600149)
chr7 (6-39)||(13863933-13863966)
[»] chr1 (56 HSPs)
chr1 (1-137)||(48104718-48104857)
chr1 (1-137)||(50615496-50615635)
chr1 (1-137)||(50623324-50623463)
chr1 (1-134)||(49318044-49318180)
chr1 (1-137)||(49318320-49318457)
chr1 (1-134)||(50526350-50526486)
chr1 (2-137)||(4692062-4692199)
chr1 (4-137)||(4692308-4692444)
chr1 (1-137)||(9347166-9347306)
chr1 (1-137)||(50429955-50430095)
chr1 (1-137)||(999398-999539)
chr1 (1-137)||(42611225-42611366)
chr1 (4-137)||(9347425-9347562)
chr1 (4-137)||(21687068-21687205)
chr1 (1-137)||(28634031-28634171)
chr1 (4-137)||(46824153-46824289)
chr1 (1-134)||(27172155-27172288)
chr1 (1-137)||(999151-999289)
chr1 (4-134)||(6703772-6703905)
chr1 (1-137)||(44911065-44911204)
chr1 (2-137)||(28633761-28633892)
chr1 (1-137)||(42611488-42611628)
chr1 (1-134)||(44911315-44911451)
chr1 (4-137)||(20371081-20371214)
chr1 (1-137)||(50949440-50949579)
chr1 (3-134)||(44223997-44224131)
chr1 (1-137)||(50429696-50429836)
chr1 (1-130)||(21687348-21687481)
chr1 (1-137)||(32162925-32163057)
chr1 (4-137)||(49317794-49317930)
chr1 (1-130)||(13918486-13918618)
chr1 (1-137)||(27172424-27172555)
chr1 (1-137)||(26814734-26814865)
chr1 (1-137)||(46823883-46824014)
chr1 (1-137)||(48104998-48105130)
chr1 (50-137)||(50615289-50615376)
chr1 (50-137)||(50623117-50623204)
chr1 (1-98)||(20480207-20480307)
chr1 (1-137)||(6703500-6703630)
chr1 (1-137)||(26815003-26815133)
chr1 (58-137)||(50949241-50949320)
chr1 (1-137)||(13918748-13918881)
chr1 (1-92)||(20371272-20371367)
chr1 (1-135)||(20480499-20480626)
chr1 (4-92)||(47498342-47498433)
chr1 (178-222)||(9347347-9347391)
chr1 (4-102)||(32162772-32162867)
chr1 (22-134)||(44223745-44223851)
chr1 (1-104)||(19008658-19008764)
chr1 (6-68)||(6712215-6712281)
chr1 (178-218)||(42611407-42611447)
chr1 (178-222)||(50615417-50615461)
chr1 (178-222)||(50623245-50623289)
chr1 (1-39)||(6002870-6002908)
chr1 (1-39)||(49284449-49284487)
chr1 (3-39)||(6002279-6002315)
[»] chr6 (18 HSPs)
chr6 (1-137)||(7654423-7654562)
chr6 (1-137)||(22754965-22755103)
chr6 (1-137)||(33974173-33974313)
chr6 (1-137)||(10087734-10087872)
chr6 (1-137)||(29074247-29074386)
chr6 (1-137)||(29079011-29079150)
chr6 (1-137)||(29106820-29106959)
chr6 (2-137)||(2354449-2354587)
chr6 (1-132)||(2354691-2354824)
chr6 (1-134)||(32733874-32734010)
chr6 (2-137)||(13176660-13176798)
chr6 (2-134)||(32733598-32733725)
chr6 (3-137)||(22684240-22684370)
chr6 (3-137)||(22754698-22754828)
chr6 (3-129)||(13176947-13177068)
chr6 (16-137)||(33973919-33974033)
chr6 (1-39)||(33829030-33829068)
chr6 (1-39)||(33829612-33829650)
[»] chr4 (37 HSPs)
chr4 (3-137)||(25162188-25162325)
chr4 (1-134)||(169317-169453)
chr4 (1-134)||(28196386-28196522)
chr4 (1-137)||(28196647-28196787)
chr4 (1-134)||(9023284-9023420)
chr4 (1-137)||(23539879-23540018)
chr4 (1-134)||(32703265-32703401)
chr4 (1-137)||(32703524-32703664)
chr4 (1-137)||(39744339-39744479)
chr4 (1-137)||(9380347-9380486)
chr4 (1-137)||(23540127-23540266)
chr4 (4-137)||(48406004-48406141)
chr4 (4-137)||(292825-292961)
chr4 (1-134)||(26207400-26207536)
chr4 (1-134)||(48406263-48406399)
chr4 (1-137)||(169054-169194)
chr4 (1-137)||(39086496-39086637)
chr4 (1-134)||(43292237-43292371)
chr4 (1-134)||(39912365-39912501)
chr4 (1-137)||(25161918-25162050)
chr4 (1-137)||(9380624-9380755)
chr4 (1-116)||(26207642-26207760)
chr4 (1-137)||(293099-293231)
chr4 (1-105)||(4239273-4239380)
chr4 (1-137)||(12757806-12757946)
chr4 (1-137)||(9023562-9023694)
chr4 (5-137)||(12758086-12758214)
chr4 (1-135)||(39744070-39744199)
chr4 (14-134)||(39912106-39912220)
chr4 (1-89)||(43292077-43292168)
chr4 (1-87)||(44468849-44468937)
chr4 (178-222)||(39086411-39086455)
chr4 (1-39)||(36095857-36095895)
chr4 (1-39)||(36096451-36096489)
chr4 (1-39)||(50678819-50678857)
chr4 (2-39)||(50679400-50679437)
chr4 (3-39)||(43051228-43051264)
[»] chr8 (27 HSPs)
chr8 (1-134)||(24473646-24473782)
chr8 (1-137)||(37396748-37396891)
chr8 (1-137)||(34498430-34498569)
chr8 (1-137)||(41662561-41662701)
chr8 (3-137)||(24473385-24473522)
chr8 (16-137)||(16169482-16169606)
chr8 (1-137)||(6198970-6199110)
chr8 (1-137)||(34498162-34498291)
chr8 (1-134)||(9623542-9623678)
chr8 (14-134)||(15444264-15444387)
chr8 (1-137)||(37397028-37397159)
chr8 (1-137)||(6198698-6198830)
chr8 (1-137)||(33726986-33727119)
chr8 (30-137)||(33726734-33726844)
chr8 (1-137)||(20861519-20861652)
chr8 (1-135)||(15444531-15444661)
chr8 (1-137)||(25439009-25439140)
chr8 (1-137)||(17431327-17431456)
chr8 (4-137)||(16169216-16169345)
chr8 (1-39)||(13936762-13936800)
chr8 (100-137)||(9623822-9623859)
chr8 (1-64)||(2856566-2856632)
chr8 (1-39)||(9822788-9822826)
chr8 (1-39)||(9823337-9823375)
chr8 (1-39)||(13027257-13027295)
chr8 (72-134)||(15043660-15043722)
chr8 (1-39)||(39724024-39724062)
[»] chr5 (35 HSPs)
chr5 (1-137)||(19514566-19514706)
chr5 (2-134)||(3888540-3888675)
chr5 (2-137)||(3888280-3888418)
chr5 (1-137)||(22729315-22729454)
chr5 (2-137)||(41072089-41072227)
chr5 (1-134)||(12498803-12498942)
chr5 (1-137)||(26571040-26571178)
chr5 (1-127)||(12498607-12498736)
chr5 (1-137)||(34147179-34147319)
chr5 (1-137)||(2817189-2817328)
chr5 (1-137)||(37780628-37780756)
chr5 (1-137)||(43464075-43464206)
chr5 (1-137)||(2817451-2817589)
chr5 (1-137)||(21207266-21207398)
chr5 (1-134)||(26570769-26570897)
chr5 (1-134)||(34147390-34147524)
chr5 (1-134)||(19514848-19514977)
chr5 (1-137)||(10098559-10098684)
chr5 (1-135)||(22729047-22729174)
chr5 (3-137)||(37610243-37610370)
chr5 (1-137)||(37610503-37610632)
chr5 (1-134)||(11316860-11316988)
chr5 (1-137)||(10098824-10098955)
chr5 (25-137)||(25940839-25940955)
chr5 (3-137)||(37780361-37780489)
chr5 (1-137)||(43463795-43463935)
chr5 (4-137)||(30401925-30402056)
chr5 (1-137)||(25940561-25940697)
chr5 (1-66)||(25940959-25941028)
chr5 (178-222)||(41072004-41072048)
chr5 (1-37)||(11351405-11351441)
chr5 (179-222)||(2817372-2817415)
chr5 (4-39)||(11350850-11350885)
chr5 (1-39)||(18816992-18817030)
chr5 (1-39)||(18817587-18817625)
[»] chr3 (33 HSPs)
chr3 (1-137)||(3353425-3353565)
chr3 (1-137)||(22429471-22429610)
chr3 (4-137)||(47666210-47666346)
chr3 (1-137)||(27238505-27238644)
chr3 (1-137)||(3353167-3353304)
chr3 (1-135)||(26007221-26007358)
chr3 (1-137)||(36180594-36180733)
chr3 (1-137)||(40848836-40848975)
chr3 (1-134)||(42673017-42673153)
chr3 (16-137)||(44008022-44008146)
chr3 (1-137)||(48160208-48160347)
chr3 (1-137)||(53687928-53688066)
chr3 (1-137)||(27238783-27238914)
chr3 (1-137)||(53688178-53688317)
chr3 (1-137)||(40848560-40848695)
chr3 (1-137)||(42456076-42456209)
chr3 (1-137)||(24485061-24485192)
chr3 (1-137)||(22429198-22429330)
chr3 (1-135)||(47665951-47666088)
chr3 (4-134)||(10348522-10348656)
chr3 (1-137)||(10348681-10348813)
chr3 (1-137)||(42673178-42673310)
chr3 (51-137)||(53766466-53766552)
chr3 (1-137)||(24485331-24485474)
chr3 (2-137)||(26007502-26007632)
chr3 (1-137)||(48159937-48160070)
chr3 (1-137)||(53766203-53766331)
chr3 (1-137)||(36180872-36181004)
chr3 (48-134)||(42455859-42455945)
chr3 (4-137)||(44008283-44008412)
chr3 (51-135)||(21895722-21895807)
chr3 (1-135)||(21896390-21896525)
chr3 (178-222)||(3353346-3353390)
[»] scaffold0041 (2 HSPs)
scaffold0041 (1-135)||(38291-38428)
scaffold0041 (1-137)||(38570-38709)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-137)||(185149-185288)
scaffold0017 (4-137)||(184882-185011)
[»] scaffold0460 (2 HSPs)
scaffold0460 (1-137)||(370-509)
scaffold0460 (1-135)||(649-777)
[»] scaffold0029 (2 HSPs)
scaffold0029 (12-137)||(9957-10085)
scaffold0029 (31-137)||(10223-10332)
[»] scaffold0069 (2 HSPs)
scaffold0069 (4-137)||(50116-50249)
scaffold0069 (1-92)||(50426-50521)
[»] scaffold0176 (2 HSPs)
scaffold0176 (1-135)||(19920-20057)
scaffold0176 (1-122)||(19660-19778)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-39)||(6771-6809)


Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 290 - 533
Target Start/End: Original strand, 37720489 - 37720733
Alignment:
Q  290 catgaacaaataattgaaataagtaggaatcttgtgcaatttattgctcaagaacactttcatgaattggtaaaaaatcattttcagattttgaattcag 389  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37720489 catgaataaataattgaaataagtaggaatcttgtgcaatttattgctcaagaacactttcatgaattggtaaaaaatcattttcagattttgaattcag 37720588  T
Q  390 ctttagaaatgttgtagttctaaaactattgagaatacaatttaagccttatagaccaaggtgggatcactataaaatttgagccactttaaaattagag 489  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37720589 ctttagaaatgtagtagttctaaaactattgagaatacaatttaagccttatagaccaaggtgggatcactataaaatttgagccactttaaaattagag 37720688  T
Q  490 agaacaatttggtaataatactttatagaa-tttatgtgatgatg 533  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||    
T  37720689 agaacaatttggtaataatactctatagaattttatgtgatgatg 37720733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 26692834 - 26692698
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  26692834 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatgtgtc 26692735  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    ||||||||||||||||||||||| |||||||||||||    
T  26692734 tgttttttatcaattaatgtgtgtcacgtgtgtaatt 26692698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 8851188 - 8851327
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| |||||||||||||||| |||| ||||    
T  8851188 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgttgatatgtc 8851287  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8851288 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 8851327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 17851416 - 17851279
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| || |||||||||||||||||||||| ||||    
T  17851416 gcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatgg-tcccatgacatttagtgctgatatgtc 17851318  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    || |||||||||||||||||||||||||||||||||||||    
T  17851317 tg-tttttatcaattaatgtgtgccacgtgtgtaattcca 17851279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 19141863 - 19141724
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||| |||||||||| ||||||||||||||||||| |||||||  ||||||||||||||||| |||||||||||||||||||||||||||||     
T  19141863 gcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtt 19141764  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | || ||||||||||||| |||||||||||||||||||||    
T  19141763 tattatttatcaattaatatgtgccacgtgtgtaattcca 19141724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 26692436 - 26692572
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc-ccctatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||   |||||||||||||||| ||| |||| |||||||| ||||||||||||    
T  26692436 gcgattttgcaccccatagttttaaacgagcgattttgctccctataatttttcccctttctgattttatggtccccaagacatttattgctgatgtgtc 26692535  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    ||||||||||||||||||||||||||| |||||||||    
T  26692536 tgttttttatcaattaatgtgtgccacatgtgtaatt 26692572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 41790530 - 41790666
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |||||||  || |||||||||||||| ||||| ||||||||||| ||||||||||||    
T  41790530 gcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctgattttatggttctcatgacatttaatgctgatgtgtc 41790629  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||| ||||||||||||||||||||||||||||||||    
T  41790630 tgttatttatcaattaatgtgtgccacgtgtgtaatt 41790666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 16910867 - 16911006
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgccc-ctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  |||| |||||||||||||| ||| |||||||||||||||| |||| ||||    
T  16910867 gcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttcctcctttctgattttatggtccccatgacatttagtgttgatatgtc 16910966  T
Q  98 tg--ttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
    ||  ||||||||||||||||||||||||||||| ||||||    
T  16910967 tgttttttttatcaattaatgtgtgccacgtgtttaattc 16911006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 7979605 - 7979743
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||||||||||| | | || |||||||||||||||||| ||||    
T  7979605 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctctttctgattttatgatccctatgacatttagtgctgatatgtc 7979704  T
Q  98 tg-ttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
    || ||||||||||||||||||||| ||||||||||||||    
T  7979705 tgtttttttatcaattaatgtgtgtcacgtgtgtaattc 7979743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 18750140 - 18750015
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccctatagttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||           ||||||||||||| ||| ||||||||||||||||||||||||| |||    
T  18750140 gcgattttgcaccccatagttttaaacgagcgattttgcccc-----------ctttctgattttatggtccccatgacatttagtgctgatgtgtttgt 18750052  T
Q  101 tttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||| ||||||||||||||||    
T  18750051 tttttatcaattaatgtgtgtcacgtgtgtaattcca 18750015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 8851596 - 8851466
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag-ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||| ||| ||||||||||||||||||||           
T  8851596 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccctttctgattttatggtccccatgacatttagtgctga------- 8851504  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
     ||||||||||||||||||||||||||||||||||||||    
T  8851503 -ttttttatcaattaatgtgtgccacgtgtgtaattcca 8851466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 41790926 - 41790787
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||| |||||| |||| ||||||||||||||||||| |||||||  ||| ||||||||||||| ||||||||||| |||||||| |||||||||    
T  41790926 gcgattttgccccccattgtttaaaacgagcgattttgccccctatagttttccctctttctgattttatggttcccatgatatttagtgttgatgtgtc 41790827  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| |||||||||||||| |||||||| |||||||||||    
T  41790826 tgttatttatcaattaatgcgtgccacgagtgtaattcca 41790787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 7664687 - 7664556
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| |||||||||||||||||             
T  7664687 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgc--------g 7664596  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  7664595 ttttttttatcaattaatgtgtgccacgtgtgtaattcca 7664556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 18749767 - 18749903
Alignment:
Q  3 gattttgcaccccatagttttaaacgagcgattttgcccc-tatagttcc-ccctttctgattttagggttcccatgacatttagtgctgatgtgtctg- 99  Q
    |||||||||||||||||||||||||||  ||||||||||| |||||||   ||||||||||||||| ||  ||||| ||||||||||||||||||||||     
T  18749767 gattttgcaccccatagttttaaacgaatgattttgccccctatagtttttccctttctgattttatgggccccataacatttagtgctgatgtgtctgt 18749866  T
Q  100 --ttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
      |||||||||||||||||||||||||||||||||||    
T  18749867 ttttttttatcaattaatgtgtgccacgtgtgtaatt 18749903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 6325361 - 6325222
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||| |||||| ||||||||||||||||||||| |||||||  |||| ||||||| |||| ||| || | || ||||||||||||| |||     
T  6325361 gcgattttgcacctcatagtattaaacgagcgattttgccccctatagttttccccatttctgactttatggtccctaggatatttagtgctgatatgta 6325262  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  6325261 tgttttttatcaattaatgtgtgtcacgtgtgtaattcca 6325222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 19141486 - 19141614
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgt 100  Q
    |||||||||||||||||||||||||||||| ||| |||| |||||||  |||||||| ||||         |||||||||||||||||||||||||||||    
T  19141486 attttgcaccccatagttttaaacgagcgaatttaccccctatagttttccccctttatgatc--------cccatgacatttagtgctgatgtgtctgt 19141577  T
Q  101 tttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||||||||||||||||||||    
T  19141578 tttttatcaattaatgtgtgccacgtgtgtaattcca 19141614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 7664288 - 7664418
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctata--gttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||| ||| ||||||| |||||||||    ||       
T  7664288 gcgattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctttctgattttatggtccccatgatatttagtgc----gt--- 7664380  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||||||||||||||||||||    
T  7664381 --ttttttatcaattaatgtgtgccacgtgtgtaattcca 7664418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 16911283 - 16911151
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| |||  || ||||||||||||||| |         
T  16911283 gcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttctgattttatggtctccgtgacatttagtgctggt----- 16911189  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||||| | ||||||||||||    
T  16911188 --ttttttatcaattaatgtgtgccgcatgtgtaattcca 16911151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 17851018 - 17851147
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||  |||||||||| |||||||| ||| ||||||| ||||||||||| |         
T  17851018 gcgattttgcaccccatagttttaa-cgagcgattttgccccctatagatttccccctttatgattttatggtccccatgatatttagtgctggt----- 17851111  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
      ||||||||||||||||||||| ||||||||||||||    
T  17851112 --ttttttatcaattaatgtgtgtcacgtgtgtaattc 17851147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 6324957 - 6325089
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||  ||||| ||||||||||||| ||  ||||||||||||||||||| |         
T  6324957 gcgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttccctctttctgattttatggcccccatgacatttagtgctggt----- 6325051  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      |||||||||||||||||| || | ||||||||||||||    
T  6325052 --ttttttatcaattaatgtatgtcgcgtgtgtaattcca 6325089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7980017 - 7979889
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcc-cctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||  || |||||||||||||||| ||| ||||||| ||||||||              
T  7980017 gcgattttgcaccccatagttttaaacgagcgatttcgccgcctatagtttttcccctttctgattttatggtccccatgatatttagtg---------t 7979927  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
    || |||||||||||||||||||||||||||||||||||    
T  7979926 tggtttttatcaattaatgtgtgccacgtgtgtaattc 7979889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37720244 - 37720307
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccctatag-ttccccctttctgatt 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  37720244 gcgattttgcaccccatagttttaaacgagcgattttgcccctatagttttcccctttctgatt 37720307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5793487 - 5793578
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgct 89  Q
    ||||||||||| || ||||||||||||||||||||||| |||||||||  ||||| ||||||||||||| ||| |||||||||||| |||||    
T  5793487 gcgattttgcatcctatagttttaaacgagcgattttgccccctatagttttccctctttctgattttatggtccccatgacattttgtgct 5793578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5379973 - 5379868
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||| |||||| ||||| ||||||||| |||||||| ||  ||||||||||||||| | ||| ||| |||||| | | |||||||||||    
T  5379973 gcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccccctttctgatttgatggtccccctgacatctggcgctgatgtgtc 5379874  T
Q  98 tgtttt 103  Q
    ||||||    
T  5379873 tgtttt 5379868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 37720374 - 37720422
Alignment:
Q  178 ggtagctttgagttttgtgtgccacgtgcctccttctctcaaaatacca 226  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  37720374 ggtagctttgagttttgtgtgttacgtgcctccttctctcaaaatacca 37720422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 38490855 - 38490717
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc---tatagttccccctttctgattttagggttcc-catgacatttagtgctgatgtgt 96  Q
    ||||||||||| | ||| ||||||||||||||||||||| ||   | |  |||||||||| |||||| | ||  || ||| || ||||||| ||||||      
T  38490855 gcgattttgcatctcatggttttaaacgagcgattttgcaccccatctttttccccctttatgatttcaaggcccctcataacttttagtgatgatgtag 38490756  T
Q  97 ctgttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
    |||||||| |||| ||||||| |||||||||||||||||    
T  38490755 ctgtttttgatcatttaatgtttgccacgtgtgtaattc 38490717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2638860 - 2638898
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2638860 gcgattttgcaccccatatttttaaacgagcgattttgc 2638898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 5378701 - 5378806
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||| |||||| ||||| ||||||||| |||||||| ||  ||| ||||||||||| | ||| ||| || ||| | | |||||||||||    
T  5378701 gcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccctctttctgatttgatggtccccctggcatctggcgctgatgtgtc 5378800  T
Q  98 tgtttt 103  Q
    ||||||    
T  5378801 tgtttt 5378806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 135
Target Start/End: Complemental strand, 37720481 - 37720446
Alignment:
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
    |||||||||||||||||||||||| |||||||||||    
T  37720481 ttttttatcaattaatgtgtgccatgtgtgtaattc 37720446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2639496 - 2639458
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  2639496 gcgattttgcaccccatgtttttaaacgagcgattttgc 2639458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7591241 - 7591279
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  7591241 gcgattttgcaccccatgtttttaaacgagcgattttgc 7591279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7591864 - 7591826
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  7591864 gcgattttgcaccccatgtttttaaacgagcgattttgc 7591826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18296116 - 18296154
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  18296116 gcgattttgcaccccatgtttttaaacgagcgattttgc 18296154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26841627 - 26841665
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  26841627 gcgattttgcaccccatgtttttaaacgagcgattttgc 26841665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26842252 - 26842214
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  26842252 gcgattttgcaccccatgtttttaaacgagcgattttgc 26842214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 9e-56; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 48359359 - 48359497
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt-ccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  48359359 gcgattttgcaccccatagttttaaacgagcgattttaccccctatagtttccccctttctgattttatggtccccatgacatttagtgctgatgtgtct 48359458  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48359459 gttttttatcaattaatgtgtgccacgtgtgtaattcca 48359497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 17157007 - 17157143
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  17157007 gcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatgtgtc 17157106  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||||||||||||||||||||||||||||||||||||    
T  17157107 tgttttttatcaattaatgtgtgccacgtgtgtaatt 17157143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 18864007 - 18864143
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  18864007 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtc 18864106  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    ||||||||||||||||||||||| |||||||||||||    
T  18864107 tgttttttatcaattaatgtgtgtcacgtgtgtaatt 18864143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 37888873 - 37889014
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  37888873 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatgtgtc 37888972  T
Q  98 tg--ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||  ||||||||||||||| ||||||||||||||||||||||    
T  37888973 tgttttttttatcaattaacgtgtgccacgtgtgtaattcca 37889014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 3205107 - 3204971
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| |||||||||||||||| |||||| ||    
T  3205107 gcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgttgatgtatc 3205008  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||||||||||||||||||||||||||||||||||||    
T  3205007 tgttttttatcaattaatgtgtgccacgtgtgtaatt 3204971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 20419338 - 20419198
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||| ||||||||||||||||| ||||    
T  20419338 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccgtgacatttagtgctgatatgtc 20419239  T
Q  98 tgtt-ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  20419238 tgtttttttatcaattaatgtgtgccacgtgtgtaattcca 20419198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 37889273 - 37889133
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  | ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  37889273 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctgattttatggtccccatgacatttagtgctgatgtgtc 37889174  T
Q  98 tgtt-ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| ||||||||||||| ||||||||||||||||||||||    
T  37889173 tgtttttttatcaattaacgtgtgccacgtgtgtaattcca 37889133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 3204707 - 3204846
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||  ||| ||||||||||||| ||| ||||||||||||| ||||||||||||    
T  3204707 gcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctctttctgattttatggtccccatgacatttattgctgatgtgtc 3204806  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  3204807 tattttttatcaattaatgtgtgccacgtgtgtaattcca 3204846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 10533074 - 10533213
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||     
T  10533074 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatgtgtt 10533173  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||| ||||||| |||||||||||||| ||||||    
T  10533174 tgttttttattaattaatttgtgccacgtgtgtgattcca 10533213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 37972410 - 37972271
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||| ||||||| ||| ||||||||||||||||||||| ||||    
T  37972410 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttcagattttatggtccccatgacatttagtgctgatatgtc 37972311  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  37972310 tgttttttatcaattaatgtgtgccgcgtgcgtaattcca 37972271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 13744247 - 13744117
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||| |||||||| ||| ||||||| ||||||||||||||||||    
T  13744247 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttttgattttatggtccccatgatatttagtgctgatgtgtc 13744148  T
Q  98 tgttttttatcaattaatgtgtgccacgtgt 128  Q
    |||||||||||||||||||||||||||||||    
T  13744147 tgttttttatcaattaatgtgtgccacgtgt 13744117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 29292962 - 29293100
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||| ||||| |||| ||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29292962 gcgattttgcatcccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtc 29293061  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcc 136  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  29293062 tgttatttatcaattattgtgtgccacgtgtgtaattcc 29293100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 29293360 - 29293224
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||| |||| |||| ||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  29293360 gcgattttgcactccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttactgctgatgtgtc 29293261  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||| ||||||||||||||||||||||||||||||||    
T  29293260 tgttatttatcaattaatgtgtgccacgtgtgtaatt 29293224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 22740605 - 22740470
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc-ccctatagttc-cccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||||| || ||| ||||||||||||||||||||| |||||    
T  22740605 gcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttcccctttatgattctatggtccccatgacatttagtgctgatatgtct 22740506  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||||||||||||||||| |||||||||||||||||    
T  22740505 gttttttatcaattaatgcgtgccacgtgtgtaatt 22740470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 9034919 - 9035044
Alignment:
Q  12 ccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatc 108  Q
    ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||     
T  9034919 ccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttaatgctgatgtgtctgttttttatt 9035018  T
Q  109 aattaatgtgtgccacgtgtgtaatt 134  Q
    ||||||||||||||||||||||||||    
T  9035019 aattaatgtgtgccacgtgtgtaatt 9035044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 13741597 - 13741733
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||| ||||||||||| | ||| ||| ||||||||||||||||| ||||    
T  13741597 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccactttctgattt-atggtccccgtgacatttagtgctgatctgtc 13741695  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13741696 tgttttttatcaattaatgtgtgccacgtgtgtaattc 13741733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 9035307 - 9035166
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatagtt---ccccctttctgattttagggttcccatgacatttagtgctgatgtgt 96  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    |||||||||||||||| ||| |  ||||||||||||| ||||||||    
T  9035307 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcccctttctgattttatggtccagatgacatttagtgatgatgtgt 9035208  T
Q  97 ctg-ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  9035207 ctgtttttttatcaattaatgtgtgccacgtgtgtaattcca 9035166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 42418631 - 42418771
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||| | || ||||||||||||||||||||||||||| |||||||  |||||||||| |||||| ||| ||||||||||||||||||||| ||||    
T  42418631 gcgattttgtatcctatagttttaaacgagcgattttgccccctatagttttccccctttctaattttatggtccccatgacatttagtgctgatatgtc 42418730  T
Q  98 tg-ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  42418731 tgtttttttatcaattaatgtgtgccacgtgtgtaattcca 42418771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 38826927 - 38826786
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||| ||||||||||||||| || ||||||||| |||||||  ||||||||||||||||| | | ||||||||||||||||||||||||||    
T  38826927 gcgattttgcacctcatagttttaaacgaacggttttgccccctatagttttccccctttctgattttatgatccccatgacatttagtgctgatgtgtc 38826828  T
Q  98 tgtt--ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||  ||||||||||||||||||| ||||||||||||||||    
T  38826827 tgtttcttttatcaattaatgtgtgtcacgtgtgtaattcca 38826786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 36527423 - 36527562
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccct-atagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||||| | ||||| ||||| ||||||   ||||||||||||||||  || |||||||||||| ||| |||||||||    
T  36527423 gcgattttgcaccccatagttttaaacgatcaatttttccccttatagtttttcccctttctgattttatagtccccatgacatttggtgatgatgtgtc 36527522  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  36527523 tattttttatcaattaatgtgtgccacgtgtgtaattcca 36527562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 22740196 - 22740326
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| ||||||||||||||||||| |         
T  22740196 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctggt----- 22740290  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
      ||||||||||||||||||||||||| ||||||||||    
T  22740291 --ttttttatcaattaatgtgtgccacatgtgtaattc 22740326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 18864416 - 18864285
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||| |||||||||||| ||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||          
T  18864416 gcgattttgcacctcatagttttaaaagagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctga------ 18864323  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||||||||||||||||||||    
T  18864322 --ttttttatcaattaatgtgtgccacgtgtgtaattcca 18864285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 20418928 - 20419060
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||||||| ||| ||||||||||||||||||| |         
T  20418928 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctgattttatggtccccatgacatttagtgctggt----- 20419022  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||| ||||||||||||||||    
T  20419023 --ttttttatcaattaatgtgtgtcacgtgtgtaattcca 20419060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 37972000 - 37972131
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||| |||||||||||||| ||||           
T  37972000 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatggtccccatgacatttagcgctg------- 37972092  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
     |||||||||||||||||||||| ||||||||||||||||    
T  37972093 -gttttttatcaattaatgtgtgtcacgtgtgtaattcca 37972131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 42419031 - 42418910
Alignment:
Q  12 ccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatc 108  Q
    ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||| |       |||||||||    
T  42419031 ccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctggt-------ttttttatc 42418939  T
Q  109 aattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||||||||||||    
T  42418938 aattaatgtgtgccacgtgtgtaattcca 42418910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 36527812 - 36527683
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| |||  ||||||||||||          |||    
T  36527812 gcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtctccatgacattta----------gtc 36527723  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  36527722 tgttttttatcaattaatatgtgccacgtgtgtaattcca 36527683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 48359672 - 48359592
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatga 78  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||    
T  48359672 gcgattttgcaccacatagtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatga 48359592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 36527640 - 36527597
Alignment:
Q  179 gtagctttgagttttgtgtgccacgtgcctccttctctcaaaat 222  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  36527640 gtagctttgagtttcgtgtgccacgtgcctccttctctcaaaat 36527597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46816325 - 46816288
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg 38  Q
    |||||||||||||||||| |||||||||||||||||||    
T  46816325 gcgattttgcaccccatatttttaaacgagcgattttg 46816288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13863353 - 13863391
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  13863353 gcgattttgcaccccatgtttttaaacgagcgattttgc 13863391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 44599529 - 44599567
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  44599529 gcgattttgcaccccatgtttttaaacgagcgattttgc 44599567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44600149 - 44600111
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  44600149 gcgattttgcaccccatgtttttaaacgagcgattttgc 44600111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 13863966 - 13863933
Alignment:
Q  6 tttgcaccccatagttttaaacgagcgattttgc 39  Q
    ||||||||||||| ||||||||||||||||||||    
T  13863966 tttgcaccccatatttttaaacgagcgattttgc 13863933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 1e-54; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 48104718 - 48104857
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  48104718 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtc 48104817  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48104818 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 48104857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 50615635 - 50615496
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||    
T  50615635 gcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatgcgtc 50615536  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50615535 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 50615496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 50623463 - 50623324
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||    
T  50623463 gcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatgcgtc 50623364  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50623363 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 50623324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 49318180 - 49318044
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||| |||||||||| ||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49318180 gcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtc 49318081  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||| ||||||||||||||||||||||||||||||||    
T  49318080 tgttatttatcaattaatgtgtgccacgtgtgtaatt 49318044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 49318457 - 49318320
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatagttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctg 99  Q
    ||||||||||| |||||||||||||||||||||||||  |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49318457 gcgattttgcatcccatagttttaaacgagcgattttatcccctatagttttccctttctgattttatggttcccatgacatttagtgctgatgtgtctg 49318358  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  49318357 ttttttatcaattaatgtgtgccacatatgtaattcca 49318320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 50526486 - 50526350
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| | ||||||||||| ||||||||||||    
T  50526486 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccacatgacatttaatgctgatgtgtc 50526387  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||||||||||||||||||||||||||||||||||||    
T  50526386 tgttttttatcaattaatgtgtgccacgtgtgtaatt 50526350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 4692062 - 4692199
Alignment:
Q  2 cgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt-ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctg 99  Q
    |||||||||| || ||||||| |||||||| |||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4692062 cgattttgcatcctatagtttaaaacgagccattttgccccctatagtttccccctttctgattttatggttcccatgacatttagtgctgatgtgtctg 4692161  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    || |||||||||||||||||||||||||||||||||||    
T  4692162 ttatttatcaattaatgtgtgccacgtgtgtaattcca 4692199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 4692444 - 4692308
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcc-cctatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtctgt 100  Q
    |||||||||||||||||||||||||||||||||| || |||||||||   |||||||||||||||| ||| ||||||||||||||||||||||||||| |    
T  4692444 attttgcaccccatagttttaaacgagcgattttacctcctatagtttttcccctttctgattttatggtccccatgacatttagtgctgatgtgtctat 4692345  T
Q  101 tttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||||||||||||||||||||    
T  4692344 tttttatcaattaatgtgtgccacgtgtgtaattcca 4692308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 9347166 - 9347306
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| | |||||||||||| |||||||||||    
T  9347166 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccgcatgacatttagcgctgatgtgtc 9347265  T
Q  98 tg-ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  9347266 tgtttttttatcaattaatgtgtgccacgtgtgtaattcca 9347306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 50430095 - 50429955
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  | ||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  50430095 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctgattttatggtccccatgacatttagtgctgatatgtc 50429996  T
Q  98 tgtt-ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  50429995 tgtttttttatcaattaatgtgtgccacgtgtgtaattcca 50429955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 999539 - 999398
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| |||||||||||||||||||||| |||    
T  999539 gcgattttgcaacccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatgcgtc 999440  T
Q  98 tgtt--ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||  ||||||||||||||||||||||||||||||||||||    
T  999439 tgttttttttatcaattaatgtgtgccacgtgtgtaattcca 999398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 42611225 - 42611366
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcc-cctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||||||||||| |||||||||    
T  42611225 gcgattttgcacctcatagttttaaacgagcgattttgcctcctatagttttccccctttctgattttatggttcccatgacatttagtgttgatgtgtc 42611324  T
Q  98 tg--ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||  |||||||||||||||| |||||||||||||||||||||    
T  42611325 tgttttttttatcaattaatatgtgccacgtgtgtaattcca 42611366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 9347562 - 9347425
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtct-g 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| |||||||||||||||||||| ||||||||||      
T  9347562 attttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgttgatgtgtctat 9347463  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  9347462 ttttttatcaattaatgtgtgccacatgtgtaattcca 9347425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 21687068 - 21687205
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctg- 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  || |||||||||||||| ||| ||||||||||||||||||||| ||||||     
T  21687068 attttgcaccccatagttttaaacgagcgattttgccccctatagttttcctcctttctgattttatggtccccatgacatttagtgctgatatgtctgt 21687167  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21687168 ttttttatcaattaatgtgtgccacgtgtgtaattcca 21687205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 28634171 - 28634031
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  28634171 gcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtc 28634072  T
Q  98 tgtt-ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  28634071 tgtttttttatcaattaatgtgtaccacgtgtgtaattcca 28634031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 46824289 - 46824153
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  |||||||| |||||||| ||| ||||||||||||||||||||  |||||||    
T  46824289 attttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttttgattttatggtccccatgacatttagtgctgaaatgtctgt 46824190  T
Q  101 tttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||| ||||||||||||||||    
T  46824189 tttttatcaattaatgtgtgtcacgtgtgtaattcca 46824153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 27172155 - 27172288
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| | |||||||||||||||||| ||   ||||    
T  27172155 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatgcttcccatgacatttagtgttg---tgtc 27172251  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||||||||||||||||||||||||||||||||||||    
T  27172252 tgttttttatcaattaatgtgtgccacgtgtgtaatt 27172288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 999151 - 999289
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagttccc-cctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||  | |||||||||||||| |||  ||||||||||||||| | ||||||||    
T  999151 gcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttctcctttctgattttatggtctccatgacatttagtgttaatgtgtct 999250  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||||||||||||||||||||||    
T  999251 gttttttatcaattaatgtgtgccacgtgtgtaattcca 999289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 6703905 - 6703772
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgt 100  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||  ||||||||||||||||| ||| | ||||||||||||||||||| |||||||    
T  6703905 attttgcaccccatagttttaaacgagcgattttgcctcatatagttttccccctttctgattttatggtcctcatgacatttagtgctgatatgtctgt 6703806  T
Q  101 tttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    ||||||||||||||||| ||||||||||||||||    
T  6703805 tttttatcaattaatgtatgccacgtgtgtaatt 6703772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 44911065 - 44911204
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||| |||||||| |||||||||    
T  44911065 gcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgatatttagtgttgatgtgtc 44911164  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| |||||||||||||| |||||||| |||||||||||    
T  44911165 tgttatttatcaattaatgcgtgccacgagtgtaattcca 44911204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 28633761 - 28633892
Alignment:
Q  2 cgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||||||| |          
T  28633761 cgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctggt------ 28633854  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
     ||||||||||||||||||||||||||||||||||||||    
T  28633855 -ttttttatcaattaatgtgtgccacgtgtgtaattcca 28633892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 42611628 - 42611488
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||| ||||||||||||| |||||||||||||| |||||||   |||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  42611628 gcgattttgcacctcatagttttaaacaagcgattttgccccctatagtttttcccctttctgattttatggtccccataacatttagtgctgatgtgtc 42611529  T
Q  98 tgtt-ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| |||||||||||||||||||||||||||| |||||||    
T  42611528 tgtttttttatcaattaatgtgtgccacgtgtgcaattcca 42611488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 44911451 - 44911315
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||| || |||| ||||||||||||||||||| |||||||  || |||||||||||||| ||||| ||||||||||| ||||||||||||    
T  44911451 gcgattttgcaccctattgtttaaaacgagcgattttgccccctatagttttcctcctttctgattttatggttctcatgacatttaatgctgatgtgtc 44911352  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||| ||||||||||||||||||||||||||||||||    
T  44911351 tgttatttatcaattaatgtgtgccacgtgtgtaatt 44911315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 20371081 - 20371214
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcccc-tatagttc-cccctttctgattttagggttcccatgacatttagtgctgatgtgtctgtt 101  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||  |||||||||||||||| ||| || |||||||||||||||||| ||||||||    
T  20371081 attttgcaccccatagttttaaacgagcgattttgccccctgtagttttcccctttctgattttatggtccctatgacatttagtgctgatatgtctgtt 20371180  T
Q  102 ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||  |||||||||||||||    
T  20371181 ttttatcaattaatgtgtg--acgtgtgtaattcca 20371214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 50949579 - 50949440
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||| | ||| |||| ||||||||||||||||||| |||||||   |||||||||||||||| ||||| |||||||||||||||||||||||     
T  50949579 gcgattttgcatctcattgtttaaaacgagcgattttgccccctatagtttttcccctttctgattttatggttctcatgacatttagtgctgatgtgtg 50949480  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  50949479 tgttatttatcaattaatgtgtgccacgtgtgtaattcca 50949440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 44224131 - 44223997
Alignment:
Q  3 gattttgcaccccatagttttaaacgagcgattttg-cccctatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtctg 99  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||   |||||||||||||||| ||| |  |||||||||||||||||| ||||||    
T  44224131 gattttgcatcccatagttttaaacgagcgattttgtcccctatagttttacccctttctgattttatggtccttatgacatttagtgctgatatgtctg 44224032  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    ||||||||||||||||||||| |||||||||||||    
T  44224031 ttttttatcaattaatgtgtgtcacgtgtgtaatt 44223997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 50429696 - 50429836
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||  |||  |||||||||||||| || |||||||||||||||||||||||||||    
T  50429696 gcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcatcctttctgattttatgg-tcccatgacatttagtgctgatgtgtc 50429794  T
Q  98 tg--ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||  ||||||||||||||| ||||||||||||||||||||||    
T  50429795 tgttttttttatcaattaacgtgtgccacgtgtgtaattcca 50429836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 21687481 - 21687348
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgccc-ctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||| ||| ||||||||||||||||||||||| ||| || |||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  21687481 gcgattttgtacctcatagttttaaacgagcgatttttccctctgtagttttccccctttctgattttatggtccccatgacatttagtgctgatgtgtc 21687382  T
Q  98 tgtt-ttttatcaattaatgtgtgccacgtgtgt 130  Q
    |||| |||||||||||||||||||||||||||||    
T  21687381 tgtttttttatcaattaatgtgtgccacgtgtgt 21687348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 32163057 - 32162925
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| ||| |||||||||||||||||||||         
T  32163057 gcgattttgcaccccatagttttaaacgagcgattttgccccttatagttttccccctttctgattttatggtccccatgacatttagtgctgat----- 32162963  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      |||||||||||||||||||| |||||||||||||||||    
T  32162962 --ttttttatcaattaatgtgttccacgtgtgtaattcca 32162925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 49317794 - 49317930
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctg- 99  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||||     
T  49317794 attttgcatcccatagttttaaacgagcgattttaccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatgtgtctgt 49317893  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||| || ||||||||||||||||    
T  49317894 ttttttatcaattaatgt-tgtcacgtgtgtaattcca 49317930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 13918486 - 13918618
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| |||  | ||||||||||||| | || ||||    
T  13918486 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtcactatgacatttagtgtttatatgtc 13918585  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgt 130  Q
    |||||||||||||||||||||| ||||||||||    
T  13918586 tgttttttatcaattaatgtgtaccacgtgtgt 13918618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 27172555 - 27172424
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||||| |          
T  27172555 gcgattttgcatcccattgttttaaacgagcgattttgcccctatagttttccccctttctgattttatggtccccatgacatttagtgctggt------ 27172462  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
     |||||||||||||||||| |||||||||||||||||||    
T  27172461 -ttttttatcaattaatgtctgccacgtgtgtaattcca 27172424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 26814734 - 26814865
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| |||||||||||||||||             
T  26814734 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgc--------g 26814825  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  26814826 ttttttttatcaattaatgtgtgccacgtgtgtaattcca 26814865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 46823883 - 46824014
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| |||||||||||||||| |||          
T  46823883 gcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtacccatgacatttagtgttga------ 46823976  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||||||||||||||||||||    
T  46823977 --ttttttatcaattaatgtgtgccacgtgtgtaattcca 46824014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 48105130 - 48104998
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| ||||||| ||||||||||| |         
T  48105130 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgatatttagtgctggt----- 48105036  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||| ||||||||||||||||||||    
T  48105035 --ttttttatcaattaatgcgtgccacgtgtgtaattcca 48104998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 50615289 - 50615376
Alignment:
Q  50 ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50615289 ccccctttctgattttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatatgtgccacgtgtgtaattcca 50615376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 50623117 - 50623204
Alignment:
Q  50 ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50623117 ccccctttctgattttatggtccccatgacatttaatgctgatgtgtctgttttttatcaattaatatgtgccacgtgtgtaattcca 50623204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 20480207 - 20480307
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  20480207 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtc 20480306  T
Q  98 t 98  Q
    |    
T  20480307 t 20480307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 6703500 - 6703630
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||  |||||| |||||||||||| ||| ||||||||||||||||         |    
T  6703500 gcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccatgacatttagtg---------c 6703590  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    || |||||||||||||||||||||||||||||||||||||    
T  6703591 tggtttttatcaattaatgtgtgccacgtgtgtaattcca 6703630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 26815133 - 26815003
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctata--gttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||| ||| ||||||| |||||||||    ||       
T  26815133 gcgattttgcaccccatagttttaaacgagcgattttgccccctataattttccccctttctgattttatggtccccatgatatttagtgc----gt--- 26815041  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||||||||||||||||||||    
T  26815040 --ttttttatcaattaatgtgtgccacgtgtgtaattcca 26815003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 50949241 - 50949320
Alignment:
Q  58 ctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  50949241 ctgattttatggttctcatgacatttagtgctgatgtgtctgttatttatcaattaatgtgtgtcacgtgtgtaattcca 50949320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 13918881 - 13918748
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||| ||||||||||||||| |||||||| |||||||||  ||||||| || |||||||| ||| |||||||||||||||||||           
T  13918881 gcgattttgcacctcatagttttaaacgaacgattttgccccctatagttttccccccttttgattttatggtccccatgacatttagtgctg------t 13918788  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | ||||||||||||||||||||| ||||||||||||||||    
T  13918787 ttttttttatcaattaatgtgtgtcacgtgtgtaattcca 13918748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 20371367 - 20371272
Alignment:
Q  1 gcgattttgcacccc-atagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgat 92  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||| |||||||    
T  20371367 gcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctttctgattttatggtccccatgacatttaatgctgat 20371272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 20480626 - 20480499
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccctata--gttccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    |||||||||||||| |||||||||||||||||| ||| ||||||||  ||| |||||||||||||||| ||| ||||||||||||| ||||||           
T  20480626 gcgattttgcaccctatagttttaaacgagcga-tttccccctatagtgtttcccctttctgattttatggtccccatgacatttaatgctga------- 20480535  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
     ||||||||  ||||||||||||||||||||| ||||    
T  20480534 -ttttttatgcattaatgtgtgccacgtgtgtgattc 20480499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 47498342 - 47498433
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgccc-ctatag--ttccccctttctgattttagggttcccatgacatttagtgctgat 92  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||  ||| |||||| |||||||| |||  ||||||||||||||||||||    
T  47498342 attttgcatcccatagttttaaacaagcgattttgccctctatagttttctccctttttgattttatggtctccatgacatttagtgctgat 47498433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 9347347 - 9347391
Alignment:
Q  178 ggtagctttgagttttgtgtgccacgtgcctccttctctcaaaat 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  9347347 ggtagctttgagtttcgtgtgccacgtgcctccttctctcaaaat 9347391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 32162772 - 32162867
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcccctatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtctgtt 101  Q
    |||||||||||||||||||||||||||| ||    |||||||||||   |||||||||||||||| ||| ||||||||||||| ||||||| ||| ||||    
T  32162772 attttgcaccccatagttttaaacgagc-at----cccctatagtttttcccctttctgattttatggtccccatgacatttaatgctgatatgtttgtt 32162866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 44223745 - 44223851
Alignment:
Q  22 ttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatcaattaatgtg 118  Q
    ||||||||||||||||| |||||||||  || |||||||||||||||| || || |||||||||||||||||        |||||||||||||||||| |    
T  44223745 ttaaacgagcgattttgccccctatagtttttcccctttctgattttatgg-tctcatgacatttagtgctg--------gttttttatcaattaatgcg 44223835  T
Q  119 tgccacgtgtgtaatt 134  Q
    ||||| ||||||||||    
T  44223836 tgccatgtgtgtaatt 44223851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 19008764 - 19008658
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctata--gttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||| ||||| || |||||| ||||||||   ||||||||||||||||| | ||| ||| |  ||| | | |||||||||||    
T  19008764 gcgattttgcaccccatagtttaaaacgtgcaattttgccccctataattttccccctttctgatttgatggtaccccttgcatctggcgctgatgtgtc 19008665  T
Q  98 tgttttt 104  Q
    |||||||    
T  19008664 tgttttt 19008658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 6712215 - 6712281
Alignment:
Q  6 tttgcaccccatagttttaaacgagcgattt--tgcccctatag--ttccccctttctgattttagg 68  Q
    |||||||||||||||||||||||||||||||  | |||||||||  ||||||||||  |||||||||    
T  6712215 tttgcaccccatagttttaaacgagcgattttatccccctatagttttcccccttttcgattttagg 6712281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 42611447 - 42611407
Alignment:
Q  178 ggtagctttgagttttgtgtgccacgtgcctccttctctca 218  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  42611447 ggtagcttcgagtttcgtgtgccacgtgcctccttctctca 42611407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 50615417 - 50615461
Alignment:
Q  178 ggtagctttgagttttgtgtgccacgtgcctccttctctcaaaat 222  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||    
T  50615417 ggtagctttgagttgtgtgtgccacatgcctcattctctcaaaat 50615461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 50623245 - 50623289
Alignment:
Q  178 ggtagctttgagttttgtgtgccacgtgcctccttctctcaaaat 222  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||    
T  50623245 ggtagctttgagttgtgtgtgccacatgcctcattctctcaaaat 50623289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6002908 - 6002870
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  6002908 gcgattttgcaccccatgtttttaaacgagcgattttgc 6002870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 49284449 - 49284487
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  49284449 gcgattttgcaccccatgtttttaaacgagcgattttgc 49284487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 6002279 - 6002315
Alignment:
Q  3 gattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||  ||||||||||||||||||||    
T  6002279 gattttgcaccccatgtttttaaacgagcgattttgc 6002315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 3e-52; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 7654562 - 7654423
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||| || |||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  7654562 gcgattttgcaccccatagttttaaacgagtgactttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatgtgtc 7654463  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  7654462 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 7654423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 22755103 - 22754965
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagttc-cccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||  ||||||||||||||||  || ||||||||||||||||||||| |||||    
T  22755103 gcgattttgcaccacatagttttaaacgagcgattttgccccctatagttttcccctttctgattttattgtccccatgacatttagtgctgatatgtct 22755004  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22755003 gttttttatcaattaatgtgtgccacgtgtgtaattcca 22754965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 33974313 - 33974173
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| |||  |||||||||||||||||||| ||||    
T  33974313 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtctccatgacatttagtgctgatatgtc 33974214  T
Q  98 tgtt-ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  33974213 tgtttttttatcaattaatgtgtgccacgtgtgtaattcca 33974173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 10087872 - 10087734
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| | ||||||||||||||||||| |||     
T  10087872 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggt-ctcatgacatttagtgctgatatgtt 10087774  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  10087773 tgttttttatcgattaatgtgtgccacgtgtgtaattcca 10087734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 29074386 - 29074247
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||| |||||||||||||| |||| |||||||  | ||||||||||||||| | ||||||||||||||||||||||||||||    
T  29074386 gcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattttatgattcccatgacatttagtgctgatgtgtc 29074287  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  29074286 tgttatttatcaattaatgtgtgtcacgtgtgtaattcca 29074247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 29079150 - 29079011
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||| |||||||||||||| |||| |||||||  | ||||||||||||||| | ||||||||||||||||||||||||||||    
T  29079150 gcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattttatgattcccatgacatttagtgctgatgtgtc 29079051  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  29079050 tgttatttatcaattaatgtgtgtcacgtgtgtaattcca 29079011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 29106959 - 29106820
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||| |||||||||||||| |||| |||||||  | ||||||||||||||| | ||||||||||||||||||||||||||||    
T  29106959 gcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattttatgattcccatgacatttagtgctgatgtgtc 29106860  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  29106859 tgttatttatcaattaatgtgtgtcacgtgtgtaattcca 29106820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 2354449 - 2354587
Alignment:
Q  2 cgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    |||||||||| ||||| |||| |||||||||||||| |||| |||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2354449 cgattttgcatcccattgtttaaaacgagcgatttttccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtct 2354548  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||| ||||||||||||| |||||||||||||||||||||    
T  2354549 gttatttatcaattaatatgtgccacgtgtgtaattcca 2354587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 2354824 - 2354691
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagttccccctttc-tgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||||||| |||| |||||||| |||||||||| |||||||  ||| ||| |||||||| ||||||||||||||||| |||||||||||||    
T  2354824 gcgattttgcaccccattgtttaaaacgagccattttgccccctatagttttccccttcatgattttatggttcccatgacatttaatgctgatgtgtct 2354725  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaa 132  Q
    ||| ||||||||||||||||||||||||||||||    
T  2354724 gttatttatcaattaatgtgtgccacgtgtgtaa 2354691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 32734010 - 32733874
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||| ||  | ||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  32734010 gcgattttgcatcccatagttttaaacgagcgattttgccccctataattttctccctttctgattttatggttcccatgatatttagtgctgatatgtc 32733911  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    ||||| |||| |||||||||||| |||||||||||||    
T  32733910 tgtttattattaattaatgtgtgtcacgtgtgtaatt 32733874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 13176660 - 13176798
Alignment:
Q  2 cgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    |||||||| | |||||  ||||||| ||||||||||||||| |||||||  ||| ||||||||||||| ||| ||| ||||||||||||||||| |||||    
T  13176660 cgattttgtatcccatgattttaaatgagcgattttgccccctatagttttcccactttctgattttatggtccccgtgacatttagtgctgatatgtct 13176759  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  13176760 gttttttatcaattaatgtgtgtcacgtgtgtaattcca 13176798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 32733598 - 32733725
Alignment:
Q  2 cgattttgcaccccatagttttaaacgagcgattttgcc-cctatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||||   |||||||||||||||| ||||||||||||||||||||||||           
T  32733598 cgattttgcatcccatagttttaaacgagcaattttgcctcctatagtttttcccctttctgattttatggttcccatgacatttagtgctga------- 32733690  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
     |||||| ||||||||| ||||||||||||||||||    
T  32733691 -ttttttttcaattaatatgtgccacgtgtgtaatt 32733725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 22684370 - 22684240
Alignment:
Q  3 gattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctg 99  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||  || |||||||||||||||| ||| ||||||| ||||||||||| |           
T  22684370 gattttgcaccccatagttttaaacaaacgattttgccccctatagtttttcccctttctgattttatggtccccatgatatttagtgctggt------- 22684278  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  22684277 ttttttatcaattaatgtgtgtcacgtgtgtaattcca 22684240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 22754698 - 22754828
Alignment:
Q  3 gattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctg 99  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||  || |||||||||||||||| ||| ||||||| ||||||||||| |           
T  22754698 gattttgcaccccatagttttaaacaaacgattttgccccctatagtttttcccctttctgattttatggtccccatgatatttagtgctggt------- 22754790  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  22754791 ttttttatcaattaatgtgtgtcacgtgtgtaattcca 22754828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 13177068 - 13176947
Alignment:
Q  3 gattttgcaccccatagttttaaacgagcgattttgcccc-tatagt--tccccctttctgattttagggttcccatgacatttagtgctgatgtgtctg 99  Q
    |||||| |||| |||||||||||||||||||||||||||| ||||||  |||||||||||||||||| ||| ||||||||||||| | ||||            
T  13177068 gattttacacctcatagttttaaacgagcgattttgccccttatagttgtccccctttctgattttatggtccccatgacatttactactga-------- 13176977  T
Q  100 ttttttatcaattaatgtgtgccacgtgtg 129  Q
    ||||||||||||||||||||||||||||||    
T  13176976 ttttttatcaattaatgtgtgccacgtgtg 13176947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 33973919 - 33974033
Alignment:
Q  16 atagttttaaacgagcgattttg-cccctatagttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatcaattaa 114  Q
    ||||||||| ||||||||||||| |||||||||||   ||||||| |||||| ||| |||||||||||||||| ||        ||||||||||||||||    
T  33973919 atagttttacacgagcgattttgtcccctatagtttttcctttctaattttatggtccccatgacatttagtgttg--------gttttttatcaattaa 33974010  T
Q  115 tgtgtgccacgtgtgtaattcca 137  Q
    |||| ||||||||||||||||||    
T  33974011 tgtgcgccacgtgtgtaattcca 33974033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33829030 - 33829068
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  33829030 gcgattttgcaccccatgtttttaaacgagcgattttgc 33829068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33829650 - 33829612
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  33829650 gcgattttgcaccccatgtttttaaacgagcgattttgc 33829612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 5e-51; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 25162325 - 25162188
Alignment:
Q  3 gattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctg 99  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  25162325 gattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtctg 25162226  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25162225 ttttttatcaattaatgtgtgccacgtgtgtaattcca 25162188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 169453 - 169317
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||| |||||||| ||| |||||||||||||||| |||||||||    
T  169453 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttttgattttatggtccccatgacatttagtgttgatgtgtc 169354  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||||||||||||||||||||||||||||||||||||    
T  169353 tgttttttatcaattaatgtgtgccacgtgtgtaatt 169317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 28196386 - 28196522
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  28196386 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttaatgctgatgtgtc 28196485  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||||||||||||||||| ||||||||||||||||||    
T  28196486 tgttttttatcaattaatatgtgccacgtgtgtaatt 28196522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 28196787 - 28196647
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| |||||||||||||||| |||||||||    
T  28196787 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgatgatgtgtc 28196688  T
Q  98 tgtt-ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  28196687 tgtttttttatcaattaatgtgtgccacgtgtgtaattcca 28196647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 9023284 - 9023420
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||  |||||||| |||||||| ||| ||||||||||||| ||||||| ||||    
T  9023284 gcgattttgcaccccatagttttaaacgagtgattttgccccctatagttttccccctttatgattttatggtccccatgacatttaatgctgatatgtc 9023383  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||||||||||||||||||||||||||||||||||||    
T  9023384 tgttttttatcaattaatgtgtgccacgtgtgtaatt 9023420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 23539879 - 23540018
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc---tatagttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||| |||||| ||||||||||||   |||  |||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  23539879 gcgattttgcaccccatagtttaaaacgaacgattttgccccctatatttttcctcctttctgattttatggttcccatgacatttagtgctgatgtgtc 23539978  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | || |||||||||||||||||||||||||||||||||||    
T  23539979 tattatttatcaattaatgtgtgccacgtgtgtaattcca 23540018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 32703265 - 32703401
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||| |||||||| |||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||| ||||||||| ||||||||||||    
T  32703265 gcgattatgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccgtgacatttaatgctgatgtgtc 32703364  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||||||||||||||||||||||||||||||||||||    
T  32703365 tgttttttatcaattaatgtgtgccacgtgtgtaatt 32703401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 32703664 - 32703524
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  |||| |||||||||||| ||| |||||||||||||||| |||||||||    
T  32703664 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccatgacatttagtgatgatgtgtc 32703565  T
Q  98 tgtt-ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  32703564 tgtttttttatcaattaatgtgtgccacatgtgtaattcca 32703524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 39744479 - 39744339
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||  ||| ||||||||||||||||||||| ||||    
T  39744479 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttgtggtccccatgacatttagtgctgatatgtc 39744380  T
Q  98 tgtt-ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  39744379 tgtttttttatcaattaatgtgtgtcacgtgtgtaattcca 39744339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 9380347 - 9380486
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| | |||||||||||||  |||| ||||    
T  9380347 gcgattttgccccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtcctcatgacatttagtattgatatgtc 9380446  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9380447 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 9380486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 23540266 - 23540127
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||     
T  23540266 gcgattttgcaccctatagttttaaacgagcgattttaccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatgtgtg 23540167  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  23540166 tgttttttattaattaatgtgtgtcacgtgtgtaattcca 23540127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 48406004 - 48406141
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctg- 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||| |||| ||| |||||||||||||||| |||||||||||     
T  48406004 attttgcaccccatagttttaaacgagcgattttgccccctataattttccccctttctgactttatggtccccatgacatttagtgatgatgtgtctgt 48406103  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48406104 ttttttatcaattaatgtgtgccacgtgtgtaattcca 48406141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 292825 - 292961
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgt 100  Q
    |||||||| | |||||||||||||||||||||||||||| || ||||  ||||||||||||||||| ||| ||||||||||||||||||||| |||||||    
T  292825 attttgcatctcatagttttaaacgagcgattttgccccctacagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtctgt 292924  T
Q  101 tttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||| |||||||||||||||||||||||||||||    
T  292925 tttttattaattaatgtgtgccacgtgtgtaattcca 292961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 26207400 - 26207536
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |||||||  || |||||||||||||| ||||||||||||||||| |||||||||||     
T  26207400 gcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctgattttatggttcccatgacatttaatgctgatgtgtt 26207499  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||| ||||||||||||||||||||||||||||||||    
T  26207500 tgttatttatcaattaatgtgtgccacgtgtgtaatt 26207536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 48406399 - 48406263
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||   |||||||||||||||| ||| ||||||||||||| |||| |||||||    
T  48406399 gcgattttgcaccctatagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatggtccccatgacatttaatgcttatgtgtc 48406300  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    ||||||||||||||||||||||||||||||| |||||    
T  48406299 tgttttttatcaattaatgtgtgccacgtgtataatt 48406263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 169054 - 169194
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||   |||||||||||||||| ||| |||||||||||||||| |||||||||    
T  169054 gcgattttgcaccccataattttaaacgagcgattttgccccctatagtttttcccctttctgattttatggtccccatgacatttagtgttgatgtgtc 169153  T
Q  98 tg-ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    || ||||||||||||||||||| | ||||||||||||||||    
T  169154 tgtttttttatcaattaatgtgagtcacgtgtgtaattcca 169194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 39086637 - 39086496
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||||||  ||||||||||||||||| |||   ||||||||||||||||||||||||    
T  39086637 gcgattttgcacctaatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtctgcatgacatttagtgctgatgtgtc 39086538  T
Q  98 tgtt--ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||  |||||||||||||||||||| |||||||||||||||    
T  39086537 tgttttttttatcaattaatgtgtgctacgtgtgtaattcca 39086496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 43292371 - 43292237
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagttc-cccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||||||| | | || ||||||||||||| |||| |||||    
T  43292371 gcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttctgattttatg-tcccaatgacatttagtgttgatatgtct 43292273  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    ||||||||||||||||||||||||||||||||||||    
T  43292272 gttttttatcaattaatgtgtgccacgtgtgtaatt 43292237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 39912501 - 39912365
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcc-cctatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||||||||   | ||||| ||||||||  || ||||||||||||||||||||| ||||    
T  39912501 gcgattttgcatcccatagttttaaacgagtgattttgccacctatagtttttcgcctttatgattttatagtccccatgacatttagtgctgatatgtc 39912402  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
     ||||||||||||||||||||||||||||||||||||    
T  39912401 cgttttttatcaattaatgtgtgccacgtgtgtaatt 39912365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 25161918 - 25162050
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||| || ||| ||||||||||||||||||| |         
T  25161918 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattgtatggtccccatgacatttagtgctggt----- 25162012  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||| ||||||||||||||||    
T  25162013 --ttttttatcaattaatgtgtgtcacgtgtgtaattcca 25162050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 9380755 - 9380624
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| |||||||||||||||||||           
T  9380755 gcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctg------- 9380663  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
     |||||||||| ||||||||||||||| ||||||||||||    
T  9380662 -gttttttatccattaatgtgtgccacttgtgtaattcca 9380624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26207760 - 26207642
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |||||||  || |||||||||||||| ||||||||||| |||||||| |||||||||    
T  26207760 gcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctgattttatggttcccatgatatttagtgttgatgtgtc 26207661  T
Q  98 tgttttttatcaattaatg 116  Q
    |||| ||||||||||||||    
T  26207660 tgttatttatcaattaatg 26207642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 293231 - 293099
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| ||  ||||||| ||||||||||| |         
T  293231 gcgattttgcaccccatagttttaaacgagcgattttgccccgtatagttttccccctttctgattttatggcccccatgaaatttagtgctggt----- 293137  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||||||| ||||||||||||    
T  293136 --ttttttatcaattaatgtgtgccacatgtgtaattcca 293099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 4239380 - 4239273
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc---tatagttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||  ||||||||||||||||||| ||| |||||||||||||||| |||| ||||    
T  4239380 gcgattttgcaccccatagttttaaacgagcgattttgccccctatatttttccccctttctgattttatggtccccatgacatttagtgttgatatgtc 4239281  T
Q  98 tgtttttt 105  Q
    ||||||||    
T  4239280 tgtttttt 4239273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 12757806 - 12757946
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgt- 96  Q
    ||||||||||| | |||||||||||||||||||||||| |||||||||  || || ||||||||||||| ||| ||||||| ||||||||||||| | |     
T  12757806 gcgattttgcatctcatagttttaaacgagcgattttgtcccctatagtttttcctctttctgattttatggtccccatgatatttagtgctgatatctg 12757905  T
Q  97 ctgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
     | ||||||||||||||||||||| ||||||||||||||||    
T  12757906 tttttttttatcaattaatgtgtggcacgtgtgtaattcca 12757946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 9023694 - 9023562
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||| ||| ||||| | |||||||| || |         
T  9023694 gcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccctttctgattttatggtccccatcagatttagtgttggt----- 9023600  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      |||||||||||||||| |||||||||||||||||||||    
T  9023599 --ttttttatcaattaatatgtgccacgtgtgtaattcca 9023562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 12758214 - 12758086
Alignment:
Q  5 ttttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgtt 101  Q
    |||||||| |||||||||||||||||| |||||||||| |||||||  ||||||||||||||||| ||| || |||||||||||||||  |       ||    
T  12758214 ttttgcacgccatagttttaaacgagcaattttgccccctatagttttccccctttctgattttatggtccctatgacatttagtgctagt-------tt 12758122  T
Q  102 ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||||||||||||    
T  12758121 ttttatcaattaatgtgtgccacgtgtgtaattcca 12758086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 39744070 - 39744199
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| ||| |||  ||||||||||           
T  39744070 gcgattttccaccccataattttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccgtgatgtttagtgctg------- 39744162  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
     |||||||||||||||||||||||||||||||||||||    
T  39744163 -gttttttatcaattaatgtgtgccacgtgtgtaattc 39744199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 39912106 - 39912220
Alignment:
Q  14 ccatagttttaaacgagcgattttgcccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatcaat 111  Q
    |||||||||||||||| |||||||||||||||||  ||||||||||||||||||| ||| ||||| | |||||||| ||        |||||||||||||    
T  39912106 ccatagttttaaacgaacgattttgcccctatagttttccccctttctgattttatggtccccatcagatttagtgttg--------gttttttatcaat 39912197  T
Q  112 taatgtgtgccacgtgtgtaatt 134  Q
    |||||||||||||||||||||||    
T  39912198 taatgtgtgccacgtgtgtaatt 39912220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 43292077 - 43292168
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgct 89  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||| | ||||||||||||||||    
T  43292077 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatggtcctcatgacatttagtgct 43292168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 44468937 - 44468849
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtg 87  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||  |||| ||||||||||||||  | |||||||||||||||||    
T  44468937 gcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcctcctttctgatttta-tgatcccatgacatttagtg 44468849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 39086455 - 39086411
Alignment:
Q  178 ggtagctttgagttttgtgtgccacgtgcctccttctctcaaaat 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  39086455 ggtagctttgagtttcgtgtgccacgtgcctccttctctcaaaat 39086411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36095857 - 36095895
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  36095857 gcgattttgcaccccatgtttttaaacgagcgattttgc 36095895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36096489 - 36096451
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  36096489 gcgattttgcaccccatgtttttaaacgagcgattttgc 36096451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 50678819 - 50678857
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  50678819 gcgattttgcaccccatgtttttaaacgagcgattttgc 50678857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 50679437 - 50679400
Alignment:
Q  2 cgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  50679437 cgattttgcaccccatgtttttaaacgagcgattttgc 50679400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 43051264 - 43051228
Alignment:
Q  3 gattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||  ||||||||||||||||||||    
T  43051264 gattttgcaccccatgtttttaaacgagcgattttgc 43051228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 24473782 - 24473646
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  24473782 gcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtc 24473683  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||||||||||||||||||||||||| ||||||||||    
T  24473682 tgttttttatcaattaatgtgtgccatgtgtgtaatt 24473646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 37396748 - 37396891
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  37396748 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtc 37396847  T
Q  98 tgttttttatc----aattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||    |||||||||||||||||||||||||||||    
T  37396848 tgttttttatcaattaattaatgtgtgccacgtgtgtaattcca 37396891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 34498569 - 34498430
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc---tatagttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||| || |||| ||||||   |||  ||||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  34498569 gcgattttgcaccccatagttttaaacaagagattatgccccctatatttttccccctttctgattttatggtccccatgacatttagtgctgatatgtc 34498470  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34498469 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 34498430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 41662561 - 41662701
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||  | |||||||| |||||| |||||||||||||||||||||||||||||     
T  41662561 gcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttctccctttctaattttatggttcccatgacatttagtgctgatgtgtt 41662660  T
Q  98 tg-ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  41662661 tgtttttttatcaattaatgtgtgccacgtgtgtaattcca 41662701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 24473385 - 24473522
Alignment:
Q  3 gattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctg 99  Q
    |||||||||||||||| ||||||| ||||||||||||||| |||||||  ||||||||||||||||| ||| |||||||||||||||| ||| |||||||    
T  24473385 gattttgcaccccataattttaaatgagcgattttgccccctatagtttcccccctttctgattttatggtccccatgacatttagtgatgacgtgtctg 24473484  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  24473485 ttttttatcaattaacgtgtgccacgtgtgtaattcca 24473522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 16169606 - 16169482
Alignment:
Q  16 atagttttaaacgagcgattttgcccc-tatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatcaatt 112  Q
    ||||||||||||||||||||||||||| |||||||   |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  16169606 atagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatggttcccatgacatttagtgctgatatgtctgttttttatcaatt 16169507  T
Q  113 aatgtgtgccacgtgtgtaattcca 137  Q
    |||||||| ||||||||||||||||    
T  16169506 aatgtgtgtcacgtgtgtaattcca 16169482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 6199110 - 6198970
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| | | ||||||||||||||||||||  ||||    
T  6199110 gcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatgatccccatgacatttagtgctgaaatgtc 6199011  T
Q  98 tgtt-ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  6199010 tgtttttttatcaattaatgtgtgccacatgtgtaattcca 6198970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 34498162 - 34498291
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc-ccctatag-ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| ||||||||||||||||||||           
T  34498162 gcgattttgcaccccatagttttaaacgagcgattttgcaccctatagtttccccctttctgattttatggtccccatgacatttagtgctga------- 34498254  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      |||||||||||||||||||||||||||||||||||||    
T  34498255 --tttttatcaattaatgtgtgccacgtgtgtaattcca 34498291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 9623542 - 9623678
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagttcccccttt--ctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||  ||||||  ||||||||| ||| ||| ||||||||||||||||| ||||    
T  9623542 gcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctttttctgattttatggtccccttgacatttagtgctgatatgtc 9623641  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||||||||||||||||| |||| |||||||||||||    
T  9623642 tgttttttatcaattaatatgtgtcacgtgtgtaatt 9623678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 134
Target Start/End: Original strand, 15444264 - 15444387
Alignment:
Q  14 ccatagttttaaacgagcgattttgc-ccctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatcaa 110  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||| |||||||| |||  |||||||||||||||||||| | |||||||||||||||    
T  15444264 ccatagttttaaacgagcgattttgctccctatagttttccccctttatgattttatggtctccatgacatttagtgctgatatctctgttttttatcaa 15444363  T
Q  111 ttaatgtgtgccacgtgtgtaatt 134  Q
    ||||| ||||||||||||||||||    
T  15444364 ttaatatgtgccacgtgtgtaatt 15444387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 37397159 - 37397028
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||||  ||||||||||||||||||| ||| |||||||||||||||||||           
T  37397159 gcgattttgccccccatagttttaaacgagcgactttgccccctatagatttccccctttctgattttatggtccccatgacatttagtgctg------- 37397067  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
     |||||||||||||||||||||||||||||||||||||||    
T  37397066 -gttttttatcaattaatgtgtgccacgtgtgtaattcca 37397028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 6198698 - 6198830
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||  |||||| |||||||||||| ||| ||||||||||||||||||| |         
T  6198698 gcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccatttctgattttatggtccccatgacatttagtgctggt----- 6198792  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||||||||||||||||||||    
T  6198793 --ttttttatcaattaatgtgtgccacgtgtgtaattcca 6198830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 33727119 - 33726986
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||  |||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| |||||||||||||||||||           
T  33727119 gcgattttgcacttcatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctg------g 33727026  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  33727025 ttttttttatcaattaatgtgtgccacgtgtgtaattcca 33726986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 33726734 - 33726844
Alignment:
Q  30 gcgattttgcc-cctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgt 126  Q
    ||||||||||| |||||||||  ||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||| |||||||| ||| |    
T  33726734 gcgattttgcctcctatagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaataaatgtgtgtcacat 33726833  T
Q  127 gtgtaattcca 137  Q
    |||||||||||    
T  33726834 gtgtaattcca 33726844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 20861652 - 20861519
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcc-cctata--gttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||   ||||||||||||||||||| ||| ||||||||||||||||||            
T  20861652 gcgattttgcaccccatagttttaaacgagcgattttgcctcctataattttccccctttctgattttatggtccccatgacatttagtgct------ag 20861559  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | |||||||||||||| ||||| |||||||||||||||||    
T  20861558 ttttttttatcaattattgtgtaccacgtgtgtaattcca 20861519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 15444661 - 15444531
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgatttt-gcccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||  ||||| ||||||||||||| ||| ||||||||||||||||||| |         
T  15444661 gcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctgattttatggtccccatgacatttagtgctggt----- 15444567  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
      |||||||||||||||| |||||||||||||| ||||    
T  15444566 --ttttttatcaattaatatgtgccacgtgtgtgattc 15444531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 25439140 - 25439009
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgccc-ctatag-ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||| |||||||||||||||| |  |          
T  25439140 gcgattttgcaccccatagttttaaacgagcgattttgccctctatagtttccccctttttgattttatggtccccatgacatttagtgttagt------ 25439047  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
     |||||||||||||||||||||| |||||||||| ||||    
T  25439046 -ttttttatcaattaatgtgtgctacgtgtgtaaatcca 25439009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 17431327 - 17431456
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||| |||| |||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||| |         
T  17431327 gcgatttttcacctcatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctggt----- 17431421  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||   |||||||||||||||||||||||    
T  17431422 --ttttttatcaat---tgtgtgccacgtgtgtaattcca 17431456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 16169216 - 16169345
Alignment:
Q  4 attttgcaccccatagttttaaacgagcga-ttttgcccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgt 100  Q
    |||||||||| ||||||||||||||||| | |||| |||||||||  ||| ||||||||||||||| ||| | | ||||||||| ||||| |       |    
T  16169216 attttgcacctcatagttttaaacgagcaatttttccccctatagttttctccctttctgattttatggtcctcgtgacatttaatgctggt-------t 16169308  T
Q  101 tttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||||||| ||||||||||||    
T  16169309 tttttatcaattaatgtgtgccacatgtgtaattcca 16169345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13936762 - 13936800
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13936762 gcgattttgcaccccatatttttaaacgagcgattttgc 13936800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 9623859 - 9623822
Alignment:
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  9623859 ttttttatcaattaatgtgtgccacatgtgtaattcca 9623822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 2856566 - 2856632
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgatttt-gcccctatag--ttccccctttctgattt 64  Q
    |||||||||||||||||||||| |||||  |||||||  |||||||||  |||||||||||||||||    
T  2856566 gcgattttgcaccccatagtttaaaacgttcgattttatcccctatagttttccccctttctgattt 2856632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9822788 - 9822826
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  9822788 gcgattttgcaccccatgtttttaaacgagcgattttgc 9822826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9823375 - 9823337
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  9823375 gcgattttgcaccccatgtttttaaacgagcgattttgc 9823337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13027295 - 13027257
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  13027295 gcgattttgcaccccatgtttttaaacgagcgattttgc 13027257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 15043722 - 15043660
Alignment:
Q  72 cccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    ||||| || ||||||| | |||| ||||||||| || | ||||||||||||||||||||||||    
T  15043722 cccataacttttagtgataatgtatctgtttttgattatttaatgtgtgccacgtgtgtaatt 15043660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39724062 - 39724024
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  39724062 gcgattttgcaccccatgtttttaaacgagcgattttgc 39724024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 2e-50; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 19514566 - 19514706
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  19514566 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatatgtc 19514665  T
Q  98 tgttttt-tatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  19514666 tgtttttgtatcaattaatgtgtgccacgtgtgtaattcca 19514706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 3888675 - 3888540
Alignment:
Q  2 cgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  3888675 cgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttaatgctgatgtgtct 3888576  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||||||||||||||||||||||||| |||||||||    
T  3888575 gttttttatcaattaatgtgtgccacatgtgtaatt 3888540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 3888280 - 3888418
Alignment:
Q  2 cgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  3888280 cgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatgg-tcccatgacatttagtgatgatgtgtct 3888378  T
Q  99 g-ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  3888379 gtttttttatcaattaatgtgtgccacgtgtgtaattcca 3888418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 22729454 - 22729315
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| || ||||||||||||| |||| ||||    
T  22729454 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccctatgacatttagtgttgatatgtc 22729355  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  22729354 tgttttttatcaattaatgtgtgtcacgtgtgtaattcca 22729315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 41072227 - 41072089
Alignment:
Q  2 cgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||  |||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  41072227 cgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttctaattttatggtccccatgacatttagtgctgatgtgtct 41072128  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  41072127 gttttttatcgattaatgtgtgtcacgtgtgtaattcca 41072089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 12498942 - 12498803
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  12498942 gcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctgatgtgtc 12498843  T
Q  98 tgtt---ttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    ||||   |||||||||||||||||||||||||||||||||    
T  12498842 tgtttttttttatcaattaatgtgtgccacgtgtgtaatt 12498803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 26571178 - 26571040
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  |||| |||||||||||||| ||| ||||||||||||||||||||| ||||    
T  26571178 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctcctttctgattttatggtccccatgacatttagtgctgatatgtc 26571079  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  26571078 tg-tttttatcaattaatgtgtgtcacgtgtgtaattcca 26571040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12498607 - 12498736
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  12498607 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtt-ccatgacatttagtgctgatgtgtc 12498705  T
Q  98 tgt-tttttatcaattaatgtgtgccacgtg 127  Q
    ||| |||||||||||||||||||||||||||    
T  12498706 tgtctttttatcaattaatgtgtgccacgtg 12498736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 34147179 - 34147319
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||| ||||||||||||||||||| ||    
T  34147179 gcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccgtgacatttagtgctgatgtatc 34147278  T
Q  98 tg-ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    || ||||||||||||||||||||| ||||||||||||||||    
T  34147279 tgtttttttatcaattaatgtgtgtcacgtgtgtaattcca 34147319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 2817189 - 2817328
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagttc-cccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||| |||||| ||||||||||||||||||||||| |||| ||  |||||||||||||||| ||| |||||||||||||||| ||||||||||    
T  2817189 gcgattttgcatcccataattttaaacgagcgattttgccccctatatttttcccctttctgattttatggtccccatgacatttagtgttgatgtgtct 2817288  T
Q  99 g-ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  2817289 gtttttttatcaattaatgtgtgccacgtgtgtaattcca 2817328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 37780756 - 37780628
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccctatag-ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctg 99  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||            
T  37780756 gcgattttgcacctcattgttttaaacgagcgattttgcccctatagtttccccctttctgattttatggtccccatgacatttagtgctga-------- 37780665  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
     |||||||||||||||||||||||||||||||||||||    
T  37780664 -tttttatcaattaatgtgtgccacgtgtgtaattcca 37780628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 43464206 - 43464075
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| |||||||||||||||||||           
T  43464206 gcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagtgctg------- 43464114  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
     |||||||||||||||||||||||||||||||||||||||    
T  43464113 -gttttttatcaattaatgtgtgccacgtgtgtaattcca 43464075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 2817589 - 2817451
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc-ccctatagttcccc-ctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    |||||||| || || |||||||||||||||||||||||| ||||||| || ||| | |||| |||||| ||| ||||||||||||||| ||||||||| |    
T  2817589 gcgattttacatccaatagttttaaacgagcgattttgctccctataatttccctccttctaattttatggtccccatgacatttagtactgatgtgttt 2817490  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  2817489 gtttttcatcaattaatgtgtgccacgtgtgtaattcca 2817451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 21207266 - 21207398
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||| ||||||||||||||| ||| ||||||||||||||||||| |         
T  21207266 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctgattttatggtccccatgacatttagtgctggt----- 21207360  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||| ||||||||||||||||    
T  21207361 --ttttttatcaattaatgtgtgtcacgtgtgtaattcca 21207398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 26570769 - 26570897
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| |||||||||||||| ||||           
T  26570769 gcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttctgattttatggtccccatgacatttagcgctg------- 26570861  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
     |||||||||||||||||||||||||||| |||||||    
T  26570862 -gttttttatcaattaatgtgtgccacgtttgtaatt 26570897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 34147524 - 34147390
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||| | |||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| ||| ||||||||||   |||||||||    
T  34147524 gcgattttgcacctcgtagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccgtgacatttag---tgatgtgtc 34147428  T
Q  98 tg-ttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    || ||||||||||||||||||||| |||||||||||||    
T  34147427 tgtttttttatcaattaatgtgtgtcacgtgtgtaatt 34147390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 19514977 - 19514848
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||||||  |||||||||| |||||||  ||||||||||||||||| ||||||||||||||||||||||| |         
T  19514977 gcgattttgcaccccatagttttaaacgagttattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctggt----- 19514883  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
      ||||||||||||||||||||| |||||||||||||    
T  19514882 --ttttttatcaattaatgtgtgacacgtgtgtaatt 19514848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 10098559 - 10098684
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccctatagttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgt 100  Q
    ||||||||||| || |||||||||||||||||||||||||||           ||||||||||||| ||| |||||||||||||||| |||| |||||||    
T  10098559 gcgattttgcatcctatagttttaaacgagcgattttgcccc-----------ctttctgattttatggtccccatgacatttagtgatgatatgtctgt 10098647  T
Q  101 tttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||| ||||||||||||||||    
T  10098648 tttttatcaattaatgtgtgtcacgtgtgtaattcca 10098684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 22729047 - 22729174
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||         ||    
T  22729047 gcgattttgcacttcatagttttaaacgagcgattttgcccctatagttttccccctttctgattttatggtccccatgacatttagtg---------ct 22729137  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
    | ||||||||||||||||||||| |||||||||||||    
T  22729138 ggtttttatcaattaatgtgtgctacgtgtgtaattc 22729174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 37610243 - 37610370
Alignment:
Q  3 gattttgcaccccatagttttaaacgagcgattttgcccct-atagttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgtt 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  |||||| ||        || ||||| |||||||||| |||| ||||||||    
T  37610243 gattttgcaccccatagttttaaacgagcgattttgccccttatagttttccctttatg--------gtccccataacatttagtgttgatatgtctgtt 37610334  T
Q  102 ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  37610335 ttttatcaattaatgtgtgtcacgtgtgtaattcca 37610370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 37610632 - 37610503
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag-ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||||          |    
T  37610632 gcgattttgcacctcattgttttaaacgagcgattttgccccctatagtttccccctttctgattttatggtccccatgacatttagtg---------tt 37610542  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | |||||||||||||||||||||||||||||||||||||    
T  37610541 ggtttttatcaattaatgtgtgccacgtgtgtaattcca 37610503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 11316988 - 11316860
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||||  ||||| ||||||||||||| ||| |||||||||||||||||||           
T  11316988 gcgattttgcaccccattgttttaaatgagcgattttgccccctatagttttccctctttctgattttatggtccccatgacatttagtgctg------- 11316896  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
     ||||||||||||||||||| ||||||||||||||||    
T  11316895 -gttttttatcaattaatgtctgccacgtgtgtaatt 11316860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 10098955 - 10098824
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgatttt-gcccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||  ||||| ||||||||||||| ||| ||||||||||||||| ||||          
T  10098955 gcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctgattttatggtccccatgacatttagtactga------ 10098862  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||| ||||||| ||||||||    
T  10098861 --ttttttatcaattaatgtgtgtcacgtgtataattcca 10098824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 25940955 - 25940839
Alignment:
Q  25 aacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgtttttt-atcaattaatgtgtg 120  Q
    |||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||||| || |||||||||| ||| |||||||| |||||||||||||||    
T  25940955 aacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgatatatagtgctgatatgtttgtttttttatcaattaatgtgtg 25940856  T
Q  121 ccacgtgtgtaattcca 137  Q
     ||||||||||||||||    
T  25940855 tcacgtgtgtaattcca 25940839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 137
Target Start/End: Original strand, 37780361 - 37780489
Alignment:
Q  3 gattttgcaccccatagttttaaacgagcgattttgcccc-tatagttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgtt 101  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  |||||| ||        || ||||| |||||||||| |||| ||||||||    
T  37780361 gattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctttatg--------gtccccataacatttagtgttgatatgtctgtt 37780452  T
Q  102 tt-ttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    || ||||||||||||||||| ||||||||||||||||    
T  37780453 tttttatcaattaatgtgtgtcacgtgtgtaattcca 37780489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 43463795 - 43463935
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctg---------attttagggttcccatgacatttagtgc 88  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||| |||||||||         |||||| ||| |||||||||||||||||    
T  43463795 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctgattttaattattttatggtccccatgacatttagtgc 43463894  T
Q  89 tgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||        |||||||||||||||||||||||||||||||||||||||    
T  43463895 tg--------gttttttatcaattaatgtgtgccacgtgtgtaattcca 43463935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 30401925 - 30402056
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttg-cccctat-agttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgtt 101  Q
    |||||||| ||||||||||||||| |||||||||| ||||||| | || ||||||| |||||||| ||| ||||||| |||||||| ||    || | ||    
T  30401925 attttgcatcccatagttttaaactagcgattttgccccctataattttcccctttatgattttatggtccccatgatatttagtgttg----gtttttt 30402020  T
Q  102 ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30402021 ttttatcaattaatgtgtgtcacgtgtgtaattcca 30402056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 25940561 - 25940697
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcc----catgacatttagtgctgatg 93  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||  ||| ||||||||||||||| ||| ||    ||||||||||||| ||| |     
T  25940561 gcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttcaccctttctgattttatggtccccatgcatgacatttagtactggt- 25940659  T
Q  94 tgtctgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
          |||||||||||||||||| ||||||||||||| |||||    
T  25940660 ------ttttttatcaattaatgtatgccacgtgtgtacttcca 25940697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25941028 - 25940959
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatagtt---ccccctttctgatttta 66  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||   |||||||||||||||||    
T  25941028 gcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccccctttctgatttta 25940959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 41072048 - 41072004
Alignment:
Q  178 ggtagctttgagttttgtgtgccacgtgcctccttctctcaaaat 222  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  41072048 ggtagctttgagtttcgtgtgccacgtgcctccttctctcaaaat 41072004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11351441 - 11351405
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgatttt 37  Q
    |||||||||||||||||| ||||||||||||||||||    
T  11351441 gcgattttgcaccccatatttttaaacgagcgatttt 11351405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 2817372 - 2817415
Alignment:
Q  179 gtagctttgagttttgtgtgccacgtgcctccttctctcaaaat 222  Q
    |||||||||||||| |||||||| |||||| |||||||||||||    
T  2817372 gtagctttgagtttcgtgtgccatgtgcctacttctctcaaaat 2817415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 11350850 - 11350885
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgc 39  Q
    ||||||||||||||| ||||||||||||||||||||    
T  11350850 attttgcaccccatatttttaaacgagcgattttgc 11350885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18816992 - 18817030
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  18816992 gcgattttgcaccccatgtttttaaacgagcgattttgc 18817030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18817625 - 18817587
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  18817625 gcgattttgcaccccatgtttttaaacgagcgattttgc 18817587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 2e-50; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 3353565 - 3353425
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt-ccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  3353565 gcgattttgcacctcatagttttaaacgagcgattttgccccctatagtttccccctttctgattttatggtccccatgacatttagtgctgatgtgtct 3353466  T
Q  99 gtt--ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||  ||||||||||||||||||||||||||||||||||||    
T  3353465 gttttttttatcaattaatgtgtgccacgtgtgtaattcca 3353425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 22429610 - 22429471
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  22429610 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatggtccccatgacatttagtgctgatatgtc 22429511  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  22429510 tgttttttatcaattaatgtgtgtcacgtgtgtaattcca 22429471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 47666346 - 47666210
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgt 100  Q
    |||||||||||||| |||| ||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  47666346 attttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgacatttagtgctgatgtgtgtgt 47666247  T
Q  101 tttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | |||||||||||||||||||||||||||||||||||    
T  47666246 tatttatcaattaatgtgtgccacgtgtgtaattcca 47666210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 27238505 - 27238644
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| |||||||| |||||||||||| ||||    
T  27238505 gcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacttttagtgctgatatgtc 27238604  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  27238605 tgttttttatcaattaatgtgtgccatgtgtgtaattcca 27238644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 3353167 - 3353304
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||  ||||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  3353167 gcgattttgcaccccatagttttaaacgagcgatttc-cccctatagttttccccctttctgattttatggtccccatgacatttagtactgatgtgtct 3353265  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  3353266 gttttttatcaattaatgtgtgccctgtgtgtaattcca 3353304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 26007221 - 26007358
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgccc-ctatagttcccc--ctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||  ||||||||||||| ||| ||||||||||||||||||||| | ||    
T  26007221 gcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttccatctttctgattttatggtccccatgacatttagtgctgatatatc 26007320  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26007321 tgttttttatcaattaatgtgtgccacgtgtgtaattc 26007358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 36180594 - 36180733
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| ||| |||||||||||||||| |||| ||||    
T  36180594 gcgattttgcatcccatagttttaaacgagcgattttgacccctatagttttccccctttctgattttatggtccccatgacatttagtgttgatatgtc 36180693  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  36180694 tgttttttatcaattaacgtgtgtcacgtgtgtaattcca 36180733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 40848975 - 40848836
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||  | ||||||||||||||| ||| |||||||||||||||| |||| || |    
T  40848975 gcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttcaccctttctgattttatggtccccatgacatttagtgttgatatgcc 40848876  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40848875 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 40848836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 42673017 - 42673153
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||  |||||||| |||||||| ||  ||||||||||||||||||||| ||||    
T  42673017 gcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctttatgattttatggcccccatgacatttagtgctgatatgtc 42673116  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
     ||||||||||||||||||||||||||||||||||||    
T  42673117 cgttttttatcaattaatgtgtgccacgtgtgtaatt 42673153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 44008022 - 44008146
Alignment:
Q  16 atagttttaaacgagcgattttgcccc-tatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatcaatt 112  Q
    ||||||||||||||||||||||||||| |||||||   |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  44008022 atagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatggttcccatgacatttagtgctgatatgtctgttttttatcaatt 44008121  T
Q  113 aatgtgtgccacgtgtgtaattcca 137  Q
    |||||||| ||||||||||||||||    
T  44008122 aatgtgtgtcacgtgtgtaattcca 44008146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 48160347 - 48160208
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||   |||||||||||||||| | | |||||||||||||||| | || | ||    
T  48160347 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatgatccccatgacatttagtgttaatttttc 48160248  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48160247 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 48160208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 53687928 - 53688066
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||  ||||||||||||||||| ||| |||||||||||||| | |||||||||    
T  53687928 gcgattttgcaccccatagttttaaacgagcgattttaccccctatagttttccccctttctgattttatggtccccatgacatttagcgttgatgtgtc 53688027  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    || |||||||||||||| ||||||||||||||||||||||    
T  53688028 tg-tttttatcaattaacgtgtgccacgtgtgtaattcca 53688066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 27238914 - 27238783
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc-ccctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||||||           
T  27238914 gcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttccccctttctgattttatggttcccatgacatttagtgctg------- 27238822  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
     |||||||||||||||||||||||||||||||||||||||    
T  27238821 -gttttttatcaattaatgtgtgccacgtgtgtaattcca 27238783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 53688317 - 53688178
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||| ||||||||| ||||||||||||||||||| |||||||  ||||||||||||||||| | ||| |||||||||||||| |||| ||||    
T  53688317 gcgattttgcactccatagtttaaaacgagcgattttgccccctatagttttccccctttctgattttatgattctcatgacatttagtgttgatatgtc 53688218  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  53688217 tgttatttatcaattaatgtgtgccacatgtgtaattcca 53688178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 40848560 - 40848695
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| |||||||||||||| ||||    ||     
T  40848560 gcgattttacaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgacatttagcgctg----gtt 40848655  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  40848656 ttttttttatcaattaatgtgtgccacgtgtgtaattcca 40848695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 42456209 - 42456076
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag-ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||| |||||||||||||||| || |     |    
T  42456209 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttccccctttctgattttatggtccccatgacatttagtgatggt-----t 42456115  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
     |||||||| |||||||||||||||||||||||||||||    
T  42456114 tttttttataaattaatgtgtgccacgtgtgtaattcca 42456076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 24485061 - 24485192
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||  || |||||||||||||||| ||| ||||||||||||||||||||          
T  24485061 gcgattttgcaccccatagttttaaacgagcgatttcgccccctatagtttttcccctttctgattttatggtccccatgacatttagtgctga------ 24485154  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||||||||||||||||||||    
T  24485155 --ttttttatcaattaatgtgtgccacgtgtgtaattcca 24485192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 22429198 - 22429330
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||||||||  ||||||||||||||||| ||| |||||||||||||||||||||         
T  22429198 gcgactttgcacccaatagttttaaacgagcgattttgtcccctatagttttccccctttctgattttatggtccccatgacatttagtgctgat----- 22429292  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||||||| ||||||||||||    
T  22429293 --ttttttatcaattaatgtgtgccacatgtgtaattcca 22429330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 47665951 - 47666088
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcc-cctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||| ||| |||| ||||||| |||||| || |||||||||  |||||||| |||||||| ||||| |||||||||||||| |||||||||    
T  47665951 gcgattttgcacctcattgtttaaaacgagtgattttaccacctatagttttccccctttttgattttatggttctcatgacatttagtggtgatgtgtc 47666050  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
    | || |||||||||||||||||||||||||||||||||    
T  47666051 tattatttatcaattaatgtgtgccacgtgtgtaattc 47666088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 10348522 - 10348656
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttg-cccctatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtctg- 99  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||||   ||||||||||||||||  || ||||||||||||||||||||| ||||||     
T  10348522 attttgcatcccataattttaaacgagcgattttgtcccctatagtttttcccctttctgattttatagtccccatgacatttagtgctgatatgtctgt 10348621  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    |||||||| ||||||| ||||||||||||||||||    
T  10348622 ttttttattaattaatatgtgccacgtgtgtaatt 10348656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 10348813 - 10348681
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||| |||||| ||| ||| ||||||||||||||| |         
T  10348813 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctaattttatggtccccgtgacatttagtgctggt----- 10348719  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||| ||||||||||||||||||||||||    
T  10348718 --ttttttatcaattcatgtgtgccacgtgtgtaattcca 10348681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 42673310 - 42673178
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| ||||| | |||||||| || |         
T  42673310 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatcagatttagtgttggt----- 42673216  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||||||||||||||||||||||||||||||||||    
T  42673215 --ttttttatcaattaatgtgtgccacgtgtgtaattcca 42673178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 53766552 - 53766466
Alignment:
Q  51 cccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  53766552 cccctttctgattttatggtccccatgacatttagtgctgatatgtctgttttttatcaattaatatgtgccacgtgtgtaattcca 53766466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 24485474 - 24485331
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||| |||||| ||| ||||||||| ||||||||||| |||     
T  24485474 gcgattttgcaccccatagttttaaatgagcgattttgccccctatagtattccccctttctaattttatggtccccatgaca-ttagtgctgatatgtt 24485376  T
Q  98 tg-----ttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||     |||||||||||||||||||| |||||||||||||||||    
T  24485375 tgttttcttttttatcaattaatgtgtaccacgtgtgtaattcca 24485331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 26007632 - 26007502
Alignment:
Q  2 cgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    |||||||||||  |||| ||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||| |||||||||||||            
T  26007632 cgattttgcacttcataattttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccataacatttagtgctg-------- 26007541  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26007540 gttttttatcaattaatgtgtgccacgtgtgtaattcca 26007502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 48159937 - 48160070
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| | | ||| ||||||||||      |||       
T  48159937 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatgatccccgtgacatttag------tgttag 48160030  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  48160031 ttttttttatcaattaatgtgtgccacgtgtgtaattcca 48160070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 53766203 - 53766331
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatag-ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||| |||||||| |||  |||||||||||||||||||           
T  53766203 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttccccatttttgattttatggtctccatgacatttagtgctga------- 53766295  T
Q  99 gttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      ||||||| |||||||||||||||||||||||||||||    
T  53766296 --tttttat-aattaatgtgtgccacgtgtgtaattcca 53766331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 36181004 - 36180872
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcga-ttttgcccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||| ||||||||||||||||||||||| |||| |||||||||  || ||| |||||||||||| | | ||||||||||||||||||| |         
T  36181004 gcgattttgtaccccatagttttaaacgagcgattttttcccctatagtttttcccttttctgattttatgatccccatgacatttagtgctggt----- 36180910  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
      |||||||||||||||||||| |||||||||||||||||    
T  36180909 --ttttttatcaattaatgtgtaccacgtgtgtaattcca 36180872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 42455859 - 42455945
Alignment:
Q  48 ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaatt 134  Q
    ||||||||||||||||||| ||| |||||||| ||||||| |||| | ||||||||||||||||||||||||| |||||||||||||    
T  42455859 ttccccctttctgattttatggtccccatgacgtttagtgatgatatatctgttttttatcaattaatgtgtgtcacgtgtgtaatt 42455945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 137
Target Start/End: Complemental strand, 44008412 - 44008283
Alignment:
Q  4 attttgcaccccatagttttaaacgagcga-ttttgcccctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgt 100  Q
    |||||||||| ||||||||||||||||| | |||| |||||||||  ||| ||||||||||||||| ||| | | ||||||||| ||||| |       |    
T  44008412 attttgcacctcatagttttaaacgagcaatttttccccctatagttttctccctttctgattttatggtcctcgtgacatttaatgctggt-------t 44008320  T
Q  101 tttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||||||| ||||||||||||    
T  44008319 tttttatcaattaatgtgtgccacatgtgtaattcca 44008283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 21895722 - 21895807
Alignment:
Q  51 cccctttctgattttagggttccc-atgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
    |||||||||||||||| ||| ||| ||||||||||||| ||||||||| |||||| |||| ||||||| || ||||||||||||||    
T  21895722 cccctttctgattttatggtcccccatgacatttagtgatgatgtgtcggtttttgatcatttaatgtatgtcacgtgtgtaattc 21895807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 21896525 - 21896390
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc-ccctatagttc--cccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||||||||| |||||| |||||||||||||| ||| ||  ||   ||| ||| |||||||| ||| ||  ||| |||||||| |||||||||    
T  21896525 gcgattttgcaccccatggttttatacgagcgattttgcaccccatcatttttcccatttttgattttatggtccc--tgatatttagtgatgatgtgtc 21896428  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
     |||||| |||| ||||||||||||||||||| |||||    
T  21896427 ggtttttgatcatttaatgtgtgccacgtgtgcaattc 21896390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 3353346 - 3353390
Alignment:
Q  178 ggtagctttgagttttgtgtgccacgtgcctccttctctcaaaat 222  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||    
T  3353346 ggtagctttgagtttcgtgtgccacatgcctccttctctcaaaat 3353390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 38291 - 38428
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||| |||||||||||||| ||||||||||||||| |||||||  ||| ||||||||||||| ||| ||||||||||||||||||||| ||||    
T  38291 gcgattttgcatcccatagttttaaatgagcgattttgccccctatagttttccctctttctgattttatggtccccatgacatttagtgctgatatgtc 38390  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38391 tgttttttatcaattaatgtgtgccacgtgtgtaattc 38428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 38709 - 38570
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||| |||||||| |||||||||||| |||||||  |||||||||||||||||  ||  |||||||||||||||||||| |||     
T  38709 gcgattttgcaccccatagtcttaaacgaacgattttgccccctatagttttccccctttctgattttatagtctccatgacatttagtgctgatatgtg 38610  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  38609 tgttttttattaattaatgtgtgccacatgtgtaattcca 38570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 93; Significance: 5e-45; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 185288 - 185149
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||  ||| ||||||||||||| ||| |||||||||||||||||| || ||||    
T  185288 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctctttctgattttatggtccccatgacatttagtgctaatatgtc 185189  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  185188 tgttttttatcaattaatgtgtgccacatatgtaattcca 185149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 184882 - 185011
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcc-cctatag--ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgt 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| ||| ||||||||||||||||||| |       |    
T  184882 attttgcaccccatagttttaaacgagcgattttgccacctatagttttccccctttctgattttatggtccccatgacatttagtgctggt-------t 184974  T
Q  101 tttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||| |||||| |||||||||||||||||    
T  184975 tttttatcaattcatgtgtcccacgtgtgtaattcca 185011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 370 - 509
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||  |||| |||||||||||| ||| ||| ||||||||||||||||| |||     
T  370 gcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccgtgacatttagtgctgatatgtt 469  T
Q  98 tgttttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  470 tgttttttatcaattaatgtgtgtcacgtgtgtaattcca 509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 777 - 649
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccctatag-ttccccctttctgattttagggttcccatgacatttagtgctgatgtgtctg 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| || | | |||||||||||| ||| ||||||||||||| |||||||           
T  777 gcgattttgcaccccataattttaaacgagcgattttgcccctatagttttctcatttctgattttatggtccccatgacatttaatgctgat------- 685  T
Q  100 ttttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
    ||||||||  ||||||||||||||||||||| ||||    
T  684 ttttttatgcattaatgtgtgccacgtgtgtgattc 649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 86; Significance: 7e-41; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 9957 - 10085
Alignment:
Q  12 ccccatagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatc 108  Q
    ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| ||||| |||||||||| |||| |||||||||||||||    
T  9957 ccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccataacatttagtgttgatatgtctgttttttatc 10056  T
Q  109 aattaatgtgtgccacgtgtgtaattcca 137  Q
    ||| |||||||||||||||||||||||||    
T  10057 aatcaatgtgtgccacgtgtgtaattcca 10085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 10332 - 10223
Alignment:
Q  31 cgattttgc-ccctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtctgttttttatcaattaatgtgtgccacgtg 127  Q
    ||||||||| ||||||||||  ||||||||||||||||| ||| ||||| |||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  10332 cgattttgcaccctatagttttccccctttctgattttatggtccccataacatttagtgttgatatgtctgttttttatcaatcaatgtgtgccacgtg 10233  T
Q  128 tgtaattcca 137  Q
    ||||||||||    
T  10232 tgtaattcca 10223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 50116 - 50249
Alignment:
Q  4 attttgcaccccatagttttaaacgagcgattttgcccc-tatagttc-cccctttctgattttagggttcccatgacatttagtgctgatgtgtctgtt 101  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||  |||||||||||||||| ||| || |||||||||||||||||| ||||||||    
T  50116 attttgcaccccatagttttaaacgagcgattttgccccctgtagttttcccctttctgattttatggtccctatgacatttagtgctgatatgtctgtt 50215  T
Q  102 ttttatcaattaatgtgtgccacgtgtgtaattcca 137  Q
    |||||||||||||||||||  |||||||||||||||    
T  50216 ttttatcaattaatgtgtg--acgtgtgtaattcca 50249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 50521 - 50426
Alignment:
Q  1 gcgattttgcacccc-atagttttaaacgagcgattttgcccc-tatagtt--ccccctttctgattttagggttcccatgacatttagtgctgat 92  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |||||||  ||||||||||||||||| ||| ||||||||||||| |||||||    
T  50521 gcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttaccccctttctgattttatggtccccatgacatttaatgctgat 50426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 66; Significance: 6e-29; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 20057 - 19920
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgcccc-tatagtt-ccccctttctgattttagggttcccatgacatttagtgctgatgtgtct 98  Q
    |||||||||| ||||||||||||||||   |||||||||||| ||||||| |||||||| |||||||| ||| || ||||||||||||| |||| |||||    
T  20057 gcgattttgccccccatagttttaaactgacgattttgccccctatagtttccccctttttgattttatggtccctatgacatttagtgttgatatgtct 19958  T
Q  99 gtt-ttttatcaattaatgtgtgccacgtgtgtaattc 135  Q
    ||| ||||||||||||||||||| ||| ||||||||||    
T  19957 gtttttttatcaattaatgtgtgtcacctgtgtaattc 19920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 19660 - 19778
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttg-cccctatagtt--ccccctttctgattttagggttcccatgacatttagtgctgatgtgtc 97  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||| |||||| ||| ||||||||||||| |||||           
T  19660 gcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttctcccctttctaattttatggtccccatgacatttaatgctg------g 19753  T
Q  98 tgttttttatcaattaatgtgtgcc 122  Q
    | |||||||||||||||||||||||    
T  19754 ttttttttatcaattaatgtgtgcc 19778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6809 - 6771
Alignment:
Q  1 gcgattttgcaccccatagttttaaacgagcgattttgc 39  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  6809 gcgattttgcaccccatgtttttaaacgagcgattttgc 6771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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