View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3804_low_19 (Length: 453)

Name: NF3804_low_19
Description: NF3804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3804_low_19
NF3804_low_19
[»] chr2 (66 HSPs)
chr2 (17-453)||(37719813-37720250)
chr2 (38-153)||(28898034-28898149)
chr2 (35-153)||(42182957-42183075)
chr2 (44-153)||(1110266-1110375)
chr2 (32-153)||(37228567-37228688)
chr2 (33-153)||(15508982-15509102)
chr2 (39-153)||(4964671-4964785)
chr2 (38-107)||(42182889-42182958)
chr2 (35-107)||(4964784-4964856)
chr2 (35-107)||(28898148-28898220)
chr2 (33-120)||(27968913-27969000)
chr2 (33-120)||(28091587-28091674)
chr2 (33-120)||(28101819-28101906)
chr2 (33-120)||(20951601-20951686)
chr2 (33-120)||(37398806-37398893)
chr2 (242-341)||(24727821-24727920)
chr2 (32-153)||(6315726-6315847)
chr2 (64-153)||(31395468-31395557)
chr2 (38-107)||(45554567-45554636)
chr2 (39-107)||(1107039-1107107)
chr2 (39-103)||(6980235-6980299)
chr2 (35-107)||(31395556-31395628)
chr2 (39-99)||(37228499-37228559)
chr2 (32-107)||(1110192-1110267)
chr2 (65-147)||(24895291-24895373)
chr2 (35-104)||(11539420-11539489)
chr2 (35-104)||(40535104-40535173)
chr2 (35-107)||(15508911-15508983)
chr2 (35-107)||(18511320-18511392)
chr2 (35-107)||(26767872-26767944)
chr2 (74-153)||(33746953-33747032)
chr2 (400-453)||(8851140-8851194)
chr2 (68-150)||(21447175-21447257)
chr2 (66-107)||(9470109-9470150)
chr2 (37-93)||(10339767-10339821)
chr2 (34-107)||(41805887-41805960)
chr2 (35-107)||(12989188-12989260)
chr2 (407-453)||(5378660-5378707)
chr2 (32-107)||(44274229-44274303)
chr2 (408-453)||(17850978-17851024)
chr2 (33-106)||(19427359-19427430)
chr2 (65-106)||(17188092-17188133)
chr2 (33-102)||(26767754-26767823)
chr2 (39-107)||(3804585-3804653)
chr2 (410-453)||(6325355-6325399)
chr2 (406-453)||(8851590-8851638)
chr2 (409-453)||(16911277-16911321)
chr2 (64-104)||(42579771-42579811)
chr2 (407-453)||(5379967-5380014)
chr2 (66-153)||(38104316-38104403)
chr2 (407-453)||(41790920-41790967)
chr2 (408-453)||(16910827-16910873)
chr2 (411-453)||(19141857-19141898)
chr2 (67-101)||(30718443-30718477)
chr2 (411-453)||(41790494-41790536)
chr2 (420-453)||(6324930-6324963)
chr2 (46-103)||(8009521-8009578)
chr2 (41-102)||(12989309-12989370)
chr2 (408-453)||(38490849-38490894)
chr2 (406-453)||(5793445-5793493)
chr2 (39-107)||(16719541-16719609)
chr2 (406-453)||(20347472-20347520)
chr2 (35-107)||(23463937-23464009)
chr2 (379-407)||(24727930-24727958)
chr2 (35-107)||(33678226-33678298)
chr2 (33-153)||(44274302-44274421)
[»] chr5 (56 HSPs)
chr5 (242-407)||(31148328-31148493)
chr5 (31-153)||(42224581-42224703)
chr5 (35-153)||(17568696-17568814)
chr5 (33-153)||(24915123-24915241)
chr5 (33-153)||(24990954-24991072)
chr5 (35-153)||(26072171-26072289)
chr5 (39-140)||(34818267-34818368)
chr5 (35-153)||(4959346-4959464)
chr5 (35-107)||(42224702-42224774)
chr5 (44-149)||(13456170-13456273)
chr5 (35-153)||(8912578-8912698)
chr5 (33-153)||(32050375-32050495)
chr5 (35-107)||(40971564-40971636)
chr5 (35-153)||(6263951-6264067)
chr5 (33-107)||(4959273-4959347)
chr5 (35-153)||(40971447-40971565)
chr5 (38-107)||(30325985-30326054)
chr5 (33-103)||(28490837-28490907)
chr5 (33-107)||(31542354-31542428)
chr5 (32-102)||(34368478-34368548)
chr5 (34-91)||(2443682-2443739)
chr5 (35-107)||(13456276-13456346)
chr5 (36-104)||(6263881-6263949)
chr5 (402-453)||(12498936-12498988)
chr5 (407-453)||(12498566-12498613)
chr5 (41-104)||(17568816-17568879)
chr5 (407-453)||(26571172-26571219)
chr5 (64-107)||(27592563-27592606)
chr5 (33-92)||(28611771-28611830)
chr5 (34-95)||(28611901-28611962)
chr5 (35-107)||(34368357-34368429)
chr5 (34-107)||(39246604-39246677)
chr5 (406-453)||(19514971-19515019)
chr5 (35-107)||(32309477-32309549)
chr5 (68-107)||(10142087-10142126)
chr5 (64-107)||(17537213-17537256)
chr5 (411-453)||(21207229-21207272)
chr5 (372-407)||(36219754-36219789)
chr5 (406-453)||(37610200-37610247)
chr5 (406-453)||(37780318-37780365)
chr5 (406-453)||(43463754-43463801)
chr5 (33-107)||(1649545-1649619)
chr5 (276-338)||(4301939-4302001)
chr5 (77-107)||(5413848-5413878)
chr5 (41-107)||(26072106-26072172)
chr5 (76-150)||(27726833-27726907)
chr5 (32-102)||(41105562-41105632)
chr5 (407-453)||(43464200-43464246)
chr5 (408-453)||(37610626-37610671)
chr5 (406-453)||(2817147-2817195)
chr5 (62-107)||(14553520-14553567)
chr5 (408-453)||(19514525-19514572)
chr5 (409-453)||(22729448-22729492)
chr5 (71-107)||(28155811-28155847)
chr5 (67-150)||(31542268-31542352)
chr5 (406-453)||(34147518-34147566)
[»] chr3 (69 HSPs)
chr3 (285-407)||(5353544-5353666)
chr3 (44-153)||(24748913-24749022)
chr3 (35-153)||(37600124-37600242)
chr3 (276-407)||(32994959-32995090)
chr3 (35-153)||(10769719-10769837)
chr3 (35-153)||(54140887-54141005)
chr3 (35-135)||(29775136-29775234)
chr3 (33-134)||(38928001-38928102)
chr3 (32-107)||(37600241-37600316)
chr3 (35-152)||(27243114-27243231)
chr3 (35-107)||(28529250-28529322)
chr3 (85-153)||(46237090-46237158)
chr3 (44-107)||(46237157-46237220)
chr3 (68-146)||(357835-357913)
chr3 (35-105)||(27243042-27243112)
chr3 (34-107)||(20493556-20493629)
chr3 (64-153)||(44844049-44844138)
chr3 (35-107)||(10769836-10769908)
chr3 (33-104)||(46160944-46161013)
chr3 (55-107)||(54141004-54141056)
chr3 (38-107)||(20791296-20791365)
chr3 (35-107)||(5452171-5452243)
chr3 (33-153)||(13809149-13809269)
chr3 (35-107)||(21232633-21232705)
chr3 (35-107)||(37776814-37776886)
chr3 (31-107)||(38928120-38928196)
chr3 (35-103)||(52951475-52951543)
chr3 (406-453)||(26007180-26007227)
chr3 (64-107)||(26310557-26310600)
chr3 (58-107)||(43657107-43657156)
chr3 (35-107)||(46450064-46450134)
chr3 (83-152)||(50661564-50661633)
chr3 (405-453)||(40848518-40848566)
chr3 (33-153)||(41451888-41452007)
chr3 (31-107)||(52124067-52124143)
chr3 (68-107)||(138793-138832)
chr3 (34-153)||(24734773-24734891)
chr3 (56-107)||(41707550-41707601)
chr3 (276-347)||(44064223-44064294)
chr3 (407-453)||(48159896-48159943)
chr3 (33-103)||(24734700-24734770)
chr3 (38-107)||(29389124-29389193)
chr3 (408-453)||(42672978-42673023)
chr3 (405-453)||(53687885-53687934)
chr3 (408-453)||(53688311-53688356)
chr3 (64-104)||(14236045-14236085)
chr3 (35-103)||(41452010-41452078)
chr3 (38-106)||(52951376-52951444)
chr3 (407-453)||(40848969-40849016)
chr3 (407-453)||(42455789-42455836)
chr3 (31-146)||(42780663-42780778)
chr3 (64-107)||(45515606-45515649)
chr3 (407-453)||(8315090-8315136)
chr3 (33-107)||(13809077-13809150)
chr3 (38-107)||(30624633-30624700)
chr3 (33-107)||(46575943-46576017)
chr3 (408-453)||(47666343-47666389)
chr3 (408-453)||(48160341-48160387)
chr3 (39-153)||(52123955-52124068)
chr3 (408-453)||(3353128-3353173)
chr3 (408-453)||(24485468-24485513)
chr3 (31-92)||(29388585-29388646)
chr3 (64-109)||(39185263-39185308)
chr3 (408-453)||(42673304-42673349)
chr3 (40-105)||(50661635-50661700)
chr3 (64-100)||(13639428-13639464)
chr3 (39-107)||(40715973-40716041)
chr3 (85-153)||(43657040-43657108)
chr3 (39-99)||(50320534-50320594)
[»] chr8 (58 HSPs)
chr8 (278-407)||(7423522-7423651)
chr8 (281-407)||(25877491-25877617)
chr8 (35-153)||(13407318-13407436)
chr8 (35-153)||(35689548-35689666)
chr8 (64-152)||(33417751-33417839)
chr8 (57-153)||(1205895-1205991)
chr8 (39-107)||(32072098-32072166)
chr8 (55-107)||(35689497-35689549)
chr8 (34-153)||(34303431-34303550)
chr8 (35-153)||(6387629-6387747)
chr8 (39-153)||(28211885-28211998)
chr8 (34-107)||(7599533-7599606)
chr8 (42-149)||(7599423-7599530)
chr8 (33-107)||(1977284-1977358)
chr8 (33-107)||(8914766-8914840)
chr8 (34-147)||(23142811-23142921)
chr8 (38-107)||(23685131-23685200)
chr8 (40-91)||(1205829-1205880)
chr8 (68-107)||(34861298-34861337)
chr8 (39-105)||(9952870-9952936)
chr8 (42-146)||(12212126-12212230)
chr8 (42-146)||(12456554-12456658)
chr8 (35-107)||(13856506-13856578)
chr8 (406-453)||(41662519-41662567)
chr8 (34-107)||(6387559-6387630)
chr8 (33-107)||(31301110-31301184)
chr8 (408-453)||(37397153-37397199)
chr8 (38-107)||(28413980-28414049)
chr8 (64-109)||(44709297-44709342)
chr8 (34-102)||(16983390-16983458)
chr8 (34-102)||(16983512-16983580)
chr8 (406-453)||(17431285-17431333)
chr8 (64-104)||(17499347-17499387)
chr8 (410-453)||(25438794-25438838)
chr8 (35-107)||(35151840-35151912)
chr8 (402-453)||(37396702-37396754)
chr8 (36-107)||(5979878-5979949)
chr8 (57-104)||(23142937-23142984)
chr8 (37-104)||(31691625-31691692)
chr8 (407-453)||(34498563-34498610)
chr8 (64-107)||(45246460-45246503)
chr8 (33-107)||(13407435-13407509)
chr8 (64-106)||(25915146-25915188)
chr8 (69-107)||(35797426-35797464)
chr8 (33-83)||(38091488-38091538)
chr8 (64-109)||(16441830-16441875)
chr8 (401-453)||(20861646-20861699)
chr8 (100-153)||(43026359-43026412)
chr8 (68-105)||(45218630-45218667)
chr8 (402-453)||(6199104-6199156)
chr8 (406-453)||(12281122-12281170)
chr8 (34-106)||(16441919-16441991)
chr8 (34-153)||(17499229-17499345)
chr8 (406-453)||(24473776-24473824)
chr8 (67-107)||(39023459-39023499)
chr8 (35-107)||(41727427-41727499)
chr8 (32-107)||(43026287-43026360)
chr8 (32-107)||(43506532-43506604)
[»] chr6 (37 HSPs)
chr6 (242-407)||(279545-279710)
chr6 (35-153)||(19090209-19090327)
chr6 (33-153)||(10060927-10061047)
chr6 (37-140)||(19737431-19737534)
chr6 (31-107)||(19090326-19090402)
chr6 (34-107)||(6531409-6531482)
chr6 (38-153)||(35128724-35128835)
chr6 (34-107)||(373395-373468)
chr6 (67-125)||(9940387-9940445)
chr6 (57-107)||(19737546-19737596)
chr6 (41-107)||(35128834-35128900)
chr6 (64-153)||(373467-373556)
chr6 (38-107)||(21987292-21987361)
chr6 (34-107)||(34905332-34905405)
chr6 (39-134)||(4595829-4595922)
chr6 (35-107)||(445815-445887)
chr6 (64-107)||(4595768-4595811)
chr6 (74-153)||(6992304-6992383)
chr6 (31-102)||(8441953-8442024)
chr6 (31-102)||(8450757-8450828)
chr6 (35-102)||(17226645-17226712)
chr6 (406-453)||(29074380-29074427)
chr6 (406-453)||(29079144-29079191)
chr6 (406-453)||(29106953-29107000)
chr6 (56-107)||(31116235-31116286)
chr6 (33-107)||(10060854-10060928)
chr6 (408-453)||(33974307-33974353)
chr6 (406-453)||(7654556-7654604)
chr6 (77-149)||(12794850-12794922)
chr6 (64-107)||(12327316-12327359)
chr6 (31-106)||(12488156-12488231)
chr6 (408-453)||(10087866-10087912)
chr6 (31-153)||(34905404-34905525)
chr6 (35-100)||(12753878-12753943)
chr6 (408-453)||(22684366-22684411)
chr6 (408-453)||(22754657-22754702)
chr6 (64-100)||(10133276-10133312)
[»] chr4 (78 HSPs)
chr4 (242-407)||(42545446-42545611)
chr4 (244-383)||(36513999-36514138)
chr4 (34-153)||(44832531-44832650)
chr4 (36-153)||(51206111-51206228)
chr4 (276-407)||(54117051-54117182)
chr4 (64-153)||(16178651-16178740)
chr4 (33-153)||(39016731-39016851)
chr4 (34-153)||(42862414-42862533)
chr4 (281-407)||(25891865-25891991)
chr4 (35-153)||(13070008-13070126)
chr4 (33-153)||(37315628-37315748)
chr4 (32-152)||(2187805-2187924)
chr4 (36-104)||(47237855-47237923)
chr4 (39-153)||(30866930-30867044)
chr4 (34-104)||(40812033-40812103)
chr4 (34-107)||(42862532-42862605)
chr4 (39-107)||(8108957-8109025)
chr4 (35-107)||(13069938-13070009)
chr4 (32-107)||(34129511-34129586)
chr4 (33-104)||(40991703-40991774)
chr4 (302-369)||(54713027-54713094)
chr4 (33-107)||(39016658-39016732)
chr4 (33-107)||(50571859-50571933)
chr4 (38-107)||(43771126-43771195)
chr4 (405-453)||(26207358-26207406)
chr4 (35-107)||(44832460-44832532)
chr4 (34-153)||(24938409-24938527)
chr4 (39-107)||(37315564-37315629)
chr4 (67-153)||(47237767-47237853)
chr4 (43-107)||(20454545-20454609)
chr4 (406-453)||(26207754-26207802)
chr4 (406-453)||(28196781-28196829)
chr4 (55-107)||(30867043-30867095)
chr4 (35-107)||(50164392-50164464)
chr4 (64-103)||(722183-722222)
chr4 (407-453)||(9380749-9380796)
chr4 (35-101)||(20225458-20225522)
chr4 (368-407)||(54713243-54713282)
chr4 (55-105)||(2187926-2187976)
chr4 (408-453)||(9380307-9380353)
chr4 (42-92)||(20454666-20454716)
chr4 (56-106)||(22592322-22592372)
chr4 (407-453)||(23539840-23539885)
chr4 (408-453)||(32703658-32703704)
chr4 (76-153)||(2088700-2088777)
chr4 (409-453)||(25161879-25161924)
chr4 (71-104)||(29699522-29699555)
chr4 (406-453)||(9023688-9023736)
chr4 (55-107)||(16178601-16178652)
chr4 (55-107)||(21776956-21777008)
chr4 (402-453)||(28196340-28196392)
chr4 (31-107)||(33653600-33653676)
chr4 (74-146)||(40812112-40812184)
chr4 (407-453)||(292781-292828)
chr4 (44-107)||(2088776-2088839)
chr4 (407-453)||(9023243-9023290)
chr4 (406-452)||(32703223-32703270)
chr4 (407-453)||(39744473-39744520)
chr4 (67-126)||(49738950-49739009)
chr4 (408-453)||(169447-169493)
chr4 (408-453)||(4239374-4239420)
chr4 (35-153)||(24834646-24834763)
chr4 (33-99)||(37306399-37306465)
chr4 (408-453)||(39086631-39086677)
chr4 (67-153)||(41278644-41278730)
chr4 (408-453)||(43292365-43292411)
chr4 (64-106)||(47009215-47009257)
chr4 (406-453)||(169011-169060)
chr4 (44-153)||(5545646-5545755)
chr4 (406-453)||(293225-293273)
chr4 (41-153)||(19447199-19447311)
chr4 (35-107)||(39471154-39471226)
chr4 (402-453)||(39744024-39744076)
chr4 (59-107)||(48339451-48339499)
chr4 (405-453)||(48405959-48406007)
chr4 (35-107)||(48608077-48608149)
chr4 (35-103)||(49769919-49769987)
chr4 (56-92)||(50879474-50879510)
[»] chr1 (95 HSPs)
chr1 (33-153)||(11430509-11430628)
chr1 (35-153)||(11135807-11135925)
chr1 (34-135)||(41095602-41095703)
chr1 (33-153)||(32848575-32848695)
chr1 (35-153)||(14093995-14094113)
chr1 (35-107)||(11135736-11135808)
chr1 (35-135)||(13388331-13388431)
chr1 (34-153)||(50773104-50773223)
chr1 (29-107)||(14094112-14094190)
chr1 (33-107)||(41917990-41918064)
chr1 (35-107)||(11430438-11430510)
chr1 (39-107)||(41095720-41095788)
chr1 (32-146)||(29418556-29418671)
chr1 (33-105)||(28109864-28109935)
chr1 (35-107)||(32848694-32848766)
chr1 (74-153)||(41918063-41918142)
chr1 (38-107)||(19101712-19101781)
chr1 (38-107)||(22540368-22540437)
chr1 (35-152)||(28109937-28110053)
chr1 (33-153)||(30678904-30679023)
chr1 (32-140)||(43832350-43832458)
chr1 (41-148)||(50424866-50424973)
chr1 (34-104)||(6133738-6133808)
chr1 (33-107)||(44739113-44739187)
chr1 (34-107)||(9165298-9165371)
chr1 (38-107)||(15523210-15523279)
chr1 (38-107)||(15531204-15531273)
chr1 (38-107)||(21466682-21466751)
chr1 (69-149)||(24436495-24436575)
chr1 (406-453)||(19007733-19007780)
chr1 (33-104)||(25543335-25543406)
chr1 (36-103)||(39039470-39039537)
chr1 (53-103)||(50308772-50308822)
chr1 (31-92)||(41948137-41948198)
chr1 (34-107)||(44271914-44271987)
chr1 (408-453)||(49318174-49318219)
chr1 (41-153)||(13114670-13114782)
chr1 (35-107)||(26980373-26980445)
chr1 (402-453)||(42611179-42611231)
chr1 (35-107)||(43851146-43851218)
chr1 (68-107)||(2225254-2225293)
chr1 (33-104)||(13114784-13114855)
chr1 (407-453)||(32163051-32163098)
chr1 (64-107)||(32211895-32211938)
chr1 (39-153)||(8899082-8899195)
chr1 (408-453)||(9347126-9347172)
chr1 (407-453)||(9347559-9347605)
chr1 (403-453)||(20480163-20480213)
chr1 (408-453)||(48105124-48105170)
chr1 (68-109)||(4578686-4578727)
chr1 (408-453)||(20371361-20371406)
chr1 (408-453)||(20480620-20480665)
chr1 (408-453)||(27172116-27172161)
chr1 (66-107)||(28218159-28218200)
chr1 (405-453)||(50615237-50615286)
chr1 (405-453)||(50623065-50623114)
chr1 (37-153)||(33114039-33114154)
chr1 (407-453)||(28633719-28633766)
chr1 (68-107)||(41958113-41958152)
chr1 (32-107)||(44760668-44760742)
chr1 (411-453)||(46823846-46823889)
chr1 (402-453)||(49317746-49317797)
chr1 (65-104)||(50424980-50425019)
chr1 (411-453)||(50430089-50430132)
chr1 (33-104)||(50773225-50773296)
chr1 (407-453)||(999533-999579)
chr1 (55-152)||(15660962-15661057)
chr1 (403-453)||(20371035-20371084)
chr1 (408-453)||(1176717-1176762)
chr1 (38-91)||(3872760-3872813)
chr1 (76-121)||(8665251-8665296)
chr1 (74-107)||(13388450-13388483)
chr1 (409-453)||(13918875-13918920)
chr1 (57-106)||(37553061-37553110)
chr1 (56-104)||(46335112-46335163)
chr1 (408-453)||(47498301-47498345)
chr1 (405-453)||(47955303-47955352)
chr1 (408-453)||(49318451-49318496)
chr1 (408-453)||(50615629-50615674)
chr1 (408-453)||(50623457-50623502)
chr1 (405-453)||(999109-999157)
chr1 (406-453)||(4692441-4692489)
chr1 (406-453)||(8109001-8109049)
chr1 (34-74)||(13889290-13889330)
chr1 (55-107)||(18157055-18157107)
chr1 (64-100)||(24886063-24886099)
chr1 (406-453)||(27172549-27172597)
chr1 (55-99)||(28274803-28274847)
chr1 (39-99)||(29068200-29068260)
chr1 (70-106)||(35336896-35336932)
chr1 (406-453)||(39692008-39692056)
chr1 (402-453)||(46824286-46824338)
chr1 (406-453)||(48104676-48104724)
chr1 (410-453)||(50526480-50526524)
chr1 (276-352)||(51606948-51607024)
[»] chr7 (88 HSPs)
chr7 (34-153)||(13919848-13919967)
chr7 (37-153)||(26703436-26703552)
chr7 (35-153)||(14759711-14759829)
chr7 (35-145)||(19840879-19840989)
chr7 (33-153)||(25428471-25428591)
chr7 (41-153)||(45909524-45909636)
chr7 (33-120)||(37549619-37549706)
chr7 (34-153)||(27888350-27888468)
chr7 (34-107)||(17354638-17354711)
chr7 (32-107)||(26703551-26703624)
chr7 (36-107)||(22786149-22786220)
chr7 (39-107)||(13919781-13919849)
chr7 (35-107)||(33008101-33008173)
chr7 (75-153)||(17354561-17354639)
chr7 (35-107)||(22189936-22190008)
chr7 (41-153)||(24539123-24539235)
chr7 (39-107)||(31959968-31960036)
chr7 (33-107)||(32205074-32205145)
chr7 (36-107)||(45909453-45909525)
chr7 (36-107)||(19494450-19494521)
chr7 (64-146)||(26459068-26459150)
chr7 (33-107)||(27888277-27888351)
chr7 (33-103)||(31502579-31502649)
chr7 (66-107)||(11824099-11824140)
chr7 (32-153)||(17749762-17749883)
chr7 (76-153)||(19494374-19494451)
chr7 (83-148)||(21963172-21963237)
chr7 (38-107)||(25428590-25428659)
chr7 (55-152)||(26189972-26190069)
chr7 (32-104)||(24539237-24539309)
chr7 (64-107)||(7775026-7775069)
chr7 (32-107)||(19422945-19423020)
chr7 (64-107)||(44511047-44511090)
chr7 (350-407)||(9045166-9045223)
chr7 (38-107)||(14795131-14795200)
chr7 (38-107)||(15242123-15242192)
chr7 (68-153)||(22786219-22786304)
chr7 (38-107)||(32212980-32213049)
chr7 (405-453)||(37972404-37972453)
chr7 (406-453)||(29292920-29292968)
chr7 (32-103)||(2520627-2520698)
chr7 (407-453)||(10533033-10533080)
chr7 (41-104)||(14759646-14759709)
chr7 (33-104)||(17749689-17749760)
chr7 (68-107)||(31874061-31874100)
chr7 (407-453)||(37889267-37889314)
chr7 (408-453)||(9035301-9035347)
chr7 (408-453)||(29293354-29293400)
chr7 (408-453)||(37888833-37888879)
chr7 (33-107)||(39254078-39254152)
chr7 (408-453)||(3204669-3204713)
chr7 (405-453)||(3205101-3205150)
chr7 (35-104)||(10619506-10619574)
chr7 (405-453)||(17156964-17157013)
chr7 (405-453)||(22740153-22740202)
chr7 (34-103)||(27949269-27949338)
chr7 (276-340)||(14629853-14629916)
chr7 (406-453)||(20419332-20419380)
chr7 (39-107)||(27320226-27320294)
chr7 (406-453)||(38826921-38826969)
chr7 (31-99)||(41873427-41873495)
chr7 (72-107)||(8073399-8073434)
chr7 (406-453)||(13744241-13744288)
chr7 (411-453)||(20418891-20418934)
chr7 (43-106)||(23934021-23934084)
chr7 (39-106)||(42887740-42887807)
chr7 (68-107)||(46517321-46517360)
chr7 (407-452)||(9034866-9034912)
chr7 (408-453)||(13741557-13741603)
chr7 (37-107)||(17813885-17813954)
chr7 (407-453)||(18864410-18864456)
chr7 (73-107)||(41508386-41508420)
chr7 (405-453)||(16198985-16199034)
chr7 (408-453)||(27096047-27096092)
chr7 (408-453)||(27182211-27182256)
chr7 (408-453)||(48359320-48359365)
chr7 (64-153)||(49139943-49140032)
chr7 (33-93)||(2520715-2520775)
chr7 (79-107)||(11692220-11692248)
chr7 (35-107)||(12263547-12263619)
chr7 (402-453)||(13863964-13864016)
chr7 (39-91)||(27949402-27949454)
chr7 (33-89)||(30742664-30742720)
chr7 (402-453)||(37971954-37972006)
chr7 (284-352)||(41531557-41531625)
chr7 (406-453)||(42418589-42418637)
chr7 (64-100)||(43930078-43930114)
chr7 (62-106)||(47822003-47822047)
[»] scaffold0099 (1 HSPs)
scaffold0099 (68-153)||(27381-27468)
[»] scaffold0543 (1 HSPs)
scaffold0543 (64-107)||(9690-9733)
[»] scaffold0492 (1 HSPs)
scaffold0492 (64-107)||(11236-11279)
[»] scaffold0460 (2 HSPs)
scaffold0460 (403-453)||(325-376)
scaffold0460 (408-453)||(771-816)
[»] scaffold0176 (2 HSPs)
scaffold0176 (406-453)||(19619-19666)
scaffold0176 (407-453)||(20051-20098)
[»] scaffold0069 (2 HSPs)
scaffold0069 (408-453)||(50515-50560)
scaffold0069 (403-453)||(50070-50119)
[»] scaffold0029 (1 HSPs)
scaffold0029 (405-453)||(9902-9951)
[»] scaffold0838 (1 HSPs)
scaffold0838 (67-107)||(2251-2291)
[»] scaffold0832 (1 HSPs)
scaffold0832 (67-107)||(2282-2322)
[»] scaffold0041 (1 HSPs)
scaffold0041 (406-453)||(38703-38751)
[»] scaffold0018 (1 HSPs)
scaffold0018 (41-153)||(27880-27991)
[»] scaffold0017 (1 HSPs)
scaffold0017 (408-453)||(185282-185328)
[»] scaffold0016 (1 HSPs)
scaffold0016 (39-93)||(204707-204761)
[»] scaffold0001 (1 HSPs)
scaffold0001 (400-453)||(183670-183724)
[»] scaffold0005 (1 HSPs)
scaffold0005 (55-99)||(296853-296897)


Alignment Details
Target: chr2 (Bit Score: 381; Significance: 0; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 17 - 453
Target Start/End: Original strand, 37719813 - 37720250
Alignment:
Q  17 aaaaataatttgtgataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacataca 116  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37719813 aaaaataatgtgtcataagaggaatgctagcaacattctcttttgagcactctttctagcactcactcttttattggatgaaatcaatgtaggacataca 37719912  T
Q  117 ctttagaaatggaacccacttaaaatggtgggacatagtggactctttgttcaatgtatattttaactttaacttgaattgaacggtgttgtaaagagaa 216  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37719913 ctttagaaatggaatccacttaaaatggtgggacatagtggactctttgttcaatgtatattttaactttaacttgaattgaacggtgttgtaaagagaa 37720012  T
Q  217 gagttttggtttatgatcctttgagggtgccgtttaatttgggaaagcaaacnnnnnnnccatcatgggaaagttaaaccaagaccatagatttaatatt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  37720013 gagttttggtttatgatcctttgagggtgccgtttaatttgggaaagcaaactttttttccatcatgggaaagttaaaccaagaccatagatttaatatt 37720112  T
Q  317 ttataatttggatggctcagatttattacctgctaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataaggcttaatt 416  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37720113 ttataatttggatggctcagattcattacctgctaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataaggcttaatt 37720212  T
Q  417 gca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||| ||||||||| ||||||||||||||||||||||||    
T  37720213 gcacttttcccccctatagtttgccaattgtgcgattt 37720250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 28898034 - 28898149
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccactt 137  Q
    |||||||||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||||| |    
T  28898034 gaatgctagcaacactctcttttgagtactctctttagcactcactcttttattggatgaaatcaatgtaggatctacactttggaaatgaaacccacat 28898133  T
Q  138 aaaatggtgggacata 153  Q
    ||| ||||||||||||    
T  28898134 aaagtggtgggacata 28898149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 42183075 - 42182957
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    |||||||||||| |||| | |||||||| |||||||||  ||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  42183075 gaggaatgctagtaacactctcttttgaacactctctccggcactaactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaaccca 42182976  T
Q  135 cttaaaatggtgggacata 153  Q
    | |||| ||||||||||||    
T  42182975 cataaagtggtgggacata 42182957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 1110375 - 1110266
Alignment:
Q  44 tagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatg 143  Q
    |||||||| | | ||||||||||||| |||| || ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| ||    
T  1110375 tagcaacactcttttttgagcactctttctaacattcactcttttattgggtgaaatcaatgtaggacatatactttggaaatggaacccacataaagtg 1110276  T
Q  144 gtgggacata 153  Q
    ||||||||||    
T  1110275 gtgggacata 1110266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 32 - 153
Target Start/End: Complemental strand, 37228688 - 37228567
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaac 131  Q
    ||||||||| |||| ||||| | ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| | ||||||  ||| |||||    
T  37228688 taagaggaaggctaccaacactctcttttgagcactctttctagcactcacttttttattgggtgaaatcaatgtaggacctgcactttgaaaacggaac 37228589  T
Q  132 ccacttaaaatggtgggacata 153  Q
    |||| |||| ||||||||||||    
T  37228588 ccacataaagtggtgggacata 37228567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 15509102 - 15508982
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    |||||||||| |||||||| | |||||| |||||||||| || |||| ||||||| ||||| ||||||||||||||||  |||||||| |||||||||||    
T  15509102 aagaggaatgttagcaacactctctttttagcactctctatatcacttactctttaattgggtgaaatcaatgtaggatctacactttggaaatggaacc 15509003  T
Q  133 cacttaaaatggtgggacata 153  Q
    |||  ||||||||||||||||    
T  15509002 cacaaaaaatggtgggacata 15508982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 4964671 - 4964785
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccactta 138  Q
    ||||||||||| | | ||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||  ||||| || |||| ||    
T  4964671 aatgctagcaatactctcttttgaatactctctctagcactcactcttttattggataagatcaatgtaggacctacactttgaaaatgaaatccacata 4964770  T
Q  139 aaatggtgggacata 153  Q
    || ||||||||||||    
T  4964771 aagtggtgggacata 4964785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 42182889 - 42182958
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42182889 gaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgta 42182958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 4964856 - 4964784
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  4964856 gaggaatgctagcaacattctcttttgagtactctctctagcactcacttttttattgggtgaaatcaatgta 4964784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 28898220 - 28898148
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28898220 gaggaatgctagcaacactcttttttgagcactctctctagcactcactcttttattgggtgaaatcaatgta 28898148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 27968913 - 27969000
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacacttt 120  Q
    ||||| ||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| ||||||||    
T  27968913 aagagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaattagtgtaggacctacacttt 27969000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 28091674 - 28091587
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacacttt 120  Q
    ||||| ||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| ||||||||    
T  28091674 aagagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaattagtgtaggacctacacttt 28091587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 28101906 - 28101819
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacacttt 120  Q
    ||||| ||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| ||||||||    
T  28101906 aagagaaatgctagcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaattagtgtaggacctacacttt 28101819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 20951601 - 20951686
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacacttt 120  Q
    ||||||||||||||||||| | |||||||||||||||  |||||||| | ||||||||||| ||||||||||||||||| ||||||||    
T  20951601 aagaggaatgctagcaacactctcttttgagcactct--ctagcacttattcttttattgggtgaaatcaatgtaggacctacacttt 20951686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 37398806 - 37398893
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacacttt 120  Q
    ||||||||||||||||||| | | ||||||||| |||||||| |||| ||| ||||||||||||||||| ||||||||| ||||||||    
T  37398806 aagaggaatgctagcaacactcttttttgagcattctctctaacacttacttttttattggatgaaatccatgtaggacctacacttt 37398893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 242 - 341
Target Start/End: Original strand, 24727821 - 24727920
Alignment:
Q  242 ggtgccgtttaatttgggaaagcaaacnnnnnnnccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagattta 341  Q
    |||||| ||||||||||||||||| ||       ||||||||| |||||||||||||| |||||||||||||| |||| ||||||||||||||| |||||    
T  24727821 ggtgccatttaatttgggaaagcacacttttttcccatcatggaaaagttaaaccaaggccatagatttaatactttaaaatttggatggctcaaattta 24727920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 153
Target Start/End: Complemental strand, 6315847 - 6315726
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaac 131  Q
    |||||||||||||| ||||| | ||||||||||||||| | ||  | ||||||||||||||||  |||| |||||||||| |||||||| ||||||||||    
T  6315847 taagaggaatgctaacaacactctcttttgagcactctttttaatattcactcttttattggaaaaaattaatgtaggacctacactttggaaatggaac 6315748  T
Q  132 ccacttaaaatggtgggacata 153  Q
    | |  |||| |||||| |||||    
T  6315747 ctatataaagtggtggaacata 6315726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 31395468 - 31395557
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||| |||||| | ||||||||| |||| |||| ||| ||||||||    
T  31395468 cactctctctagcactcaatcttttattgggtgaaataaatgtaggacctacactatggaaatggaatccacataaagtggagggacata 31395557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 45554567 - 45554636
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||| |  ||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  45554567 gaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgta 45554636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 1107039 - 1107107
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||| |||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  1107039 aatgttagcaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgta 1107107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 6980299 - 6980235
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 103  Q
    |||||||||||||||  ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  6980299 aatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatcaa 6980235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 31395628 - 31395556
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||| |||||||| | ||||||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  31395628 gaggaatgttagcaacactctcttttgagcactctctttagcactcactcctttattgggtgaaatcaatgta 31395556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 37228499 - 37228559
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaa 99  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||    
T  37228499 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaa 37228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 1110192 - 1110267
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||||| | ||||| ||||| |||||||| |||||||||||||||||  |||||||||||||    
T  1110192 taagaggaatgctagcaacactctctttcgagcattctctctaacactcactcttttattgagtgaaatcaatgta 1110267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 24895291 - 24895373
Alignment:
Q  65 actctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgg 147  Q
    |||||||||| |||||||||||| ||||| | |||||||||| || |||||||||| |||||||||| ||| |||||||||||    
T  24895291 actctctctaacactcactctttcattgggttaaatcaatgtgggtcatacactttggaaatggaactcacataaaatggtgg 24895373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 11539420 - 11539489
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||||||||| ||||| |   |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  11539420 gaggaatgctaacaacactcatttttgaacactctttctagcactcactcttttattggatgaaatcaat 11539489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 40535173 - 40535104
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||||||||| ||||| ||||||| |||||| ||||||| |||||||||||||||||| | ||||||||    
T  40535173 gaggaatgctaacaacactatctttcgagcaccctctctaacactcactcttttattgggtaaaatcaat 40535104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 15508911 - 15508983
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||| |||||||| | |||||||| |||||| |||| |||||||||||||||||  |||||||||||||    
T  15508911 gaggaatgttagcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgta 15508983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 18511392 - 18511320
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| |  ||||| | ||||||| ||| |||||||||||||||||||| |||||||||||    
T  18511392 gaggaatgctagcaacactcactttttaacactctcactatcactcactcttttattggataaaatcaatgta 18511320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 26767944 - 26767872
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| |  ||||| | || ||||||||||||| ||||||||| |||||||||||||||||    
T  26767944 gaggaatgctagcaacactcacttttcaacattctctctagcacttactcttttactggatgaaatcaatgta 26767872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 33746953 - 33747032
Alignment:
Q  74 agcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    |||||||||| ||||||||||||||| |||||| | || || ||||||||||||||||| |  |||| ||||||||||||    
T  33746953 agcactcacttttttattggatgaaaacaatgtggaacctatactttagaaatggaaccaatataaagtggtgggacata 33747032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 400 - 453
Target Start/End: Original strand, 8851140 - 8851194
Alignment:
Q  400 ttaaataaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  8851140 ttaaataaggtttaattgcacttttcccccctatagtttgccaattgtgcgattt 8851194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 21447257 - 21447175
Alignment:
Q  68 ctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggac 150  Q
    ||||||| ||| |||||||||||||  |||||||||||| || | |||||||| |||||||  ||||| ||||||||||||||    
T  21447257 ctctctaacacccactcttttattgtgtgaaatcaatgtgggtcttacactttggaaatgggtcccacataaaatggtgggac 21447175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 9470109 - 9470150
Alignment:
Q  66 ctctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  9470109 ctctctctaacactcactcttttattggatgaaatcaatgta 9470150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 10339767 - 10339821
Alignment:
Q  37 ggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattgg 93  Q
    |||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||    
T  10339767 ggaatgctagcaaca--atcttttgaacactctctctagcactcactattttattgg 10339821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 41805960 - 41805887
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||| | | |||||  |||| ||| || |||||||||||||||||||| |||||||||||    
T  41805960 agaggaatgctagcaacactctattttggacactttctttaacactcactcttttattggataaaatcaatgta 41805887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 12989188 - 12989260
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| |  ||||| | |||||||| |  |||||||||||| |||||||||||||||||||    
T  12989188 gaggaatgctagcaacactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgta 12989260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 407 - 453
Target Start/End: Original strand, 5378660 - 5378707
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  5378660 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 5378707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 44274229 - 44274303
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||| ||||||||||||| |  |||| |||||||||||||| || ||||||||| ||||||| |||||||||||    
T  44274229 taagagaaatgctagcaacactcacttt-gagcactctctctaacattcactctttcattggataaaatcaatgta 44274303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 17850978 - 17851024
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  17850978 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 17851024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 19427430 - 19427359
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgt 106  Q
    |||| |||||||||||||| | |||||| | ||||||||  |||||||||||| | ||||||||||||||||||    
T  19427430 aagaagaatgctagcaacactctctttttaacactctct--agcactcactctatcattggatgaaatcaatgt 19427359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 17188092 - 17188133
Alignment:
Q  65 actctctctagcactcactcttttattggatgaaatcaatgt 106  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  17188092 actctctctatcactcactattttattggatgaaatcaatgt 17188133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 26767754 - 26767823
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatca 102  Q
    ||||| ||||||||||||| | |||||||| |||||| ||||  ||||||||||||||||| | ||||||    
T  26767754 aagagtaatgctagcaacactttcttttgaacactctatctaatactcactcttttattggtttaaatca 26767823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 3804585 - 3804653
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||| ||| |  ||||| | |||||||| || || |||||||||||||||||||||||||||||    
T  3804585 aatgctagctacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgta 3804653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 453
Target Start/End: Complemental strand, 6325399 - 6325355
Alignment:
Q  410 cttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattt 6325355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 8851638 - 8851590
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  8851638 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 8851590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 16911321 - 16911277
Alignment:
Q  409 gcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||||    
T  16911321 gcttaattgcactttcgcccctatagtttgccaattgtgcgattt 16911277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 42579811 - 42579771
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  42579811 cactctctcaaacactcactcttttattggatgaaatcaat 42579771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 5380014 - 5379967
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  5380014 aggcttaattgcacttttcccccctatagtttaccaattgtgcgattt 5379967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 38104403 - 38104316
Alignment:
Q  66 ctctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    ||||||||| |||||||||| | |||| || || ||||||| || |||||||||| | |||||||||||  |||| |||||| |||||    
T  38104403 ctctctctaacactcactctctcattgaattaattcaatgtgggtcatacactttgggaatggaacccaaataaagtggtggaacata 38104316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 41790967 - 41790920
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  41790967 aggcttaattgcacttttcccccctatattttgccaattgtgcgattt 41790920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 16910827 - 16910873
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||||    
T  16910827 ggcttaattgcacttttcccccatgtagtttgccaattgtgcgattt 16910873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 19141898 - 19141857
Alignment:
Q  411 ttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  19141898 ttaattgcactttccccc-tatagtttgccaattgtgcgattt 19141857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 30718477 - 30718443
Alignment:
Q  67 tctctctagcactcactcttttattggatgaaatc 101  Q
    ||||||||| |||||||||||||||||||||||||    
T  30718477 tctctctagtactcactcttttattggatgaaatc 30718443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 41790494 - 41790536
Alignment:
Q  411 ttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||    
T  41790494 ttaattgcatttttccccctatagtttgtcaattgtgcgattt 41790536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 453
Target Start/End: Original strand, 6324930 - 6324963
Alignment:
Q  420 ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||| ||||||||||||||||||||||||    
T  6324930 ttttcccccctatagtttgccaattgtgcgattt 6324963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 8009521 - 8009578
Alignment:
Q  46 gcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 103  Q
    |||||| | |||||||| |||||| |||| |||||||| |||| ||||||||||||||    
T  8009521 gcaacactctcttttgaacactctttctaacactcacttttttgttggatgaaatcaa 8009578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 12989370 - 12989309
Alignment:
Q  41 tgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatca 102  Q
    ||||||||||| | |||||||| |||||||||||  ||||||||| ||||||| | ||||||    
T  12989370 tgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatca 12989309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 38490894 - 38490849
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||| || |||||||| |||||||||||||||    
T  38490894 ggcttaattgcactttcctccctatagtttaccaattgtgcgattt 38490849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 5793445 - 5793493
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||| ||||||||| ||||||||| | ||||||||||||||||||||||    
T  5793445 aaggtttaattgcacttttcccccttgtagtttgccaattgtgcgattt 5793493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 16719609 - 16719541
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||| |  ||||| | |||| ||| ||||||  ||||||||||| |||||||||||||||    
T  16719609 aatgctagcaacactcacttttcaacactgtctttagcacatactcttttattagatgaaatcaatgta 16719541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 20347520 - 20347472
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| |||  |||||||||||||||||||    
T  20347520 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattt 20347472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 23464009 - 23463937
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||| |||||| |  |||||||| | || ||||| | ||||||  |||||||||||||    
T  23464009 gaggaatgctagcaacattctctttttaatactctctcaaacattcactatcttattgagtgaaatcaatgta 23463937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 407
Target Start/End: Original strand, 24727930 - 24727958
Alignment:
Q  379 aattgtgaccccacctcataattaaataa 407  Q
    |||||||||||||||||||||||||||||    
T  24727930 aattgtgaccccacctcataattaaataa 24727958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 33678298 - 33678226
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| |  ||||||| |||||| | || |||| | ||||| |||| ||||||||||||||    
T  33678298 gaggaatgctagcaacactcacttttgaacactctttataacacttattctttaattgaatgaaatcaatgta 33678226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 44274421 - 44274302
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    ||||||||||||| ||||| | |||||| |  | |||||||| |||||||||| ||||||| | |||||| ||| |||  ||||||||  || | |||||    
T  44274421 aagaggaatgctaacaacactctcttttaaatattctctctaacactcactctgttattggtttaaatcattgt-ggatctacactttgaaagttgaacc 44274323  T
Q  133 cacttaaaatggtgggacata 153  Q
    |||  ||| ||||||||||||    
T  44274322 cacacaaagtggtgggacata 44274302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 3e-55; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 242 - 407
Target Start/End: Complemental strand, 31148493 - 31148328
Alignment:
Q  242 ggtgccgtttaatttgggaaagcaaacnnnnnnnccatcatgggaaagttaaaccaagaccatagattt-aatattttataatttggatggctcagattt 340  Q
    |||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||    
T  31148493 ggtgccgtttaatttgggaaagcacacttttttcccatcatgggaaagttaaaccaagaccatagattttaatactttttaatttggatggctcagattt 31148394  T
Q  341 attacctgctaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataa 407  Q
    | ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31148393 actac-tgttaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataa 31148328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 31 - 153
Target Start/End: Original strand, 42224581 - 42224703
Alignment:
Q  31 ataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaa 130  Q
    ||||||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  42224581 ataagaggaatgctagcaacactctcttttgagaactctctccagcactcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaa 42224680  T
Q  131 cccacttaaaatggtgggacata 153  Q
    ||||| |||| ||||||||||||    
T  42224681 cccacataaagtggtgggacata 42224703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 153
Target Start/End: Original strand, 17568696 - 17568814
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||||||||||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| |||||||| ||||| ||||| |    
T  17568696 gaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgtaggacctacactttggaaatagaaccta 17568795  T
Q  135 cttaaaatggtgggacata 153  Q
    | |||| ||||||||||||    
T  17568796 cctaaagtggtgggacata 17568814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 24915241 - 24915123
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    ||||||||| ||||||||| | |||||| ||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  24915241 aagaggaatactagcaacactctcttttaagcactctct--agcactcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacc 24915144  T
Q  133 cacttaaaatggtgggacata 153  Q
    ||| |||| ||||||||||||    
T  24915143 cacataaagtggtgggacata 24915123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 24991072 - 24990954
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    ||||||||| ||||||||| | |||||| ||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||    
T  24991072 aagaggaatactagcaacactctcttttaagcactctct--agcactcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacc 24990975  T
Q  133 cacttaaaatggtgggacata 153  Q
     || |||| ||||||||||||    
T  24990974 tacataaagtggtgggacata 24990954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 26072289 - 26072171
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||| ||||| |||||| |||| |||||||| |||||| |  |||    
T  26072289 gaggaatgctagcaacactctcttttgagcattctctctagcactcactcttttattgggtgaaaacaatgtgggacctacactttggaaatgaattcca 26072190  T
Q  135 cttaaaatggtgggacata 153  Q
    | |||| ||||| ||||||    
T  26072189 cataaagtggtgagacata 26072171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 34818368 - 34818267
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccactta 138  Q
    |||||||| |||||| |||||||||||||||||||| |||||||| ||||||| | | ||||||||||||||| || |||||||||||||||||||| ||    
T  34818368 aatgctaggaacattctcttttgagcactctctctaacactcacttttttatttggtaaaatcaatgtaggacctatactttagaaatggaacccacata 34818269  T
Q  139 aa 140  Q
    ||    
T  34818268 aa 34818267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 4959464 - 4959346
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||| |||||| |||| | |||||||||||||||||||||||||||||||||||||||  ||||||||||||  || ||||||||  ||||| ||||||    
T  4959464 gaggagtgctagtaacactctcttttgagcactctctctagcactcactcttttattgggggaaatcaatgtatcacctacactttgaaaatgtaaccca 4959365  T
Q  135 cttaaaatggtgggacata 153  Q
    | ||||||| || ||||||    
T  4959364 cataaaatgatgagacata 4959346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 42224774 - 42224702
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  42224774 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgta 42224702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 13456170 - 13456273
Alignment:
Q  44 tagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatg 143  Q
    |||||||| | ||||||||| |||||  |||||||||||||||||||| | ||||||||||||||| | ||||||||  ||||||||||||| |||||||    
T  13456170 tagcaacactctcttttgagtactct--ctagcactcactcttttattaggtgaaatcaatgtaggtcctacactttgaaaatggaacccacataaaatg 13456267  T
Q  144 gtggga 149  Q
    ||||||    
T  13456268 gtggga 13456273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 8912698 - 8912578
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcac--tctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    |||||||| |||||||| | ||||||||||||  |||||||| |||||||||||||||| | |||||||||| || |||||||||||| |||||| ||||    
T  8912698 gaggaatgttagcaacagtctcttttgagcacactctctctatcactcactcttttattaggtgaaatcaatatatgacatacactttggaaatgaaacc 8912599  T
Q  133 cacttaaaatggtgggacata 153  Q
    |||  ||| ||| ||||||||    
T  8912598 cacagaaagtggagggacata 8912578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 32050495 - 32050375
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    |||| |||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| |    |||||||  ||||||||||    
T  32050495 aagatgaatgctagcaacactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaatgtatgttccacactttgaaaatggaacc 32050396  T
Q  133 cacttaaaatggtgggacata 153  Q
    ||| |||| || || ||||||    
T  32050395 cacataaagtgatgagacata 32050375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 40971636 - 40971564
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  40971636 gaggaatgctaacaacactctcttttgagcactctctctagcactcactcttttattgagtgaaatcaatgta 40971564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 6264067 - 6263951
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||| ||||||||||| | |||||| |||||||| ||||||||||||||||||| ||| ||||||||||||| ||   ||||||| ||| |||||||||    
T  6264067 gaggagtgctagcaacactctcttttaagcactctatctagcactcactcttttagtgggtgaaatcaatgtaagatcaacactttggaactggaaccca 6263968  T
Q  135 cttaaaatggtgggacata 153  Q
      |||| ||||||||||||    
T  6263967 --taaagtggtgggacata 6263951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 4959273 - 4959347
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||| | ||||||||||||||||||||  || |||||||||||||| |||||||||||||    
T  4959273 aagaggaatgctagcaacactctcttttgagcactctctctaatacccactcttttattgggtgaaatcaatgta 4959347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 153
Target Start/End: Original strand, 40971447 - 40971565
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||| ||||||||||| | |||||||| |||||| |||| |||||||| ||||||||| | ||||||||||| ||| |||||||| |||||| |||  |    
T  40971447 gaggagtgctagcaacactctcttttgaacactctatctaacactcactattttattgggtaaaatcaatgtaagacctacactttggaaatgaaactta 40971546  T
Q  135 cttaaaatggtgggacata 153  Q
    | |||| ||||||||||||    
T  40971547 cataaagtggtgggacata 40971565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 30326054 - 30325985
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  30326054 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgta 30325985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 28490907 - 28490837
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 103  Q
    ||||||||||||||||||| |  ||||| |  ||||||||||||| ||||| |||||||||||||||||||    
T  28490907 aagaggaatgctagcaacagtcacttttcaaaactctctctagcattcacttttttattggatgaaatcaa 28490837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 31542428 - 31542354
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||| ||||||||||| | |||||||||||||||||||||| |||||| |  |||||||| |||||| ||||||    
T  31542428 aagagaaatgctagcaaaactatcttttgagcactctctctaacactcatttatttattgggtgaaattaatgta 31542354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 34368548 - 34368478
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatca 102  Q
    |||||||||||||||||||| | |||||||||||||||||||  ||| |||||| ||||||| | ||||||    
T  34368548 taagaggaatgctagcaacactctcttttgagcactctctctgtcacccactctcttattggtttaaatca 34368478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 2443682 - 2443739
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttatt 91  Q
    |||||||||||||||||| | ||||||||||||||| ||||| |||| ||||||||||    
T  2443682 agaggaatgctagcaacactctcttttgagcactctgtctagaactcgctcttttatt 2443739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 13456346 - 13456276
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||| || | ||||||||||||||||| |   |||||||||||||| ||||||||||||||||    
T  13456346 gaggaatgctagcagcactttcttttgagcactctctatt--actcactcttttatcggatgaaatcaatgta 13456276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 6263881 - 6263949
Alignment:
Q  36 aggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||||| ||| |||| | |||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  6263881 aggaatgttagtaacactctcttttgagcactctctctatcactcactcctttattgggtaaaatcaat 6263949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 12498988 - 12498936
Alignment:
Q  402 aaataaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  12498988 aaattaggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 12498936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 407 - 453
Target Start/End: Original strand, 12498566 - 12498613
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  12498566 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 12498613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 17568879 - 17568816
Alignment:
Q  41 tgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||| |||||  |||||||||| |||||| |||||||||||||||||||||  ||||||||||    
T  17568879 tgctaacaacacaatcttttgagtactctccctagcactcactcttttattgagtgaaatcaat 17568816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 26571219 - 26571172
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  26571219 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 26571172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 27592606 - 27592563
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  27592606 cactctctttagcactcactattttattggatgaaatcaatgta 27592563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 28611771 - 28611830
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattg 92  Q
    ||||| ||||||||||||| | |||||||||||||||||||| |||  ||||||||||||    
T  28611771 aagagaaatgctagcaacactctcttttgagcactctctctaacaccaactcttttattg 28611830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 28611962 - 28611901
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggat 95  Q
    |||||||||||| ||||| |  ||||||||||||||||||| || ||||||||| |||||||    
T  28611962 agaggaatgctaacaacactcacttttgagcactctctctaacattcactctttcattggat 28611901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 34368357 - 34368429
Alignment:
Q  35 gaggaatgctagcaaca-ttatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| |||| |||||| |||| |||||| |||||||||||| ||||||| ||| |||||||    
T  34368357 gaggaatgctagcaacacttat-ttttgaacactttctctaacactcactctttcattggataaaaccaatgta 34368429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 39246604 - 39246677
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||| |  ||||||||||  ||||||| || ||||| | ||||||||| |||||||||||    
T  39246604 agaggaatgctagcaacaatcacttttgagcatcctctctaacaatcactttcttattggataaaatcaatgta 39246677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 19515019 - 19514971
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  19515019 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 19514971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 32309477 - 32309549
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||  ||| | |||||| | || ||||||||||||||||||| ||||||||| |||| ||||||    
T  32309477 gaggaatgctagagacactctcttttcaacattctctctagcactcactctcttattggataaaattaatgta 32309549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 10142126 - 10142087
Alignment:
Q  68 ctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  10142126 ctctatagcactcactcttttattggataaaatcaatgta 10142087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 17537256 - 17537213
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||    
T  17537256 cactctctctatcactcactcttttatttgatcaaatcaatgta 17537213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 21207229 - 21207272
Alignment:
Q  411 ttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattt 21207272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 407
Target Start/End: Original strand, 36219754 - 36219789
Alignment:
Q  372 aaacaaaaattgtgaccccacctcataattaaataa 407  Q
    |||||||||| |||||||||||||||||||||||||    
T  36219754 aaacaaaaatcgtgaccccacctcataattaaataa 36219789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 37610200 - 37610247
Alignment:
Q  406 aaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||| |||| |||||||||||||||||| |||||    
T  37610200 aaggcttaattgcacttttccccctatagtttgccaattgtgtgattt 37610247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 37780318 - 37780365
Alignment:
Q  406 aaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||| |||| |||||||||||||||||| |||||    
T  37780318 aaggcttaattgcacttttccccctatagtttgccaattgtgtgattt 37780365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 43463754 - 43463801
Alignment:
Q  406 aaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  43463754 aaggtttaattgcacttttccccttatagtttgccaattgtgcgattt 43463801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 1649545 - 1649619
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||| |||  ||| | |||||| | ||||||||||| |||||||| | |||||||||||||| ||||||    
T  1649545 aagaggaatgttagggacactctcttttcaacactctctctaacactcactatcttattggatgaaattaatgta 1649619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 338
Target Start/End: Original strand, 4301939 - 4302001
Alignment:
Q  276 ccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagat 338  Q
    |||||||||||||||  ||| ||  |||||||||||||||||| | |||||||||||| ||||    
T  4301939 ccatcatgggaaagtcgaactaaagccatagatttaatatttttttatttggatggctaagat 4302001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 107
Target Start/End: Complemental strand, 5413878 - 5413848
Alignment:
Q  77 actcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||||||||||||||||    
T  5413878 actcactcttttattggatgaaatcaatgta 5413848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 26072106 - 26072172
Alignment:
Q  41 tgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||| ||||| | ||||||||||||||| ||||  ||||| |||||| |||| |||||||||||||    
T  26072106 tgctaacaacactctcttttgagcactctttctaatactcattctttttttgggtgaaatcaatgta 26072172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 27726833 - 27726907
Alignment:
Q  76 cactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggac 150  Q
    |||||||||||||||||| |||||| ||||| || | |||||||| |||||||  |||||| ||| |||| ||||    
T  27726833 cactcactcttttattgggtgaaattaatgtgggtcctacactttggaaatgggtcccactcaaagtggttggac 27726907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 41105562 - 41105632
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatca 102  Q
    |||||| ||||| ||||||| | ||||||||||||||||||||  |||| |||| ||||||| | ||||||    
T  41105562 taagagtaatgcgagcaacactctcttttgagcactctctctaatactcgctctcttattggtttaaatca 41105632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 43464246 - 43464200
Alignment:
Q  407 aggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  43464246 aggcttaattgcacttttccccctatagtttgtcaattgtgcgattt 43464200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 37610671 - 37610626
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||| | |||||||| |||||||||| |||||||||||||    
T  37610671 ggcttaattgtactttcccccctatagtttgctaattgtgcgattt 37610626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 2817147 - 2817195
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||| ||||||||| |||||| || ||||||||||||||||||||||||    
T  2817147 aaggtttaattgcacttttcctccctatagtttgccaattgtgcgattt 2817195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 14553520 - 14553567
Alignment:
Q  62 agcactctctctagcactcactct--tttattggatgaaatcaatgta 107  Q
    |||||||| |||||||||||||||  ||||||||||||||| ||||||    
T  14553520 agcactctttctagcactcactctcttttattggatgaaattaatgta 14553567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 19514525 - 19514572
Alignment:
Q  408 ggcttaattgcattttcccccg--tatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||||||   ||||||||||||||||||||||||    
T  19514525 ggcttaattgcactttcccccccctatagtttgccaattgtgcgattt 19514572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 22729492 - 22729448
Alignment:
Q  409 gcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||| ||| |||| |||| |||||||||||||||||||    
T  22729492 gcttaattgcacttttccccctataatttgccaattgtgcgattt 22729448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 28155847 - 28155811
Alignment:
Q  71 tctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  28155847 tctagcacttactcttttattgaatgaaatcaatgta 28155811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 31542268 - 31542352
Alignment:
Q  67 tctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttag-aaatggaacccacttaaaatggtgggac 150  Q
    ||||||||| ||||  ||||||||||| |||||||| ||||||||  ||| ||||| |||||||| |||| |||| || ||||||    
T  31542268 tctctctaggactcgttcttttattgggtgaaatcactgtaggacccacattttagaaaatggaatccacataaagtgatgggac 31542352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 34147566 - 34147518
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| |||| |||| ||||||||| ||||||||||||||    
T  34147566 aaggcttaattgcactttttccccctatagtttgtcaattgtgcgattt 34147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 2e-53; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 285 - 407
Target Start/End: Original strand, 5353544 - 5353666
Alignment:
Q  285 gaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttatataaaacaaaaattgt 384  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5353544 gaaagttaaaccaagatcatagatttaatattttataatttggatggttcagatttattacctgctaactttttgttgggttatataaaacaaaaattgt 5353643  T
Q  385 gaccccacctcataattaaataa 407  Q
    ||||| ||||||||| |||||||    
T  5353644 gacccaacctcataagtaaataa 5353666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 24748913 - 24749022
Alignment:
Q  44 tagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatg 143  Q
    |||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  24748913 tagcaacactctcttttgagcactctctctaacactcactcttttattggatgaaatcaatgtaggacctacactttagaaatggaacccacataaaatg 24749012  T
Q  144 gtgggacata 153  Q
    ||||||||||    
T  24749013 gtgggacata 24749022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 35 - 153
Target Start/End: Original strand, 37600124 - 37600242
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  37600124 gaggaatgctagcaacactctcttttgagcactctctctagcacccactcttttattggttgaattcaatgtaggacctacactttagaaatggaaccca 37600223  T
Q  135 cttaaaatggtgggacata 153  Q
    | |||| ||||||||||||    
T  37600224 cataaagtggtgggacata 37600242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 276 - 407
Target Start/End: Original strand, 32994959 - 32995090
Alignment:
Q  276 ccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttatataaaac 375  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| | ||||| ||| |||  |||||||||| |||||||||||||||    
T  32994959 ccatcatgggaaagttaaaccaaggtcatagatttaatattttttaatttggatggtttagattcattgcctattaactttttgatgggttatataaaac 32995058  T
Q  376 aaaaattgtgaccccacctcataattaaataa 407  Q
    |||||||||||| |||||||||| ||||||||    
T  32995059 aaaaattgtgactccacctcatatttaaataa 32995090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 35 - 153
Target Start/End: Original strand, 10769719 - 10769837
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    |||||||||||  |||| | ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  10769719 gaggaatgctaataacactctcttttgagcactctctctagcacttactcttttatttgatgaaatcaatgtaggacctacactttagaaatggaaccca 10769818  T
Q  135 cttaaaatggtgggacata 153  Q
      |||| ||||||||||||    
T  10769819 tataaagtggtgggacata 10769837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 35 - 153
Target Start/End: Original strand, 54140887 - 54141005
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||||||  ||||||||||||    
T  54140887 gaggaatgctagcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaatgtagaacctacactttgaaaatggaaccca 54140986  T
Q  135 cttaaaatggtgggacata 153  Q
    | |||| ||||||||||||    
T  54140987 cgtaaagtggtgggacata 54141005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 29775136 - 29775234
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||||||||||||||| | ||||||||||||||||||||||||  ||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||    
T  29775136 gaggaatgctagcaacactctcttttgagcactctctctagcac--actcttttattgggtgaaatcaaggtaggacctacactttggaaatggaaccca 29775233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 38928001 - 38928102
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    |||| |||||||||||||| | |||||||| |||| |||||| |||||||||||||||||| ||||||||||||| ||| |||||||| |||||||||||    
T  38928001 aagaagaatgctagcaacactctcttttgatcactttctctaacactcactcttttattgggtgaaatcaatgtaagacctacactttggaaatggaacc 38928100  T
Q  133 ca 134  Q
    ||    
T  38928101 ca 38928102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 37600316 - 37600241
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  37600316 taagaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgta 37600241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 35 - 152
Target Start/End: Complemental strand, 27243231 - 27243114
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||| ||||||||||| | |||||||| |||||| ||||  ||||||||| | ||||| | |||||||||| || |||||||||| |||||||||||||    
T  27243231 gaggagtgctagcaacactctcttttgaacactctttctaatactcactctctcattgggttaaatcaatgtgggtcatacactttggaaatggaaccca 27243132  T
Q  135 cttaaaatggtgggacat 152  Q
    | |||| |||||||||||    
T  27243131 cataaagtggtgggacat 27243114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 28529250 - 28529322
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| |  ||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  28529250 gaggaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgta 28529322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 46237090 - 46237158
Alignment:
Q  85 ttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||| |||| ||||||||||||    
T  46237090 ttttattggatgaaatcaatgtaggacctacattttagaaatggaacccacataaagtggtgggacata 46237158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 46237220 - 46237157
Alignment:
Q  44 tagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46237220 tagcaacactctcttttgagcactctctctagcaatcactcttttattggatgaaatcaatgta 46237157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 357913 - 357835
Alignment:
Q  68 ctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtg 146  Q
    ||||||| |||||||| |||||||||||||||||||||||||   |||||||| |||||||||||||| |||| |||||    
T  357913 ctctctatcactcacttttttattggatgaaatcaatgtaggtactacactttggaaatggaacccacataaagtggtg 357835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 27243042 - 27243112
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatg 105  Q
    |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  27243042 gagggatgctagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatg 27243112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 20493629 - 20493556
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||| |  ||||| | ||||||||||| ||||||||| ||||||||||||||||||||||    
T  20493629 agaggaatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgta 20493556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 44844138 - 44844049
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    ||||||||||| |||||||| ||||||||||| |||||| ||| || ||||||||||| |||| |||| ||| | |||||||||||||||    
T  44844138 cactctctctaacactcacttttttattggattaaatcattgtgggtcatacactttaaaaattgaactcacatgaaatggtgggacata 44844049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 10769908 - 10769836
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| | |||||||||||||||||||| |||  ||||||||||| | |||||||||||||    
T  10769908 gaggaatgctagcaacactctcttttgagcactctctctatcaccgactcttttatttggtgaaatcaatgta 10769836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 46160944 - 46161013
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||||||||||||||||| |  ||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  46160944 aagaggaatgctagcaacactcacttttgaacactct--ctagcactcactcttttattggatgaaatcaat 46161013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 54141056 - 54141004
Alignment:
Q  55 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  54141056 tcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgta 54141004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 20791296 - 20791365
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||| ||  ||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  20791296 gaatgctagcaacgttcacttttgcacactctctttagcactcactattttattggatgaaatcaatgta 20791365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 5452243 - 5452171
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| |  ||||| | |||||||| || || |||||||||||||||||||||||||||||    
T  5452243 gaggaatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgta 5452171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 13809269 - 13809149
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    ||||||| ||||||||||| | | | |||  |||| |||||| || ||| ||| ||||||| | ||| |||||| || |||| ||||| |||||||||||    
T  13809269 aagaggattgctagcaacactctttcttggacactttctctaacattcattctcttattgggttaaaacaatgtgggtcatatactttggaaatggaacc 13809170  T
Q  133 cacttaaaatggtgggacata 153  Q
    ||| |||||||||||||||||    
T  13809169 cacataaaatggtgggacata 13809149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 21232705 - 21232633
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||   ||||||||||||| ||| ||||||||| | ||||||||| |||||||||||||    
T  21232705 gaggaatgctagcaacaccctcttttgagcactttctttagcactcatttttttattgggtgaaatcaatgta 21232633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 37776886 - 37776814
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| |  ||||| | |||| |||| |||||||||||||||||| |||||||||||||||    
T  37776886 gaggaatgctagcaacactcacttttcaacactttctccagcactcactcttttattagatgaaatcaatgta 37776814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 38928196 - 38928120
Alignment:
Q  31 ataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||| ||||||||||||||| ||||||||| ||||| ||||||| | ||| ||||||||||| | |||||||||||    
T  38928196 ataaggggaatgctagcaacactatcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 38928120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 52951543 - 52951475
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 103  Q
    ||||| ||||||||||| | |||||| | |||||||||||||||||||||| | |||||||||||||||    
T  52951543 gaggagtgctagcaacactctctttttaacactctctctagcactcactctctcattggatgaaatcaa 52951475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 26007180 - 26007227
Alignment:
Q  406 aaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  26007180 aaggcttaattgcattttcccccctatagtttgtcaattgtgcgattt 26007227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 26310600 - 26310557
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  26310600 cactctctctagcacttactcttttattggatgaaatcaatgta 26310557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 43657156 - 43657107
Alignment:
Q  58 tttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  43657156 tttgagcactttctctagcactcactattttatttgatgaaatcaatgta 43657107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 46450064 - 46450134
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| |  ||||||| ||||||  |||||||||||||||||||| |||| ||||||||||    
T  46450064 gaggaatgctagcaacactcacttttgaacactct--ctagcactcactcttttattagatggaatcaatgta 46450134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 50661564 - 50661633
Alignment:
Q  83 tcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacat 152  Q
    ||||||||||| | |||||||||| || |||||| ||| |||||||||||||| |||| |||||||||||    
T  50661564 tcttttattgggttaaatcaatgtgggtcatacattttggaaatggaacccacataaagtggtgggacat 50661633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 40848518 - 40848566
Alignment:
Q  405 taaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  40848518 taaggcttaattgcacttttccccctatagtttgccaattgtgcgattt 40848566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 41451888 - 41452007
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    ||||| ||||||||||||| | |||||||| |||||||||||  ||||||||| ||||||| | |||||| ||| || | ||| ||||  |||| |||||    
T  41451888 aagagcaatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtc-tactctttgaaaattgaacc 41451986  T
Q  133 cacttaaaatggtgggacata 153  Q
    |||  ||| ||||||||||||    
T  41451987 cacacaaagtggtgggacata 41452007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 52124143 - 52124067
Alignment:
Q  31 ataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||||| |  ||||| | | ||||||||||||||||||  ||| ||||||||||| ||||||    
T  52124143 ataagaggaatgctagcaacactcactttttaacgctctctctagcactcacttatttgttggatgaaattaatgta 52124067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 138793 - 138832
Alignment:
Q  68 ctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  138793 ctctctagcactcactcttttattgaatgaaatcaatgta 138832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 24734891 - 24734773
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccc 133  Q
    |||| ||||||||||||| | |||||||| |||||||||||  ||||||||| ||||||| | |||||| ||| || | ||| ||||  |||| ||||||    
T  24734891 agagcaatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgt-gggcctactctttgaaaattgaaccc 24734793  T
Q  134 acttaaaatggtgggacata 153  Q
    ||  ||| ||||||||||||    
T  24734792 acacaaagtggtgggacata 24734773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 41707601 - 41707550
Alignment:
Q  56 cttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||| |||||||||| | ||||||| |||||||||||    
T  41707601 cttttgagcactctctctaacactcactctctcattggataaaatcaatgta 41707550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 347
Target Start/End: Original strand, 44064223 - 44064294
Alignment:
Q  276 ccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacct 347  Q
    |||||||||||||||| |||||  ||||||||||||||| ||| | ||||| |||||| |||||||| ||||    
T  44064223 ccatcatgggaaagttgaaccacaaccatagatttaatacttttttatttgaatggctaagatttatgacct 44064294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 407 - 453
Target Start/End: Original strand, 48159896 - 48159943
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  48159896 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 48159943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 24734700 - 24734770
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 103  Q
    ||||||||| ||||||||| |  ||||| | |||  ||||||| |||||||||||||||||||||||||||    
T  24734700 aagaggaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaa 24734770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 29389193 - 29389124
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||| |  ||||||||||||| || || |||||||||||| |||| || |||||||||||    
T  29389193 gaatgctagcaacactcacttttgagcactcactttaacactcactctttcattgaataaaatcaatgta 29389124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 42672978 - 42673023
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||    
T  42672978 ggcttaattgcacttttccccctatagtttgccaattgtgcgattt 42673023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 53687885 - 53687934
Alignment:
Q  405 taaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  53687885 taaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 53687934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 53688356 - 53688311
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||||    
T  53688356 ggcttaattgcactttctcccctatagtttgccaattgtgcgattt 53688311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 14236045 - 14236085
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaat 104  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  14236045 cactctctttagcactcactattttattggatgaaatcaat 14236085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 41452078 - 41452010
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 103  Q
    ||||||| ||||||||| |  ||||| | |||  ||||||| |||||||||||||||||||||||||||    
T  41452078 gaggaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaa 41452010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 106
Target Start/End: Original strand, 52951376 - 52951444
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgt 106  Q
    |||||||||||||| | |||||| | ||||||||| |  ||||||||| | ||||||||||||||||||    
T  52951376 gaatgctagcaacactctctttttaacactctctcaaatactcactctatcattggatgaaatcaatgt 52951444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 40849016 - 40848969
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  40849016 aggcttaattgcacttttcccctctatagtttgccaattgtgcgattt 40848969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 453
Target Start/End: Original strand, 42455789 - 42455836
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  42455789 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 42455836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 42780663 - 42780778
Alignment:
Q  31 ataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaa 130  Q
    ||||||||| |||||   ||| |||||||  | ||||||||||| |||||| ||| ||||||||||||||| ||||||| |  ||||||   |||||||     
T  42780663 ataagaggagtgctatggacactatctttctaacactctctctaacactcattctcttattggatgaaatccatgtaggtctcacacttagaaaatggat 42780762  T
Q  131 cccacttaaaatggtg 146  Q
    ||||| |||| |||||    
T  42780763 cccacataaagtggtg 42780778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 45515649 - 45515606
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||| | |||||||| |||||||||||||||||||||||    
T  45515649 cactctctccaacactcactattttattggatgaaatcaatgta 45515606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 8315136 - 8315090
Alignment:
Q  407 aggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| |||||||| |||| |||| ||||||||||||||    
T  8315136 aggcttaattgcactttcccccctatattttgtcaattgtgcgattt 8315090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 13809077 - 13809150
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||| ||||||||||||| | ||||||   ||||||||||| |  ||||||||||||||||| |||||||||||    
T  13809077 aagagaaatgctagcaacactctcttttacacactctctctaact-tcactcttttattggataaaatcaatgta 13809150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 30624633 - 30624700
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||| |  ||||||||||||||||  | ||||||||||||||||| || |||| ||||||    
T  30624633 gaatgctagcaacactcacttttgagcactctct--aacactcactcttttattgaataaaattaatgta 30624700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 46575943 - 46576017
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||| ||||| | ||| || | ||||||||| | |||||||||| ||||||| ||||| |||||||    
T  46575943 aagaggaatgctatcaacactctctcttcaacactctctcaaacactcactctcttattggctgaaaccaatgta 46576017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 47666389 - 47666343
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  47666389 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattt 47666343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 48160387 - 48160341
Alignment:
Q  408 ggcttaattgcattttcccccg-tatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||    
T  48160387 ggcttaattgcactttccccccctatagtttgccaattgtgcgattt 48160341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 52123955 - 52124068
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccactta 138  Q
    ||||||||||||| | |||||||| |||||||||||  ||||||| | ||||||| | |||||| ||| || | ||||||||  |||| |||||| |  |    
T  52123955 aatgctagcaacactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgtgggtc-tacactttgaaaattgaacccccaca 52124053  T
Q  139 aaatggtgggacata 153  Q
    |||| ||||||||||    
T  52124054 aaatagtgggacata 52124068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 3353128 - 3353173
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  3353128 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattt 3353173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 24485513 - 24485468
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||| | || ||||||||||||||||||||||||    
T  24485513 ggcttaattgcacttttctccctatagtttgccaattgtgcgattt 24485468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 29388585 - 29388646
Alignment:
Q  31 ataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattg 92  Q
    ||||||||||||||| ||| ||| | |||||| ||||||||||| ||| |||||| ||||||    
T  29388585 ataagaggaatgctatcaatattttattttgaacactctctctaacacccactctcttattg 29388646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 39185263 - 39185308
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgtagg 109  Q
    |||||||| ||||||||||| ||||||| || ||||||||||||||    
T  39185263 cactctctttagcactcactattttatttgaagaaatcaatgtagg 39185308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 42673349 - 42673304
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  42673349 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattt 42673304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 50661700 - 50661635
Alignment:
Q  40 atgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatg 105  Q
    |||| ||||||| | |||||| | ||||||||||| |||| ||||||||||| ||| |||||||||    
T  50661700 atgcaagcaacactctcttttaaacactctctctaacacttactcttttattagataaaatcaatg 50661635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 13639428 - 13639464
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaat 100  Q
    ||||||||||| || ||||||||||||||||||||||    
T  13639428 cactctctctaacagtcactcttttattggatgaaat 13639464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 40716041 - 40715973
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||| |||||||| |  ||||| | |||||||||||||||||||||||||||  | |||||| ||||||    
T  40716041 aatgttagcaacactcacttttcaacactctctctagcactcactcttttatatggtgaaattaatgta 40715973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 43657040 - 43657108
Alignment:
Q  85 ttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    ||||||| | ||||| ||||||  ||| |||||||| |||||||||| ||| |||| ||||||||||||    
T  43657040 ttttatttggtgaaaacaatgtgagacctacactttggaaatggaactcacataaagtggtgggacata 43657108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 50320594 - 50320534
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaa 99  Q
    |||||||| |||| | |||||  ||||||||||||| ||||||||||| ||||| ||||||    
T  50320594 aatgctaggaacactttctttctagcactctctctaacactcactcttctattgaatgaaa 50320534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 7e-53; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 278 - 407
Target Start/End: Original strand, 7423522 - 7423651
Alignment:
Q  278 atcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttatataaaacaa 377  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||    
T  7423522 atcatgggaaagttaaaccaagaccatagatttaatactttttaatttggatggctcatattcattacctgttaactttttgatgggttatataaaacaa 7423621  T
Q  378 aaattgtgaccccacctcataattaaataa 407  Q
    ||||||||||||||||||||||||||||||    
T  7423622 aaattgtgaccccacctcataattaaataa 7423651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 281 - 407
Target Start/End: Complemental strand, 25877617 - 25877491
Alignment:
Q  281 atgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttatataaaacaaaaa 380  Q
    |||| |||||||||||||| |||||||||||||| ||| |||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||    
T  25877617 atggaaaagttaaaccaaggccatagatttaatactttttaatttggatggctcagattcattacctgttaattttttgatgggttatataaaacaaaaa 25877518  T
Q  381 ttgtgaccccacctcataattaaataa 407  Q
    |||||||||||||| ||||||||||||    
T  25877517 ttgtgaccccaccttataattaaataa 25877491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 35 - 153
Target Start/End: Original strand, 13407318 - 13407436
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||||||||||||||| | |||||||| ||||||||||| |||||| ||| | ||||| | |||||||||| || ||||||||||  |||| |||||||    
T  13407318 gaggaatgctagcaacactctcttttgaacactctctctaacactcattctctcattgggttaaatcaatgtgggtcatacactttgaaaatagaaccca 13407417  T
Q  135 cttaaaatggtgggacata 153  Q
    |||||||||||||||||||    
T  13407418 cttaaaatggtgggacata 13407436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 35689666 - 35689548
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||||||||| |  || | ||||||||||||||||||||||||||||| ||||||||| ||||| |||||| |||| ||||||||  ||||||||| ||    
T  35689666 gaggaatgctaacggcactctcttttgagcactctctctagcactcacttttttattgggtgaaaacaatgtgggacttacactttgaaaatggaactca 35689567  T
Q  135 cttaaaatggtgggacata 153  Q
    | |||| ||||||||||||    
T  35689566 cataaagtggtgggacata 35689548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 33417839 - 33417751
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacat 152  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||| |||||| ||||||| |||| |||||| ||||    
T  33417839 cactctctctagcactcactcttttattgagtgaaattaatgtaggacctacactttggaaatgaaacccacataaagtggtggaacat 33417751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 1205991 - 1205895
Alignment:
Q  57 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    |||||| |||||||| ||||||||||||||||||||  ||||||||||||| ||| |||||||| ||||| |||||||  |||| ||||| ||||||    
T  1205991 ttttgaacactctctttagcactcactcttttattgagtgaaatcaatgtaagacctacactttggaaatagaacccatataaagtggtgagacata 1205895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 32072098 - 32072166
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||  ||||| | ||||||||||||||||||||||||||||||||||||| ||||||    
T  32072098 aatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatgaatgta 32072166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 35689497 - 35689549
Alignment:
Q  55 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35689497 tcttttgagcactctctctagcactcacttttttattggatgaaatcaatgta 35689549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 34303431 - 34303550
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccc 133  Q
    ||||||| |||||||||||  |||||| ||||  |||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||  |||| ||| ||    
T  34303431 agaggaaagctagcaacatcctcttttaagcatcctctctagcactaactcttttattgggtgaaatcaatgtaagacctacactttgaaaatcgaagcc 34303530  T
Q  134 acttaaaatggtgggacata 153  Q
    || || | ||||| ||||||    
T  34303531 acatagagtggtgagacata 34303550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 6387747 - 6387629
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||| ||||||||||| |  ||||||  ||||||||||| |||||| ||| ||||||| | ||| |||||| || | || ||||| |||||||||||||    
T  6387747 gaggattgctagcaacaatcccttttggacactctctctaacactcattctcttattgggttaaaacaatgtgggtcgtatactttggaaatggaaccca 6387648  T
Q  135 cttaaaatggtgggacata 153  Q
    | |||||||||||||||||    
T  6387647 cataaaatggtgggacata 6387629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 28211885 - 28211998
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccactta 138  Q
    |||| |||||||| | ||||||||||| | | |||| || ||||  ||||||||| ||||||||||||||||| || |||||| ||||||||||||| ||    
T  28211885 aatgttagcaacactctcttttgagcattatttctaacattcaca-ttttattgggtgaaatcaatgtaggacctatactttaaaaatggaacccacata 28211983  T
Q  139 aaatggtgggacata 153  Q
    |||||||| ||||||    
T  28211984 aaatggtgagacata 28211998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 7599606 - 7599533
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||| |||||||| | | |||||| |||||||||||||||  |||||||||||||||||||||||||||    
T  7599606 agaggaatgttagcaacactcttttttgaacactctctctagcacctactcttttattggatgaaatcaatgta 7599533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 149
Target Start/End: Original strand, 7599423 - 7599530
Alignment:
Q  42 gctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaa 141  Q
    |||||||||| | | ||||||||| ||| |||| |||||||| ||||||||  | ||||||||||||||| |||||||| |||| ||||||||| ||||     
T  7599423 gctagcaacactcttttttgagcattctttctaacactcacttttttattgagtaaaatcaatgtaggacctacactttggaaaaggaacccacataaag 7599522  T
Q  142 tggtggga 149  Q
    || |||||    
T  7599523 tgctggga 7599530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 1977358 - 1977284
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| | |  ||||| | ||||||||||||||||||||||| | ||||||||||||||||||    
T  1977358 aagaggaatgctagcaatactcactttttaacactctctctagcactcactcttctgttggatgaaatcaatgta 1977284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 8914766 - 8914840
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||| |  ||||||||| ||||||||| |||||||||||| ||||||| ||| |||||||    
T  8914766 aagaggaatgctagcaacactcacttttgagcgctctctctaacactcactctttcattggataaaaccaatgta 8914840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 147
Target Start/End: Original strand, 23142811 - 23142921
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccc 133  Q
    |||||||||||||||||| | |||||||||||  |||||||||| ||| | ||||||||| ||||| |||||| | || || ||||| ||||||||||||    
T  23142811 agaggaatgctagcaacactctcttttgagca--ctctctagcattca-ttttttattgggtgaaaacaatgtggaacctagactttggaaatggaaccc 23142907  T
Q  134 acttaaaatggtgg 147  Q
    || |||| ||||||    
T  23142908 acataaagtggtgg 23142921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 23685131 - 23685200
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||  ||||||  ||||||||  |||||||||| |||||||||||||||||||||||    
T  23685131 gaatgctagcaacattcacttttgcacactctcttaagcactcactattttattggatgaaatcaatgta 23685200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 1205829 - 1205880
Alignment:
Q  40 atgctagcaacattatcttttgagcactctctctagcactcactcttttatt 91  Q
    |||||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  1205829 atgctagcaacactctcttttgagcactctctttagcactcactcttttatt 1205880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 34861337 - 34861298
Alignment:
Q  68 ctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34861337 ctctctagcactcactcttttattggatgaaatcaatgta 34861298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 9952936 - 9952870
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatg 105  Q
    |||||||| ||||||  ||||| | |||||||||||||||||| | |||||||||||||||||||||    
T  9952936 aatgctagtaacatttacttttcaacactctctctagcactcatttttttattggatgaaatcaatg 9952870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 146
Target Start/End: Original strand, 12212126 - 12212230
Alignment:
Q  42 gctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaa 141  Q
    |||||||||| | |||||| | || |||||||| || |||||||||| |||| |||||||||||| || | |||||||| |||||||  ||||| ||||     
T  12212126 gctagcaacactctcttttcaacattctctctaacattcactcttttcttgggtgaaatcaatgtgggtcctacactttggaaatgggtcccacataaag 12212225  T
Q  142 tggtg 146  Q
    |||||    
T  12212226 tggtg 12212230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 146
Target Start/End: Original strand, 12456554 - 12456658
Alignment:
Q  42 gctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaa 141  Q
    |||||||||| | |||||| | || |||||||| || |||||||||| |||| |||||||||||| || | |||||||| |||||||  ||||| ||||     
T  12456554 gctagcaacactctcttttcaacattctctctaacattcactcttttcttgggtgaaatcaatgtgggtcctacactttggaaatgggtcccacataaag 12456653  T
Q  142 tggtg 146  Q
    |||||    
T  12456654 tggtg 12456658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 13856578 - 13856506
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||| |||||   ||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  13856578 gaggaatgctagtaacatccacttctcaacactctctctaacacccactcttttattggatgaaatcaatgta 13856506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 41662519 - 41662567
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  41662519 aaggcttaattgcacttttcccccatatagtttgccaattgtgcgattt 41662567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 6387559 - 6387630
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||| ||||||||||||| | |||||||  ||||||||  | |||||||||||||||||||| |||||||||||    
T  6387559 agagaaatgctagcaacactctcttttggacactctct--aacactcactcttttattggataaaatcaatgta 6387630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 31301110 - 31301184
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||  |||| |  ||||||| |||| | ||  |||||||||||||||||||||||||||||||||    
T  31301110 aagaggaatgctaataacactcacttttgaacactatttccggcactcactcttttattggatgaaatcaatgta 31301184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 37397199 - 37397153
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  37397199 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 37397153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 28414049 - 28413980
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||| ||||| |  ||||| | ||||||||||||| |||||| ||||||| |||||||||||||||    
T  28414049 gaatgctaacaacactcacttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgta 28413980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 44709297 - 44709342
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgtagg 109  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||    
T  44709297 cactctctctaacactcactcttttattgtgtgaaatcaatgtagg 44709342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 16983390 - 16983458
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatca 102  Q
    |||||||||||||||||| |  ||||| | |||||| |||||||||||||  |||||||||| ||||||    
T  16983390 agaggaatgctagcaacactcacttttcaacactctatctagcactcactgatttattggataaaatca 16983458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 16983580 - 16983512
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatca 102  Q
    |||| ||||||||||||| | |||||||| |||||||||||  ||||||||| ||||||| | ||||||    
T  16983580 agagtaatgctagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatca 16983512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 17431285 - 17431333
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  17431285 aaggcttaattgcacttttcccccatatagtttgtcaattgtgcgattt 17431333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 17499387 - 17499347
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaat 104  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  17499387 cactctctctagcactctatcttttattggatgaaatcaat 17499347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 453
Target Start/End: Original strand, 25438794 - 25438838
Alignment:
Q  410 cttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||    
T  25438794 cttaattgcacttttcccccctatagtttgccaattgtgcgattt 25438838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 35151912 - 35151840
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||| ||||||||| |  ||||| | |||||| | ||||| | |||||||||||||||||||||||||||    
T  35151912 gaggaatactagcaacactcactttttaacactctttttagcatttactcttttattggatgaaatcaatgta 35151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 37396702 - 37396754
Alignment:
Q  402 aaataaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||| ||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  37396702 aaattaggcttaattgcacttttcccccctatagtttgccgattgtgcgattt 37396754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 5979878 - 5979949
Alignment:
Q  36 aggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||| |  ||||| | |||||||||||| |  ||||||| |||||||||| |||||||||    
T  5979878 aggaatgctagcaacacttacttttcaacactctctctagtagacactcttctattggatgagatcaatgta 5979949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 104
Target Start/End: Complemental strand, 23142984 - 23142937
Alignment:
Q  57 ttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    |||||||||||||||| |||||| ||| ||||||||| ||||||||||    
T  23142984 ttttgagcactctctcaagcacttacttttttattgggtgaaatcaat 23142937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 31691692 - 31691625
Alignment:
Q  37 ggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||||||||||||| |  |||||||  ||||||| || ||||||||||||||||| | |||||||||    
T  31691692 ggaatgctagcaacactcacttttgaaaactctctttaacactcactcttttattgaacgaaatcaat 31691625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 34498610 - 34498563
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  34498610 aggcttaattgcacttttcccccctatagtttgcaaattgtgcgattt 34498563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 45246460 - 45246503
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||    
T  45246460 cactctctttagcactcactattttattggataaaatcaatgta 45246503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 13407509 - 13407435
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||  ||||||| | | |||||  ||||||||||| |||| ||| ||||||||||| |||||||||||    
T  13407509 aagaggaatgtcagcaacactcttttttggacactctctctaacactaacttttttattggataaaatcaatgta 13407435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 25915188 - 25915146
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgt 106  Q
    ||||||| |||| ||||||||||||||||| ||||||||||||    
T  25915188 cactctccctagtactcactcttttattgggtgaaatcaatgt 25915146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 35797426 - 35797464
Alignment:
Q  69 tctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  35797426 tctctagcattcactcttttattggataaaatcaatgta 35797464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 38091538 - 38091488
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcact 83  Q
    ||||||||||||||||||||| |||||| | ||||||||| | ||||||||    
T  38091538 aagaggaatgctagcaacattctcttttcaacactctctccaacactcact 38091488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 109
Target Start/End: Original strand, 16441830 - 16441875
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgtagg 109  Q
    ||||||||||| |||||||||||||||||  ||||||| |||||||    
T  16441830 cactctctctaacactcactcttttattgagtgaaatctatgtagg 16441875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 453
Target Start/End: Complemental strand, 20861699 - 20861646
Alignment:
Q  401 taaataaggcttaattgcattttc-ccccgtatagtttgccaattgtgcgattt 453  Q
    |||| ||||||||||||||||||  |||| |||||| |||||||||||||||||    
T  20861699 taaacaaggcttaattgcattttttccccctatagtctgccaattgtgcgattt 20861646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 43026412 - 43026359
Alignment:
Q  100 tcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    |||||||||||| |||||||| |||||||||||||| |||| |||  |||||||    
T  43026412 tcaatgtaggacctacactttggaaatggaacccacataaagtggcaggacata 43026359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 105
Target Start/End: Complemental strand, 45218667 - 45218630
Alignment:
Q  68 ctctctagcactcactcttttattggatgaaatcaatg 105  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  45218667 ctctctaacactcgctcttttattggatgaaatcaatg 45218630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 6199156 - 6199104
Alignment:
Q  402 aaataaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||| ||||||||||||| |||||  || ||||||||||||||||||||||||    
T  6199156 aaattaggcttaattgcacttttcttccctatagtttgccaattgtgcgattt 6199104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 12281122 - 12281170
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| |||  |||||||||||||||||||    
T  12281122 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattt 12281170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 16441991 - 16441919
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgt 106  Q
    |||||| |||||  || ||| |||||| | |||| ||| || |||||||||||||| ||||||||||||||||    
T  16441991 agaggagtgctaagaatattctcttttcaacactatctataacactcactcttttactggatgaaatcaatgt 16441919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 17499229 - 17499345
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccc 133  Q
    |||| ||||||||||||| |  |||||||  ||||||||||  ||||||||| ||||||| | |||||| ||| |||  ||||||||  |||| |||||     
T  17499229 agagtaatgctagcaacact--cttttgacaactctctctaatactcactctcttattggtttaaatcattgt-ggatctacactttgaaaattgaacca 17499325  T
Q  134 acttaaaatggtgggacata 153  Q
    ||  ||||||||||||||||    
T  17499326 acacaaaatggtgggacata 17499345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 24473824 - 24473776
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| |||||  || ||||||||||||||||||||||||    
T  24473824 aaggcttaattgcacttttcatccctatagtttgccaattgtgcgattt 24473776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 39023459 - 39023499
Alignment:
Q  67 tctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||| |  ||||||||||||||||||||||    
T  39023459 tctctctagcactcatttatttattggatgaaatcaatgta 39023499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 41727427 - 41727499
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||  ||||| |  ||||||| |||||||| ||||| |||||||||| || ||| |||||||||||    
T  41727427 gaggaatgctgacaacactcacttttgaacactctctttagcaatcactcttttgttagataaaatcaatgta 41727499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 43026287 - 43026360
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||| | ||||||||||||| |||||| | ||||||  |||||||||||| ||||||| | | |||||||||||    
T  43026287 taagagaagtgctagcaacattctcttttaaacactct--ctagcactcacttttttattaggtaaaatcaatgta 43026360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 43506532 - 43506604
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||||| |  |||||||  || ||||||| |||||||| |||||||||||  ||||||||||    
T  43506532 taagaggaatgctagcaacactcacttttga--acactctctaacactcact-ttttattggatataatcaatgta 43506604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 3e-52; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 242 - 407
Target Start/End: Original strand, 279545 - 279710
Alignment:
Q  242 ggtgccgtttaatttgggaaagcaaacnnnnnnnccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagattta 341  Q
    |||||| |||||||||||||| || ||       |||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| |    
T  279545 ggtgccatttaatttgggaaaacatactttttttccatcacgggaaagttaaaccaagaccatagatttaatactttttaatttggatgactcagattca 279644  T
Q  342 ttacctgctaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataa 407  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  279645 ttacctgttaactttttgatgggttatataaaacaaaaattgtgaccccacctcataattaaataa 279710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 35 - 153
Target Start/End: Original strand, 19090209 - 19090327
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||| |||||||||||||    
T  19090209 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattggttgaattcaatgtaggacctacactttggaaatggaaccca 19090308  T
Q  135 cttaaaatggtgggacata 153  Q
    | |||| ||||||||||||    
T  19090309 cataaagtggtgggacata 19090327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 10061047 - 10060927
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    |||||||||  |||||||| | |||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||| ||||||||  ||||||||||    
T  10061047 aagaggaatattagcaacactctcttttgagcactctctctaacactcacttttttattgggtgagatcaatgtaggacctacactttgaaaatggaacc 10060948  T
Q  133 cacttaaaatggtgggacata 153  Q
    ||| |||| ||| ||||||||    
T  10060947 cacataaagtggcgggacata 10060927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 19737431 - 19737534
Alignment:
Q  37 ggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccact 136  Q
    ||||||||||||||| | |||||||| || |||||||| |||||||||||||||||| | ||||||||||||||| |||||||| |||||| |||||||     
T  19737431 ggaatgctagcaacactctcttttgaacattctctctatcactcactcttttattggctcaaatcaatgtaggacctacactttggaaatgaaacccaca 19737530  T
Q  137 taaa 140  Q
    ||||    
T  19737531 taaa 19737534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 19090402 - 19090326
Alignment:
Q  31 ataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  19090402 ataagaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgta 19090326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 6531482 - 6531409
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||| |||||||||||||    
T  6531482 agaggaatgctagcaacactctcttttgaggactctctccagcactcactcttttattgggtgaaatcaatgta 6531409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 35128724 - 35128835
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccactt 137  Q
    |||||||| ||||| | ||||||||||    |||||| |||||| | ||||||||| ||||||||||||||||| ||||||||  ||||||||||||| |    
T  35128724 gaatgctaacaacactctcttttgagc----tctctaacactcatttttttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacat 35128819  T
Q  138 aaaatggtgggacata 153  Q
    ||| ||||||||||||    
T  35128820 aaagtggtgggacata 35128835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 373395 - 373468
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||| ||||||| | |||||||||||||||||||||| |||| ||||||||| | |||||||||||    
T  373395 agaggaatgctaacaacattcttttttgagcactctctctagcacccacttttttattgggtaaaatcaatgta 373468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 9940387 - 9940445
Alignment:
Q  67 tctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaa 125  Q
    ||||||||||||||||||||||||||| ||||||||||||||||  |||||||| ||||    
T  9940387 tctctctagcactcactcttttattgggtgaaatcaatgtaggatttacactttggaaa 9940445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 19737596 - 19737546
Alignment:
Q  57 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  19737596 ttttgagcactctctctagcactcactctttaattgggtgaaatcaatgta 19737546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 107
Target Start/End: Complemental strand, 35128900 - 35128834
Alignment:
Q  41 tgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||| | |||||||| |||||||||||||| ||||||||||||||| | |||||||||||    
T  35128900 tgctagcaacactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgta 35128834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 373556 - 373467
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    ||||||||||| |||| ||| ||||||||||| ||||||||||||||| ||| ||||  |||||||| |||| |||| || |||||||||    
T  373556 cactctctctaacacttactattttattggataaaatcaatgtaggacctaccctttgaaaatggaatccacataaagtgctgggacata 373467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 21987292 - 21987361
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||| |||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  21987292 gaatgctaacaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgta 21987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 34905332 - 34905405
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||| ||||||||||||| |   |||| | ||||||||||| ||||||||||||||||||||||||||||||||    
T  34905332 agagaaatgctagcaacactcatttttcaacactctctctaacactcactcttttattggatgaaatcaatgta 34905405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 4595922 - 4595829
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||||||||||| | ||||||||| ||||| |  ||||||||||||||| || | |||||| |||||||||| ||||||||  ||||||||||||    
T  4595922 aatgctagcaacactctcttttgagaactcttt--agcactcactcttttctttggtgaaattaatgtaggacttacactttgaaaatggaaccca 4595829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 445815 - 445887
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||| | |   |||| | |||| ||||||||||||||| |||||||||||||||||||||||    
T  445815 gaggaatgctagcaatactcatttttcaacactatctctagcactcacttttttattggatgaaatcaatgta 445887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 4595768 - 4595811
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||||||||||||||  |||||||||||||    
T  4595768 cactctctctagcactcactcttttattgagtgaaatcaatgta 4595811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 6992304 - 6992383
Alignment:
Q  74 agcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    |||||||| ||||||||||  | ||||||||||||||| |||||||| |||||| ||| ||| |||| ||||| ||||||    
T  6992304 agcactcattcttttattgagtaaaatcaatgtaggacctacactttggaaatgaaactcacataaagtggtgagacata 6992383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 8442024 - 8441953
Alignment:
Q  31 ataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatca 102  Q
    |||||||||||||||||| || |   |||| | ||||||||||| ||||||||| |||||||||||||||||    
T  8442024 ataagaggaatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaatca 8441953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 8450828 - 8450757
Alignment:
Q  31 ataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatca 102  Q
    |||||||||||||||||| || |   |||| | ||||||||||| ||||||||| |||||||||||||||||    
T  8450828 ataagaggaatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaatca 8450757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 17226712 - 17226645
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatca 102  Q
    ||||||| ||| ||||| | |||| ||| |||||||| ||||| ||||||||||||||||||||||||    
T  17226712 gaggaatactaacaacactctcttctgaacactctctttagcattcactcttttattggatgaaatca 17226645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 29074427 - 29074380
Alignment:
Q  406 aaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||  |||||||| ||||||||||||||||||||||||    
T  29074427 aaggcttaattgctctttcccccctatagtttgccaattgtgcgattt 29074380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 29079191 - 29079144
Alignment:
Q  406 aaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||  |||||||| ||||||||||||||||||||||||    
T  29079191 aaggcttaattgctctttcccccctatagtttgccaattgtgcgattt 29079144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 29107000 - 29106953
Alignment:
Q  406 aaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||  |||||||| ||||||||||||||||||||||||    
T  29107000 aaggcttaattgctctttcccccctatagtttgccaattgtgcgattt 29106953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 31116286 - 31116235
Alignment:
Q  56 cttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||| ||||||||||| || |||||||| ||||||||||||||||||||    
T  31116286 cttttgaacactctctctaacattcactcttctattggatgaaatcaatgta 31116235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 10060854 - 10060928
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||| | |||||||| |||||| | || || |||||||||||||   |||||||||||||    
T  10060854 aagaggaatgctagcaacactctcttttgaacactctttataacaatcactcttttattatgtgaaatcaatgta 10060928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 33974353 - 33974307
Alignment:
Q  408 ggcttaattgcatttt-cccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  33974353 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattt 33974307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 7654604 - 7654556
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  7654604 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 7654556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 12794850 - 12794922
Alignment:
Q  77 actcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtggga 149  Q
    ||||| |||||||||||||||||| |||||||||| |||| |||  ||||| ||| ||| |||| ||||||||    
T  12794850 actcattcttttattggatgaaattaatgtaggacctacattttgaaaatgaaactcacataaagtggtggga 12794922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 12327359 - 12327316
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||| |||||||||||||||||  ||||||||||    
T  12327359 cactctctctagcagtcactcttttattggatagaatcaatgta 12327316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 12488231 - 12488156
Alignment:
Q  31 ataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgt 106  Q
    |||| |||||||||||  ||| |||| ||| | |||| | ||||  ||||||||||||||||||||||||||||||    
T  12488231 ataacaggaatgctagggacactatcatttcaacactttttctaatactcactcttttattggatgaaatcaatgt 12488156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 10087912 - 10087866
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||||    
T  10087912 ggcttaattgcacttttcccccctttagtttgccaattgtgcgattt 10087866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 34905525 - 34905404
Alignment:
Q  31 ataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaa 130  Q
    |||||||  |||||||||||| | |||||||| ||| |||||||  ||||||||| ||||||| | |||||| ||| || | ||||||||  |||| |||    
T  34905525 ataagagtgatgctagcaacactctcttttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtc-tacactttgaaaattgaa 34905427  T
Q  131 cccacttaaaatggtgggacata 153  Q
    ||||   ||| ||||||||||||    
T  34905426 cccaaacaaagtggtgggacata 34905404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 12753943 - 12753878
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaat 100  Q
    ||||||||||||||||| |  ||||||| |||||| | ||||| ||||||||| ||||||| ||||    
T  12753943 gaggaatgctagcaacactcacttttgaacactctttatagcaatcactctttcattggataaaat 12753878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 22684411 - 22684366
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||| |||| |||||||||||||||||| |||||    
T  22684411 ggcttaattgcacttttccccttatagtttgccaattgtgtgattt 22684366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 22754657 - 22754702
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||| |||| |||||||||||||||||| |||||    
T  22754657 ggcttaattgcacttttccccttatagtttgccaattgtgtgattt 22754702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 10133312 - 10133276
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaat 100  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  10133312 cactctctctaacactcactcatttattggatgaaat 10133276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 7e-50; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 242 - 407
Target Start/End: Complemental strand, 42545611 - 42545446
Alignment:
Q  242 ggtgccgtttaatttgggaaagcaaacnnnnnnnccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagattta 341  Q
    |||||| ||||||||||||||| | ||       ||||||| ||||||||||||||||  ||||||||||||| ||| |||||||||||||||||||| |    
T  42545611 ggtgccatttaatttgggaaagtacacttttttcccatcataggaaagttaaaccaaggtcatagatttaatactttttaatttggatggctcagattca 42545512  T
Q  342 ttacctgctaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataa 407  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42545511 ttacctgttaactttttgatgggttatataaaacaaaaattgtgaccccacctcataattaaataa 42545446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 244 - 383
Target Start/End: Original strand, 36513999 - 36514138
Alignment:
Q  244 tgccgtttaatttgggaaagcaaacnnnnnnnccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttatt 343  Q
    |||||||||||||||||||||||||       |||||||   |||||||||||||  |||||||||||||| |||| |||||| |||| |||||||||||    
T  36513999 tgccgtttaatttgggaaagcaaacttttttcccatcataaaaaagttaaaccaaagccatagatttaatactttaaaatttgaatggttcagatttatt 36514098  T
Q  344 acctgctaactttttgttgggttatataaaacaaaaattg 383  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  36514099 acctgttaactttttgttgggttatataaaacaaaaattg 36514138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 44832650 - 44832531
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccc 133  Q
    |||||||||||||||||| | |||||||||||||||||| |||||||| | ||||||||| ||||||||||||||||| | |||||| ||||||||| ||    
T  44832650 agaggaatgctagcaacactctcttttgagcactctctccagcactcatttttttattgggtgaaatcaatgtaggacctgcactttggaaatggaatcc 44832551  T
Q  134 acttaaaatggtgggacata 153  Q
    || |||||||||||||||||    
T  44832550 acataaaatggtgggacata 44832531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 51206228 - 51206111
Alignment:
Q  36 aggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccac 135  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||  ||||| ||| |||    
T  51206228 aggaatactagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtaggacctacattttgaaaatgaaactcac 51206129  T
Q  136 ttaaaatggtgggacata 153  Q
     |||| || |||||||||    
T  51206128 ataaagtgatgggacata 51206111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 276 - 407
Target Start/End: Complemental strand, 54117182 - 54117051
Alignment:
Q  276 ccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttatataaaac 375  Q
    |||| |||||||||||||| || || ||| ||| ||||| ||| ||||||||| |||| |||| | | ||||| |||||||||| |||||||||||||||    
T  54117182 ccatgatgggaaagttaaagcatgatcattgatataatactttttaatttggacggctgagatgtgtgacctgttaactttttgatgggttatataaaac 54117083  T
Q  376 aaaaattgtgaccccacctcataattaaataa 407  Q
    |||||  |||||||||||||||||||||||||    
T  54117082 aaaaacagtgaccccacctcataattaaataa 54117051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 16178740 - 16178651
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||| ||||||||||||    
T  16178740 cactctctctaactctcactcttttattggatgaaatcaatgtagaacctacactttggaaatggaacccacataaagtggtgggacata 16178651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 39016851 - 39016731
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    ||||| |||| |||||||| | |||||||| |||||||||||||||| ||||||||||| | | ||||||||||||    |||||||| |||||||||||    
T  39016851 aagagaaatgttagcaacactctcttttgaacactctctctagcacttactcttttattaggtaaaatcaatgtagatactacactttggaaatggaacc 39016752  T
Q  133 cacttaaaatggtgggacata 153  Q
    ||| |||||||||||||||||    
T  39016751 cacgtaaaatggtgggacata 39016731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 42862414 - 42862533
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccc 133  Q
    |||||||||||||||||| | ||||||||||||| | ||||||||||||||||||||||| |||||||||| || |    |||||||  |||||||||||    
T  42862414 agaggaatgctagcaacactctcttttgagcactatatctagcactcactcttttattgggtgaaatcaatttatgtttcacactttgaaaatggaaccc 42862513  T
Q  134 acttaaaatggtgggacata 153  Q
    || |||| ||||||||||||    
T  42862514 acataaagtggtgggacata 42862533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 281 - 407
Target Start/End: Complemental strand, 25891991 - 25891865
Alignment:
Q  281 atgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttatataaaacaaaaa 380  Q
    |||||||||||||| || | | || ||| ||||| ||| |||||||| || ||||||| | | ||||| |||||||||| ||||||||||||||||||||    
T  25891991 atgggaaagttaaagcatggcaattgatataatactttttaatttgggtgactcagatgtgtgacctgttaactttttgatgggttatataaaacaaaaa 25891892  T
Q  381 ttgtgaccccacctcataattaaataa 407  Q
     |||||||||||||| |||||||||||    
T  25891891 ctgtgaccccacctcgtaattaaataa 25891865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 13070126 - 13070008
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||| ||||||||||| | |||||||| || | |||||| |||||||||||||||||  | ||||||||||||||| ||||||||  ||||||||||||    
T  13070126 gaggagtgctagcaacactctcttttgaacattttctctaacactcactcttttattgagtaaaatcaatgtaggacctacactttgaaaatggaaccca 13070027  T
Q  135 cttaaaatggtgggacata 153  Q
    | |||| |||||| |||||    
T  13070026 cataaagtggtggaacata 13070008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 37315748 - 37315628
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    |||| |||||||||||||| | | ||||||||||||||  ||||||||||||||||||||| |||||||||||||| || ||| ||||  ||||| |||     
T  37315748 aagatgaatgctagcaacactcttttttgagcactctcattagcactcactcttttattgggtgaaatcaatgtagaacctacgctttgaaaatgaaact 37315649  T
Q  133 cacttaaaatggtgggacata 153  Q
     || |||| ||||||||||||    
T  37315648 tacataaagtggtgggacata 37315628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 32 - 152
Target Start/End: Original strand, 2187805 - 2187924
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaac 131  Q
    ||||| |||||||||||||| |  ||||||||||||||||||| |||||| | ||||||||  ||||| |||||| |||| |||||||| ||||  ||||    
T  2187805 taagacgaatgctagcaacactcgcttttgagcactctctctaacactcatttttttattgtgtgaaaacaatgtgggacctacacttt-gaaaatgaac 2187903  T
Q  132 ccacttaaaatggtgggacat 152  Q
    |||| |||| |||||||||||    
T  2187904 ccacataaagtggtgggacat 2187924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 47237923 - 47237855
Alignment:
Q  36 aggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    |||||||||| ||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  47237923 aggaatgctatcaacactctcttttgaacactctctctagcattcactcttttattggatgaaatcaat 47237855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 30866930 - 30867044
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccactta 138  Q
    ||||||||||||  | |||||| | |||||||||||||||||| | ||||||| | ||||| |||||| |||  ||||||||  ||||||||||||| ||    
T  30866930 aatgctagcaacgctctcttttaaacactctctctagcactcatttttttattaggtgaaaacaatgtgggatctacactttgaaaatggaacccacata 30867029  T
Q  139 aaatggtgggacata 153  Q
    || ||||||||||||    
T  30867030 aagtggtgggacata 30867044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 40812033 - 40812103
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||| |||||||||||| | | |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  40812033 agaggtatgctagcaacactcttttttgaacactctctctagcactcactcttttattgggtgaaatcaat 40812103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 42862605 - 42862532
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||  |||| | ||||||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  42862605 agaggaatgctaataacactctcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgta 42862532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 8108957 - 8109025
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||| |  ||||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  8108957 aatgctagcaacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgta 8109025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 13069938 - 13070009
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||| || | | |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  13069938 gaggaatgctaggaatactctcttttgagcacactctctagcactcactcttttattgg-tgaaatcaatgta 13070009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 34129586 - 34129511
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||| ||||||||||  ||||| |  |||||||||||||||||||||| |||||||||| |||||||||    
T  34129586 taagaggaatggtagcaacattcacttttcaaaactctctctagcactcactcttctattggatgagatcaatgta 34129511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 40991774 - 40991703
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||||||||||||||||| |  ||||| | ||||||||||| |||||||||||| ||||||||||||||||    
T  40991774 aagaggaatgctagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaat 40991703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 302 - 369
Target Start/End: Original strand, 54713027 - 54713094
Alignment:
Q  302 catagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttata 369  Q
    |||||||||||||  ||||||||||||||| |||||||||||| ||| |||||||||||||| |||||    
T  54713027 catagatttaatacattataatttggatggttcagatttattatctgttaactttttgttggattata 54713094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 39016658 - 39016732
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||| ||||||||||||||| |||||| | |||||||| || |||| ||| |||||||||||||||||||||||    
T  39016658 aagagaaatgctagcaacattctcttttaaacactctctataacacttactattttattggatgaaatcaatgta 39016732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 50571859 - 50571933
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||| |||||||| |  ||||| | |||||||||||||||| ||||||||||| |||||||||||||||    
T  50571859 aagaggaatgttagcaacagtcacttttcaacactctctctagcacttactcttttattagatgaaatcaatgta 50571933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 43771126 - 43771195
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||| |||||||| |  ||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  43771126 gaatggtagcaacactcacttttgaacactctctctatgactcactcttttattggatgaaatcaatgta 43771195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 26207358 - 26207406
Alignment:
Q  405 taaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  26207358 taaggcttaattgcactttcccccctatagtttgccaattgtgcgattt 26207406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 44832460 - 44832532
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||| ||||||| ||||||||||| ||| |||| |||||||| ||||||||| |||||| ||||||    
T  44832460 gaggaatgctaacaacattctcttttgagcattctttctatcactcacttttttattgggtgaaattaatgta 44832532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 24938409 - 24938527
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccc 133  Q
    |||| |||||||||||||||||||||| | |||| ||||||  ||| ||||| ||||||| | |||||| |||||| | ||||||||| |||| ||| ||    
T  24938409 agagtaatgctagcaacattatcttttcaacactttctctaatacttactctcttattggtttaaatcattgtaggtc-tacactttaaaaattgaatcc 24938507  T
Q  134 acttaaaatggtgggacata 153  Q
    |   ||||||||||||||||    
T  24938508 aaacaaaatggtgggacata 24938527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 37315564 - 37315629
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||| | |||||||||||||||||||| |||||||||||   |||| |||||||||||||    
T  37315564 aatgctagcaacactctcttttgagcactctctctaacactcactctt---ttgggtgaaatcaatgta 37315629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 47237767 - 47237853
Alignment:
Q  67 tctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    ||||||||||||||||||||||||||||||||||  |||||| || ||||||||  ||||| |||  |  |||| ||||||||||||    
T  47237767 tctctctagcactcactcttttattggatgaaattcatgtagaacctacactttgaaaatgaaacttatataaagtggtgggacata 47237853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 20454545 - 20454609
Alignment:
Q  43 ctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||| |  ||||| | |||||||||||||||||||||||||||| ||| |||||||||||    
T  20454545 ctagcaacacttacttttcaacactctctctagcactcactcttttattagataaaatcaatgta 20454609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 26207802 - 26207754
Alignment:
Q  406 aaggcttaattgcatttt-cccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  26207802 aaggcttaattgcatttttcccccctatagtttgccaattgtgcgattt 26207754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 28196829 - 28196781
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  28196829 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 28196781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 30867095 - 30867043
Alignment:
Q  55 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||| ||||||    
T  30867095 tcttttgagcactatctctagcactcacttttttattggattaaattaatgta 30867043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 50164392 - 50164464
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||| |||| |||| |  ||||| | ||||||||||||||||||||| |||||||||| |||||||||||    
T  50164392 gaggaatactagtaacactcactttttaacactctctctagcactcactcatttattggataaaatcaatgta 50164464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 103
Target Start/End: Original strand, 722183 - 722222
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaa 103  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  722183 cactctctctagcactcacttttttattggatgaaatcaa 722222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 9380796 - 9380749
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  9380796 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 9380749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 20225522 - 20225458
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatc 101  Q
    ||||||||||||||||| |  ||||||| ||||||||  ||||||||||||||||||||||| ||||    
T  20225522 gaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattggatggaatc 20225458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 407
Target Start/End: Original strand, 54713243 - 54713282
Alignment:
Q  368 tataaaacaaaaattgtgaccccacctcataattaaataa 407  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  54713243 tataaaacaaaaattgtgaccccacatcataattaaataa 54713282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 2187976 - 2187926
Alignment:
Q  55 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatg 105  Q
    ||||||||||||||||||||||  || |||||||||||| |||||||||||    
T  2187976 tcttttgagcactctctctagctttcgctcttttattgggtgaaatcaatg 2187926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 9380307 - 9380353
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 9380353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 20454716 - 20454666
Alignment:
Q  42 gctagcaacattatcttttgagcactctctctagcactcactcttttattg 92  Q
    |||||||||||| |||||||| ||||||||||| |||||||||| ||||||    
T  20454716 gctagcaacattctcttttgaacactctctctaacactcactctgttattg 20454666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 22592322 - 22592372
Alignment:
Q  56 cttttgagcactctctctagcactcactcttttattggatgaaatcaatgt 106  Q
    ||||||| || ||||||| |||||||||||||||||||||||||| |||||    
T  22592322 cttttgaacattctctctggcactcactcttttattggatgaaataaatgt 22592372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 453
Target Start/End: Original strand, 23539840 - 23539885
Alignment:
Q  407 aggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  23539840 aggcttaattgcactttccccc-tatagtttgccaattgtgcgattt 23539885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 32703704 - 32703658
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  32703704 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 32703658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 2088700 - 2088777
Alignment:
Q  76 cactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    |||||||||||||||| | | |||| |||| ||||  |||||||| ||||||||| |||| |||| ||||||||||||    
T  2088700 cactcactcttttattagcttaaattaatgcaggatctacactttggaaatggaatccacataaagtggtgggacata 2088777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 409 - 453
Target Start/End: Original strand, 25161879 - 25161924
Alignment:
Q  409 gcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattt 25161924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 29699522 - 29699555
Alignment:
Q  71 tctagcactcactcttttattggatgaaatcaat 104  Q
    ||||||||||||||||||||||||||||||||||    
T  29699522 tctagcactcactcttttattggatgaaatcaat 29699555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 9023736 - 9023688
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  9023736 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 9023688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 16178601 - 16178652
Alignment:
Q  55 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||| |||||||||||||||||||||| |||||||  |||||||||||||    
T  16178601 tcttttgtgcactctctctagcactcactc-tttattgagtgaaatcaatgta 16178652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 21777008 - 21776956
Alignment:
Q  55 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||  ||||||||||| || ||||||||||||||||| |||||||||||    
T  21777008 tcttttggacactctctctaacattcactcttttattggataaaatcaatgta 21776956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 28196340 - 28196392
Alignment:
Q  402 aaataaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||| ||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  28196340 aaattaggcttaattgcacttttcccccctataatttgccaattgtgcgattt 28196392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 33653676 - 33653600
Alignment:
Q  31 ataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||||| |   |||| | |||||||||||  | |||||| |||||| |||||||||||||||    
T  33653676 ataagaggaatgctagcaacactcagttttcaacactctctctattaatcactcatttatttgatgaaatcaatgta 33653600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 40812184 - 40812112
Alignment:
Q  74 agcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtg 146  Q
    |||| ||||| ||||||||||| |||| |||||| ||| |||||||| |||||| ||||||| | ||||||||    
T  40812184 agcattcacttttttattggataaaattaatgtatgacctacactttggaaatgaaacccacgttaaatggtg 40812112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 453
Target Start/End: Original strand, 292781 - 292828
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  292781 aggcttaattgcacttttcccccctatagtttgccaattgtgcaattt 292828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 2088839 - 2088776
Alignment:
Q  44 tagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||| | | ||||||| |||||||||| |||||||||||| ||||  |||||||||||||    
T  2088839 tagcaacactcttttttgagtactctctctaacactcactctttaattgagtgaaatcaatgta 2088776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 453
Target Start/End: Original strand, 9023243 - 9023290
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  9023243 aggcttaattgcacttttctcccctatagtttgccaattgtgcgattt 9023290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 452
Target Start/End: Original strand, 32703223 - 32703270
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgatt 452  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  32703223 aaggcttaattgcacttttcccccctataatttgccaattgtgcgatt 32703270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 39744520 - 39744473
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  39744520 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 39744473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 49738950 - 49739009
Alignment:
Q  67 tctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaat 126  Q
    |||||||| |||||||||||||||| | ||||||| |||| || |||||||||| |||||    
T  49738950 tctctctaacactcactcttttatttggtgaaatccatgtgggtcatacactttggaaat 49739009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 169493 - 169447
Alignment:
Q  408 ggcttaattgcatttt-cccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  169493 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattt 169447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 4239420 - 4239374
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||||    
T  4239420 ggcttaattgcactttttccccctatagtttgccaattgtgcgattt 4239374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 24834763 - 24834646
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||||||||||||||| | |||||| | | |||||||||  | ||||||| ||||||| | |||| | ||| || | ||||||||  |||| |||||||    
T  24834763 gaggaatgctagcaacactctcttttaaactctctctctaatagtcactctcttattggtttaaattattgtgggtc-tacactttgaaaattgaaccca 24834665  T
Q  135 cttaaaatggtgggacata 153  Q
    |  ||||||||||||||||    
T  24834664 cacaaaatggtgggacata 24834646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 37306399 - 37306465
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaa 99  Q
    ||||| |||||||| |||| | |||||  ||||||||||||| ||||||||||| |||||| |||||    
T  37306399 aagagaaatgctaggaacactctctttctagcactctctctaacactcactcttatattgggtgaaa 37306465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 39086677 - 39086631
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  39086677 ggcttaattgcacttttctcccatatagtttgccaattgtgcgattt 39086631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 41278644 - 41278730
Alignment:
Q  67 tctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    |||||||| || | ||||||||||||| ||| || ||||||||||  ||| |||  ||||||||||||| |||| |||| |||||||    
T  41278644 tctctctaacatttactcttttattgggtgatatgaatgtaggaccaacattttgaaaatggaacccacataaagtggtaggacata 41278730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 43292411 - 43292365
Alignment:
Q  408 ggcttaattgcatttt-cccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  43292411 ggcttaattgcatttttcccccctttagtttgccaattgtgcgattt 43292365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 47009215 - 47009257
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgt 106  Q
    |||||| ||||||||||||||||||||||||| |||| |||||    
T  47009215 cactctttctagcactcactcttttattggataaaattaatgt 47009257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 169011 - 169060
Alignment:
Q  406 aaggcttaattgca-ttttc-ccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  169011 aaggcttaattgcacttttctccccctatagtttgccaattgtgcgattt 169060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 5545755 - 5545646
Alignment:
Q  44 tagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatg 143  Q
    |||||||| | |||||||| |||||||||||  ||| ||| ||| ||| | | |||||||||| || | |||| |||  ||||||| ||||| |||| ||    
T  5545755 tagcaacactctcttttgaacactctctctaatacttactttttaatttgcttaaatcaatgtgggtcttacattttgaaaatggagcccacataaagtg 5545656  T
Q  144 gtgggacata 153  Q
    ||||||||||    
T  5545655 gtgggacata 5545646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 293273 - 293225
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| |||| |||| ||||||||| ||||||||||||||    
T  293273 aaggcttaattgcactttttccccctatagtttgtcaattgtgcgattt 293225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 19447311 - 19447199
Alignment:
Q  41 tgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaa 140  Q
    ||||||||||| | |||||||| |||||||| ||  ||||||||| | ||||  | |||||| ||| || | | || |||  ||||||||||||| ||||    
T  19447311 tgctagcaacactctcttttgaacactctctttaatactcactctctaattgagttaaatcattgtcggtcctgcattttgaaaatggaacccacataaa 19447212  T
Q  141 atggtgggacata 153  Q
     ||||||||||||    
T  19447211 gtggtgggacata 19447199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 39471154 - 39471226
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| |  ||||| |  ||||||| || |||  ||||||||||| |||||||||||||||    
T  39471154 gaggaatgctagcaacactcacttttaaatactctctttaacaccaactcttttattagatgaaatcaatgta 39471226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 39744024 - 39744076
Alignment:
Q  402 aaataaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||| ||||||||||||| |||| |||| |||||||| |||||||||||||||    
T  39744024 aaattaggcttaattgcactttttccccctatagtttaccaattgtgcgattt 39744076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 48339499 - 48339451
Alignment:
Q  59 ttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||| || |||||||||| ||||||||  |||||||||||    
T  48339499 ttgagcactctctttaacactcactctcttattggaataaatcaatgta 48339451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 48405959 - 48406007
Alignment:
Q  405 taaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||| ||| |||| ||||||||||||||| ||| ||||    
T  48405959 taaggcttaattgcacttttccccctatagtttgccaattatgcaattt 48406007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 48608077 - 48608149
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||| ||||| | |||||| || ||| ||| || || ||||||||||||||||| |||| ||||||    
T  48608077 gaggaatgctaacaacactctcttttaagtactttctttaacattcactcttttattggataaaattaatgta 48608149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 103
Target Start/End: Complemental strand, 49769987 - 49769919
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 103  Q
    ||||||||||||||||| |  ||||||| || ||| | || |||  |||||||||||||||||||||||    
T  49769987 gaggaatgctagcaacagttacttttgaacattctttttaacacatactcttttattggatgaaatcaa 49769919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 50879474 - 50879510
Alignment:
Q  56 cttttgagcactctctctagcactcactcttttattg 92  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  50879474 cttttgaacactctttctagcactcactcttttattg 50879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 95)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 153
Target Start/End: Complemental strand, 11430628 - 11430509
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||| |||||||||||    
T  11430628 aagaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgg-tgaattcaatgtaggacctacactttggaaatggaacc 11430530  T
Q  133 cacttaaaatggtgggacata 153  Q
    ||| |||| ||||||||||||    
T  11430529 cacataaagtggtgggacata 11430509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 11135925 - 11135807
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    |||| |||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  11135925 gagggatgctagcaacactctcttttgaggactctctctagcactcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaaccca 11135826  T
Q  135 cttaaaatggtgggacata 153  Q
    | |||| ||||||||||||    
T  11135825 cataaagtggtgggacata 11135807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 41095602 - 41095703
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccc 133  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||||||||  |||||||||||    
T  41095602 agaggaatgctagcaacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatgtaggacctacactttgaaaatggaaccc 41095701  T
Q  134 ac 135  Q
    ||    
T  41095702 ac 41095703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 32848575 - 32848695
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    ||||||| ||||||||||| | ||||||||||||| ||||||||||| ||||||||||||| |||| |||||||||||| ||||||||  |||||||| |    
T  32848575 aagaggactgctagcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgtaggacctacactttgaaaatggaatc 32848674  T
Q  133 cacttaaaatggtgggacata 153  Q
    ||| |||| ||||||||||||    
T  32848675 cacataaagtggtgggacata 32848695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 35 - 153
Target Start/End: Original strand, 14093995 - 14094113
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    |||||||| |||||||| | |||||||| |||||| | || |||||||| ||| ||||  ||||||||||||||||| |||||||| |||||||||||||    
T  14093995 gaggaatgttagcaacactctcttttgaacactctttgtaacactcactttttgattgagtgaaatcaatgtaggacctacactttggaaatggaaccca 14094094  T
Q  135 cttaaaatggtgggacata 153  Q
    | |||| ||||||||||||    
T  14094095 cataaagtggtgggacata 14094113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 11135736 - 11135808
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  11135736 gaggaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgta 11135808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 13388331 - 13388431
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||||||||||||||| | ||||||||  |||||||||| |||||||| |||||||||||||||||||||||| || ||||||||  ||||| ||||||    
T  13388331 gaggaatgctagcaacactctcttttgaatactctctctaacactcacttttttattggatgaaatcaatgtagtacctacactttgaaaatgaaaccca 13388430  T
Q  135 c 135  Q
    |    
T  13388431 c 13388431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 50773104 - 50773223
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccc 133  Q
    |||| ||||||||||| | | |||||||| |||||||||||||||||| ||||||||||| | |||| |||||||||| || | ||| ||||||||||||    
T  50773104 agagaaatgctagcaatactctcttttgaacactctctctagcactcattcttttattgggtaaaattaatgtaggacctatattttggaaatggaaccc 50773203  T
Q  134 acttaaaatggtgggacata 153  Q
    || |||| |||||| |||||    
T  50773204 acataaagtggtggaacata 50773223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 14094190 - 14094112
Alignment:
Q  29 tgataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||| |||||||||||||| |||||||||||||| ||||||||| |||||||||| ||||||||| |||||||||||||    
T  14094190 tgattagaggaatgctagcgacattatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 14094112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 41917990 - 41918064
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||| |||||||||||||| | |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  41917990 aagaagaatgctagcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgta 41918064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 11430438 - 11430510
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||| ||||| | ||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  11430438 gaggaatgctaacaacactctcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgta 11430510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 41095788 - 41095720
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  41095788 aatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgta 41095720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 29418671 - 29418556
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcac-tcttttattggatgaaatcaatgtaggacatacactttagaaatggaa 130  Q
    |||||||||||||||||||| | |||||||| |||||||| || ||||||| | ||||||||| ||||||||||||||||  |||||||| ||||| |||    
T  29418671 taagaggaatgctagcaacagtctcttttgatcactctctatatcactcactttttttattgggtgaaatcaatgtaggatctacactttggaaatagaa 29418572  T
Q  131 cccacttaaaatggtg 146  Q
    | ||| |||| |||||    
T  29418571 ctcacataaagtggtg 29418556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 28109864 - 28109935
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatg 105  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  28109864 aagaggaat-ctatcaacattatcttttgagcactttctctagcactcacttttttattgggtgaaatcaatg 28109935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 32848766 - 32848694
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||| ||||| | |||||||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  32848766 gaggaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgta 32848694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 41918142 - 41918063
Alignment:
Q  74 agcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    |||||||||||||||||||| | ||||||||||||||| ||||||||  |||||||| |||| |||| ||||||||||||    
T  41918142 agcactcactcttttattgggtaaaatcaatgtaggacctacactttgaaaatggaatccacataaagtggtgggacata 41918063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 19101781 - 19101712
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  19101781 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgta 19101712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 22540368 - 22540437
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  22540368 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgta 22540437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 152
Target Start/End: Complemental strand, 28110053 - 28109937
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    |||||||| ||| |||| | |||||| || ||| ||||||  ||||||| |||||||||||||||||| | |||||  |||||||| |||||||||||||    
T  28110053 gaggaatgttaggaacactctcttttaagtactttctctaatactcacttttttattggatgaaatcattctaggatctacacttt-gaaatggaaccca 28109955  T
Q  135 cttaaaatggtgggacat 152  Q
    | ||||||||||| ||||    
T  28109954 cataaaatggtggaacat 28109937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 30678904 - 30679023
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    ||||||||||||||||||| | | |||||||||||||||||| |||||||||| ||||||| | |||||| |||  | | ||||||||  |||| |||||    
T  30678904 aagaggaatgctagcaacactcttttttgagcactctctctaacactcactctcttattggcttaaatcattgtgagtc-tacactttgaaaattgaacc 30679002  T
Q  133 cacttaaaatggtgggacata 153  Q
    |||  ||| ||||||||||||    
T  30679003 cacacaaagtggtgggacata 30679023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 140
Target Start/End: Complemental strand, 43832458 - 43832350
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaac 131  Q
    ||||||||||| || ||| | | |||||||| |||||| ||||||| ||||||||||||| |  |||||||||||||||  |||||||| |||||| |||    
T  43832458 taagaggaatgatatcaaaactctcttttgaacactctttctagcattcactcttttattcggcgaaatcaatgtaggatctacactttggaaatgaaac 43832359  T
Q  132 ccacttaaa 140  Q
    |||| ||||    
T  43832358 ccacataaa 43832350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 50424866 - 50424973
Alignment:
Q  41 tgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaa 140  Q
    ||||||||||| | ||||||  |||||||||||| || ||||| ||||||||| | |||||||||| || |||||||||| ||||||||||  || ||||    
T  50424866 tgctagcaacactctcttttaggcactctctctaacattcacttttttattgggttaaatcaatgtgggtcatacactttggaaatggaacttacataaa 50424965  T
Q  141 atggtggg 148  Q
     |||||||    
T  50424966 gtggtggg 50424973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 6133808 - 6133738
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    |||||||||||||||||| |  ||||| | || |||||||||||||||| |||||||||||||||||||||    
T  6133808 agaggaatgctagcaacactcacttttcaacaatctctctagcactcacccttttattggatgaaatcaat 6133738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 44739113 - 44739187
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||||||||||||| |||  |||||| ||||||    
T  44739113 aagaggaatgttagcaacactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgta 44739187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 9165298 - 9165371
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||| | ||| | |||||||| |||||| ||| ||||||||||||||||||| |||||||||||||    
T  9165298 agaggaatgctatccacactctcttttgaccactctatcttgcactcactcttttattgggtgaaatcaatgta 9165371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 15523210 - 15523279
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||| |||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  15523210 gaatgctatcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgta 15523279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 15531204 - 15531273
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||| |||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  15531204 gaatgctatcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgta 15531273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 21466751 - 21466682
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||| ||||    
T  21466751 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcagtgta 21466682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 24436495 - 24436575
Alignment:
Q  69 tctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtggga 149  Q
    |||||| ||||| |||||||||||| |||||||||||||||||  |||||||  |||| |||||||| |||| ||||||||    
T  24436495 tctctaacactccctcttttattgggtgaaatcaatgtaggacccacactttgaaaatagaacccacataaagtggtggga 24436575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 19007733 - 19007780
Alignment:
Q  406 aaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||    
T  19007733 aaggcttaattgcactttcccccctatagtttgccaattgtgcgattt 19007780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 25543335 - 25543406
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||||||||||||||||| |  ||||| | ||||||||||| |||| ||||||||||| ||||||||||||    
T  25543335 aagaggaatgctagcaacactcacttttaaacactctctctaacacttactcttttatttgatgaaatcaat 25543406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 103
Target Start/End: Complemental strand, 39039537 - 39039470
Alignment:
Q  36 aggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 103  Q
    |||||||||||||||| |  ||||| | |||||| | |||||||||||||||||||||||||||||||    
T  39039537 aggaatgctagcaacactcacttttcaacactctttttagcactcactcttttattggatgaaatcaa 39039470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 50308772 - 50308822
Alignment:
Q  53 tatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 103  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||    
T  50308772 tatcttttaagcattctctctagcactcactcttttattgggtgaaatcaa 50308822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 41948137 - 41948198
Alignment:
Q  31 ataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattg 92  Q
    ||||||| ||||||||||| ||| |||||||| ||||||||||| |||||||||| ||||||    
T  41948137 ataagagcaatgctagcaatattctcttttgaacactctctctaacactcactctcttattg 41948198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 44271914 - 44271987
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||||   ||||| | |||||||| ||||||| ||| |||||||| ||||||||||||||    
T  44271914 agaggaatgctagcaacatccacttttaaacactctctttagcacttactattttattgaatgaaatcaatgta 44271987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 49318219 - 49318174
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  49318219 ggcttaattgcactttcccccctatagtttgccaattgtgcgattt 49318174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 13114670 - 13114782
Alignment:
Q  41 tgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaa 140  Q
    ||||||||||| | |||||||  ||||||||||| |||||||| | | ||||| | |||||||||| ||  ||||| ||| ||||||||| |||  ||||    
T  13114670 tgctagcaacactctcttttggacactctctctaacactcactatctcattgggttaaatcaatgtgggttatacattttggaaatggaatccatataaa 13114769  T
Q  141 atggtgggacata 153  Q
     ||||||||||||    
T  13114770 gtggtgggacata 13114782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 26980445 - 26980373
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||| ||||| |  ||||| | |||||||||||  ||||||||| |||||||||||||||||||||    
T  26980445 gaggaatgctaacaacactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgta 26980373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 42611179 - 42611231
Alignment:
Q  402 aaataaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  42611179 aaataaggtttaattgcacttttcccccttatagtttgccaattgtgcgattt 42611231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 43851218 - 43851146
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||| |||||||| | |||||| ||| | |||||||| |||||||| |||||||| |||||||||||||    
T  43851218 gaggaatgttagcaacactctcttttaagcgcactctctagtactcactcatttattgggtgaaatcaatgta 43851146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 2225254 - 2225293
Alignment:
Q  68 ctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  2225254 ctctctagcacccactcttttattggatgaaatcaatgta 2225293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 13114855 - 13114784
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||| ||||||||| ||| | |||||||  ||||||||||| |||||||||||||||| ||| ||||||||    
T  13114855 aagagaaatgctagcgacactctcttttggacactctctctaacactcactcttttattagataaaatcaat 13114784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 32163098 - 32163051
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  32163098 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 32163051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 32211938 - 32211895
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  32211938 cactctctccagcactcactcttttattagatgaaatcaatgta 32211895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 153
Target Start/End: Complemental strand, 8899195 - 8899082
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccactta 138  Q
    ||||||||||||| | |||||||| |||||||||||  ||||||||| ||||||| | |||| | ||| |||| ||||||||  |||| ||||||||  |    
T  8899195 aatgctagcaacaatctcttttgaacactctctctaatactcactctcttattggtttaaattattgt-ggacctacactttgaaaattgaacccacaca 8899097  T
Q  139 aaatggtgggacata 153  Q
    ||  |||||||||||    
T  8899096 aaggggtgggacata 8899082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 9347126 - 9347172
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  9347126 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 9347172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 9347605 - 9347559
Alignment:
Q  407 aggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  9347605 aggcttaattgcactttcccccctatagtttgccaattgtgcaattt 9347559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 453
Target Start/End: Original strand, 20480163 - 20480213
Alignment:
Q  403 aataaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  20480163 aataaggcttaattgcacttttccccctatagtttgtcaattgtgcgattt 20480213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 48105170 - 48105124
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  48105170 ggcttaattgcacttttcccccttatagtttgccaattgtgcgattt 48105124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 4578727 - 4578686
Alignment:
Q  68 ctctctagcactcactcttttattggatgaaatcaatgtagg 109  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  4578727 ctctctaacactcactcttttattgggtgaaatcaatgtagg 4578686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 20371406 - 20371361
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||    
T  20371406 ggcttaattgcacttttccccctatagtttgccaattgtgcgattt 20371361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 20480665 - 20480620
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||    
T  20480665 ggcttaattgcacttttccccctatagtttgccaattgtgcgattt 20480620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 27172116 - 27172161
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||    
T  27172116 ggcttaattgcacttttccccctatagtttgccaattgtgcgattt 27172161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 28218200 - 28218159
Alignment:
Q  66 ctctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||| ||||| |||||||||||||||||||||||||||||    
T  28218200 ctctctttagcattcactcttttattggatgaaatcaatgta 28218159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 50615237 - 50615286
Alignment:
Q  405 taaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  50615237 taaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 50615286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 50623065 - 50623114
Alignment:
Q  405 taaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  50623065 taaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 50623114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 153
Target Start/End: Complemental strand, 33114154 - 33114039
Alignment:
Q  37 ggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccact 136  Q
    ||||||||||||| |||  ||||| | |||||||| ||| ||||||| ||||||||| | |||||| | | |||  ||||||||  |||| ||||| ||     
T  33114154 ggaatgctagcaagattcacttttaaacactctctataggactcacttttttattggtttaaatcattct-ggatctacactttgaaaattgaacctaca 33114056  T
Q  137 taaaatggtgggacata 153  Q
    |||||||||||||||||    
T  33114055 taaaatggtgggacata 33114039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 453
Target Start/End: Original strand, 28633719 - 28633766
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  28633719 aggcttaattgcacttttcccccttatagtttgccaattgtacgattt 28633766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 41958113 - 41958152
Alignment:
Q  68 ctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  41958113 ctctcaagcactcactcatttattggatgaaatcaatgta 41958152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 44760668 - 44760742
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||| ||||||||||||| |||||| | |||| |||  | ||  ||||||||||||||||||||||||||||    
T  44760668 taagaggattgctagcaacatt-tcttttcaacactttcttaaacaaccactcttttattggatgaaatcaatgta 44760742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 46823846 - 46823889
Alignment:
Q  411 ttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattt 46823889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 49317746 - 49317797
Alignment:
Q  402 aaataaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||| |||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  49317746 aaatatggcttaattgcacttttccccctatagtttgccaattgtgcaattt 49317797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 104
Target Start/End: Complemental strand, 50425019 - 50424980
Alignment:
Q  65 actctctctagcactcactcttttattggatgaaatcaat 104  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  50425019 actctctctaacactcactcttttattggataaaatcaat 50424980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 453
Target Start/End: Complemental strand, 50430132 - 50430089
Alignment:
Q  411 ttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  50430132 ttaattgcacttttcccccctatagtttgccaattgtgcgattt 50430089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 50773296 - 50773225
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    |||||| ||| |||||||| | | ||||||   ||||||||| |||||||||||||||||||| ||||||||    
T  50773296 aagagggatgttagcaacactctattttgactgctctctctaacactcactcttttattggataaaatcaat 50773225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 999579 - 999533
Alignment:
Q  407 aggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||| |||| ||||| ||||||||||||||||||    
T  999579 aggcttaattgcacttttccccctatagattgccaattgtgcgattt 999533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 15661057 - 15660962
Alignment:
Q  55 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacat 152  Q
    |||||||  ||||||||||| |||||||||| ||||||| | ||||||||||  | |||||| ||| |||||  ||||| | |||| |||||||||||    
T  15661057 tcttttggacactctctctaacactcactctattattgggttaaatcaatgt--gtcatacattttggaaataaaacccgcataaagtggtgggacat 15660962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 453
Target Start/End: Original strand, 20371035 - 20371084
Alignment:
Q  403 aataaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  20371035 aataaggcttaattgcactttccccc-tatagtttgtcaattgtgcaattt 20371084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 1176717 - 1176762
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| |||||||| |||| ||||| |||||||||||||    
T  1176717 ggcttaattgcactttcccccctatattttgctaattgtgcgattt 1176762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 3872813 - 3872760
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttatt 91  Q
    |||||||||||||| |  ||||| | ||||||||||||||||||||||| ||||    
T  3872813 gaatgctagcaacactcacttttcaacactctctctagcactcactcttctatt 3872760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 8665251 - 8665296
Alignment:
Q  76 cactcactcttttattggatgaaatcaatgtaggacatacacttta 121  Q
    ||||||||||||||||| |||||||||||||||  | |||||||||    
T  8665251 cactcactcttttattgaatgaaatcaatgtagatcctacacttta 8665296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 13388483 - 13388450
Alignment:
Q  74 agcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||||| |||||||||||||    
T  13388483 agcactcactcttttattgggtgaaatcaatgta 13388450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 453
Target Start/End: Complemental strand, 13918920 - 13918875
Alignment:
Q  409 gcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||| |||||| || ||||||||||||||||||||||||    
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattt 13918875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 37553110 - 37553061
Alignment:
Q  57 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgt 106  Q
    |||||| |||||||||||||||| ||| | |||||||||||||| |||||    
T  37553110 ttttgaacactctctctagcacttactttcttattggatgaaattaatgt 37553061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 46335112 - 46335163
Alignment:
Q  56 cttttgagcactctctctagcactcac---tcttttattggatgaaatcaat 104  Q
    ||||||| |||||| ||||||||||||   ||||||||||||||||||||||    
T  46335112 cttttgaacactctttctagcactcactcttcttttattggatgaaatcaat 46335163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 47498301 - 47498345
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||    
T  47498301 ggcttaattgcactttccccc-tatagtttgccaattgtgcaattt 47498345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 47955303 - 47955352
Alignment:
Q  405 taaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||| ||||||||| |||  |||||||||||||||||||    
T  47955303 taaggcttaattgcacttttcccccctatcttttgccaattgtgcgattt 47955352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 49318496 - 49318451
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||||| |||| ||||||||  ||||||||||||||    
T  49318496 ggcttaattgcatttttccccctatagtttatcaattgtgcgattt 49318451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 50615674 - 50615629
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  50615674 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattt 50615629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 50623502 - 50623457
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  50623502 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattt 50623457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 999109 - 999157
Alignment:
Q  405 taaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||| ||||||||| ||| |||| ||||||||| ||||||||||||||    
T  999109 taaggtttaattgcacttttccccctatagtttgtcaattgtgcgattt 999157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 4692489 - 4692441
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| |||| |||| ||||||||||||||||||| ||||    
T  4692489 aaggcttaattgcactttttccccctatagtttgccaattgtgcaattt 4692441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 8109049 - 8109001
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| |||  |||||||||||||||||||    
T  8109049 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattt 8109001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 13889330 - 13889290
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctcta 74  Q
    |||||||||||||||||| | |||||||| |||||||||||    
T  13889330 agaggaatgctagcaacactctcttttgaacactctctcta 13889290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 18157055 - 18157107
Alignment:
Q  55 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||| | ||||||||||| ||| |||| |||||||||||||||| ||||||    
T  18157055 tcttttcaacactctctctaacacccacttttttattggatgaaattaatgta 18157107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Original strand, 24886063 - 24886099
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaat 100  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  24886063 cactctctctaacactcactcttttattgggtgaaat 24886099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 27172597 - 27172549
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| | || |||||||||||||||||||    
T  27172597 aaggcttaattgcacttttcccccctgtactttgccaattgtgcgattt 27172549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 28274803 - 28274847
Alignment:
Q  55 tcttttgagcactctctctagcactcactcttttattggatgaaa 99  Q
    |||||| | ||||||||||| |||||||||| |||||||||||||    
T  28274803 tcttttcaacactctctctaacactcactctcttattggatgaaa 28274847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 29068260 - 29068200
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaa 99  Q
    |||||||| |||| | |||||  ||||||||||||| ||||||||||  ||||||||||||    
T  29068260 aatgctaggaacactctctttctagcactctctctaacactcactctcctattggatgaaa 29068200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 35336896 - 35336932
Alignment:
Q  70 ctctagcactcactcttttattggatgaaatcaatgt 106  Q
    |||||||||||| | ||||||||||||||||||||||    
T  35336896 ctctagcactcattattttattggatgaaatcaatgt 35336932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 39692056 - 39692008
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| |||| |||| ||||||||||||||    
T  39692056 aaggcttaattgcacttttcccccctatattttgtcaattgtgcgattt 39692008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 46824338 - 46824286
Alignment:
Q  402 aaataaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||||||| |||| || | ||||||||||||||||||| ||||    
T  46824338 aaataaggcttaattgcactttttcctcctatagtttgccaattgtgcaattt 46824286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 48104676 - 48104724
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||| ||||||||| ||||||||| ||||||||| ||||||||||||||    
T  48104676 aaggtttaattgcacttttcccccctatagtttggcaattgtgcgattt 48104724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 410 - 453
Target Start/End: Complemental strand, 50526524 - 50526480
Alignment:
Q  410 cttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||| |||| |||| ||||||||||||||||||||||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattt 50526480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 51606948 - 51607024
Alignment:
Q  276 ccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaa 352  Q
    |||| ||||||||||| || || |||||||||| || || ||| | |||| ||||||| |||||| |||||||||||    
T  51606948 ccatgatgggaaagttgaagcaggaccatagatatattacttttttattttgatggctgagatttgttacctgctaa 51607024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 9e-40; HSPs: 88)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 13919967 - 13919848
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccc 133  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||  |||||||||||    
T  13919967 agaggaatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtaggacctacactttgaaaatggaaccc 13919868  T
Q  134 acttaaaatggtgggacata 153  Q
    || |||| ||||||||||||    
T  13919867 acataaagtggtgggacata 13919848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 26703436 - 26703552
Alignment:
Q  37 ggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccact 136  Q
    ||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||     
T  26703436 ggaatgctagcaacactctcttctgagcactctctctagcactcactcttttattgggtgaaataaatgtaggacctacactttagaaatggaacccaca 26703535  T
Q  137 taaaatggtgggacata 153  Q
    |||| ||||| ||||||    
T  26703536 taaagtggtgagacata 26703552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 14759829 - 14759711
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||||||||||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| |||||||| ||||| ||||| |    
T  14759829 gaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgtaggacctacactttggaaatagaaccta 14759730  T
Q  135 cttaaaatggtgggacata 153  Q
    | |||| ||||||||||||    
T  14759729 cctaaagtggtgggacata 14759711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 145
Target Start/End: Original strand, 19840879 - 19840989
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 134  Q
    ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||| |||||||||||||    
T  19840879 gaggaatgctagcaacactctattttgagcactctctctagcactcactcttttattgggtgaaatcaatataggacctacactttggaaatggaaccca 19840978  T
Q  135 cttaaaatggt 145  Q
    | |||| ||||    
T  19840979 cataaagtggt 19840989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 25428471 - 25428591
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacc 132  Q
    ||||| |||| |||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |||||||| |||||| ||||    
T  25428471 aagagaaatgatagcaacactctcttttgagcactctctttagcactcactcttttattggataaaatcaatgtaggatctacactttggaaatgtaacc 25428570  T
Q  133 cacttaaaatggtgggacata 153  Q
    ||| |||| ||||||||||||    
T  25428571 cacataaagtggtgggacata 25428591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 45909636 - 45909524
Alignment:
Q  41 tgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaa 140  Q
    ||||||||||| | ||||||||  |||||||||| |||||||||||||||||| | ||||||||||||||| |||| ||| |||||||||||||| ||||    
T  45909636 tgctagcaacactctcttttgaatactctctctaacactcactcttttattgggtaaaatcaatgtaggacctacaatttggaaatggaacccacataaa 45909537  T
Q  141 atggtgggacata 153  Q
     ||||||||||||    
T  45909536 gtggtgggacata 45909524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 37549619 - 37549706
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacacttt 120  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||| ||||||||||||| |||| |||||||||||| ||||||||    
T  37549619 aagaggaatgctagcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgtaggacctacacttt 37549706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 27888468 - 27888350
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccc 133  Q
    |||||||||||||||||| | |||||||||||||||||||| |||||||||| ||||||| | |||||| ||| || | ||||||||| |||| ||||||    
T  27888468 agaggaatgctagcaacactctcttttgagcactctctctaacactcactctcttattggtttaaatcattgtgggtc-tacactttaaaaattgaaccc 27888370  T
Q  134 acttaaaatggtgggacata 153  Q
    ||  ||| ||||||||||||    
T  27888369 acacaaagtggtgggacata 27888350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 17354711 - 17354638
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||| | | |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  17354711 agaggaatgctagcaacactcttttttgagcactctctctaacactcattcttttattggatgaaatcaatgta 17354638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 26703624 - 26703551
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||||| |  |||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  26703624 taagaggaatgctagcaacact--cttttgagcattctctctagcactcactcttttattgggtgaaatcaatgta 26703551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 22786149 - 22786220
Alignment:
Q  36 aggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  22786149 aggaatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgta 22786220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 13919781 - 13919849
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||| | |||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  13919781 aatgctagcaacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgta 13919849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 33008101 - 33008173
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| |  ||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  33008101 gaggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgta 33008173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 153
Target Start/End: Original strand, 17354561 - 17354639
Alignment:
Q  75 gcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    ||||||||| ||||||||| | ||||||||||||||| |||||||| ||||| |||||||| |||| ||||||||||||    
T  17354561 gcactcacttttttattgggtaaaatcaatgtaggacctacactttggaaatagaacccacataaagtggtgggacata 17354639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 22189936 - 22190008
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||| |||| |   |||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  22189936 gaggaatgctagaaacactcatttttcaacactctctctagcactcactcttttattggatgaaatcaatgta 22190008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 153
Target Start/End: Original strand, 24539123 - 24539235
Alignment:
Q  41 tgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaa 140  Q
    ||||||||||| | |||||||  ||||||||||| |||||||||| | ||||| | |||||||||| || |||||| ||| ||||||||| |||  ||||    
T  24539123 tgctagcaacactctcttttggacactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatggaatccatataaa 24539222  T
Q  141 atggtgggacata 153  Q
     ||||||||||||    
T  24539223 gtggtgggacata 24539235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 31960036 - 31959968
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||| ||||| | |||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  31960036 aatgctaacaacactctcttttgagcactctctctagcactcacttatttattggatgaaattaatgta 31959968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 32205074 - 32205145
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||| |  ||||||| |||||||||||   ||||||||||||||||||||||||||||||    
T  32205074 aagaggaatgctagcaacactcacttttgaacactctctcta---ctcactcttttattggatgaaatcaatgta 32205145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 45909453 - 45909525
Alignment:
Q  36 aggaatgctagcaacattatcttttgagcactctctctagcactcactc-ttttattggatgaaatcaatgta 107  Q
    |||||||||| ||||| |||||||||||||||||| |||||| |||||| ||||||||| |||||||||||||    
T  45909453 aggaatgctatcaacactatcttttgagcactctccctagcattcactctttttattgggtgaaatcaatgta 45909525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 19494521 - 19494450
Alignment:
Q  36 aggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||| || | ||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||    
T  19494521 aggaatgctagcagcactctcttttgagtactttctctagtactcactcttttattgggtgaaatcaatgta 19494450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 26459150 - 26459068
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtg 146  Q
    |||||||||||| ||||||| ||||||| | | ||| |||||| |||| ||||||||||||||||||||||| |||| |||||    
T  26459150 cactctctctagaactcacttttttattaggtaaaaacaatgtgggacctacactttagaaatggaacccacataaagtggtg 26459068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 27888277 - 27888351
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||| |  ||||||||||||||||||| ||||||| || | ||||||| |||||||||||    
T  27888277 aagaggaatgctagcaacactcacttttgagcactctctctaacactcaccctctcattggataaaatcaatgta 27888351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 31502649 - 31502579
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 103  Q
    ||||||||||||||||||| |  ||||| | || |||||||| ||||||||||||||||||||||||||||    
T  31502649 aagaggaatgctagcaacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaa 31502579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 11824099 - 11824140
Alignment:
Q  66 ctctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  11824099 ctctctctagcactcactcttttattggatgaaatcaatgta 11824140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 153
Target Start/End: Complemental strand, 17749883 - 17749762
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaac 131  Q
    |||||| | ||||||||||| | |||||||  ||||||||||| |||||||||| | ||||| | |||||||||| || |||||| ||| |||||| ||     
T  17749883 taagagtagtgctagcaacactctcttttggacactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatgaaat 17749784  T
Q  132 ccacttaaaatggtgggacata 153  Q
    |||  |||| ||||||||||||    
T  17749783 ccatataaagtggtgggacata 17749762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 19494374 - 19494451
Alignment:
Q  76 cactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    |||||||  ||||||||| ||||||||||||||||  ||||||||  ||||||||||||| |||| ||||||||||||    
T  19494374 cactcacatttttattgggtgaaatcaatgtaggatctacactttgaaaatggaacccacataaagtggtgggacata 19494451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 21963172 - 21963237
Alignment:
Q  83 tcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtggg 148  Q
    ||||||||||| ||||||||||||||||  |||||||| |||||||||| ||| ||||||||||||    
T  21963172 tcttttattgggtgaaatcaatgtaggatctacactttggaaatggaactcacataaaatggtggg 21963237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 25428659 - 25428590
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||| | ||||||||||||||| | ||| ||||||||||||||||  |||||||||||||    
T  25428659 gaatgctagcaacactctcttttgagcactctttttagtactcactcttttattgtgtgaaatcaatgta 25428590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 26190069 - 26189972
Alignment:
Q  55 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacat 152  Q
    |||||||| |||| |||||| |||||||||||||||||| | ||||||| ||||||| ||||||||  ||||| ||||||| | |  |||||||||||    
T  26190069 tcttttgaacactttctctaacactcactcttttattgggtaaaatcaacgtaggacctacactttgaaaatgaaacccacatgaggtggtgggacat 26189972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 24539309 - 24539237
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    |||||| ||||||||| ||| | |||||||  ||||||||||| |||||||||||||||||||| ||||||||    
T  24539309 taagagaaatgctagcgacactctcttttggacactctctctaacactcactcttttattggataaaatcaat 24539237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 7775026 - 7775069
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  7775026 cactctctatagcactcactcttttattggatgaaatcaatgta 7775069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 19423020 - 19422945
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||| ||||| |||||||| |  ||||| | ||||||||||| |||||||||||| |||||||||||||||||||    
T  19423020 taagaagaatgttagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatgta 19422945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 44511090 - 44511047
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  44511090 cactctctctagcactcacttttttattggatgaaatcaatgta 44511047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 407
Target Start/End: Complemental strand, 9045223 - 9045166
Alignment:
Q  350 taactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataa 407  Q
    |||||||| | ||| |||||||||||||||| | ||||||||||||||||||||||||    
T  9045223 taacttttggatggcttatataaaacaaaaactatgaccccacctcataattaaataa 9045166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 14795131 - 14795200
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||| |  ||||| | ||||||||||| || ||||| |||||||||||||||||||||||    
T  14795131 gaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgta 14795200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 15242123 - 15242192
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||| |  ||||| | ||||||||||| || ||||| |||||||||||||||||||||||    
T  15242123 gaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgta 15242192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 22786304 - 22786219
Alignment:
Q  68 ctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    |||||| ||| ||||||||||||  | |||||||||||||  || |||||||| |||||||||||||| |||| ||||| ||||||    
T  22786304 ctctcttgcaatcactcttttatcaggtgaaatcaatgtataacctacactttggaaatggaacccacataaagtggtgagacata 22786219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 32213049 - 32212980
Alignment:
Q  38 gaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||| |||| |  ||||| | |||||||||||||||||  |||||||||||||||||||||||||    
T  32213049 gaatgctagtaacactcactttttaacactctctctagcactctatcttttattggatgaaatcaatgta 32212980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 37972453 - 37972404
Alignment:
Q  405 taaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  37972453 taaggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 37972404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 29292920 - 29292968
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  29292920 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 29292968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 2520627 - 2520698
Alignment:
Q  32 taagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 103  Q
    |||||||| |||||| |||| | |||||| | ||||||||| | |||||||||||||||||| |||||||||    
T  2520627 taagaggagtgctaggaacactctcttttcaacactctctccaacactcactcttttattgggtgaaatcaa 2520698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 407 - 453
Target Start/End: Original strand, 10533033 - 10533080
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  10533033 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 10533080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 14759646 - 14759709
Alignment:
Q  41 tgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||| |||||  |||||||||| |||||| |||||||||||||||||||||  ||||||||||    
T  14759646 tgctaacaacacaatcttttgagtactctccctagcactcactcttttattgagtgaaatcaat 14759709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 17749689 - 17749760
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||| ||||||||| ||| | | |||||  ||||||||||| |||||||||||||||||||| ||||||||    
T  17749689 aagagaaatgctagcgacactcttttttggacactctctctaacactcactcttttattggataaaatcaat 17749760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 31874061 - 31874100
Alignment:
Q  68 ctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  31874061 ctctctagcactcacttttttattggatgaaatcaatgta 31874100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 37889314 - 37889267
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  37889314 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 37889267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 9035347 - 9035301
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 9035301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 29293400 - 29293354
Alignment:
Q  408 ggcttaattgcatttt-cccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  29293400 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattt 29293354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 37888833 - 37888879
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  37888833 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattt 37888879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 39254078 - 39254152
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||| |||||||||||||||  ||||| | || ||||| |||||||||||||||||||| || |||| ||||||    
T  39254078 aagagaaatgctagcaacattcacttttcaacattctctatagcactcactcttttattgaataaaattaatgta 39254152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 3204669 - 3204713
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  3204669 ggcttaattgcactttccccc-tatagtttgccaattgtgcgattt 3204713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 3205150 - 3205101
Alignment:
Q  405 taaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  3205150 taaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 3205101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 10619574 - 10619506
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 104  Q
    ||||||||||||||||| | |||||||| |||||||||||||||  ||||| || |||| ||||||||||    
T  10619574 gaggaatgctagcaacactctcttttgatcactctctctagcacctactctctt-ttgggtgaaatcaat 10619506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 17156964 - 17157013
Alignment:
Q  405 taaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  17156964 taaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 17157013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 22740153 - 22740202
Alignment:
Q  405 taaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  22740153 taaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 22740202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 103
Target Start/End: Original strand, 27949269 - 27949338
Alignment:
Q  34 agaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 103  Q
    ||||||| |||| ||||| |  ||||| | ||||||||||| ||||||||||| ||||||||||||||||    
T  27949269 agaggaaagctaacaacactcactttttaacactctctctaacactcactcttgtattggatgaaatcaa 27949338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 14629853 - 14629916
Alignment:
Q  276 ccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagattt 340  Q
    |||||||||||||||| |||||  ||||||||||||||| ||| | |||||||||||| ||||||    
T  14629853 ccatcatgggaaagttgaaccacaaccatagatttaatagttt-ttatttggatggctaagattt 14629916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 20419380 - 20419332
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  20419380 aaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 20419332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 27320226 - 27320294
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||   |||| | ||||||||| | ||||||||||||||||| || |||||||||||    
T  27320226 aatgctagcaacattcatttttcaacactctctccaacactcactcttttattgaataaaatcaatgta 27320294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 38826969 - 38826921
Alignment:
Q  406 aaggcttaattgcatttt-cccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  38826969 aaggcttaattgcatttttcccccctatagtttgtcaattgtgcgattt 38826921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 41873427 - 41873495
Alignment:
Q  31 ataagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaa 99  Q
    ||||||| |||||||| |||| | |||||  ||||||||||||| |||||||| ||||||||| |||||    
T  41873427 ataagagaaatgctaggaacactctctttctagcactctctctaacactcacttttttattgggtgaaa 41873495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 107
Target Start/End: Complemental strand, 8073434 - 8073399
Alignment:
Q  72 ctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8073434 ctagcactcactcttttatcggatgaaatcaatgta 8073399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 13744288 - 13744241
Alignment:
Q  406 aaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  13744288 aaggcttaattgcacttttccccctatagtttgtcaattgtgcgattt 13744241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 453
Target Start/End: Original strand, 20418891 - 20418934
Alignment:
Q  411 ttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattt 20418934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 23934084 - 23934021
Alignment:
Q  43 ctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgt 106  Q
    ||||||||| | |||||| |||||| | ||||||||| ||||||||||||| | ||||||||||    
T  23934084 ctagcaacactctcttttaagcactttgtctagcacttactcttttattgggtaaaatcaatgt 23934021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 42887807 - 42887740
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgt 106  Q
    |||||||| || ||| |||||||| |||||||| |||||||| |||||||||||  ||||| ||||||    
T  42887807 aatgctagtaaaattctcttttgatcactctctttagcactcgctcttttattgagtgaaaccaatgt 42887740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 46517321 - 46517360
Alignment:
Q  68 ctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  46517321 ctctctagcactcactcatttattggataaaatcaatgta 46517360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 452
Target Start/End: Original strand, 9034866 - 9034912
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgatt 452  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  9034866 aggcttaattgcacttttcccccctataatttgccaattgtgcgatt 9034912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 13741557 - 13741603
Alignment:
Q  408 ggcttaattgcatttt-cccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||    
T  13741557 ggcttaattgcatttttcccccctatagtttaccaattgtgcgattt 13741603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 17813954 - 17813885
Alignment:
Q  37 ggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||| ||||||||| | |||||| |||  |||||||||||||||||||||||  | ||||||||||||    
T  17813954 ggaatgcaagcaacattcttttttgaacacg-tctctagcactcactcttttattaaaagaaatcaatgta 17813885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 18864456 - 18864410
Alignment:
Q  407 aggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||| | ||| |||| ||||||||||||||||||||||||    
T  18864456 aggcttaattgtacttttccccctatagtttgccaattgtgcgattt 18864410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 107
Target Start/End: Complemental strand, 41508420 - 41508386
Alignment:
Q  73 tagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||| |||||||||||||||||||||||    
T  41508420 tagcactcacttttttattggatgaaatcaatgta 41508386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 16199034 - 16198985
Alignment:
Q  405 taaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||| |||| |||  ||||||||||||||||||||||||    
T  16199034 taaggcttaattgcactttttcccattatagtttgccaattgtgcgattt 16198985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 27096047 - 27096092
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| |||||||| |||| ||||| |||||||||||||    
T  27096047 ggcttaattgcactttcccccctatattttgctaattgtgcgattt 27096092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 27182256 - 27182211
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| |||||||| |||| ||||| |||||||||||||    
T  27182256 ggcttaattgcactttcccccctatattttgctaattgtgcgattt 27182211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Original strand, 48359320 - 48359365
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  48359320 ggcttaattgcacttttccccctatagtttgtcaattgtgcgattt 48359365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 49140032 - 49139943
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 153  Q
    ||||||||||| | || | ||||||||||||||| |||||||||| || | ||||||| ||| | ||||||| | || |||||| |||||    
T  49140032 cactctctctaccgcttattcttttattggatgagatcaatgtagaacctgcactttaaaaaagaaacccacgttaagtggtggaacata 49139943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 2520775 - 2520715
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattgg 93  Q
    ||||||||||||||||||| | |||||| | ||||||| ||| ||||||| | ||||||||    
T  2520775 aagaggaatgctagcaacactctcttttcaacactctcactatcactcacacatttattgg 2520715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 107
Target Start/End: Original strand, 11692220 - 11692248
Alignment:
Q  79 tcactcttttattggatgaaatcaatgta 107  Q
    |||||||||||||||||||||||||||||    
T  11692220 tcactcttttattggatgaaatcaatgta 11692248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 12263619 - 12263547
Alignment:
Q  35 gaggaatgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    |||||| |||||||||| |  ||||| | ||||||||||| ||  ||||||||||| ||||| ||||||||||    
T  12263619 gaggaacgctagcaacacttacttttcaacactctctctatcatccactcttttatcggatggaatcaatgta 12263547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 453
Target Start/End: Complemental strand, 13864016 - 13863964
Alignment:
Q  402 aaataaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||||||| ||||| ||| |||  |||||||||||||||||||    
T  13864016 aaataaggcttaattgcacttttcacccctatcttttgccaattgtgcgattt 13863964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 27949454 - 27949402
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttatt 91  Q
    ||||||||||||| | |||||||| |||||||||||  ||||||||| |||||    
T  27949454 aatgctagcaacactctcttttgaacactctctctaatactcactctcttatt 27949402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 30742720 - 30742664
Alignment:
Q  33 aagaggaatgctagcaacattatcttttgagcactctctctagcactcactctttta 89  Q
    |||||||||||||||||||||  ||||||| || |||| ||| || |||||||||||    
T  30742720 aagaggaatgctagcaacattcacttttgaacattctccctaacattcactctttta 30742664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 453
Target Start/End: Original strand, 37971954 - 37972006
Alignment:
Q  402 aaataaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||| ||||||||||||| ||||| ||| | ||||||||||||||||||||||    
T  37971954 aaattaggcttaattgcacttttctcccctgtagtttgccaattgtgcgattt 37972006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 41531625 - 41531557
Alignment:
Q  284 ggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaa 352  Q
    |||||||| ||||| | |||| ||||||||| |||  ||||||||||||| |||| | |||||||||||    
T  41531625 ggaaagtttaaccacgtccatggatttaatagttttaaatttggatggctaagatcttttacctgctaa 41531557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 42418589 - 42418637
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||| || ||||||||| |||||||||| |||||||||||||    
T  42418589 aaggcttaatttcacttttcccccctatagtttgctaattgtgcgattt 42418637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 43930114 - 43930078
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaat 100  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  43930114 cactctctctaacactcactcttttattgggtgaaat 43930078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 47822003 - 47822047
Alignment:
Q  62 agcactctctctagcactcactcttttattggatgaaatcaatgt 106  Q
    ||||||||||||| ||||||||||| |||||| ||||||| ||||    
T  47822003 agcactctctctaacactcactcttatattgggtgaaatccatgt 47822047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 27468 - 27381
Alignment:
Q  68 ctctctagcactcactctttta-ttggatgaaatcaatgtaggacat-acactttagaaatggaacccacttaaaatggtgggacata 153  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||  |||||||||| || |||| ||||||||||||    
T  27468 ctctctagcactcactcttttaattgggtgaaatcaatgtaggacataacactttgaaaatggaacctacataaagtggtgggacata 27381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 9690 - 9733
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  9690 cactctctctaacactcacttttttattggatgaaatcaatgta 9733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 11236 - 11279
Alignment:
Q  64 cactctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  11236 cactctctctaacactcacttttttattggatgaaatcaatgta 11279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 403 - 453
Target Start/End: Original strand, 325 - 376
Alignment:
Q  403 aataaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  325 aataaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattt 376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 816 - 771
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| |||  ||| ||||||||||||||||||||||||    
T  816 ggcttaattgcactttttcccctatagtttgccaattgtgcgattt 771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 19619 - 19666
Alignment:
Q  406 aaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  19619 aaggcttaattgcaattttccccatatagtttgccaattgtgcgattt 19666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 453
Target Start/End: Complemental strand, 20098 - 20051
Alignment:
Q  407 aggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  20098 aggcttaattgcacttttcccccttatagtttgtcaattgtgcgattt 20051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 50560 - 50515
Alignment:
Q  408 ggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||    
T  50560 ggcttaattgcacttttccccctatagtttgccaattgtgcgattt 50515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 453
Target Start/End: Original strand, 50070 - 50119
Alignment:
Q  403 aataaggcttaattgcattttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||| ||||    
T  50070 aataaggcttaattgcactttccccc-tatagtttgtcaattgtgcaattt 50119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 453
Target Start/End: Original strand, 9902 - 9951
Alignment:
Q  405 taaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  9902 taaggcttaattgcactttttccccctatagtttgccaattgtgcgattt 9951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 2251 - 2291
Alignment:
Q  67 tctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  2251 tctctctagcactcactcttttataagatgaaatcaatgta 2291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 2282 - 2322
Alignment:
Q  67 tctctctagcactcactcttttattggatgaaatcaatgta 107  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  2282 tctctctagcactcactcttttataagatgaaatcaatgta 2322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 453
Target Start/End: Complemental strand, 38751 - 38703
Alignment:
Q  406 aaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  38751 aaggcttaattgcactttttccccctatagtttgccaattgtgcgattt 38703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 153
Target Start/End: Complemental strand, 27991 - 27880
Alignment:
Q  41 tgctagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaa 140  Q
    |||||||||||   |||||||| |||||||| ||  ||||||||| ||||||| | |||||| ||| || | |||||||| ||||| ||||||||  |||    
T  27991 tgctagcaacaccctcttttgaacactctctttaatactcactctcttattggtttaaatcattgtgggtc-tacactttggaaatagaacccacacaaa 27893  T
Q  141 atggtgggacata 153  Q
     ||||||||||||    
T  27892 gtggtgggacata 27880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 453
Target Start/End: Complemental strand, 185328 - 185282
Alignment:
Q  408 ggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||    
T  185328 ggcttaattgcacttttcctccctatagtttgccaattgtgcgattt 185282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 204707 - 204761
Alignment:
Q  39 aatgctagcaacattatcttttgagcactctctctagcactcactcttttattgg 93  Q
    ||||||||||||| | | |||||| || ||||||||| |||||||||||||||||    
T  204707 aatgctagcaacactcttttttgaacattctctctagtactcactcttttattgg 204761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 453
Target Start/End: Complemental strand, 183724 - 183670
Alignment:
Q  400 ttaaataaggcttaattgca-ttttcccccgtatagtttgccaattgtgcgattt 453  Q
    ||||| |||||||||||||| ||||||||| |||| ||||| |||||||||||||    
T  183724 ttaaaaaaggcttaattgcacttttcccccctatattttgctaattgtgcgattt 183670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 296853 - 296897
Alignment:
Q  55 tcttttgagcactctctctagcactcactcttttattggatgaaa 99  Q
    |||||| | ||||||||||| |||||||||| |||||||||||||    
T  296853 tcttttcaacactctctctaacactcactctcttattggatgaaa 296897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University