View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3805_low_34 (Length: 265)
Name: NF3805_low_34
Description: NF3805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3805_low_34 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 42029501 - 42029757
Alignment:
| Q |
1 |
taccgttattttattgtgatgatgaccggcatattttattttacttcttcacattgcagttagacctgcgggacagagatggacttgagaaaatattttc |
100 |
Q |
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| T |
42029501 |
taccgttattttattgtgatgatgaccggcatattttattttacttcttcacattgcagttagacctgcgggacagagatggacttgagaaaatattttc |
42029600 |
T |
|
| Q |
101 |
ttccacaaagtaaggattgtgcataagcttttgtgatttttcttatatacaaaagattggacacatttcaatttcgagttctcttgcaatttcatttgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42029601 |
ttccacaaagtaaggattgtgcataagcttttgtgatttttcttttatacaaaagattggacacatttcaatttcgagttctcttgcaatttcatttgat |
42029700 |
T |
|
| Q |
201 |
cactgatttataaatgttttatgtatatgtatatttcctttcagatttgatgatgtc |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
42029701 |
cactgatttataaatgttttatgtatatgtatatttcctttcagatttgatgctgtc |
42029757 |
T |
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