View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3810_low_1 (Length: 648)

Name: NF3810_low_1
Description: NF3810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3810_low_1
NF3810_low_1
[»] chr2 (2 HSPs)
chr2 (168-639)||(41795316-41795787)
chr2 (17-167)||(28741008-28741158)
[»] chr4 (3 HSPs)
chr4 (239-639)||(55954621-55955021)
chr4 (319-626)||(55958254-55958564)
chr4 (17-167)||(27057366-27057506)
[»] chr3 (2 HSPs)
chr3 (17-169)||(36659055-36659207)
chr3 (17-167)||(35869893-35870041)
[»] chr7 (4 HSPs)
chr7 (17-165)||(16637297-16637435)
chr7 (17-165)||(17458203-17458341)
chr7 (17-165)||(17594873-17595011)
chr7 (21-112)||(26012364-26012455)
[»] chr5 (3 HSPs)
chr5 (17-168)||(12217453-12217604)
chr5 (17-125)||(38976475-38976583)
chr5 (120-153)||(12217607-12217640)
[»] chr6 (4 HSPs)
chr6 (17-167)||(28737221-28737372)
chr6 (373-639)||(12268337-12268600)
chr6 (373-639)||(12425085-12425348)
chr6 (120-149)||(28737189-28737218)
[»] chr8 (1 HSPs)
chr8 (17-122)||(35498393-35498498)


Alignment Details
Target: chr2 (Bit Score: 416; Significance: 0; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 168 - 639
Target Start/End: Original strand, 41795316 - 41795787
Alignment:
Q  168 caggatttgtgtattttagttacctagcaccactgtctacctactcttcgttgattccggacttttgccatagtcattttaaccataacacatgcttcat 267  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41795316 caggatatgtgtattttagttacctagcaccactgtctacctactcttcgctgattccggacttttgccatagtcattttaaccataacacatgcttcat 41795415  T
Q  268 gatggtttcacaaatttttccctcacgataaatagcgtcgctgaatcaatgtggagttggaatcaaatacaggccatttctcctagccgttgcagctccc 367  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41795416 gatggtttcacaaatttttccctcacgataaatagcgtcgctgaatcaatgtggagtaggaatcaaatacaggccatttctcctagccgttgcagctccc 41795515  T
Q  368 aaggattcagtcatatctaagtcctctggtttcattccattaggaagttcccaattgaagtgatacaacaatgcagctagaggaagctcaatgttagcta 467  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41795516 aaggattcagtcttatctaagtcgtctggtttcattccattaggaagttcccaattgaagtgatgcaacaatgcagctagaggaagctcaatgttagcta 41795615  T
Q  468 agccaagcgaaattcccggacacattcttcttcctcccccaaaagagatgtattcaaagttattactactattcactttattaaattcaaaatctttact 567  Q
    ||||||||||||||||||||||||||||||||||| ||| | ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41795616 agccaagcgaaattcccggacacattcttcttccttccctagaagggatgtattcaaagttattattactattcactttattaaattcaaaatctttact 41795715  T
Q  568 gtcctgaaacctcttaggtataaaattatctgcatcataccaatatttgggatctcttccgattgcctatgc 639  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  41795716 gtcctgaaacctcttatgtataaaattatctgcatcatatcaatatttgggatctcttccgattgcccatgc 41795787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 17 - 167
Target Start/End: Complemental strand, 28741158 - 28741008
Alignment:
Q  17 aattaggaccgtcagattgtaatgtgtggctgagatggtttacagtgaatttgtaactgcgttaaactgaatcgtctgattgcaaatgtgtggctgagat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| | ||||||||||||||||||||||||||||    
T  28741158 aattaggaccgtcagattgtaatgtgtggctgagatggtttacagtgattttgtaactgtgttaagctggaccgtctgattgcaaatgtgtggctgagat 28741059  T
Q  117 tgtttacagcgtgaaacaacgtgctttttctacagcaggcaaacccatccc 167  Q
    |||||||||||||||||| ||||||||||||||| || |||||| ||||||    
T  28741058 tgtttacagcgtgaaacagcgtgctttttctacaacaagcaaactcatccc 28741008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 237; Significance: 1e-131; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 239 - 639
Target Start/End: Original strand, 55954621 - 55955021
Alignment:
Q  239 agtcattttaaccataacacatgcttcatgatggtttcacaaatttttccctcacgataaatagcgtcgctgaatcaatgtggagttggaatcaaataca 338  Q
    |||||||||||| |||| ||||| ||| |||||||||||| | ||||  ||||  |||||||| | ||||||||||||||||||||||||||||||||||    
T  55954621 agtcattttaactataatacatgtttcgtgatggtttcacgatttttgtcctcgtgataaataacatcgctgaatcaatgtggagttggaatcaaataca 55954720  T
Q  339 ggccatttctcctagccgttgcagctcccaaggattcagtcatatctaagtcctctggtttcattccattaggaagttcccaattgaagtgatacaacaa 438  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55954721 ggccatttctcctagccgctgcagctccaaaggcttcagtcatatccaagtcctctggtttcattccattaggaagttcccaattgaagtgatacaacaa 55954820  T
Q  439 tgcagctagaggaagctcaatgttagctaagccaagcgaaattcccggacacattcttcttcctcccccaaaagagatgtattcaaagttattactacta 538  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||| ||||| || |     
T  55954821 tgcagccagaggaagctcaatattagctaagccaagcgaaattcccggacacattcttcttcctcccccaaaaggcatgtaatcaaagctattattattg 55954920  T
Q  539 ttcactttattaaattcaaaatctttactgtcctgaaacctcttaggtataaaattatctgcatcataccaatatttgggatctcttccgattgcctatg 638  Q
    |||| ||||||||| |||||| |  |||| || | |||||| | ||||||||| || | |||||||||||||| ||||||||||||||| |||||| |||    
T  55954921 ttcaatttattaaaatcaaaaccagtactatcattaaacctttcaggtataaacttctttgcatcataccaatgtttgggatctcttccaattgcccatg 55955020  T
Q  639 c 639  Q
    |    
T  55955021 c 55955021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 319 - 626
Target Start/End: Original strand, 55958254 - 55958564
Alignment:
Q  319 tggagttggaatcaaatacaggccatttctcctagccgttgcagctcccaaggattcagtcatatctaagtcctctggtttcattccattaggaagttcc 418  Q
    ||||||||||||||||||||||   ||||||||||||    ||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  55958254 tggagttggaatcaaatacaggttgtttctcctagccacaacagctccaaaggcttcagtcatatccaagtcctctggtttcattccattaggaagttcc 55958353  T
Q  419 caattgaagtgatacaacaatgcagctagaggaagctcaatgttagctaagccaagcgaaattcccggacacattcttcttcctcccccaaaagagatgt 518  Q
    ||||||||||||||||| |||||||| |||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||||| ||||||| |||||    
T  55958354 caattgaagtgatacaataatgcagcaagaggaagctcaatattagctaagccaaacaaaattcctggacacattcttcttcctcctccaaaagggatgt 55958453  T
Q  519 attcaaag---ttattactactattcactttattaaattcaaaatctttactgtcctgaaacctcttaggtataaaattatctgcatcataccaatattt 615  Q
    ||||||||   |||||| ||||||||||||||||||| ||||||| ||||||||| |||||||||| ||||||||| || ||||||||||||||||||||    
T  55958454 attcaaagttattattattactattcactttattaaaatcaaaatatttactgtcatgaaacctctcaggtataaacttctctgcatcataccaatattt 55958553  T
Q  616 gggatctcttc 626  Q
    |||||||||||    
T  55958554 gggatctcttc 55958564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 17 - 167
Target Start/End: Complemental strand, 27057506 - 27057366
Alignment:
Q  17 aattaggaccgtcagattgtaatgtgtggctgagatggtttacagtgaatttgtaactgcgttaaactgaatcgtctgattgcaaatgtgtggctgagat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  27057506 aattaggaccgtcagattgtaatgtgtggctgagatggtttacagtgaatttgtaactgtgttaagctgaaccgtctgattgcaaatgtgtggctgagat 27057407  T
Q  117 tgtttacagcgtgaaacaacgtgctttttctacagcaggcaaacccatccc 167  Q
    |||||||||          ||||||||||||||||||||||||||||||||    
T  27057406 tgtttacag----------cgtgctttttctacagcaggcaaacccatccc 27057366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 1e-61; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 17 - 169
Target Start/End: Original strand, 36659055 - 36659207
Alignment:
Q  17 aattaggaccgtcagattgtaatgtgtggctgagatggtttacagtgaatttgtaactgcgttaaactgaatcgtctgattgcaaatgtgtggctgagat 116  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  36659055 aattaggaccgtcatattgtaatgtgtggttgagatggtttacagtgaatttgtaactgcgttaagctgaaccgtctgattgcaaatgtgtggctgagat 36659154  T
Q  117 tgtttacagcgtgaaacaacgtgctttttctacagcaggcaaacccatcccca 169  Q
    |||||||  ||||||||| ||||||||||||||||||| ||||||||||||||    
T  36659155 tgtttacgacgtgaaacagcgtgctttttctacagcagacaaacccatcccca 36659207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 35869893 - 35870041
Alignment:
Q  17 aattaggaccgtcagattgtaatgtgtggctgagatggtttacagtgaatttgtaactgcgttaaactgaatcgtctgattgcaaatgtgtggctgagat 116  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| | ||| |||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  35869893 aattaggatagtcagattgtaatgtgtggctgagatggtttacagtaattttataactgcgttaagctgaaccgtctaattgcaaatgtgtggctgagat 35869992  T
Q  117 tgtttacagcgtgaaacaacgtgctttttctacagcaggcaaacccatccc 167  Q
    || ||  || ||| ||||  |||  |||  |||||||||||||||||||||    
T  35869993 tgatt--agtgtggaacagtgtgtgtttattacagcaggcaaacccatccc 35870041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 16637297 - 16637435
Alignment:
Q  17 aattaggaccgtcagattgtaatgtgtggctgagatggtttacagtgaatttgtaactgcgttaaactgaatcgtctgattgcaaatgtgtggctgagat 116  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16637297 aattaggaccgtcatattgtaatgtgtggctgagatggtttatagtgaatttgtaactgcgttaaactgaaccgtctgattgcaaatgtgtggctgagat 16637396  T
Q  117 tgtttacagcgtgaaacaacgtgctttttctacagcaggcaaacccatc 165  Q
    |||||||||          ||||||||||||||||||||||||||||||    
T  16637397 tgtttacag----------cgtgctttttctacagcaggcaaacccatc 16637435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 17458341 - 17458203
Alignment:
Q  17 aattaggaccgtcagattgtaatgtgtggctgagatggtttacagtgaatttgtaactgcgttaaactgaatcgtctgattgcaaatgtgtggctgagat 116  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17458341 aattaggaccgtcatattgtaatgtgtggctgagatggtttatagtgaatttgtaactgcgttaaactgaaccgtctgattgcaaatgtgtggctgagat 17458242  T
Q  117 tgtttacagcgtgaaacaacgtgctttttctacagcaggcaaacccatc 165  Q
    |||||||||          ||||||||||||||||||||||||||||||    
T  17458241 tgtttacag----------cgtgctttttctacagcaggcaaacccatc 17458203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 17594873 - 17595011
Alignment:
Q  17 aattaggaccgtcagattgtaatgtgtggctgagatggtttacagtgaatttgtaactgcgttaaactgaatcgtctgattgcaaatgtgtggctgagat 116  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17594873 aattaggaccgtcatattgtaatgtgtggctgagatggtttatagtgaatttgtaactgcgttaaactgaaccgtctgattgcaaatgtgtggctgagat 17594972  T
Q  117 tgtttacagcgtgaaacaacgtgctttttctacagcaggcaaacccatc 165  Q
    |||||||||          ||||||||||||||||||||||||||||||    
T  17594973 tgtttacag----------cgtgctttttctacagcaggcaaacccatc 17595011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 26012364 - 26012455
Alignment:
Q  21 aggaccgtcagattgtaatgtgtggctgagatggtttacagtgaatttgtaactgcgttaaactgaatcgtctgattgcaaatgtgtggctg 112  Q
    ||||||||| ||| ||||||||||||||||||||||||| |||| ||| ||||||| |||| ||||| | ||||||||||||||||| ||||    
T  26012364 aggaccgtccgatcgtaatgtgtggctgagatggtttactgtgattttataactgctttaagctgaaccttctgattgcaaatgtgtagctg 26012455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 9e-47; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 17 - 168
Target Start/End: Complemental strand, 12217604 - 12217453
Alignment:
Q  17 aattaggaccgtcagattgtaatgtgtggctgagatggtttacagtgaatttgtaactgcgttaaactgaatcgtctgattgcaaatgtgtggctgagat 116  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  12217604 aattaggaccgtcagattgtaatgtgtggctgagatggtttagagtgattttgtaacagcgttaagctgaaccgtctgattgcaaatgtgtggctgagat 12217505  T
Q  117 tgtttacagcgtgaaacaacgtgctttttctacagcaggcaaacccatcccc 168  Q
    ||||||||| ||| |||   |||  |||  ||||||||||||||||||||||    
T  12217504 tgtttacagtgtggaactgtgtgtgtttattacagcaggcaaacccatcccc 12217453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 38976475 - 38976583
Alignment:
Q  17 aattaggaccgtcagattgtaatgtgtggctgagatggtttacagtgaatttgtaactgcgttaaactgaatcgtctgattgcaaatgtgtggctgagat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||  |||| ||||| ||||||||||||||||||||||    
T  38976475 aattaggaccgtcagattgtaatgtgtggctgagatggtttacagtgattttgtaactgaattaagatgaaccgtctaattgcaaatgtgtggctgagat 38976574  T
Q  117 tgtttacag 125  Q
    |||||||||    
T  38976575 tgtttacag 38976583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 12217607 - 12217640
Alignment:
Q  120 ttacagcgtgaaacaacgtgctttttctacagca 153  Q
    ||||||||||||||| ||||||||||||||||||    
T  12217607 ttacagcgtgaaacagcgtgctttttctacagca 12217640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 6e-42; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 28737221 - 28737372
Alignment:
Q  17 aattaggaccgtcagattgtaatgtgtggctgagatgg-tttacagtgaatttgtaactgcgttaaactgaatcgtctgattgcaaatgtgtggctgaga 115  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  28737221 aattaggacagtcagattgtaatgtgtggctgagatgggtttacagtgattttgtaactgcgttaagctgaaccgtctgattgcaaatgtgtggctgaga 28737320  T
Q  116 ttgtttacagcgtgaaacaacgtgctttttctacagcaggcaaacccatccc 167  Q
    |||||||||| ||| |||   |||  |||  ||| |||||||||||||||||    
T  28737321 ttgtttacagtgtggaactgtgtgtgtttattacggcaggcaaacccatccc 28737372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 373 - 639
Target Start/End: Complemental strand, 12268600 - 12268337
Alignment:
Q  373 ttcagtcatatctaagtcctctggtttcattccattaggaagttcccaattgaagtgatacaacaatgcagctagaggaagctcaatgttagctaagcca 472  Q
    |||||||||||| ||||| |||| ||||||| ||||||||| || ||| | |||||| || |  || ||||| |||||||||||||| || ||||| |||    
T  12268600 ttcagtcatatcaaagtcttctgctttcatttcattaggaattttccagtcgaagtggtaaagtaaggcagccagaggaagctcaatatttgctaaacca 12268501  T
Q  473 agcgaaattcccggacacattcttcttcctcccccaaaagagatgtattcaaagttattactactattcactttattaaattcaaaatctttactgtcct 572  Q
    | | ||| ||| |||||||||||||||||||| ||||||| |||||| | |||| |||   ||  ||||||||||||||| |||||| |  || | || |    
T  12268500 aacaaaactcctggacacattcttcttcctcctccaaaagggatgtactgaaagctat---tatcattcactttattaaaatcaaaaccagtattatcat 12268404  T
Q  573 gaaacctcttaggtataaaattatctgcatcataccaatatttgggatctcttccgattgcctatgc 639  Q
    ||||||||| ||||||||| || ||||||||| ||||||  |||||||||||||| |||||| ||||    
T  12268403 gaaacctctcaggtataaacttctctgcatcagaccaatgattgggatctcttccaattgcccatgc 12268337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 373 - 639
Target Start/End: Original strand, 12425085 - 12425348
Alignment:
Q  373 ttcagtcatatctaagtcctctggtttcattccattaggaagttcccaattgaagtgatacaacaatgcagctagaggaagctcaatgttagctaagcca 472  Q
    ||||||||||||||||||||||  ||||||| ||||||||| || ||| | |||||| || |  |||||||| |||||||||||||| || || ||||||    
T  12425085 ttcagtcatatctaagtcctcttctttcatttcattaggaattttccagtcgaagtggtaaagtaatgcagccagaggaagctcaatatttgccaagcca 12425184  T
Q  473 agcgaaattcccggacacattcttcttcctcccccaaaagagatgtattcaaagttattactactattcactttattaaattcaaaatctttactgtcct 572  Q
    | | ||||||| |||||||||||||||||||| ||||||| ||  || | |||| |||   ||  ||||||||||||||| |||||| |  |||| || |    
T  12425185 aacaaaattcctggacacattcttcttcctcctccaaaagggaaatactgaaagctat---tatcattcactttattaaaatcaaaaccagtactatcat 12425281  T
Q  573 gaaacctcttaggtataaaattatctgcatcataccaatatttgggatctcttccgattgcctatgc 639  Q
    |||||||||  |||||||| || || |||||| |||||| || |||||||||||| |||||| ||||    
T  12425282 gaaacctctccggtataaacttctcagcatcagaccaatgttcgggatctcttccaattgcccatgc 12425348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 28737218 - 28737189
Alignment:
Q  120 ttacagcgtgaaacaacgtgctttttctac 149  Q
    ||||||||||||||||||||||||||||||    
T  28737218 ttacagcgtgaaacaacgtgctttttctac 28737189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 35498393 - 35498498
Alignment:
Q  17 aattaggaccgtcagattgtaatgtgtggctgagatggtttacagtgaatttgtaactgcgttaaactgaatcgtctgattgcaaatgtgtggctgagat 116  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| | ||| |||||||||||| ||||| ||||||||||||||||||||||||| ||    
T  35498393 aattaggaccatcagattgcaatgtgtggctgagatggtttacagtaattttataactgcgttaagctgaaccgtctgattgcaaatgtgtggctgaaat 35498492  T
Q  117 tgttta 122  Q
    ||||||    
T  35498493 tgttta 35498498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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