View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3812_low_19 (Length: 248)
Name: NF3812_low_19
Description: NF3812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3812_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 34884544 - 34884775
Alignment:
| Q |
1 |
cgcaactcggctcccaatgtagcataagtagtcaacacaatatcatatttcctcaactcctcagcatcttgagtcctcctatcaccatagtacatataaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34884544 |
cgcaactcggctcccaatgtagcataagtagtcaacacaatatcatatttcctcaactcctcagcatcttgagtcctcctatcaccatagtacatataaa |
34884643 |
T |
|
| Q |
101 |
ccttcaacgtgccgcggttagtatgttcctccaactgagttatccacgtcgaaatcacagaaggaggacacacaatcaatgtaccatctgtctcactctc |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
34884644 |
ccttcaacgtgccgcggttagtatgttcctccaactgagttatccacgtcgaaatcacagaaggaggacacacaatcaatgtaccatttgtctcactctc |
34884743 |
T |
|
| Q |
201 |
caccctctctacactactcctacctcttttct |
232 |
Q |
| |
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|||||||||||||||||||||||||||||||| |
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|
| T |
34884744 |
caccctctctacactactcctacctcttttct |
34884775 |
T |
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