View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3813_high_51 (Length: 245)
Name: NF3813_high_51
Description: NF3813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3813_high_51 |
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Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 2900714 - 2900940
Alignment:
| Q |
1 |
ttgtcatcattgtagatttttactatatgtatttttaatctcatttataacacaaactaatctggttgttcaattggtcttttacagctgcatacttccc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2900714 |
ttgtcatcattgtagatttttactatatgtatttttaatctcatttataacacaaactaatctggttgttcaattggtcttttacagctgcatacttccc |
2900813 |
T |
|
| Q |
101 |
tgggcgaacagacatcgaatgcttccatcgctggcaaaaggtttcgaatcatgatcttgtaaaaagatcatggacaaaggaggtgctcttttagtgtaaa |
200 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
2900814 |
tggacgaacagacatcgaatgcttccatcgctggcaaaaggtttcgaatcatgatcttgtaaaaagatcatggacaaaggaggtgctattttagtgtaaa |
2900913 |
T |
|
| Q |
201 |
cacttgttataattttttcattgtgcc |
227 |
Q |
| |
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||||||||||||||||||||||||||| |
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| T |
2900914 |
cacttgttataattttttcattgtgcc |
2900940 |
T |
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