View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3813_high_67 (Length: 210)
Name: NF3813_high_67
Description: NF3813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3813_high_67 |
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Alignment Details
Target: chr8 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 6926549 - 6926721
Alignment:
| Q |
22 |
gtgtagtactttggaaacgggtgtggtttggattgtaccttgggtcatcatcttagttcatgcataacacctcaagagtaaagcatcataaacaattcaa |
121 |
Q |
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| T |
6926549 |
gtgtagtactttggaaacgggtgtggtttggattgtaccttcggtcatcatcttagttcatgcacaacaactcaagagtaaagcatcataaacaattcaa |
6926648 |
T |
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| Q |
122 |
gaatgtgctcaagattctactcagatggaaggccgattcctagttctgattttgtttccagtcttattttcat |
194 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6926649 |
gaatgtgctcaagattctactcggatggaaggccgattcctagttctgattttgtttccagtcttattttcat |
6926721 |
T |
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