View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3813_low_13 (Length: 483)

Name: NF3813_low_13
Description: NF3813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3813_low_13
NF3813_low_13
[»] scaffold0065 (1 HSPs)
scaffold0065 (18-473)||(41899-42361)
[»] chr7 (6 HSPs)
chr7 (18-474)||(26177127-26177567)
chr7 (19-307)||(19159943-19160235)
chr7 (19-307)||(20759342-20759634)
chr7 (82-264)||(7811146-7811328)
chr7 (95-153)||(6670736-6670794)
chr7 (353-418)||(7811420-7811485)
[»] chr3 (6 HSPs)
chr3 (16-474)||(2289567-2290030)
chr3 (83-474)||(20304077-20304478)
chr3 (80-307)||(15408904-15409134)
chr3 (55-135)||(3570223-3570304)
chr3 (82-153)||(41760648-41760719)
chr3 (95-153)||(51464881-51464939)
[»] chr5 (3 HSPs)
chr5 (83-474)||(37634812-37635206)
chr5 (95-153)||(25802765-25802823)
chr5 (361-441)||(21345766-21345846)
[»] scaffold0741 (1 HSPs)
scaffold0741 (83-470)||(5989-6383)
[»] chr8 (2 HSPs)
chr8 (79-468)||(25820086-25820481)
chr8 (82-153)||(33858666-33858737)
[»] chr6 (4 HSPs)
chr6 (80-307)||(25823072-25823302)
chr6 (80-307)||(16170767-16170996)
chr6 (55-153)||(21273124-21273225)
chr6 (165-264)||(23667397-23667496)
[»] chr2 (8 HSPs)
chr2 (19-307)||(21862057-21862349)
chr2 (366-455)||(15042331-15042420)
chr2 (82-143)||(22834162-22834223)
chr2 (375-443)||(29807102-29807170)
chr2 (83-153)||(18857023-18857093)
chr2 (168-264)||(22834252-22834348)
chr2 (228-267)||(29807281-29807320)
chr2 (43-121)||(29807433-29807512)
[»] chr1 (8 HSPs)
chr1 (37-229)||(46137016-46137213)
chr1 (82-141)||(15199597-15199656)
chr1 (55-130)||(36776872-36776948)
chr1 (57-153)||(9133247-9133345)
chr1 (94-153)||(159161-159220)
chr1 (81-136)||(15218684-15218739)
chr1 (210-264)||(159281-159335)
chr1 (359-439)||(15218954-15219034)
[»] chr4 (3 HSPs)
chr4 (55-143)||(1656499-1656588)
chr4 (165-264)||(21278862-21278961)
chr4 (82-153)||(31924333-31924404)
[»] scaffold0073 (1 HSPs)
scaffold0073 (55-153)||(40606-40706)
[»] scaffold0044 (1 HSPs)
scaffold0044 (366-442)||(60965-61041)


Alignment Details
Target: scaffold0065 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 18 - 473
Target Start/End: Complemental strand, 42361 - 41899
Alignment:
Q  18 gattatgtagccgacaccaatcagagaaagcaagtcaggaatcattattaccaattctccaatgttccaaaaaa--tgatattcatataaaccgtggaag 115  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||  |||||||||| ||||| |||||||    
T  42361 gattatgtagccgacaccaatcagagaaagcaagtcagg--tcattattaccaattctccgatgttccaaaaaaaatgatattcatttaaacggtggaag 42264  T
Q  116 aggaccctgagagcgggttttatatgaaactttttgcatannnnnnnnat----gagacttggaaacaacctctgtaaatggtacctcggttgctgctgc 211  Q
    ||||||||||||| ||||||||||| |||||||||||| |         |    |||||||||||||||| | |||||||||||||||||||| ||||||    
T  42263 aggaccctgagagtgggttttatataaaactttttgcaaattctttttttttctgagacttggaaacaacatttgtaaatggtacctcggttgttgctgc 42164  T
Q  212 ctttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaacccttcagaaccacaatactactgatatcaagagtttta 311  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||| ||||||||||||    
T  42163 ctttgatagccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaaccctccggagccacaatactactgatgtcaagagtttta 42064  T
Q  312 ttttttacggcagataaattagatatagtatttccctcaag---atttgcaactatatcatcggaaacattctcaagctgcatactaaaagtattattct 408  Q
    |||||||||| |||||||  |||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42063 ttttttacgggagataaaaaagatatagtatttccctcaagattattagcaactatatcatcggaaacattctcaagctgcatactaaaattattattct 41964  T
Q  409 gaataacaggattatgagaagtatgagttaccacaggtgacggaattccttccggagtgtctgtg 473  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||| ||||    
T  41963 gaataacaggactatgagaagtatgaattatcacaggtgacggaattcctcccggagtgtttgtg 41899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 18 - 474
Target Start/End: Complemental strand, 26177567 - 26177127
Alignment:
Q  18 gattatgtagccgacaccaatcagagaaagcaagtcaggaatcattattaccaattctccaatgttccaaaaaatgatattcatataaaccgtggaagag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||    
T  26177567 gattatgtagccgacaccaatcagagaaagcaagtcaggaatcatgattaccaattctccgatgttccaaaaaatgatattcatttaaacggtggaagag 26177468  T
Q  118 gaccctgagagcgggttttatatgaaactttttgcatannnnnnnnat-----gagacttggaaacaacctctgtaaatggtacctcggttgctgctgcc 212  Q
    |||||||||||||||||||||| |||||||||||||||         |     |||||||||||||||||| |||||||||||||||||||| |||||||    
T  26177467 gaccctgagagcgggttttatacgaaactttttgcatattcttttttttttctgagacttggaaacaacctgtgtaaatggtacctcggttgttgctgcc 26177368  T
Q  213 tttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaacccttcagaaccacaatactactgatatcaagagttttat 312  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | || ||||||||||||||||||||||||||||||    
T  26177367 tttgatagccaagtgtgcataaaatctaagtctttttgttgcaccggatctatcttagaatcctccggagccacaatactactgatatcaagagttttat 26177268  T
Q  313 tttttacggcagataaattagatatagtatttccctcaagatttgcaactatatcatcggaaacattctcaagctgcatactaaaagtattattctgaat 412  Q
    ||||||||| |||||||  |||||||||||||||||||||||       ||| ||            ||||||||||||||||||| |||||||||||||    
T  26177267 tttttacgggagataaaacagatatagtatttccctcaagat-------tatttc-----------cctcaagctgcatactaaaattattattctgaat 26177186  T
Q  413 aacaggattatgagaagtatgagttaccacaggtgacggaattccttccggagtgtctgtgc 474  Q
    ||||||| |   |||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  26177185 aacaggact---agaagtatgagttaccacaggtgacggaattcctcccgtaatgtctgtgc 26177127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 19 - 307
Target Start/End: Complemental strand, 19160235 - 19159943
Alignment:
Q  19 attatgtagccgacaccaatcagagaaagcaagtcaggaatcattattaccaattctccaa-tgttccaaaaaatgatattcatataaaccgtggaagag 117  Q
    ||||||||||||||||  ||||||||||||||||| | ||||| |||||||||||  || | | |||||||| || ||||| || ||||| |||||||||    
T  19160235 attatgtagccgacacatatcagagaaagcaagtcggtaatcaatattaccaatttcccgagttttccaaaagataatatttatttaaacggtggaagag 19160136  T
Q  118 gaccctgagagcgggttttatatgaaactttttgcatannnnnnnnat---gagacttggaaacaacctctgtaaatggtacctcggttgctgctgcctt 214  Q
    |||||||||||||||||||||||| |||||||| ||||         |   |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  19160135 gaccctgagagcgggttttatatggaactttttccatatttttcttcttctgagaattggaaacaacctctataaatggtacctcggttgctgctgcctt 19160036  T
Q  215 tgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaacccttcagaaccacaatactactgatatcaagagt 307  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | || ||||||| |||||||||||| ||||    
T  19160035 tgatagccaagtgtgcatgaaatctaagtctttttgtagcaccggatctatcttagaaccctccggagccacaatgctactgatatcatgagt 19159943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 19 - 307
Target Start/End: Complemental strand, 20759634 - 20759342
Alignment:
Q  19 attatgtagccgacaccaatcagagaaagcaagtcaggaatcattattaccaattctccaa-tgttccaaaaaatgatattcatataaaccgtggaagag 117  Q
    ||||||||||||||||  ||||||||||||||||| | ||||| |||||||||||  || | | |||||||| || ||||| || ||||| |||||||||    
T  20759634 attatgtagccgacacatatcagagaaagcaagtcggtaatcaatattaccaatttcccgagttttccaaaagataatatttatttaaacggtggaagag 20759535  T
Q  118 gaccctgagagcgggttttatatgaaactttttgcatannnnnnnnat---gagacttggaaacaacctctgtaaatggtacctcggttgctgctgcctt 214  Q
    |||||||||||||||||||||||| |||||||| ||||         |   |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  20759534 gaccctgagagcgggttttatatggaactttttccatatttttcttcttctgagaattggaaacaacctctataaatggtacctcggttgctgctgcctt 20759435  T
Q  215 tgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaacccttcagaaccacaatactactgatatcaagagt 307  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | || ||||||| |||||||||||| ||||    
T  20759434 tgatagccaagtgtgcatgaaatctaagtctttttgtagcaccggatctatcttagaaccctccggagccacaatgctactgatatcatgagt 20759342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 82 - 264
Target Start/End: Original strand, 7811146 - 7811328
Alignment:
Q  82 ttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgcatannnnnnnnatgagacttggaaacaac 181  Q
    |||||| |||| |||||||| ||||| | ||||||| ||| ||||| |||||||| |||||| |||||| || |         | |||||| ||||| ||    
T  7811146 ttccaagaaataatattcatttaaacggcggaagagtaccttgagaacgggttttgtatgaagcttttttcaaattctttttctaagactttgaaactac 7811245  T
Q  182 ctctgtaaatggtacctcggttgctgctgcctttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatcta 264  Q
    ||||||||||||| | || ||  | |||||||  | |  |||||| ||||||||||||||||||||||| |||||||||||||    
T  7811246 ctctgtaaatggtgcatcagtcacagctgcctccgctaaccaagtttgcataaaatctaagtctttttgcagcaccggatcta 7811328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 6670736 - 6670794
Alignment:
Q  95 tattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgca 153  Q
    ||||||| ||||| | |||||||||||||||||||||||||| |||||| | |||||||    
T  6670736 tattcatttaaacggaggaagaggaccctgagagcgggttttgtatgaagccttttgca 6670794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 418
Target Start/End: Original strand, 7811420 - 7811485
Alignment:
Q  353 atttgcaactatatcatcggaaacattctcaagctgcatactaaaagtattattctgaataacagg 418  Q
    ||||| |||||| ||||| |||||||||||||| ||||  |||||||||||||| || ||||||||    
T  7811420 atttgtaactatctcatcagaaacattctcaagttgcaagctaaaagtattattatgtataacagg 7811485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 16 - 474
Target Start/End: Original strand, 2289567 - 2290030
Alignment:
Q  16 cagattatgtagccgacaccaatcagagaaagcaagtcaggaatcattattaccaattctcc-aatgttccaaaaaatgatattcatataaaccgtggaa 114  Q
    |||||||| |||||||| |  || ||||||||| || |  ||||||||||||||||||| || ||||||||| |||| ||||||||| ||||| ||||||    
T  2289567 cagattatctagccgacccatattagagaaagcgagccgagaatcattattaccaattccccgaatgttccataaaaagatattcatttaaacggtggaa 2289666  T
Q  115 gaggaccctgagagcgggttttatatgaaactttttgcatannnnnnnnatg-agacttggaaacaacctctgtaaatggtacctcggttgctgctgcct 213  Q
    |||||||||||||||  ||||||||||||||||||||||||         |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  2289667 gaggaccctgagagcatgttttatatgaaactttttgcatattctttatttttagacttggaaacaacctctgtaaatggtacctcggttgctgctgcct 2289766  T
Q  214 ttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaacccttcagaaccacaatactactgatatcaagagttttatt 313  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |   || |||||||||||||||||||||||||||||||    
T  2289767 ttgatagccaagtgttcataaaatctaagtctttttgtagcaccggatctatcttagaaccatctggagccacaatactactgatatcaagagttttatt 2289866  T
Q  314 ttttacggcagataaattagatatagtatttccctcaagatt---tgcaactatatcatcggaaacattctcaagctgcatactaaaagtattattctga 410  Q
    |||||||  |||||||  ||||||||||||||| || |||||   |||||||||||||||| ||||||||||||||||||| |||||| ||| |||||||    
T  2289867 ttttacgagagataaaacagatatagtatttccatccagattatgtgcaactatatcatcgaaaacattctcaagctgcatgctaaaattatgattctga 2289966  T
Q  411 ataacaggattatgagaagtatgagttaccacaggtgacggaattccttccggagtgtctgtgc 474  Q
    ||||||||| ||||||||  ||||||||||||| |||| ||||||||| ||||||||| |||||    
T  2289967 ataacaggactatgagaaaaatgagttaccacaagtgatggaattcctcccggagtgtttgtgc 2290030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 83 - 474
Target Start/End: Original strand, 20304077 - 20304478
Alignment:
Q  83 tccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgcatannnnnnnnat----------gagactt 172  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||         |          |||||||    
T  20304077 tccaaaacatgatattcatttaaacggtggaagaggaccctgagagcgggttttatatgaaactttttgcatatttttttttttgttttttctgagactt 20304176  T
Q  173 ggaaacaacctctgtaaatggtacctcggttgctgctgcctttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaa 272  Q
    ||||||||| | |||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20304177 ggaaacaacttgtgtaaatggtacctcggtagctgctggctttgatagccaagtgtgcataaaatctaagtctttttgtagcaccagatctatcttagaa 20304276  T
Q  273 cccttcagaaccacaatactactgatatcaagagttttattttttacggcagataaattagatatagtatttccctcaag---atttgcaactatatcat 369  Q
    ||||   || ||||||||||||||||||||||||||||||||||||||| |||||||  | ||||||||||||||||| |   ||| |||||||||||||    
T  20304277 ccctcgggagccacaatactactgatatcaagagttttattttttacgggagataaaacatatatagtatttccctcaggattattagcaactatatcat 20304376  T
Q  370 cggaaacattctcaagctgcatactaaaagtattattctgaataacaggattatgagaagtatgagttaccacaggtgacggaattccttccggagtgtc 469  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |   |||||||||||||||||||||||||||||||||| ||||||||||    
T  20304377 cggaaacattctcaagctgcatactaaaattattattctgaataacaggact---agaagtatgagttaccacaggtgacggaattcctcccggagtgtc 20304473  T
Q  470 tgtgc 474  Q
    |||||    
T  20304474 tgtgc 20304478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 15409134 - 15408904
Alignment:
Q  80 tgttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgcatannnnnnnnat---gagacttggaa 176  Q
    |||||||||| ||||||||||| || || ||||||||||||| ||||||||||||||||||| || ||||||||||         |   |||||||||||    
T  15409134 tgttccaaaagatgatattcatttagacggtggaagaggaccttgagagcgggttttatatggaattttttgcatatttttcttcttctgagacttggaa 15409035  T
Q  177 acaacctctgtaaatggtacctcggttgctgctgcctttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaaccct 276  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15409034 acaacctctataaatggtacctcggttgctgctgcctttgatagccaagtgtgcatgaaatctaagtctttttgtagcaccggatctatcttagaaccct 15408935  T
Q  277 tcagaaccacaatactactgatatcaagagt 307  Q
     | || ||||||| |||||||||||||||||    
T  15408934 ccggagccacaatgctactgatatcaagagt 15408904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 3570223 - 3570304
Alignment:
Q  55 ggaatcattattaccaattctcc-aatgttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttt 135  Q
    |||||||||||||||||| | || ||  ||||||||||| |||||||| ||||| | |||||||| || |||||||||||||    
T  3570223 ggaatcattattaccaatcccccgaactttccaaaaaataatattcatttaaacggaggaagaggtccttgagagcgggttt 3570304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 41760648 - 41760719
Alignment:
Q  82 ttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgca 153  Q
    |||||| |||| |||||||| ||||| ||||  | |||||||||||||||||||| |||| ||| |||||||    
T  41760648 ttccaataaataatattcatttaaacggtgggcggggaccctgagagcgggttttgtatgcaaccttttgca 41760719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 51464881 - 51464939
Alignment:
Q  95 tattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgca 153  Q
    ||||||| ||||| | ||||||||||||||||||| |||||| |||||| | |||||||    
T  51464881 tattcatttaaacggaggaagaggaccctgagagctggttttgtatgaagccttttgca 51464939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 83 - 474
Target Start/End: Original strand, 37634812 - 37635206
Alignment:
Q  83 tccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgcatannnnnnnnat---gagacttggaaaca 179  Q
    ||||||| ||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||         |   ||||||||||||||    
T  37634812 tccaaaacatgatattcatttaaacggtggaagaggaccatgagagcgggttttatatgaaactttttgcatattcttttttttctgagacttggaaaca 37634911  T
Q  180 acctctgtaaatggtacctcggttgctgctgcctttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaacccttca 279  Q
    |||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||       
T  37634912 acctgtgtaaatggtacctcggtagctgctgcctttgatagccaagtgtgcataaaatccaagtctttttgtagcaccggatctatcttagaaccctcgg 37635011  T
Q  280 gaaccacaatactactgatatcaagagttttattttttacggcagataaattagatatagtatttccctcaag---atttgcaactatatcatcggaaac 376  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||   ||| ||||||||||||||||||||    
T  37635012 gagccacaatactactgatatcaagagttttattttttacgggagataaaacagatatagtatttccctcaagattattagcaactatatcatcggaaac 37635111  T
Q  377 attctcaagctgcatactaaaagtattattctgaataacaggattatgagaagtatgagttaccacaggtgacggaattccttccggagtgtctgtgc 474  Q
    |||||||||||||||||||||| ||||||| | ||||||| || |   |||||||||||||||||||||||||| ||||||| || ||||||||||||    
T  37635112 attctcaagctgcatactaaaattattattttaaataacatgact---agaagtatgagttaccacaggtgacgaaattcctcccagagtgtctgtgc 37635206  T

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Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 25802823 - 25802765
Alignment:
Q  95 tattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgca 153  Q
    ||||||| ||||| | |||||||||||||||||||||||||| |||||| | |||||||    
T  25802823 tattcatttaaacggaggaagaggaccctgagagcgggttttgtatgaagccttttgca 25802765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 441
Target Start/End: Original strand, 21345766 - 21345846
Alignment:
Q  361 ctatatcatcggaaacattctcaagctgcatactaaaagtattattctgaataacaggattatgagaagtatgagttacca 441  Q
    |||| ||||| || ||||||||||| || || ||||||||||||||   |||| ||||  |||||||| ||||||||||||    
T  21345766 ctatctcatcagatacattctcaagttgaatgctaaaagtattattagtaatagcagggctatgagaaatatgagttacca 21345846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 83 - 470
Target Start/End: Complemental strand, 6383 - 5989
Alignment:
Q  83 tccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgcatannnnnnnnat-----gagacttggaaa 177  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||         |     ||||||||||||    
T  6383 tccaaaacatgatattcatttaaacggtggaagaggaccctgagagcgggttttatatgaaactttttgcatattcttttttttttctgagacttggaaa 6284  T
Q  178 caacctctgtaaatggtacctcggttgctgctgcctttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaaccctt 277  Q
    |||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||     
T  6283 caacctgtgtaaatggtacctcggtagctgctgcctttgatagccaagtgtgcataaaatccaagtctttttgtagcaccgaatctatcttagaaccctc 6184  T
Q  278 cagaaccacaatactactgatatcaagagttttatttttta-cggcagataaattagatatagtatttccctcaagattt----gcaactatatcatcgg 372  Q
      || ||||||||||| ||||||||||||||||||||||||  || |||||||  |||||||||||||||||||||||||    ||||||||||||||||    
T  6183 gggagccacaatactattgatatcaagagttttattttttatggggagataaaacagatatagtatttccctcaagatttattagcaactatatcatcgg 6084  T
Q  373 aaacattctcaagctgcatactaaaagtattattctgaataacaggattatgagaagtatgagttaccacaggtgacggaattccttccggagtgtct 470  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||| ||||||| || ||||||||    
T  6083 aaacattctcaagctgcatactaaaagtattattctgaataacaggact---agaagtatgagttaccacaggtgacgaaattcctcccagagtgtct 5989  T

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Target: chr8 (Bit Score: 156; Significance: 1e-82; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 79 - 468
Target Start/End: Complemental strand, 25820481 - 25820086
Alignment:
Q  79 atgttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgcatannnnnnnnat---gagacttgga 175  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||||||||| ||||| |||| |||||||||||||         |   ||||||| ||    
T  25820481 atgttccaaaaaattatattcatttaaacggtggaagaggaccctgagagcgagttttgtatggaactttttgcatattcttatttttccgagactttga 25820382  T
Q  176 aacaacctctgtaaatggtacctcggttgctgctgcctttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaaccc 275  Q
     ||||||||||||||||||||||||||||||||||| || ||| ||||| || |||||||||| |||||||||||||||||||||||| ||| |||||||    
T  25820381 cacaacctctgtaaatggtacctcggttgctgctgctttagatagccaattgcgcataaaatccaagtctttttgtagcaccggatctgtctgagaaccc 25820282  T
Q  276 ttcagaaccacaatactactgatatcaagagttttattttttacggcagataaattagatatagtatttccctcaa---gatttgcaactatatcatcgg 372  Q
    | |  | ||||||| |||||||||||||||||||||||||| || | |||||||  |   ||||| ||||||||||    |||||||| |||||| || |    
T  25820281 tccgaagccacaatgctactgatatcaagagttttatttttcacaggagataaaacaacgatagtgtttccctcaatattatttgcaattatatcgtctg 25820182  T
Q  373 aaacattctcaagctgcatactaaaagtattattctgaataacaggattatgagaagtatgagttaccacaggtgacggaattccttccggagtgt 468  Q
    |||| |||||||| |||||||||||||| | ||| ||||||||||||  ||||||||  |||||||||| |||||||||||||||| |||| ||||    
T  25820181 aaactttctcaagatgcatactaaaagtgtgattatgaataacaggacgatgagaagagtgagttaccataggtgacggaattcctcccggggtgt 25820086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 33858666 - 33858737
Alignment:
Q  82 ttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgca 153  Q
    |||||| |||| |||||||| ||||| ||||  | |||||||||||||||||||| |||| ||| |||||||    
T  33858666 ttccaataaataatattcatttaaacggtgggcggggaccctgagagcgggttttgtatgcaaccttttgca 33858737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 2e-71; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 25823302 - 25823072
Alignment:
Q  80 tgttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgcatannnnnnnnat---gagacttggaa 176  Q
    |||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||||| || ||||||||||         |   |||||||||||    
T  25823302 tgttccaaaagatgatattcatttagacggtggaagaggaccctgagagcgggttttatatggaattttttgcatatttttcttcttctgagacttggaa 25823203  T
Q  177 acaacctctgtaaatggtacctcggttgctgctgcctttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaaccct 276  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25823202 acaacctctataaatggtacctcggttgctgctgcctttgatagccaagtgtgcatgaaatctaagtctttttgtagcaccggatctatcttagaaccct 25823103  T
Q  277 tcagaaccacaatactactgatatcaagagt 307  Q
     | || ||||||| |||||||||||||||||    
T  25823102 ccggagccacaatgctactgatatcaagagt 25823072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 16170996 - 16170767
Alignment:
Q  80 tgttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgcatannnnnnnnat---gagacttggaa 176  Q
    |||||||||| ||||||||||| || || ||||||||||||| ||||||||||||||||||| || ||||||||||         |   ||||||| |||    
T  16170996 tgttccaaaagatgatattcatttagacggtggaagaggacc-tgagagcgggttttatatggaattttttgcatatttttcttcttctgagacttagaa 16170898  T
Q  177 acaacctctgtaaatggtacctcggttgctgctgcctttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaaccct 276  Q
    | ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  16170897 ataacctctataaatggtacctcggttgctgctgcctttgatagccaagtgtgcatgaaatctaagtctttttgtaacaccggatctatcttagaaccct 16170798  T
Q  277 tcagaaccacaatactactgatatcaagagt 307  Q
    || || |||||||||||||||||||| ||||    
T  16170797 tcggagccacaatactactgatatcaggagt 16170767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 153
Target Start/End: Complemental strand, 21273225 - 21273124
Alignment:
Q  55 ggaatcattattaccaattctcca-atgttccaaaaaatga--tattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttg 151  Q
    |||||||||||||||||| | ||  |||||||||||||  |  ||||||| ||||| | |||||||||||||||||||||||||| |||||| | |||||    
T  21273225 ggaatcattattaccaatcccccggatgttccaaaaaaaaaaatattcatttaaacggaggaagaggaccctgagagcgggttttgtatgaagccttttg 21273126  T
Q  152 ca 153  Q
    ||    
T  21273125 ca 21273124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 264
Target Start/End: Original strand, 23667397 - 23667496
Alignment:
Q  165 tgagacttggaaacaacctctgtaaatggtacctcggttgctgctgcctttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatcta 264  Q
    |||||||||||||| |||||| ||||||| |||||  |  | || ||||||| | ||||||| |||||||||||||| ||||| || | |||||| ||||    
T  23667397 tgagacttggaaactacctctttaaatggcacctcattcacagcagcctttgctagccaagtttgcataaaatctaattctttctgcaacaccgggtcta 23667496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 119; Significance: 1e-60; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 19 - 307
Target Start/End: Complemental strand, 21862349 - 21862057
Alignment:
Q  19 attatgtagccgacaccaatcagagaaagcaagtcaggaatcattattaccaat-tctccaatgttccaaaaaatgatattcatataaaccgtggaagag 117  Q
    |||| |||||||||||  ||||||||||||||||| | ||||| |||||||||| || |   |||||||||| ||||||||||| ||||  |||||||||    
T  21862349 attacgtagccgacacatatcagagaaagcaagtcggtaatcaatattaccaatgtcccgggtgttccaaaagatgatattcatttaaatggtggaagag 21862250  T
Q  118 gaccctgagagcgggttttatatgaaactttttgcatannnnnnnnat---gagacttggaaacaacctctgtaaatggtacctcggttgctgctgcctt 214  Q
    |||||||||||||||||||||||| ||| |||| || |         |   ||||||||||||||| |||| ||||||||||||||| |||| || ||||    
T  21862249 gaccctgagagcgggttttatatggaacattttccacatttttcttcttctgagacttggaaacaatctctataaatggtacctcggatgctcctacctt 21862150  T
Q  215 tgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatctatcttagaacccttcagaaccacaatactactgatatcaagagt 307  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | || |||||||  |||||||||| |||||    
T  21862149 tgatagccaagtgtgcatgaaatctaagtctttttgtagcaccggatctatcttagaaccctccggagccacaatgttactgatatctagagt 21862057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 455
Target Start/End: Complemental strand, 15042420 - 15042331
Alignment:
Q  366 tcatcggaaacattctcaagctgcatactaaaagtattattctgaataacaggattatgagaagtatgagttaccacaggtgacggaatt 455  Q
    |||||||||||||||||||| |||||  |||| ||||||||   |||||||||| |||||||||||| ||||||||| |||| |||||||    
T  15042420 tcatcggaaacattctcaagttgcattgtaaatgtattattaataataacaggagtatgagaagtatcagttaccaccggtgtcggaatt 15042331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 22834162 - 22834223
Alignment:
Q  82 ttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaa 143  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||    
T  22834162 ttccaaaaaataatattcatttaaacagtggaagaggaccctgagagcgggttttttatgaa 22834223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 443
Target Start/End: Complemental strand, 29807170 - 29807102
Alignment:
Q  375 acattctcaagctgcatactaaaagtattattctgaataacaggattatgagaagtatgagttaccaca 443  Q
    ||||||||||| |||||||||||||||||||| | | ||||| || | |||||||||||||||||||||    
T  29807170 acattctcaagttgcatactaaaagtattattattattaacaagactgtgagaagtatgagttaccaca 29807102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 18857093 - 18857023
Alignment:
Q  83 tccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgca 153  Q
    |||||||| | |||||||| ||||| | ||||||||||| |||||||||||||| |||||| | |||||||    
T  18857093 tccaaaaactaatattcatttaaacggaggaagaggaccttgagagcgggttttgtatgaagccttttgca 18857023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 264
Target Start/End: Original strand, 22834252 - 22834348
Alignment:
Q  168 gacttggaaacaacctctgtaaatggtacctcggttgctgctgcctttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatcta 264  Q
    ||||| ||||| |||||| ||||||| |||||  |  | || ||||||| | ||||||| ||||||||||||||||| || || |||||||||||||    
T  22834252 gactttgaaactacctctttaaatggcacctcattcacagcagcctttgctagccaagtttgcataaaatctaagtccttctgcagcaccggatcta 22834348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 29807320 - 29807281
Alignment:
Q  228 tgcataaaatctaagtctttttgtagcaccggatctatct 267  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  29807320 tgcataaaatctaagtccttctgtagcaccggatctatct 29807281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 29807512 - 29807433
Alignment:
Q  43 gaaagcaagtcaggaatcattattaccaattctcc-aatgttccaaaaaatgatattcatataaaccgtggaagaggacc 121  Q
    ||||||||| | |||||||||||||||||| ||||  ||||||||| |||| ||||| || ||| | |||||||||||||    
T  29807512 gaaagcaagacgggaatcattattaccaatcctccggatgttccaataaataatatttatttaagcggtggaagaggacc 29807433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 37 - 229
Target Start/End: Complemental strand, 46137213 - 46137016
Alignment:
Q  37 atcagagaaagcaagtcaggaatcattattaccaattctcca-atgttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttt 135  Q
    ||||||||||||||||| ||||||| |||||||||||| ||  |||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||    
T  46137213 atcagagaaagcaagtcgggaatcaatattaccaattccccggatgttccaaaaaataatattcatttaaacggtggaagaggaccttgagagcgggttt 46137114  T
Q  136 tatatgaa----actttttgcatannnnnnnnatgagacttggaaacaacctctgtaaatggtacctcggttgctgctgcctttgatggccaagtgtg 229  Q
    ||||||||    | |||||   |          ||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| ||||||||||    
T  46137113 tatatgaatagcatttttttttttttcttcttctgagacttggaaacaacctctataaatgatacctcggttgctgctgtctttgatagccaagtgtg 46137016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 141
Target Start/End: Original strand, 15199597 - 15199656
Alignment:
Q  82 ttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatg 141  Q
    ||||||||||| |||| ||| ||||| |||||||||||||||||||||||||||| ||||    
T  15199597 ttccaaaaaataatatacatttaaacggtggaagaggaccctgagagcgggttttgtatg 15199656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 130
Target Start/End: Original strand, 36776872 - 36776948
Alignment:
Q  55 ggaatcattattaccaattctcc-aatgttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcg 130  Q
    |||| ||||||||||||| | || ||||||||||||||| ||||| || ||||| | ||||||||||||||||||||    
T  36776872 ggaaccattattaccaatcccccgaatgttccaaaaaataatatttatttaaacagaggaagaggaccctgagagcg 36776948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 9133247 - 9133345
Alignment:
Q  57 aatcattattaccaattctcca-atgttccaaaaaatg-atattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgca 153  Q
    |||||||||||||||| | ||  |||||||||||||   |||||||| ||||| | ||||||||||| |||||||||||||| |||||| | |||||||    
T  9133247 aatcattattaccaatcccccggatgttccaaaaaaaatatattcatttaaacggaggaagaggaccttgagagcgggttttgtatgaagccttttgca 9133345  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 159161 - 159220
Alignment:
Q  94 atattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgca 153  Q
    |||||||| ||||| | |||||||||||||||||||||||||| || ||| | |||||||    
T  159161 atattcatttaaacggaggaagaggaccctgagagcgggttttgtaagaacccttttgca 159220  T

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Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 15218684 - 15218739
Alignment:
Q  81 gttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggtttt 136  Q
    |||| ||||||| |||||||| ||||| |||||||||||||||||||  |||||||    
T  15218684 gttctaaaaaataatattcatttaaacggtggaagaggaccctgagaatgggtttt 15218739  T

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Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 159281 - 159335
Alignment:
Q  210 gcctttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatcta 264  Q
    ||||||| | ||||||| |||||||||||||||||||| || |||||||| ||||    
T  159281 gcctttgctagccaagtttgcataaaatctaagtctttctgcagcaccgggtcta 159335  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 439
Target Start/End: Original strand, 15218954 - 15219034
Alignment:
Q  359 aactatatcatcggaaacattctcaagctgcatactaaaagtattattctgaataacaggattatgagaagtatgagttac 439  Q
    |||||| ||||| || ||||||||||| || || |||||||||||||  | |||| ||||| |||||||| || |||||||    
T  15218954 aactatgtcatcagatacattctcaagttgtatgctaaaagtattatcattaatagcaggactatgagaaataggagttac 15219034  T

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Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 1656588 - 1656499
Alignment:
Q  55 ggaatcattattaccaattctcc-aatgttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaa 143  Q
    |||||||||||||||||| | || ||||||  ||||||| |||||||| ||||   | ||||||| ||||||||||||||||||||||||    
T  1656588 ggaatcattattaccaatcccccgaatgtttaaaaaaataatattcatttaaagaatagaagaggtccctgagagcgggttttatatgaa 1656499  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 264
Target Start/End: Complemental strand, 21278961 - 21278862
Alignment:
Q  165 tgagacttggaaacaacctctgtaaatggtacctcggttgctgctgcctttgatggccaagtgtgcataaaatctaagtctttttgtagcaccggatcta 264  Q
    |||||||| ||||| |||||| ||||||| |||||  |  | ||  |||||| | ||||||| |||||||||||||||||||| || |||||||| ||||    
T  21278961 tgagactttgaaactacctctttaaatggcacctcattcacagcatcctttgctagccaagtttgcataaaatctaagtctttctgcagcaccgggtcta 21278862  T

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Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 31924404 - 31924333
Alignment:
Q  82 ttccaaaaaatgatattcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgca 153  Q
    |||||| |||| |||||||| ||||| ||||  | |||||||||||||||||||| |||| ||| |||||||    
T  31924404 ttccaataaataatattcatttaaacggtgggcggggaccctgagagcgggttttgtatgcaaccttttgca 31924333  T

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Target: scaffold0073 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 40606 - 40706
Alignment:
Q  55 ggaatcattattaccaattctcc-aatgttccaaaaaatgat-attcatataaaccgtggaagaggaccctgagagcgggttttatatgaaactttttgc 152  Q
    |||||||||||||||||| | || ||| |||||||| |  || |||||| |||||   |||||||||||||||||||||||||| |||||| | ||||||    
T  40606 ggaatcattattaccaatcccccgaatcttccaaaacaaaattattcatttaaacgaaggaagaggaccctgagagcgggttttgtatgaagccttttgc 40705  T
Q  153 a 153  Q
    |    
T  40706 a 40706  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 442
Target Start/End: Complemental strand, 61041 - 60965
Alignment:
Q  366 tcatcggaaacattctcaagctgcatactaaaagtattattctgaataacaggattatgagaagtatgagttaccac 442  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||   ||||| |||| |||||||||||  |||||||||    
T  61041 tcatcggacacattctcaagttgcatgctaaatgtattattaataataaaaggagtatgagaagtagcagttaccac 60965  T

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