View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3813_low_4 (Length: 636)

Name: NF3813_low_4
Description: NF3813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3813_low_4
NF3813_low_4
[»] chr3 (83 HSPs)
chr3 (365-517)||(3755923-3756075)
chr3 (46-273)||(3745912-3746139)
chr3 (114-273)||(3754504-3754663)
chr3 (125-273)||(4157943-4158094)
chr3 (112-273)||(4142120-4142284)
chr3 (107-219)||(2678380-2678492)
chr3 (119-220)||(803211-803312)
chr3 (112-219)||(2459233-2459340)
chr3 (119-221)||(2696725-2696827)
chr3 (325-430)||(2679196-2679301)
chr3 (325-430)||(2687103-2687208)
chr3 (113-219)||(2686299-2686408)
chr3 (125-215)||(956343-956433)
chr3 (112-218)||(1891050-1891156)
chr3 (322-422)||(2651167-2651267)
chr3 (571-627)||(38886861-38886917)
chr3 (571-627)||(53046938-53046994)
chr3 (126-176)||(2631358-2631408)
chr3 (295-421)||(3745166-3745292)
chr3 (571-625)||(47501184-47501238)
chr3 (325-425)||(967863-967963)
chr3 (325-425)||(1891807-1891907)
chr3 (126-177)||(2644362-2644413)
chr3 (126-177)||(2659152-2659203)
chr3 (571-625)||(860689-860743)
chr3 (571-625)||(10267381-10267435)
chr3 (571-625)||(23777254-23777308)
chr3 (111-173)||(37757721-37757783)
chr3 (571-625)||(37760888-37760942)
chr3 (575-625)||(51654745-51654795)
chr3 (115-176)||(2492083-2492144)
chr3 (128-177)||(13498224-13498273)
chr3 (571-624)||(20876519-20876572)
chr3 (571-627)||(836843-836899)
chr3 (301-425)||(955541-955665)
chr3 (295-419)||(4158675-4158799)
chr3 (337-425)||(9497236-9497324)
chr3 (126-177)||(754609-754660)
chr3 (128-219)||(968629-968720)
chr3 (126-177)||(37753345-37753396)
chr3 (114-177)||(43991960-43992023)
chr3 (112-214)||(989359-989461)
chr3 (125-215)||(1007423-1007513)
chr3 (125-215)||(1022451-1022541)
chr3 (125-219)||(1936979-1937073)
chr3 (115-177)||(7324420-7324482)
chr3 (125-207)||(7432053-7432135)
chr3 (571-625)||(25916720-25916774)
chr3 (112-177)||(783785-783850)
chr3 (325-422)||(7432842-7432939)
chr3 (115-176)||(7442966-7443027)
chr3 (128-177)||(9561987-9562036)
chr3 (572-621)||(11523319-11523368)
chr3 (319-396)||(44000819-44000896)
chr3 (302-374)||(1898388-1898460)
chr3 (302-374)||(1907834-1907906)
chr3 (125-177)||(2442039-2442091)
chr3 (302-374)||(2931177-2931249)
chr3 (580-624)||(11454797-11454841)
chr3 (322-422)||(13478816-13478916)
chr3 (113-165)||(23234853-23234905)
chr3 (571-627)||(36642765-36642821)
chr3 (126-165)||(746383-746422)
chr3 (125-184)||(1940578-1940637)
chr3 (27-82)||(2442134-2442189)
chr3 (126-177)||(2456249-2456300)
chr3 (126-177)||(9565829-9565880)
chr3 (295-425)||(803952-804082)
chr3 (115-177)||(2476634-2476696)
chr3 (571-625)||(24365958-24366012)
chr3 (322-396)||(43991261-43991335)
chr3 (571-625)||(46452587-46452641)
chr3 (130-187)||(997566-997623)
chr3 (130-187)||(1013956-1014013)
chr3 (316-425)||(1937714-1937823)
chr3 (329-358)||(3756070-3756099)
chr3 (112-177)||(7942485-7942550)
chr3 (126-171)||(9587185-9587230)
chr3 (124-165)||(23197024-23197065)
chr3 (294-374)||(988658-988738)
chr3 (381-425)||(1931968-1932012)
chr3 (571-627)||(2702471-2702527)
chr3 (295-419)||(4142865-4142989)
[»] chr5 (38 HSPs)
chr5 (35-273)||(11081714-11081955)
chr5 (289-425)||(23764979-23765115)
chr5 (289-425)||(23814827-23814963)
chr5 (290-425)||(23774793-23774928)
chr5 (290-425)||(23861746-23861881)
chr5 (289-425)||(23754758-23754894)
chr5 (289-425)||(23820213-23820349)
chr5 (571-625)||(14164232-14164286)
chr5 (125-187)||(23766861-23766923)
chr5 (125-187)||(23816709-23816771)
chr5 (571-625)||(41511688-41511742)
chr5 (575-624)||(9487359-9487408)
chr5 (305-421)||(11081377-11081493)
chr5 (575-627)||(19322778-19322830)
chr5 (571-627)||(20563310-20563366)
chr5 (571-625)||(7129209-7129263)
chr5 (571-625)||(38110591-38110645)
chr5 (571-625)||(43394593-43394647)
chr5 (571-624)||(19123506-19123559)
chr5 (577-625)||(10409937-10409985)
chr5 (577-625)||(23141383-23141431)
chr5 (571-625)||(16306110-16306164)
chr5 (125-179)||(23769645-23769699)
chr5 (125-179)||(23819493-23819547)
chr5 (571-625)||(41092295-41092349)
chr5 (128-177)||(20292995-20293044)
chr5 (128-177)||(20305856-20305905)
chr5 (128-177)||(20310260-20310309)
chr5 (114-215)||(23861014-23861115)
chr5 (571-624)||(26522737-26522790)
chr5 (127-179)||(3181715-3181767)
chr5 (571-627)||(16529360-16529416)
chr5 (571-625)||(7672771-7672825)
chr5 (571-625)||(16538199-16538253)
chr5 (295-441)||(23691137-23691283)
chr5 (571-625)||(38004061-38004115)
chr5 (128-177)||(20301443-20301492)
chr5 (114-179)||(23732165-23732230)
[»] chr1 (32 HSPs)
chr1 (571-624)||(47791421-47791474)
chr1 (571-625)||(21618815-21618869)
chr1 (571-624)||(39282407-39282460)
chr1 (571-627)||(16165215-16165271)
chr1 (571-627)||(27296729-27296785)
chr1 (571-630)||(44264529-44264588)
chr1 (571-625)||(1648271-1648325)
chr1 (571-625)||(4099919-4099973)
chr1 (571-625)||(12116080-12116134)
chr1 (571-625)||(25931361-25931415)
chr1 (575-625)||(52741033-52741083)
chr1 (571-620)||(21618695-21618744)
chr1 (571-624)||(21882783-21882836)
chr1 (571-627)||(1155700-1155756)
chr1 (571-627)||(38685754-38685810)
chr1 (571-623)||(44099254-44099306)
chr1 (577-625)||(48411610-48411658)
chr1 (571-626)||(319015-319070)
chr1 (573-624)||(18913125-18913176)
chr1 (571-630)||(44451688-44451747)
chr1 (112-171)||(51381441-51381500)
chr1 (571-625)||(3226509-3226562)
chr1 (571-625)||(24595624-24595678)
chr1 (571-625)||(28949534-28949588)
chr1 (115-172)||(51407548-51407605)
chr1 (579-627)||(52407505-52407553)
chr1 (315-374)||(51831647-51831706)
chr1 (115-178)||(51858605-51858668)
chr1 (115-181)||(51782795-51782861)
chr1 (575-624)||(6537135-6537184)
chr1 (125-165)||(25609376-25609416)
chr1 (322-374)||(51382202-51382254)
[»] chr4 (30 HSPs)
chr4 (294-429)||(22672866-22673001)
chr4 (325-425)||(20020548-20020648)
chr4 (571-627)||(54652907-54652963)
chr4 (571-625)||(2479059-2479113)
chr4 (125-219)||(20019771-20019865)
chr4 (571-625)||(36639760-36639814)
chr4 (571-625)||(52688616-52688670)
chr4 (571-624)||(22293676-22293729)
chr4 (571-624)||(28379323-28379376)
chr4 (571-624)||(47427804-47427857)
chr4 (571-625)||(2177825-2177879)
chr4 (571-625)||(8478541-8478595)
chr4 (571-625)||(12795520-12795574)
chr4 (571-625)||(18000280-18000334)
chr4 (571-625)||(23952151-23952205)
chr4 (575-625)||(53143042-53143092)
chr4 (576-625)||(4942393-4942442)
chr4 (571-624)||(28813910-28813963)
chr4 (575-624)||(41850895-41850944)
chr4 (576-625)||(44500944-44500993)
chr4 (571-624)||(47769362-47769415)
chr4 (571-620)||(52688741-52688790)
chr4 (571-627)||(48076769-48076825)
chr4 (125-187)||(20016184-20016247)
chr4 (575-625)||(8119293-8119343)
chr4 (571-625)||(29968571-29968625)
chr4 (571-625)||(32010509-32010563)
chr4 (572-610)||(8396927-8396965)
chr4 (571-625)||(24050944-24050998)
chr4 (571-625)||(37325303-37325357)
[»] scaffold0097 (1 HSPs)
scaffold0097 (571-627)||(13441-13497)
[»] chr8 (20 HSPs)
chr8 (571-627)||(38111716-38111772)
chr8 (571-624)||(30206529-30206582)
chr8 (571-627)||(14683415-14683471)
chr8 (571-625)||(23959929-23959983)
chr8 (575-625)||(35618029-35618079)
chr8 (571-625)||(39921869-39921923)
chr8 (571-625)||(42046069-42046123)
chr8 (571-627)||(603889-603945)
chr8 (301-425)||(19727111-19727235)
chr8 (571-627)||(44434613-44434669)
chr8 (571-625)||(23086385-23086439)
chr8 (571-625)||(37197321-37197375)
chr8 (571-624)||(9389506-9389559)
chr8 (571-624)||(32063223-32063276)
chr8 (571-627)||(27853009-27853065)
chr8 (582-625)||(1199865-1199908)
chr8 (310-417)||(31145148-31145255)
chr8 (574-625)||(34948251-34948302)
chr8 (571-621)||(44015142-44015192)
chr8 (571-599)||(13461335-13461363)
[»] chr7 (33 HSPs)
chr7 (571-627)||(16673914-16673970)
chr7 (571-627)||(17648282-17648338)
chr7 (571-625)||(6250458-6250512)
chr7 (571-625)||(21128806-21128860)
chr7 (571-625)||(32277678-32277732)
chr7 (175-250)||(1078227-1078302)
chr7 (571-625)||(2354069-2354123)
chr7 (567-625)||(4680541-4680599)
chr7 (571-625)||(4681267-4681321)
chr7 (571-621)||(12140501-12140551)
chr7 (575-625)||(34838269-34838319)
chr7 (575-625)||(40449392-40449442)
chr7 (571-625)||(40686184-40686238)
chr7 (577-626)||(2852855-2852904)
chr7 (571-624)||(22967792-22967845)
chr7 (575-624)||(45418327-45418376)
chr7 (575-627)||(5553589-5553641)
chr7 (571-627)||(22325027-22325083)
chr7 (571-627)||(35125518-35125574)
chr7 (571-626)||(16491640-16491695)
chr7 (571-625)||(9141017-9141071)
chr7 (571-625)||(16362202-16362256)
chr7 (571-624)||(22773548-22773601)
chr7 (571-624)||(30991684-30991737)
chr7 (580-624)||(11650202-11650246)
chr7 (570-626)||(24787382-24787438)
chr7 (575-627)||(27711963-27712015)
chr7 (574-625)||(1565978-1566029)
chr7 (571-610)||(21225067-21225106)
chr7 (571-625)||(11642170-11642224)
chr7 (571-625)||(18487930-18487984)
chr7 (294-395)||(39298401-39298502)
chr7 (571-624)||(40409202-40409254)
[»] chr2 (24 HSPs)
chr2 (571-627)||(20709602-20709658)
chr2 (571-625)||(833309-833363)
chr2 (571-625)||(2132001-2132055)
chr2 (571-625)||(11658246-11658300)
chr2 (571-625)||(28611551-28611605)
chr2 (571-625)||(37130788-37130842)
chr2 (122-177)||(36577366-36577421)
chr2 (571-625)||(8430593-8430646)
chr2 (575-625)||(14335856-14335906)
chr2 (571-625)||(20639808-20639862)
chr2 (572-625)||(10128811-10128864)
chr2 (571-624)||(11736855-11736908)
chr2 (575-624)||(41327167-41327216)
chr2 (567-627)||(6348476-6348536)
chr2 (126-178)||(33038159-33038211)
chr2 (571-625)||(12896069-12896123)
chr2 (571-625)||(27351536-27351590)
chr2 (571-625)||(30556866-30556920)
chr2 (571-625)||(44543389-44543443)
chr2 (112-177)||(7174359-7174424)
chr2 (571-624)||(17370675-17370728)
chr2 (571-626)||(12898642-12898697)
chr2 (126-176)||(33020314-33020364)
chr2 (571-627)||(29550737-29550793)
[»] chr6 (15 HSPs)
chr6 (571-625)||(1394367-1394421)
chr6 (571-625)||(17203579-17203633)
chr6 (571-625)||(17905505-17905559)
chr6 (571-625)||(4099582-4099636)
chr6 (575-625)||(34294612-34294662)
chr6 (112-165)||(19119075-19119128)
chr6 (112-165)||(19126369-19126422)
chr6 (577-625)||(25068605-25068653)
chr6 (571-625)||(4810708-4810762)
chr6 (571-625)||(9829327-9829381)
chr6 (571-625)||(29202801-29202855)
chr6 (322-374)||(4183768-4183820)
chr6 (126-176)||(24417486-24417536)
chr6 (116-172)||(1442098-1442154)
chr6 (571-599)||(2969681-2969709)
[»] scaffold0090 (1 HSPs)
scaffold0090 (575-627)||(11997-12049)
[»] scaffold0044 (1 HSPs)
scaffold0044 (112-167)||(89153-89208)
[»] scaffold0294 (1 HSPs)
scaffold0294 (575-625)||(12158-12208)
[»] scaffold0018 (1 HSPs)
scaffold0018 (571-625)||(163413-163467)
[»] scaffold0059 (1 HSPs)
scaffold0059 (571-625)||(70609-70663)
[»] scaffold0013 (1 HSPs)
scaffold0013 (571-625)||(104985-105039)
[»] scaffold0167 (1 HSPs)
scaffold0167 (577-625)||(16594-16642)


Alignment Details
Target: chr3 (Bit Score: 137; Significance: 3e-71; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 365 - 517
Target Start/End: Complemental strand, 3756075 - 3755923
Alignment:
Q  365 ggagtttcaccggcaacctacacagaatttctagaatgacatcgaaaggaagagtgggaagcggctactcatgaagtaaatcactgctgaaagagggtga 464  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  3756075 ggagtttcaccggcagcctacacagaatttctagaatgacatcgaaaggaagagtgggaagcggcgactcatgaagtaaatcgctgctgaaagagggtga 3755976  T
Q  465 aggtggtacaaccgaaagctggttgttgattgaagtgttttcctctgtcatag 517  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3755975 aggtggtacaaccgaaagctggttgttgatggaagtgttttcctctgtcatag 3755923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 46 - 273
Target Start/End: Complemental strand, 3746139 - 3745912
Alignment:
Q  46 cacttgatcatcctaaaaaatatatactgccttggcacgtacatgagaagtagtaagttcccgctcgtaaggaacagtaaacaatttagtccaagactct 145  Q
    ||||||| |||||| ||| ||||||||||| ||||| |||||||||||| ||||  ||||  ||| |||||||| ||| |||||||||||||||||||||    
T  3746139 cacttgaccatcctcaaagatatatactgctttggcgcgtacatgagaattagttggttctggcttgtaaggaatagtcaacaatttagtccaagactct 3746040  T
Q  146 tggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaaacacccaaagctgataagtcacacacatctaccc 245  Q
    || ||| ||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||||  || |||||||||||||||| ||    
T  3746039 tgctttgcatattccttcataatccaaatatcatcaccagaagtcacgcacaagcaatcccttaaaacacccaaagacgacaagtcacacacatctatcc 3745940  T
Q  246 ctccaaaattagggggtaaaatattttg 273  Q
    |||||| | |||| ||| |||| |||||    
T  3745939 ctccaatactaggaggtgaaatcttttg 3745912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 114 - 273
Target Start/End: Complemental strand, 3754663 - 3754504
Alignment:
Q  114 aaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaaac 213  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||  |||||||||||||||||||||||||||||||||    
T  3754663 aaggaatagtaaacaatttagtccaagactctttatttccatattccttcataacccaaacatcaacaccagaagtcacgcacaagcaatccctcaaaac 3754564  T
Q  214 acccaaagctgataagtcacacacatctacccctccaaaattagggggtaaaatattttg 273  Q
    || |||||| || | |||||||||||| |||||||| |||||||| ||| |||| |||||    
T  3754563 actcaaagccgacatgtcacacacatccacccctcccaaattaggaggtgaaatcttttg 3754504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 125 - 273
Target Start/End: Original strand, 4157943 - 4158094
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagt---cacgcacaagcaatccctcaaaacacccaaag 221  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  4157943 aacaatttagtccaagactctttatttccatattccttcataagccaaacatcataaccagaagtggtcacgcacaagcaatccctcaaaacacccaaag 4158042  T
Q  222 ctgataagtcacacacatctacccctccaaaattagggggtaaaatattttg 273  Q
    | || |||||||||||||| |||||||| |||||||| ||| |||| |||||    
T  4158043 ccgacaagtcacacacatccacccctcccaaattaggaggtgaaatcttttg 4158094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 112 - 273
Target Start/End: Original strand, 4142120 - 4142284
Alignment:
Q  112 gtaaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaa---gtcacgcacaagcaatccctc 208  Q
    |||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||| ||||||   |||||||||||||||||||||    
T  4142120 gtaaggaatagtgaacaatttagtccaagactctttatttccatattccttcataagccaaacatcatagccagaagtcgtcacgcacaagcaatccctc 4142219  T
Q  209 aaaacacccaaagctgataagtcacacacatctacccctccaaaattagggggtaaaatattttg 273  Q
    |||||||||||| | || |||||||  ||||| |||||||| |||||||| ||| |||| |||||    
T  4142220 aaaacacccaaaaccgacaagtcaccaacatccacccctcccaaattaggaggtgaaatcttttg 4142284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 107 - 219
Target Start/End: Original strand, 2678380 - 2678492
Alignment:
Q  107 cgctcgtaaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccc 206  Q
    ||||||||||||| ||| |||||||||||||| |||||||  ||||||||||  ||||||| ||| ||||||| |||| |||||| |||||||||||||     
T  2678380 cgctcgtaaggaatagtgaacaatttagtccatgactctttttttccatattgtttcataacccaaacatcatcaccacaagtcaagcacaagcaatcct 2678479  T
Q  207 tcaaaacacccaa 219  Q
    |||||||||||||    
T  2678480 tcaaaacacccaa 2678492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 803211 - 803312
Alignment:
Q  119 acagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaaacaccca 218  Q
    ||||| ||||| ||||||||||||||||  ||||||||||| ||||||| ||| ||||||| ||||||| ||| |||||||||||||||||| | |||||    
T  803211 acagtgaacaacttagtccaagactctttatttccatattctttcataacccaaacatcatcaccagaaatcatgcacaagcaatccctcaacataccca 803310  T
Q  219 aa 220  Q
    ||    
T  803311 aa 803312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 112 - 219
Target Start/End: Complemental strand, 2459340 - 2459233
Alignment:
Q  112 gtaaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaa 211  Q
    ||||| ||| ||||||||||| |||||||||||||  ||||||||||||||||||||||| ||| ||| ||||||| | | | |||||||||| |||||     
T  2459340 gtaagaaacggtaaacaattttgtccaagactctttatttccatattccttcataatccaaacaacatgaccagaaattatggacaagcaatcactcaat 2459241  T
Q  212 acacccaa 219  Q
    ||||||||    
T  2459240 acacccaa 2459233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 119 - 221
Target Start/End: Original strand, 2696725 - 2696827
Alignment:
Q  119 acagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaaacaccca 218  Q
    ||||| ||||||||| ||||||||||||  ||||||||||||||||||||||| ||||||| | | ||| ||| || |||||||||||| || |||||||    
T  2696725 acagtgaacaatttaatccaagactctttatttccatattccttcataatccaaacatcatgatcggaaatcaagcccaagcaatcccttaacacaccca 2696824  T
Q  219 aag 221  Q
    |||    
T  2696825 aag 2696827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 325 - 430
Target Start/End: Original strand, 2679196 - 2679301
Alignment:
Q  325 agagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaatgacatcgaaaggaagagtgggaa 424  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||| ||||||| | |||||| |||| || ||| | ||||  |||||||||||||||||||    
T  2679196 agagatttccatgacttgcagacacatcggagttgaaggaggaatttcacctgtaacctagacagtatatctgggatgaggtcgaaaggaagagtgggaa 2679295  T
Q  425 gcggct 430  Q
    | ||||    
T  2679296 gtggct 2679301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 325 - 430
Target Start/End: Original strand, 2687103 - 2687208
Alignment:
Q  325 agagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaatgacatcgaaaggaagagtgggaa 424  Q
    ||||| ||||| ||||||||||||||| ||||||||||||||| ||||||| |||||||| |||| || ||| | ||||  ||||||||||| |||||||    
T  2687103 agagatttccatgacttgcagacacatcggagttgaaggaggaatttcacctgcaacctagacagtatatctgggatgaggtcgaaaggaagggtgggaa 2687202  T
Q  425 gcggct 430  Q
    | ||||    
T  2687203 ggggct 2687208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 113 - 219
Target Start/End: Original strand, 2686299 - 2686408
Alignment:
Q  113 taaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataat---ccatacatcataaccagaagtcacgcacaagcaatccctca 209  Q
    ||||||| ||| ||||||||| ||||||||||||  ||||||||||||||||||||   ||| ||||||| |||| |  ||| |||||| ||||||||||    
T  2686299 taaggaatagtgaacaatttattccaagactctttttttccatattccttcataataacccaaacatcatcaccacagatcaagcacaaacaatccctca 2686398  T
Q  210 aaacacccaa 219  Q
    ||||||||||    
T  2686399 aaacacccaa 2686408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 956433 - 956343
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaaacac 215  Q
    |||||||||  |||||||||||  ||||||||||||||||||||||| |||||  ||||| || ||| ||||||||||||||| |||||||    
T  956433 aacaatttatgccaagactctttttttccatattccttcataatccaaacatcgcaaccaaaaatcatgcacaagcaatccctgaaaacac 956343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 1891050 - 1891156
Alignment:
Q  112 gtaaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaa 211  Q
    ||||| |||| || |||||||||||||||| ||||  ||||||| ||||||||||||||| ||||||| |||| ||  || |||||| |||||||||||     
T  1891050 gtaagaaacactatacaatttagtccaagagtctttatttccatgttccttcataatccaaacatcatgaccaaaaaccaggcacaaacaatccctcaac 1891149  T
Q  212 acaccca 218  Q
    |||||||    
T  1891150 acaccca 1891156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 322 - 422
Target Start/End: Original strand, 2651167 - 2651267
Alignment:
Q  322 ataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaatgacatcgaaaggaagagtgg 421  Q
    |||||||||||||| | ||||||||||||| | ||||||| |||||| || ||||| |||||||  ||||||||| |||| |  ||||||||||||||||    
T  2651167 ataagagaattccatggcttgcagacacatcgaagttgaaagaggagctttaccggtaacctacgtagaatttcttgaataaggtcgaaaggaagagtgg 2651266  T
Q  422 g 422  Q
    |    
T  2651267 g 2651267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 627
Target Start/End: Complemental strand, 38886917 - 38886861
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  38886917 ttaccaattatatattgcattttattatttatatgtcaatccctttgcaataaactc 38886861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 627
Target Start/End: Complemental strand, 53046994 - 53046938
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  53046994 ttaccaattatatattgcattttattattcgtatgtcaattcatttacaataaactc 53046938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 2631408 - 2631358
Alignment:
Q  126 acaatttagtccaagactcttggtttccatattccttcataatccatacat 176  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  2631408 acaatttagtccaagactcttgatttccatattccttcataatccaaacat 2631358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 421
Target Start/End: Complemental strand, 3745292 - 3745166
Alignment:
Q  295 tgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaattt 394  Q
    ||||||||| | || ||||| ||||| || ||||||||||| |||||||| |||||| ||| |||||||| ||  |||||||| | |||||| |  ||||    
T  3745292 tgctttttgacaaatttgggatcagatattagagaattccatgacttgcaaacacatcggaattgaaggatgaacttcaccggtagcctacataagattt 3745193  T
Q  395 ctagaatgacatcgaaaggaagagtgg 421  Q
    || ||||||| ||| ||||||||||||    
T  3745192 ctggaatgacgtcggaaggaagagtgg 3745166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 47501238 - 47501184
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  47501238 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaac 47501184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 325 - 425
Target Start/End: Complemental strand, 967963 - 967863
Alignment:
Q  325 agagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaatgacatcgaaaggaagagtgggaa 424  Q
    ||||||||||| |||||||| |||||| ||| ||| | |||||| || ||||  | |||||| ||||||||| |||||| ||||||||||||||| ||||    
T  967963 agagaattccacgacttgcacacacatcggaattgcatgaggagctttaccgatagcctacatagaatttctggaatgagatcgaaaggaagagtcggaa 967864  T
Q  425 g 425  Q
    |    
T  967863 g 967863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 325 - 425
Target Start/End: Original strand, 1891807 - 1891907
Alignment:
Q  325 agagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaatgacatcgaaaggaagagtgggaa 424  Q
    ||||||||||| |||||||||||| || |||||||||||||||| ||||| || |  |||   |||||||||  ||||| ||| ||||||||||||||||    
T  1891807 agagaattccatgacttgcagacagatcggagttgaaggaggagcttcactggaagtctagttagaatttctgaaatgagatccaaaggaagagtgggaa 1891906  T
Q  425 g 425  Q
    |    
T  1891907 g 1891907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 2644362 - 2644413
Alignment:
Q  126 acaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  2644362 acaatttagtccaagactcttgatttccatactccttcataatccaaacatc 2644413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 2659152 - 2659203
Alignment:
Q  126 acaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  2659152 acaatttagtccaagactcttgatttccatactccttcataatccaaacatc 2659203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 860689 - 860743
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  |||||||||  |||||||||||||    
T  860689 ttaccaattatatattgcattttattattcgtatgtcaatctctttacaataaac 860743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 10267381 - 10267435
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||| ||||||||||||  ||||||||| ||||||||||||||    
T  10267381 ttaccaattatatattacattttattattcgtatgtcaatccctttacaataaac 10267435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 23777254 - 23777308
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| ||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  23777254 ttacctattatatattgcattttattattcatatgtcaatctctttacaataaac 23777308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 37757721 - 37757783
Alignment:
Q  111 cgtaaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccata 173  Q
    ||||||||||| |  |||| || ||||||||||||| ||||||||||||||||||||||||||    
T  37757721 cgtaaggaacactgtacaacttcgtccaagactctttgtttccatattccttcataatccata 37757783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 37760888 - 37760942
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  37760888 ttacctattatatattgcattttattattcgtatgtcaatccctttacaataaac 37760942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 625
Target Start/End: Original strand, 51654745 - 51654795
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  51654745 caattatatattgcattttattatttgtatgtcaatccctttacaataaac 51654795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 2492144 - 2492083
Alignment:
Q  115 aggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacat 176  Q
    ||||||| || |||||||||||||||||||| | |||||||| |||||||||||||| ||||    
T  2492144 aggaacactatacaatttagtccaagactctcgatttccatactccttcataatccaaacat 2492083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 13498273 - 13498224
Alignment:
Q  128 aatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  13498273 aatttagtccaagactctttatttccatattccttcataatccaaacatc 13498224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 624
Target Start/End: Complemental strand, 20876572 - 20876519
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||||||  ||||||||| | |||||||||||    
T  20876572 ttaccaattatatattgcattttattattcgtatgtcaatccttttacaataaa 20876519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 627
Target Start/End: Complemental strand, 836899 - 836843
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||| |||||||||||||||||||||||  |||||||||  |||||||||||||||    
T  836899 ttacctattatatattgcattttattatttgtatgtcaatcactttacaataaactc 836843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 425
Target Start/End: Complemental strand, 955665 - 955541
Alignment:
Q  301 ttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaa 400  Q
    |||||||||||||  ||||| |||||||||||||| ||||| || || ||| | |||||||||||||| || ||| | | |||||| || ||||||  ||    
T  955665 ttggcgaagttggaatcagagataagagaattccaagacttacaaacgcatcgaagttgaaggaggagctttacctgtagcctacagaggatttctgaaa 955566  T
Q  401 tgacatcgaaaggaagagtgggaag 425  Q
     || ||| ||||||||| |||||||    
T  955565 cgagatcaaaaggaagaatgggaag 955541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 419
Target Start/End: Original strand, 4158675 - 4158799
Alignment:
Q  295 tgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaattt 394  Q
    ||||| ||| |||| ||||| ||||| || ||||||||||| |||||||| |||||||||| | | |||| ||  || ||||| | |||||| |  ||||    
T  4158675 tgcttcttgacgaatttgggatcagatattagagaattccatgacttgcaaacacattggaatcggaggatgaactttaccggtagcctacatatgattt 4158774  T
Q  395 ctagaatgacatcgaaaggaagagt 419  Q
    |||||||||| ||| ||||||||||    
T  4158775 ctagaatgacgtcggaaggaagagt 4158799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 337 - 425
Target Start/End: Original strand, 9497236 - 9497324
Alignment:
Q  337 gacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaatgacatcgaaaggaagagtgggaag 425  Q
    |||||||||||||||  ||||| || ||||||||||||||| |||||||| || |||| | | ||||  |||||||||| |||||||||    
T  9497236 gacttgcagacacatctgagttcaaagaggagtttcaccggtaacctacaaagtatttatggtatgaggtcgaaaggaatagtgggaag 9497324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 754609 - 754660
Alignment:
Q  126 acaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||||||||||||||| | |||||| |||||||||||||| |||||    
T  754609 acaatttagtccaagactcttgatctccatactccttcataatccaaacatc 754660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 968720 - 968629
Alignment:
Q  128 aatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaaacacccaa 219  Q
    ||||||||||| |||||||  ||||||| ||||||||||| ||| ||||||| |||   | ||| |||||| ||||||||||| ||||||||    
T  968720 aatttagtccatgactctttatttccatgttccttcataacccaaacatcatgaccgataatcatgcacaaacaatccctcaacacacccaa 968629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 37753345 - 37753396
Alignment:
Q  126 acaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||| |||||    
T  37753345 acaatttagtccaagactctttctttccatattcctccataatccaaacatc 37753396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 43992023 - 43991960
Alignment:
Q  114 aaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||| || ||||||| ||||||||||||   ||||||||||||||||||||||| |||||    
T  43992023 aaggaacactatacaatttggtccaagactctatatttccatattccttcataatccaaacatc 43991960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 989461 - 989359
Alignment:
Q  112 gtaaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaa 211  Q
    ||||| || ||| ||||||||||||||||||||||  ||||| || || ||||| | ||| ||||||| |||||||   | |||||||||||| ||||||    
T  989461 gtaagaaatagtgaacaatttagtccaagactctttatttccgtactctttcattacccaaacatcatcaccagaaaaaatgcacaagcaatctctcaaa 989362  T
Q  212 aca 214  Q
    |||    
T  989361 aca 989359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 1007513 - 1007423
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaaacac 215  Q
    |||||||||||||| ||||| |  ||||||||||||||||| | ||| ||||||| |||| ||  ||||  |||||||||||| |||||||    
T  1007513 aacaatttagtccaggactcgttatttccatattccttcattacccaaacatcatcaccacaaaacacggtcaagcaatccctaaaaacac 1007423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 215
Target Start/End: Complemental strand, 1022541 - 1022451
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaaacac 215  Q
    |||||||||||||| ||||| |  ||||||||||||||||| | ||| ||||||| |||| ||  ||||  |||||||||||| |||||||    
T  1022541 aacaatttagtccatgactcgttatttccatattccttcattacccaaacatcatcaccacaaaacacggtcaagcaatccctaaaaacac 1022451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 1936979 - 1937073
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaaacacccaa 219  Q
    |||||||||| ||| || ||||  |||  |||||||||||||| ||| |||||||||||| ||  || |||||| ||||||||||| ||||||||    
T  1936979 aacaatttagaccaggattctttatttttatattccttcataacccaaacatcataaccaaaaaccatgcacaaacaatccctcaacacacccaa 1937073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 7324420 - 7324482
Alignment:
Q  115 aggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    ||||||| || |||||||||||||||||||||  ||||| || |||||||||||||| |||||    
T  7324420 aggaacactatacaatttagtccaagactctttatttccgtagtccttcataatccaaacatc 7324482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 207
Target Start/End: Original strand, 7432053 - 7432135
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccct 207  Q
    |||||||||||||| || ||||  |||||||||||||||||| |||| ||||||| ||||| |   | |||||||||||||||    
T  7432053 aacaatttagtccacgattctttatttccatattccttcatactccaaacatcatgaccagcaaggatgcacaagcaatccct 7432135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 25916774 - 25916720
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||| || |||||||||| | || |||||||||    
T  25916774 ttaccaattatatattgcattttatttttcatatgtcaatcctttaacaataaac 25916720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 783785 - 783850
Alignment:
Q  112 gtaaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    ||||||||||||| ||||||||||||| | || |   ||||||||||||||||||||||| |||||    
T  783785 gtaaggaacagtatacaatttagtccatggctttgtatttccatattccttcataatccaaacatc 783850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 325 - 422
Target Start/End: Original strand, 7432842 - 7432939
Alignment:
Q  325 agagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaatgacatcgaaaggaagagtggg 422  Q
    ||||||||||| ||||||||||  ||| | | ||||||||| || |||||||| | |||| | || ||||||  ||||| ||||||||||||||||||    
T  7432842 agagaattccacgacttgcagatgcatcgcaattgaaggagaagcttcaccggaagcctagagagtatttctgtaatgagatcgaaaggaagagtggg 7432939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 7442966 - 7443027
Alignment:
Q  115 aggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacat 176  Q
    ||||||| || |||| ||||||||||||||||| |||||||| |||||||| ||||| ||||    
T  7442966 aggaacactatacaacttagtccaagactcttgatttccatactccttcatgatccaaacat 7443027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 9561987 - 9562036
Alignment:
Q  128 aatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||||||||||||| |||||||| || ||||||||||| |||||    
T  9561987 aatttagtccaagactcttgatttccatactcattcataatccaaacatc 9562036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 572 - 621
Target Start/End: Original strand, 11523319 - 11523368
Alignment:
Q  572 taccaattatatattgcattttattattgatatgtcaattcctttacaat 621  Q
    ||||||||||||||||||||||||||||  ||| ||||| ||||||||||    
T  11523319 taccaattatatattgcattttattattcgtatatcaatccctttacaat 11523368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 319 - 396
Target Start/End: Complemental strand, 44000896 - 44000819
Alignment:
Q  319 gaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttct 396  Q
    ||||| ||||| ||||||||||||||||  ||| ||||||| ||||| |  |||||||| |||||||||| |||||||    
T  44000896 gaaattagagatttccaggacttgcagatgcatcggagttgcaggagtatcttcaccggtaacctacacaaaatttct 44000819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 374
Target Start/End: Original strand, 1898388 - 1898460
Alignment:
Q  302 tggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcac 374  Q
    ||||||| ||||| || || |||||| ||||||| |||||| ||||| ||| ||||||||||||| |||||||    
T  1898388 tggcgaatttgggatcggagataagataattccatgacttggagacagatttgagttgaaggaggtgtttcac 1898460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 374
Target Start/End: Original strand, 1907834 - 1907906
Alignment:
Q  302 tggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcac 374  Q
    ||||||| ||||| || || |||||| ||||||| |||||| ||||| ||| ||||||||||||| |||||||    
T  1907834 tggcgaatttgggatcggagataagataattccatgacttggagacagatttgagttgaaggaggtgtttcac 1907906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 2442091 - 2442039
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    ||||||||||||||||| ||||  |||||||| |||||||||||||| |||||    
T  2442091 aacaatttagtccaagaatctttatttccatactccttcataatccaaacatc 2442039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 374
Target Start/End: Complemental strand, 2931249 - 2931177
Alignment:
Q  302 tggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcac 374  Q
    ||||||| ||||| || || |||||| ||||||| |||||| ||||| ||| ||||||||||||| |||||||    
T  2931249 tggcgaatttgggatcggagataagataattccatgacttggagacagatttgagttgaaggaggtgtttcac 2931177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 624
Target Start/End: Original strand, 11454797 - 11454841
Alignment:
Q  580 atatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||    
T  11454797 atatattgcattttattattcgtatgtcaatccctttacaataaa 11454841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 422
Target Start/End: Complemental strand, 13478916 - 13478816
Alignment:
Q  322 ataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaatgacatcgaaaggaagagtgg 421  Q
    |||| |||||||||  |||| | ||||||| | |||||||||||||| ||||| || | |||||| |||||||||| |||||  |||| ||||||| |||    
T  13478916 ataaaagaattccacaacttactgacacatcgaagttgaaggaggagcttcacgggtagcctacatagaatttctataatgaggtcgagaggaagaatgg 13478817  T
Q  422 g 422  Q
    |    
T  13478816 g 13478816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 23234853 - 23234905
Alignment:
Q  113 taaggaacagtaaacaatttagtccaagactcttggtttccatattccttcat 165  Q
    |||||||||  ||||||||||||||||||||||  |||||||||||| |||||    
T  23234853 taaggaacacgaaacaatttagtccaagactctacgtttccatattctttcat 23234905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 571 - 627
Target Start/End: Complemental strand, 36642821 - 36642765
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||| ||||||||||||||||||||||   ||||||||| ||||||||| ||||||    
T  36642821 ttacctattatatattgcattttattatccgtatgtcaatccctttacaacaaactc 36642765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 165
Target Start/End: Original strand, 746383 - 746422
Alignment:
Q  126 acaatttagtccaagactcttggtttccatattccttcat 165  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  746383 acaatttagtccaagactcttgatttccatactccttcat 746422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 1940578 - 1940637
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatccatacatcataacca 184  Q
    |||||||||||||| || ||||| ||||||| ||||||||||| ||| ||||||| ||||    
T  1940578 aacaatttagtccacgagtcttgatttccatgttccttcataacccaaacatcatgacca 1940637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 2442189 - 2442134
Alignment:
Q  27 cccctgtgaacttcaacaacacttgatcatcctaaaaaatatatactgccttggca 82  Q
    ||||||| ||||||||||||||||||||||||| ||| | |||||| | |||||||    
T  2442189 cccctgtcaacttcaacaacacttgatcatcctcaaataaatataccggcttggca 2442134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 2456300 - 2456249
Alignment:
Q  126 acaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||||||||| ||||  ||||||||||||||||||| ||| |||||    
T  2456300 acaatttagtccaagagtctttatttccatattccttcataacccaaacatc 2456249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 9565829 - 9565880
Alignment:
Q  126 acaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||| |||||    
T  9565829 acaatttagtccaagactcttgatctccgtactccttcataatccaaacatc 9565880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 425
Target Start/End: Original strand, 803952 - 804082
Alignment:
Q  295 tgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaattt 394  Q
    ||||||||||| |||||||  ||  | || ||||||||||| |||||||| || ||| |||||||||| | ||  ||||| || |||| ||||| |||||    
T  803952 tgctttttggcaaagttggcatcgcatattagagaattccatgacttgcaaacgcatcggagttgaagtaagaacttcacaggtaaccaacacaaaattt 804051  T
Q  395 ctagaatgacatcgaaaggaagagtgggaag 425  Q
    ||  ||||| ||| | |||||| ||||||||    
T  804052 ctgcaatgagatctagaggaagggtgggaag 804082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 2476696 - 2476634
Alignment:
Q  115 aggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||  |||||||||||||||||||||  |||||||| |  ||||||||||| |||||    
T  2476696 aggaacagtgtacaatttagtccaagactctttatttccatagtgtttcataatccaaacatc 2476634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 24365958 - 24366012
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| || ||||||||||||||||||||  |||||||||  |||||||||||||    
T  24365958 ttacctatcatatattgcattttattattcgtatgtcaatctctttacaataaac 24366012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 322 - 396
Target Start/End: Complemental strand, 43991335 - 43991261
Alignment:
Q  322 ataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttct 396  Q
    |||||||| ||||||||||||||||  ||||||||||| | ||| |  |||||||| || |||||||| ||||||    
T  43991335 ataagagatttccaggacttgcagatgcattggagttgcatgagtatcttcaccggtaatctacacaggatttct 43991261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 46452587 - 46452641
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||| ||||| |||||| |||||||    
T  46452587 ttaccgattatatattgcattttattattcgtatatcaatccctttaaaataaac 46452641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 997623 - 997566
Alignment:
Q  130 tttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaa 187  Q
    |||||||||||||||||  ||||||||||||||||| | ||| ||| ||| |||||||    
T  997623 tttagtccaagactctttatttccatattccttcattacccaaacaacatcaccagaa 997566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 1014013 - 1013956
Alignment:
Q  130 tttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaa 187  Q
    |||||||||||||||||  ||||||||||||||||| | ||| ||| ||| |||||||    
T  1014013 tttagtccaagactctttatttccatattccttcattacccaaacaacatcaccagaa 1013956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 425
Target Start/End: Original strand, 1937714 - 1937823
Alignment:
Q  316 tcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaatgacatcgaaaggaa 415  Q
    |||||||| ||||||||| | |||||||| || ||  ||| |   ||||||||||||||||  | |||| | || |||||| |||||| ||| |||||||    
T  1937714 tcagaaattagagaattctatgacttgcaaacgcaccggaatctcaggaggagtttcaccgatagcctagagaggatttctggaatgagatcaaaaggaa 1937813  T
Q  416 gagtgggaag 425  Q
    ||||||||||    
T  1937814 gagtgggaag 1937823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 3756099 - 3756070
Alignment:
Q  329 aattccaggacttgcagacacattggagtt 358  Q
    ||||||||||||||||||||||||||||||    
T  3756099 aattccaggacttgcagacacattggagtt 3756070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 177
Target Start/End: Complemental strand, 7942550 - 7942485
Alignment:
Q  112 gtaaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||| |  |||||||| ||||||||||||  || ||||| |||||||||||||| |||||    
T  7942550 gtaaggaacattgtacaatttaatccaagactctttattaccatactccttcataatccaaacatc 7942485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 9587185 - 9587230
Alignment:
Q  126 acaatttagtccaagactcttggtttccatattccttcataatcca 171  Q
    ||||||| ||||||| |||||  |||||||||||||||||||||||    
T  9587185 acaattttgtccaaggctctttatttccatattccttcataatcca 9587230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 23197065 - 23197024
Alignment:
Q  124 aaacaatttagtccaagactcttggtttccatattccttcat 165  Q
    |||||||||||||||||| ||||  |||||||||||||||||    
T  23197065 aaacaatttagtccaagattcttcatttccatattccttcat 23197024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 294 - 374
Target Start/End: Complemental strand, 988738 - 988658
Alignment:
Q  294 gtgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcac 374  Q
    ||||||||| ||||| ||||| ||||| || | ||||||||| ||||||||    ||| |||||||||||||||| |||||    
T  988738 gtgcttttttgcgaatttgggatcagagattaaagaattccatgacttgcaagagcatcggagttgaaggaggagcttcac 988658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 1931968 - 1932012
Alignment:
Q  381 cctacacagaatttctagaatgacatcgaaaggaagagtgggaag 425  Q
    |||||| || |||||| |||||| |||||||||||||||||||||    
T  1931968 cctacagaggatttctggaatgagatcgaaaggaagagtgggaag 1932012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 2702471 - 2702527
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||||||||||||||| |||||||||||  ||||  ||| ||||||| ||||||||    
T  2702471 ttaccaattatatattgtattttattattcgtatggtaatccctttaccataaactc 2702527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 419
Target Start/End: Original strand, 4142865 - 4142989
Alignment:
Q  295 tgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaattt 394  Q
    ||||| ||| |||| ||||| ||||| || ||||||||||| |||||||| |||||| ||| | |||||| ||  || || || | |||||| |  ||||    
T  4142865 tgcttcttgacgaatttgggatcagatattagagaattccatgacttgcaaacacatcggaatcgaaggatgaactttactggtagcctacatatgattt 4142964  T
Q  395 ctagaatgacatcgaaaggaagagt 419  Q
    || ||||||| ||| ||||||||||    
T  4142965 ctggaatgacgtcggaaggaagagt 4142989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 8e-35; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 35 - 273
Target Start/End: Complemental strand, 11081955 - 11081714
Alignment:
Q  35 aacttcaacaacacttgatcatcctaaaaaatatatactgccttggcacgtacatgagaagtagtaagttcccgctcgtaaggaacagtaaacaatttag 134  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||| |   |||| |    ||| | | || | |  |||||||| ||||||||||||||    
T  11081955 aacttcaacaacacttgatcatcctcaaatatatatactgccttgggaaagacatcacgtttagaaggatctctcatgtaaggaatagtaaacaatttag 11081856  T
Q  135 tccaagactcttggtttccatattccttcataatccatacatcataaccagaa---gtcacgcacaagcaatccctcaaaacacccaaagctgataagtc 231  Q
    ||||||||||||  |||||||| |||||||||| ||| ||||||| || || |   ||||| ||||||||||||||||||||||||||||| || ||||     
T  11081855 tccaagactctttatttccatactccttcataacccaaacatcatcactagtagtcgtcacacacaagcaatccctcaaaacacccaaagccgacaagtt 11081756  T
Q  232 acacacatctacccctccaaaattagggggtaaaatattttg 273  Q
    || |||||| |||||| | |||||||| ||| |||| |||||    
T  11081755 acgcacatccaccccttccaaattaggaggtgaaatcttttg 11081714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 289 - 425
Target Start/End: Original strand, 23764979 - 23765115
Alignment:
Q  289 cgaaagtgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacaca 388  Q
    ||||||||||| |||||||| ||||| |||||||| |||||||||||  ||||||| |||||| | | ||| | |||| ||||||| || | |||| | |    
T  23764979 cgaaagtgcttcttggcgaatttgggatcagaaattagagaattccaccacttgcacacacatcgaaattgcatgaggggtttcacagggagcctataga 23765078  T
Q  389 gaatttctagaatgacatcgaaaggaagagtgggaag 425  Q
    |||||||| |||||| ||||||||||| |||||||||    
T  23765079 gaatttctggaatgagatcgaaaggaatagtgggaag 23765115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 289 - 425
Target Start/End: Original strand, 23814827 - 23814963
Alignment:
Q  289 cgaaagtgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacaca 388  Q
    ||||||||||| |||||||| ||||| |||||||| |||||||||||  ||||||| |||||| | | ||| | |||| ||||||| || | |||| | |    
T  23814827 cgaaagtgcttcttggcgaatttgggatcagaaattagagaattccaccacttgcacacacatcgaaattgcatgaggggtttcacagggagcctataga 23814926  T
Q  389 gaatttctagaatgacatcgaaaggaagagtgggaag 425  Q
    |||||||| |||||| ||||||||||| |||||||||    
T  23814927 gaatttctggaatgagatcgaaaggaatagtgggaag 23814963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 290 - 425
Target Start/End: Original strand, 23774793 - 23774928
Alignment:
Q  290 gaaagtgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacag 389  Q
    |||||||||| |||||||| ||||| |||||||| |||||||||||  ||||||| |||||| | | ||| | |||| ||||||| || | ||||   ||    
T  23774793 gaaagtgcttcttggcgaacttgggatcagaaattagagaattccaccacttgcacacacatcgaaattgcatgaggggtttcacggggagcctatggag 23774892  T
Q  390 aatttctagaatgacatcgaaaggaagagtgggaag 425  Q
    ||||||| |||||| ||||||||||| |||||||||    
T  23774893 aatttctggaatgagatcgaaaggaatagtgggaag 23774928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 290 - 425
Target Start/End: Original strand, 23861746 - 23861881
Alignment:
Q  290 gaaagtgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacag 389  Q
    |||||||||| |||||||| ||||| |||||||| |||||||||||  ||||||| |||||| | | ||| | |||| ||||||| || | ||||   ||    
T  23861746 gaaagtgcttcttggcgaacttgggatcagaaattagagaattccaccacttgcacacacatcgaaattgcatgaggggtttcacggggagcctatggag 23861845  T
Q  390 aatttctagaatgacatcgaaaggaagagtgggaag 425  Q
    ||||||| |||||| ||||||||||| |||||||||    
T  23861846 aatttctggaatgagatcgaaaggaatagtgggaag 23861881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 289 - 425
Target Start/End: Original strand, 23754758 - 23754894
Alignment:
Q  289 cgaaagtgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacaca 388  Q
    ||||||||||| |||||||| ||||| |||||||| |||||||||||  ||||||| |||||| | | ||| | |||  ||||||| || | ||||   |    
T  23754758 cgaaagtgcttcttggcgaacttgggatcagaaattagagaattccaccacttgcacacacatcgaaattgcatgagaggtttcacggggagcctatgga 23754857  T
Q  389 gaatttctagaatgacatcgaaaggaagagtgggaag 425  Q
    |||||||| |||||| ||||||||||| |||||||||    
T  23754858 gaatttctggaatgagatcgaaaggaatagtgggaag 23754894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 289 - 425
Target Start/End: Original strand, 23820213 - 23820349
Alignment:
Q  289 cgaaagtgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacaca 388  Q
    ||||||||||| |||||||| ||||| |||||||| |||||||||||  ||||||| |||||| | | ||| | |||  ||||||| || | ||||   |    
T  23820213 cgaaagtgcttcttggcgaacttgggatcagaaattagagaattccaccacttgcacacacatcgaaattgcatgagaggtttcacggggagcctatgga 23820312  T
Q  389 gaatttctagaatgacatcgaaaggaagagtgggaag 425  Q
    |||||||| |||||| ||||||||||| |||||||||    
T  23820313 gaatttctggaatgagatcgaaaggaatagtgggaag 23820349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 14164286 - 14164232
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||||||||||||||||||||||||||| |||||||||| | ||||||||||||    
T  14164286 ttaccaattatatattgcattttattattcatatgtcaatccttttacaataaac 14164232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 23766861 - 23766923
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaa 187  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| |||||||    
T  23766861 aacaatttagtccaagactctttatttccatattctttcataatccaaacatcattaccagaa 23766923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 23816709 - 23816771
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaa 187  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||| |||||||    
T  23816709 aacaatttagtccaagactctttatttccatattctttcataatccaaacatcattaccagaa 23816771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 41511688 - 41511742
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  41511688 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaac 41511742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 575 - 624
Target Start/End: Complemental strand, 9487408 - 9487359
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9487408 caattatatattgcattttattatttgtatgtcaattcctttacaataaa 9487359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 305 - 421
Target Start/End: Complemental strand, 11081493 - 11081377
Alignment:
Q  305 cgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaatgac 404  Q
    |||| ||||| ||||| || | |||||| || |||||||| |||||||||| | |||||| ||  || ||||| |||||||| || |||||||||||||     
T  11081493 cgaatttgggatcagatattaaagaatttcacgacttgcaaacacattggaatcgaaggatgaacttaaccggtaacctacataggatttctagaatgag 11081394  T
Q  405 atcgaaaggaagagtgg 421  Q
    |||| ||||||||||||    
T  11081393 atcggaaggaagagtgg 11081377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 575 - 627
Target Start/End: Original strand, 19322778 - 19322830
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  19322778 caattatatattgcattttattatccgtatgtcaattcctttacaataaactc 19322830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 20563310 - 20563366
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||||||||||   |||||||| ||||||||||||||||    
T  20563310 ttaccaattatatattgcattttattattcgcatgtcaatccctttacaataaactc 20563366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 7129209 - 7129263
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  7129209 ttactaattatatattgcattttattattcgtatgtcaatccctttacaataaac 7129263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 38110591 - 38110645
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||||| |||||||||||||||||||||  ||||||||| ||||||||||||||    
T  38110591 ttaccaaatatatattgcattttattatttgtatgtcaatccctttacaataaac 38110645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 43394647 - 43394593
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  43394647 ttacctattatatattgcattttattattcgtatgtcaatccctttacaataaac 43394593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 19123506 - 19123559
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||| ||||||||||||  ||||||||| |||||||||||||    
T  19123506 ttaccaattatatattacattttattatttgtatgtcaatccctttacaataaa 19123559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 625
Target Start/End: Original strand, 10409937 - 10409985
Alignment:
Q  577 attatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  10409937 attatatattgcattttattattcgtatgtcaatccctttacaataaac 10409985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 625
Target Start/End: Original strand, 23141383 - 23141431
Alignment:
Q  577 attatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  23141383 attatatattgcattttattattcgtatgtcaatccctttacaataaac 23141431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 16306110 - 16306164
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||| ||||||||||||  ||||||||| | ||||||||||||    
T  16306110 ttaccaattatatattacattttattattcgtatgtcaatccttttacaataaac 16306164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 23769645 - 23769699
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatccatacatcat 179  Q
    |||||||||||||||||| |||  || |||||||||||||||||||| |||||||    
T  23769645 aacaatttagtccaagacgctttattcccatattccttcataatccaaacatcat 23769699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 23819493 - 23819547
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatccatacatcat 179  Q
    |||||||||||||||||| |||  || |||||||||||||||||||| |||||||    
T  23819493 aacaatttagtccaagacgctttattcccatattccttcataatccaaacatcat 23819547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 41092349 - 41092295
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  |||||||||  |||||||||||||    
T  41092349 ttacctattatatattgcattttattattcgtatgtcaatcactttacaataaac 41092295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 20293044 - 20292995
Alignment:
Q  128 aatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||||||||||||   |||||||||||||||||||||| |||||    
T  20293044 aatttagtccaagactctttaattccatattccttcataatccaaacatc 20292995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 20305905 - 20305856
Alignment:
Q  128 aatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||||||||||||   |||||||||||||||||||||| |||||    
T  20305905 aatttagtccaagactctttaattccatattccttcataatccagacatc 20305856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 20310309 - 20310260
Alignment:
Q  128 aatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||||||||||||   |||||||||||||||||||||| |||||    
T  20310309 aatttagtccaagactctttaattccatattccttcataatccagacatc 20310260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 114 - 215
Target Start/End: Original strand, 23861014 - 23861115
Alignment:
Q  114 aaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaaac 213  Q
    |||||| ||| |||||||||||||||||| |||   | |||||||||||||| ||||| ||||||| || |||| ||  |||||| |||| ||| |||||    
T  23861014 aaggaatagtgaacaatttagtccaagacgctttcatcccatattccttcattatccaaacatcattactagaaatccagcacaaacaattcctgaaaac 23861113  T
Q  214 ac 215  Q
    ||    
T  23861114 ac 23861115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 571 - 624
Target Start/End: Complemental strand, 26522790 - 26522737
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    ||||| |||||||||||||||||||||||  |||||||||  ||||||||||||    
T  26522790 ttacctattatatattgcattttattattcgtatgtcaatctctttacaataaa 26522737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 3181767 - 3181715
Alignment:
Q  127 caatttagtccaagactcttggtttccatattccttcataatccatacatcat 179  Q
    ||||||| ||||||||||||  ||||||||||||||||||| ||| |||||||    
T  3181767 caatttaatccaagactcttcatttccatattccttcataagccaaacatcat 3181715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 16529360 - 16529416
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||| || ||||||||||||| ||||||  ||||||||| ||||||||||||||||    
T  16529360 ttacctatcatatattgcatttcattattcgtatgtcaatccctttacaataaactc 16529416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 7672825 - 7672771
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| ||||||||||||||||||| |||  ||||||||| ||| ||||||||||    
T  7672825 ttacctattatatattgcattttatcattcgtatgtcaatccctatacaataaac 7672771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 16538199 - 16538253
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| || ||||||||||||||||||||  ||||||||| ||| ||||||||||    
T  16538199 ttacctatcatatattgcattttattattcgtatgtcaatccctctacaataaac 16538253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 295 - 441
Target Start/End: Complemental strand, 23691283 - 23691137
Alignment:
Q  295 tgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaattt 394  Q
    ||||| |||||||| ||||| |||||||| |||||||||||   |||||| |||||| | | ||| | |||| |||||||||| | |||    |||||||    
T  23691283 tgcttcttggcgaatttgggatcagaaattagagaattccacagcttgcacacacatcgaaattgcatgaggggtttcaccggaagcctgtggagaattt 23691184  T
Q  395 ctagaatgacatcgaaaggaagagtgggaagcggctactcatgaagt 441  Q
     | |||||| |||| |||||| ||| ||||| ||| || ||||||||    
T  23691183 atggaatgagatcgcaaggaatagttggaagtggcgacgcatgaagt 23691137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 38004115 - 38004061
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||| || |||||| |||  |||||||||||||    
T  38004115 ttacctattatatattgcattttatttttcatatgtaaatctctttacaataaac 38004061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 20301492 - 20301443
Alignment:
Q  128 aatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||||||||||||   || ||||||||||||||||||| |||||    
T  20301492 aatttagtccaagactctttaattgcatattccttcataatccaaacatc 20301443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 23732230 - 23732165
Alignment:
Q  114 aaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatcat 179  Q
    |||||| ||| |||| |||| |||||||| |||  || |||||||||||||||||||| |||||||    
T  23732230 aaggaatagtgaacagtttattccaagacgctttattcccatattccttcataatccaaacatcat 23732165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 3e-19; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 47791421 - 47791474
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47791421 ttaccaattatatattgcattttattattcatatgtcaattcctttacaataaa 47791474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 21618815 - 21618869
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  21618815 ttaccaattatatattgcattttattatttgtatgtcaatccctttacaataaac 21618869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 39282407 - 39282460
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  39282407 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaa 39282460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 571 - 627
Target Start/End: Complemental strand, 16165271 - 16165215
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||| ||||||  ||||||||| ||||||||||||||||    
T  16165271 ttaccaattatatattgcatttcattattcgtatgtcaatccctttacaataaactc 16165215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 27296729 - 27296785
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  27296729 ttacctattatatattgcattttattattcgtatgtcaatccctttacaataaactc 27296785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 571 - 630
Target Start/End: Original strand, 44264529 - 44264588
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactctag 630  Q
    |||||||||||||||||||||||||||||  ||||| || ||||||||||||||| ||||    
T  44264529 ttaccaattatatattgcattttattattcgtatgttaaatcctttacaataaaccctag 44264588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 1648271 - 1648325
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  |||| |||| ||||||||||||||    
T  1648271 ttaccaattatatattgcattttattattcgtatgccaatccctttacaataaac 1648325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 4099973 - 4099919
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||    
T  4099973 ttaccaattatatattgaattttattattcgtatgtcaatccctttacaataaac 4099919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 12116080 - 12116134
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  12116080 ttacctattatatattgcattttattattcgtatgtcaatccctttacaataaac 12116134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 25931415 - 25931361
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  |||||||||  |||||||||||||    
T  25931415 ttaccaattatatattgcattttattattcgtatgtcaatcactttacaataaac 25931361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 625
Target Start/End: Original strand, 52741033 - 52741083
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  52741033 caattatatattgcattttattattcgtatgtcaatccctttacaataaac 52741083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 620
Target Start/End: Original strand, 21618695 - 21618744
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaa 620  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  21618695 ttaccaattatatattgcattttattatttgtatgtcaatccctttacaa 21618744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 21882783 - 21882836
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||||||  ||||||||| |||| ||||||||    
T  21882783 ttaccaattatatattgcattttattatttgtatgtcaatcccttaacaataaa 21882836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 627
Target Start/End: Complemental strand, 1155756 - 1155700
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||| |||||||||||||||||||||||  ||||||||| |||||| |||||||||    
T  1155756 ttacctattatatattgcattttattattcgtatgtcaatccctttataataaactc 1155700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 38685754 - 38685810
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||||||||||  ||||| ||| |||||| |||||||||    
T  38685754 ttaccaattatatattgcattttattattcttatgttaatccctttaaaataaactc 38685810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 623
Target Start/End: Complemental strand, 44099306 - 44099254
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataa 623  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||    
T  44099306 ttacctattatatattgcattttattattcgtatgtcaatccctttacaataa 44099254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 625
Target Start/End: Complemental strand, 48411658 - 48411610
Alignment:
Q  577 attatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  48411658 attatatattgcattttattattcgtatgtcaatccctttacaataaac 48411610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 626
Target Start/End: Original strand, 319015 - 319070
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaact 626  Q
    ||||| ||||||||||  |||||||||||  |||||||||||||||||||||||||    
T  319015 ttacctattatatattatattttattattcgtatgtcaattcctttacaataaact 319070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 573 - 624
Target Start/End: Original strand, 18913125 - 18913176
Alignment:
Q  573 accaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  18913125 accaattatatattgcattttattattcgtatatcaatccctttacaataaa 18913176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 630
Target Start/End: Complemental strand, 44451747 - 44451688
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactctag 630  Q
    |||||||||||||||||||||||||||||  ||| ||||| |||||| ||||||| ||||    
T  44451747 ttaccaattatatattgcattttattattcgtatatcaatccctttataataaaccctag 44451688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 51381441 - 51381500
Alignment:
Q  112 gtaaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatcca 171  Q
    |||||||| | | ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  51381441 gtaaggaatactgaacaatttagtccaagactcttcatttccatattctttcataatcca 51381500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 3226562 - 3226509
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||| ||||||  ||||||||| ||||||||||||||    
T  3226562 ttaccaattatatattgcattt-attattcgtatgtcaatccctttacaataaac 3226509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 24595624 - 24595678
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| ||||||||||||||||||||||  ||||||||||  |||||||||||||    
T  24595624 ttacctattatatattgcattttattatgcatatgtcaatctctttacaataaac 24595678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 28949588 - 28949534
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||| | ||||||||||||    
T  28949588 ttacctattatatattgcattttattattcgtatgtcaatccttttacaataaac 28949534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 51407548 - 51407605
Alignment:
Q  115 aggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccat 172  Q
    ||||||| | ||||||||||||||||||| ||  || |||||||||||||||||||||    
T  51407548 aggaacacttaacaatttagtccaagactgttcattcccatattccttcataatccat 51407605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 579 - 627
Target Start/End: Complemental strand, 52407553 - 52407505
Alignment:
Q  579 tatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||  |||| |||| ||||||||||||||||    
T  52407553 tatatattgcattttattattcgtatggcaatccctttacaataaactc 52407505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 374
Target Start/End: Complemental strand, 51831706 - 51831647
Alignment:
Q  315 ttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcac 374  Q
    |||||| |||||||| ||||| ||||||||||||||  ||||||||||||| | ||||||    
T  51831706 ttcagagataagagagttccatgacttgcagacacaacggagttgaaggagaaatttcac 51831647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 51858668 - 51858605
Alignment:
Q  115 aggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatca 178  Q
    ||||||| | ||||||||||||||||| |||   ||||||||||||||||| ||||| ||||||    
T  51858668 aggaacacttaacaatttagtccaagattctacatttccatattccttcatgatccaaacatca 51858605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 51782861 - 51782795
Alignment:
Q  115 aggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatcataa 181  Q
    ||||||| | || |||||| ||||||| | ||  ||||||||||||||||||||||| |||||||||    
T  51782861 aggaacacttaataatttattccaagattgttcatttccatattccttcataatccaaacatcataa 51782795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 575 - 624
Target Start/End: Complemental strand, 6537184 - 6537135
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||  ||||||||   ||||||||||||    
T  6537184 caattatatattgcattttattattcgtatgtcaacctctttacaataaa 6537135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 25609376 - 25609416
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcat 165  Q
    |||||||||||||||||||||||  || |||||||||||||    
T  25609376 aacaatttagtccaagactcttgaatttcatattccttcat 25609416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 322 - 374
Target Start/End: Original strand, 51382202 - 51382254
Alignment:
Q  322 ataagagaattccaggacttgcagacacattggagttgaaggaggagtttcac 374  Q
    |||||| ||||||| ||||||||||| ||  |||||||||||||| |||||||    
T  51382202 ataagataattccatgacttgcagacgcaacggagttgaaggaggtgtttcac 51382254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 4e-18; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 294 - 429
Target Start/End: Original strand, 22672866 - 22673001
Alignment:
Q  294 gtgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatt 393  Q
    |||||| || ||||| ||| | ||||| || ||||||||||| ||||||||| | |||||||| ||||||||||| |||||||| |||||||  || |||    
T  22672866 gtgcttcttagcgaatttgcgatcagagattagagaattccatgacttgcaggcgcattggagctgaaggaggagcttcaccggtaacctactaaggatt 22672965  T
Q  394 tctagaatgacatcgaaaggaagagtgggaagcggc 429  Q
    |||  ||||| ||| ||||||||||| || ||||||    
T  22672966 tcttcaatgagatcaaaaggaagagttggcagcggc 22673001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 325 - 425
Target Start/End: Original strand, 20020548 - 20020648
Alignment:
Q  325 agagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaatgacatcgaaaggaagagtgggaa 424  Q
    ||||||||||| || || || |||||| | |||||||||||||| ||||| || ||||||||||||||||||  |||||  |||||||||||| ||||||    
T  20020548 agagaattccatgaattacatacacatcgaagttgaaggaggagcttcactggtaacctacacagaatttcttcaatgaggtcgaaaggaagaatgggaa 20020647  T
Q  425 g 425  Q
    |    
T  20020648 g 20020648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 627
Target Start/End: Complemental strand, 54652963 - 54652907
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  54652963 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaactc 54652907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 2479113 - 2479059
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  2479113 ttaccaattatatattgcattttatcattcatatgtcaatccctttacaataaac 2479059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 125 - 219
Target Start/End: Original strand, 20019771 - 20019865
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatccatacatcataaccagaagtcacgcacaagcaatccctcaaaacacccaa 219  Q
    |||||||||||||||||||||||  |||||||||||||||| | ||| ||||||| ||||||| | | ||||||| |||| || || ||||||||    
T  20019771 aacaatttagtccaagactcttgaattccatattccttcatgacccaaacatcattaccagaaattatgcacaagaaatctcttaacacacccaa 20019865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 36639760 - 36639814
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  36639760 ttacctattatatattgcattttattattcgtatgtcaattcctttacaataaac 36639814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 52688670 - 52688616
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  52688670 ttaccaattatatattgcattttattatttgtatgtcaatccctttacaataaac 52688616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 22293676 - 22293729
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  22293676 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaa 22293729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 624
Target Start/End: Complemental strand, 28379376 - 28379323
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  28379376 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaa 28379323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 624
Target Start/End: Complemental strand, 47427857 - 47427804
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    ||||||||||||||||||||||||||||| |||||||||| | |||||||||||    
T  47427857 ttaccaattatatattgcattttattattcatatgtcaatccttttacaataaa 47427804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 2177825 - 2177879
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  |||| |||| ||||||||||||||    
T  2177825 ttaccaattatatattgcattttattattcgtatgccaatccctttacaataaac 2177879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 8478595 - 8478541
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  8478595 ttacctattatatattgcattttattatttgtatgtcaatccctttacaataaac 8478541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 12795574 - 12795520
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  12795574 ttacctattatatattgcattttattattcgtatgtcaatccctttacaataaac 12795520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 18000334 - 18000280
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  | ||||||| ||||||||||||||    
T  18000334 ttaccaattatatattgcattttattattcgtttgtcaatccctttacaataaac 18000280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 23952205 - 23952151
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  23952205 ttacctattatatattgcattttattattcgtatgtcaatccctttacaataaac 23952151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 625
Target Start/End: Complemental strand, 53143092 - 53143042
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  53143092 caattatatattgcattttattatttgtatgtcaatccctttacaataaac 53143042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 576 - 625
Target Start/End: Original strand, 4942393 - 4942442
Alignment:
Q  576 aattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  4942393 aattatatattgcattttattattcgtatgtcaatccctttacaataaac 4942442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 28813910 - 28813963
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||| ||||  |||||||||||||| ||||||||    
T  28813910 ttaccaattatatattgcattttaatattcgtatgtcaattccttcacaataaa 28813963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 575 - 624
Target Start/End: Complemental strand, 41850944 - 41850895
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  41850944 caattatatattgcattttattattcgtatgtcaattcctttacgataaa 41850895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 576 - 625
Target Start/End: Original strand, 44500944 - 44500993
Alignment:
Q  576 aattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  44500944 aattatatattgcattttattattcgtatgtcaatccctttacaataaac 44500993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 47769362 - 47769415
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    ||||| |||||||||||||||||||||||  ||||||||| |||||||||||||    
T  47769362 ttacctattatatattgcattttattattcgtatgtcaatccctttacaataaa 47769415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 620
Target Start/End: Complemental strand, 52688790 - 52688741
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaa 620  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  52688790 ttaccaattatatattgcattttattatttgtatgtcaatccctttacaa 52688741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 48076769 - 48076825
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||| || ||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  48076769 ttacctatcatatattgcattttattattcgtatgtcaatccctttacaataaactc 48076825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 20016184 - 20016247
Alignment:
Q  125 aacaatttagtccaagactcttggtttccatattccttcataatcc-atacatcataaccagaa 187  Q
    |||||||||||||||||||||||  |||||||||||||||| |||| | ||||||| |||||||    
T  20016184 aacaatttagtccaagactcttgaattccatattccttcatgatccaaaacatcattaccagaa 20016247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 625
Target Start/End: Original strand, 8119293 - 8119343
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||  ||||||||| ||||| ||||||||    
T  8119293 caattatatattgcattttattattcgtatgtcaatccctttgcaataaac 8119343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 29968571 - 29968625
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||| ||||||  ||||||||| ||| ||||||||||    
T  29968571 ttaccaattatatattgcatttcattattcgtatgtcaatccctatacaataaac 29968625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 32010563 - 32010509
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| || ||||||||||||||||||||  ||||||||| ||||||||||||||    
T  32010563 ttacctataatatattgcattttattattcgtatgtcaatccctttacaataaac 32010509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 572 - 610
Target Start/End: Complemental strand, 8396965 - 8396927
Alignment:
Q  572 taccaattatatattgcattttattattgatatgtcaat 610  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  8396965 taccaattatatattgcattttattattcgtatgtcaat 8396927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 24050944 - 24050998
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||| ||||||||||||||||||||||||  |||||||||   ||||||||||||    
T  24050944 ttactaattatatattgcattttattattcgtatgtcaatctttttacaataaac 24050998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 37325303 - 37325357
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  |||||||||   ||||||||||||    
T  37325303 ttacctattatatattgcattttattattcttatgtcaatctatttacaataaac 37325357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 13441 - 13497
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  13441 ttaccaattatatattgcattttattattcgtatgtcaattcctttacgataaactc 13497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 3e-16; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 38111716 - 38111772
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  38111716 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaactc 38111772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 30206529 - 30206582
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  30206529 ttaccaattatatattgcattttattatttgtatgtcaatccctttacaataaa 30206582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 14683415 - 14683471
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||||||||| |||||||||||||||||  ||||||||| ||||||||||||||||    
T  14683415 ttaccaattatgtattgcattttattattcgtatgtcaatccctttacaataaactc 14683471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 23959983 - 23959929
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||| |||||||    
T  23959983 ttaccaattatatattgcattttattattcgtatgtcaatccctttataataaac 23959929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 625
Target Start/End: Original strand, 35618029 - 35618079
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  35618029 caattatatattgcattttattattcgtatgtcaattcctttacaagaaac 35618079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 39921923 - 39921869
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  39921923 ttacctattatatattgcattttattattcgtatgtcaatccctttacaataaac 39921869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 42046069 - 42046123
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  42046069 ttacctattatatattgcattttattattcgtatgtcaatccctttacaataaac 42046123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 627
Target Start/End: Complemental strand, 603945 - 603889
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||  ||||||||||    
T  603945 ttaccaattatatattgcattttattattcgtatgtcaatcccttagcaataaactc 603889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 301 - 425
Target Start/End: Complemental strand, 19727235 - 19727111
Alignment:
Q  301 ttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaa 400  Q
    |||||||| ||| | ||||| || ||||||||| | |||||||| |||||| |||  || | ||||| |||||| || | |||||  ||||||||| |||    
T  19727235 ttggcgaatttgtgatcagagattagagaattcaacgacttgcaaacacatcggaactgcaagaggaatttcacgggtagcctacttagaatttctggaa 19727136  T
Q  401 tgacatcgaaaggaagagtgggaag 425  Q
    ||| ||||||||||||||| |||||    
T  19727135 tgagatcgaaaggaagagtaggaag 19727111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 44434613 - 44434669
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||||||||||| |||||||||||||||  |||||||||  |||||||||||||||    
T  44434613 ttaccaattatattttgcattttattattcgtatgtcaatcgctttacaataaactc 44434669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 23086385 - 23086439
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||||||||||||||||||||||||||   ||||||||| |||||||| |||||    
T  23086385 ttaccaattatatattgcattttattatccgtatgtcaatccctttacagtaaac 23086439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 37197375 - 37197321
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||| ||||| ||||||||||||||    
T  37197375 ttacctattatatattgcattttattattcgtatatcaatccctttacaataaac 37197321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 9389506 - 9389559
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||||||  ||||||||| | |||| ||||||    
T  9389506 ttaccaattatatattgcattttattattcgtatgtcaatccttttataataaa 9389559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 32063223 - 32063276
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    ||||| |||||||||||||||||||||||  ||||| ||| |||||||||||||    
T  32063223 ttacctattatatattgcattttattattcgtatgttaatccctttacaataaa 32063276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 571 - 627
Target Start/End: Complemental strand, 27853065 - 27853009
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||| ||||||||||||||||||||||  ||||| |||  |||||||||||||||    
T  27853065 ttaccagttatatattgcattttattattcgtatgttaatctctttacaataaactc 27853009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 582 - 625
Target Start/End: Original strand, 1199865 - 1199908
Alignment:
Q  582 atattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||| ||||||||||  |||||||||||||    
T  1199865 atattgcattttattattcatatgtcaatcactttacaataaac 1199908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 417
Target Start/End: Original strand, 31145148 - 31145255
Alignment:
Q  310 ttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatttctagaatgacatcga 409  Q
    ||||| ||||| |||||||||||||| |||||||| ||||| |||| ||| | ||||| |||||| || |  ||||| || || |||  ||||| |||||    
T  31145148 ttgggatcagatataagagaattccatgacttgcaaacacactggaattgtatgaggaatttcacagggagtctacagaggatatctgtaatgagatcga 31145247  T
Q  410 aaggaaga 417  Q
    ||||||||    
T  31145248 aaggaaga 31145255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 574 - 625
Target Start/End: Original strand, 34948251 - 34948302
Alignment:
Q  574 ccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||||||||||| ||||||||||||  ||||||||| | ||||||||||||    
T  34948251 ccaattatatattacattttattattcgtatgtcaatccatttacaataaac 34948302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 621
Target Start/End: Original strand, 44015142 - 44015192
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaat 621  Q
    |||||| ||||||||||||||||| ||||  ||||||||| ||||||||||    
T  44015142 ttaccagttatatattgcattttactattcgtatgtcaatacctttacaat 44015192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 571 - 599
Target Start/End: Complemental strand, 13461363 - 13461335
Alignment:
Q  571 ttaccaattatatattgcattttattatt 599  Q
    |||||||||||||||||||||||||||||    
T  13461363 ttaccaattatatattgcattttattatt 13461335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 16673914 - 16673970
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  16673914 ttaccaattatatattgcattttattatttgtatgtcaatccctttacaataaactc 16673970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 17648282 - 17648338
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  17648282 ttaccaattatatattgcattttattatttgtatgtcaatccctttacaataaactc 17648338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 6250458 - 6250512
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  6250458 ttaccaattatatattacattttattatttatatgtcaatccctttacaataaac 6250512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 21128806 - 21128860
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  21128806 ttaccaattatatattgcattttattattcgtatgtcaattcctttccaataaac 21128860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 32277732 - 32277678
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  32277732 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaac 32277678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 1078227 - 1078302
Alignment:
Q  175 atcataaccagaagtcacgcacaagcaatccctcaaaacacccaaagctgataagtcacacacatctacccctcca 250  Q
    ||||| || ||||| || |||||||||||||||||| |||||||| ||| | |||| |||||||||||||||||||    
T  1078227 atcatcacgagaagccaggcacaagcaatccctcaacacacccaaggctaagaagtgacacacatctacccctcca 1078302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 2354123 - 2354069
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  2354123 ttacctattatatattgcattttattattcgtatgtcaatccctttacaataaac 2354069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 567 - 625
Target Start/End: Complemental strand, 4680599 - 4680541
Alignment:
Q  567 acctttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||||||| |||||||||||||||||||||||  |||||||||  |||||||||||||    
T  4680599 acctttacctattatatattgcattttattattcgtatgtcaatctctttacaataaac 4680541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 4681321 - 4681267
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  4681321 ttacctattatatattgcattttattattcgtatgtcaatccctttacaataaac 4681267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 621
Target Start/End: Complemental strand, 12140551 - 12140501
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaat 621  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  12140551 ttacctattatatattgcattttattatttatatgtcaatccctttacaat 12140501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 625
Target Start/End: Original strand, 34838269 - 34838319
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  34838269 caattatatattgcattttattattcgtatgtcaatccctttacaataaac 34838319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 625
Target Start/End: Complemental strand, 40449442 - 40449392
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  40449442 caattatatattgcattttattattcgtatgtcaatccctttacaataaac 40449392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 40686238 - 40686184
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||   ||||||||||||||| |||||||    
T  40686238 ttaccaattatatattgcattttattattcgcatgtcaattcctttataataaac 40686184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 577 - 626
Target Start/End: Complemental strand, 2852904 - 2852855
Alignment:
Q  577 attatatattgcattttattattgatatgtcaattcctttacaataaact 626  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  2852904 attatatattgcattttattattcgtatgtcaatccctttacaataaact 2852855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 624
Target Start/End: Complemental strand, 22967845 - 22967792
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||||||  ||||||||| |||| ||||||||    
T  22967845 ttaccaattatatattgcattttattatttgtatgtcaatcccttaacaataaa 22967792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 575 - 624
Target Start/End: Complemental strand, 45418376 - 45418327
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  45418376 caattatatattgcattttattatttgtatgtcaatccctttacaataaa 45418327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 575 - 627
Target Start/End: Complemental strand, 5553641 - 5553589
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||| |||||||||||| |||||||||| |||| |||||||||||    
T  5553641 caattatatatttcattttattattcatatgtcaatcccttaacaataaactc 5553589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 22325027 - 22325083
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||||||||||  |||||||||  |||| ||||||||||    
T  22325027 ttaccaattatatattgcattttattattcgtatgtcaatctcttttcaataaactc 22325083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 35125518 - 35125574
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||||||||||||||||||||||||||  |||| | ||| ||||||||||||||||    
T  35125518 ttaccaattatatattgcattttattatccatatattaatccctttacaataaactc 35125574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 571 - 626
Target Start/End: Complemental strand, 16491695 - 16491640
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaact 626  Q
    ||||||||||||||||| |||||||||||  ||  |||||||||||||||||||||    
T  16491695 ttaccaattatatattgtattttattatttgtaaatcaattcctttacaataaact 16491640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 9141071 - 9141017
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||| ||||||||||| ||||||||||||  ||||||||| ||||||||||||||    
T  9141071 ttactaattatatatttcattttattattcgtatgtcaatccctttacaataaac 9141017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 16362256 - 16362202
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||| ||||||||||||||  ||||||||| ||||||||||||||    
T  16362256 ttacctattatatagtgcattttattattcgtatgtcaatccctttacaataaac 16362202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 571 - 624
Target Start/End: Complemental strand, 22773601 - 22773548
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    ||||| |||||||||||||||||||||||  ||||||||| | |||||||||||    
T  22773601 ttacctattatatattgcattttattattcgtatgtcaatccttttacaataaa 22773548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 30991684 - 30991737
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    ||||| || ||||||||||||||||||||  ||||||||| |||||||||||||    
T  30991684 ttacctatcatatattgcattttattattcgtatgtcaatccctttacaataaa 30991737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 580 - 624
Target Start/End: Original strand, 11650202 - 11650246
Alignment:
Q  580 atatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||    
T  11650202 atatattgcattttattattcgtatgtcaatccctttacaataaa 11650246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 626
Target Start/End: Complemental strand, 24787438 - 24787382
Alignment:
Q  570 tttaccaattatatattgcattttattattgatatgtcaattcctttacaataaact 626  Q
    ||||| ||||||||||||||||||||||||  ||||||||| |||| | ||||||||    
T  24787438 tttacaaattatatattgcattttattatttttatgtcaatcccttaataataaact 24787382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 627
Target Start/End: Complemental strand, 27712015 - 27711963
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||||||  |||||||||  ||||| |||||||||    
T  27712015 caattatatattgcattttattattcgtatgtcaatatctttataataaactc 27711963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 574 - 625
Target Start/End: Complemental strand, 1566029 - 1565978
Alignment:
Q  574 ccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||||||||||||||||||| | ||  ||||||||| ||||||||||||||    
T  1566029 ccaattatatattgcattttactgttcgtatgtcaatccctttacaataaac 1565978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 610
Target Start/End: Original strand, 21225067 - 21225106
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaat 610  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  21225067 ttaccaattatatattgcaatttattattcatatgtcaat 21225106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 11642224 - 11642170
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||| ||||||||||||||||||| ||  ||| ||||||| ||||||||||||    
T  11642224 ttaccatttatatattgcattttatttttcgtatatcaattcttttacaataaac 11642170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 18487930 - 18487984
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||| || |||||||||||||||  ||||||||| ||||||| ||||||    
T  18487930 ttaccaattacattttgcattttattattcgtatgtcaatccctttactataaac 18487984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 395
Target Start/End: Complemental strand, 39298502 - 39298401
Alignment:
Q  294 gtgctttttggcgaagttgggttcagaaataagagaattccaggacttgcagacacattggagttgaaggaggagtttcaccggcaacctacacagaatt 393  Q
    |||||| || ||||| ||||| || || || ||||| |||||| |||| | || |||||| |||||||||||||| ||||| || |||||| | ||||||    
T  39298502 gtgcttcttcgcgaatttgggatctgagattagagatttccagaactttccgagacattgaagttgaaggaggagcttcactggtaacctagatagaatt 39298403  T
Q  394 tc 395  Q
    ||    
T  39298402 tc 39298401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 571 - 624
Target Start/End: Complemental strand, 40409254 - 40409202
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    ||||| |||||||||||||||||||| ||  ||||||||| |||||||||||||    
T  40409254 ttacctattatatattgcattttatt-ttcgtatgtcaatccctttacaataaa 40409202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 20709602 - 20709658
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  20709602 ttaccaattatatattgcattttattattcgtatgtcaattcctttacgataaactc 20709658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 833363 - 833309
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  833363 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaac 833309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 2132055 - 2132001
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  2132055 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaac 2132001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 11658246 - 11658300
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  11658246 ttaccaattatatattgcattttattattcgtatgtcaatgcctttacaataaac 11658300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 28611605 - 28611551
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  28611605 ttaccaattatatattgcattttattatttgtatgtcaatccctttacaataaac 28611551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 37130842 - 37130788
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  37130842 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaac 37130788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 36577421 - 36577366
Alignment:
Q  122 gtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||||| |||||    
T  36577421 gtaaacaatttaatccaagactctttatttccatattccttcataatccaaacatc 36577366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 8430646 - 8430593
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  8430646 ttaccaattatatattgcattttattattcgtatgtcaa-tcctttacaataaac 8430593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 625
Target Start/End: Complemental strand, 14335906 - 14335856
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  14335906 caattatatattgcattttattattcgtatgtcaatccctttacaataaac 14335856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 20639862 - 20639808
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  | ||||||| ||||||||||||||    
T  20639862 ttaccaattatatattgcattttattattcgtttgtcaatccctttacaataaac 20639808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 572 - 625
Target Start/End: Complemental strand, 10128864 - 10128811
Alignment:
Q  572 taccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||||||||||||| ||||||||||||  ||||||||| ||||||||||||||    
T  10128864 taccaattatatatttcattttattattcgtatgtcaatccctttacaataaac 10128811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 11736855 - 11736908
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||| ||||||||||||||||||||||  ||||||||| |||||||||||||    
T  11736855 ttaccagttatatattgcattttattattcgtatgtcaatccctttacaataaa 11736908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 575 - 624
Target Start/End: Original strand, 41327167 - 41327216
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  41327167 caattatatattgcattttattattcgtatgtcaatccctttacaataaa 41327216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 627
Target Start/End: Original strand, 6348476 - 6348536
Alignment:
Q  567 acctttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||||||| |||||||||||||||||||| ||  ||| ||||| ||||||||||||||||    
T  6348476 acctttacctattatatattgcattttatttttcgtatatcaatccctttacaataaactc 6348536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 33038211 - 33038159
Alignment:
Q  126 acaatttagtccaagactcttggtttccatattccttcataatccatacatca 178  Q
    ||||| |||||||||||| || |||||||||||||||||||||||| ||||||    
T  33038211 acaatctagtccaagactttttgtttccatattccttcataatccaaacatca 33038159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 12896123 - 12896069
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||| ||||||    
T  12896123 ttacctattatatattgcattttattattcgtatgtcaatccctttacgataaac 12896069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 27351590 - 27351536
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||  ||||||||    
T  27351590 ttaccaattatatattgcattttattattcgtatgtcaatcccttatcaataaac 27351536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 30556920 - 30556866
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||||||||||||||||||||||||||| |||| ||||| | || |||||||||    
T  30556920 ttaccaattatatattgcattttattatttatatttcaatcctttaacaataaac 30556866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 44543443 - 44543389
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||||||||| | ||||||||||||    
T  44543443 ttacctattatatattgcattttattattcgtatgtcaatccatttacaataaac 44543389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 112 - 177
Target Start/End: Original strand, 7174359 - 7174424
Alignment:
Q  112 gtaaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccatacatc 177  Q
    ||||||||||   |||||| |||||||||| ||||| ||||||||||||||||||| ||| |||||    
T  7174359 gtaaggaacacggaacaatctagtccaagaatcttgatttccatattccttcataagccagacatc 7174424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 571 - 624
Target Start/End: Original strand, 17370675 - 17370728
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaa 624  Q
    ||||||||||||||||| |||||||||||  |||||||||  ||||||||||||    
T  17370675 ttaccaattatatattgtattttattattcgtatgtcaatctctttacaataaa 17370728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 571 - 626
Target Start/End: Original strand, 12898642 - 12898697
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaact 626  Q
    ||||| ||||||||||| |||||||||||   |||||||| |||||||||||||||    
T  12898642 ttacctattatatattgtattttattattcgcatgtcaatccctttacaataaact 12898697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 33020364 - 33020314
Alignment:
Q  126 acaatttagtccaagactcttggtttccatattccttcataatccatacat 176  Q
    ||||| |||||||||||| ||  ||||||||||||||||||||||| ||||    
T  33020364 acaatctagtccaagactttttatttccatattccttcataatccacacat 33020314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 29550737 - 29550793
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||| |||||||| || |||||||||||  ||||||||| | ||||||||||||||    
T  29550737 ttacctattatatactgtattttattattcgtatgtcaatccatttacaataaactc 29550793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 1394367 - 1394421
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  1394367 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaac 1394421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 17203579 - 17203633
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  17203579 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaac 17203633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 17905559 - 17905505
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  17905559 ttaccaattatatattgcattttattattcgtatgtcaatccctttacaataaac 17905505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 4099636 - 4099582
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  4099636 ttactaattatatattgcattttattattcgtatgtcaatccctttacaataaac 4099582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 625
Target Start/End: Original strand, 34294612 - 34294662
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||||  || |||||||||||||||||||||    
T  34294612 caattatatattgcattttattattcgtacgtcaattcctttacaataaac 34294662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 19119128 - 19119075
Alignment:
Q  112 gtaaggaacagtaaacaatttagtccaagactcttggtttccatattccttcat 165  Q
    ||||||||||  |||||||||||||||||||||||  |||||||||||||||||    
T  19119128 gtaaggaacatgaaacaatttagtccaagactcttcatttccatattccttcat 19119075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 19126422 - 19126369
Alignment:
Q  112 gtaaggaacagtaaacaatttagtccaagactcttggtttccatattccttcat 165  Q
    ||||||||||  |||||||||||||||||||||||  |||||||||||||||||    
T  19126422 gtaaggaacatgaaacaatttagtccaagactcttcatttccatattccttcat 19126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 625
Target Start/End: Original strand, 25068605 - 25068653
Alignment:
Q  577 attatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  25068605 attatatattgcattttattattcgtatgtcaatccctttacaataaac 25068653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 4810762 - 4810708
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  |||||||||  |||||||||||||    
T  4810762 ttacctattatatattgcattttattattcgtatgtcaatctctttacaataaac 4810708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 9829327 - 9829381
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||||||||||||||||||||||  ||| ||||| ||||||||||||||    
T  9829327 ttacctattatatattgcattttattattcgtatatcaatccctttacaataaac 9829381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 29202801 - 29202855
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||| |||||||||||   ||||||||| ||||||||||||||    
T  29202801 ttaccaattatatattacattttattatccgtatgtcaatccctttacaataaac 29202855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 374
Target Start/End: Original strand, 4183768 - 4183820
Alignment:
Q  322 ataagagaattccaggacttgcagacacattggagttgaaggaggagtttcac 374  Q
    ||||||||||||||||||||||| || ||  |||||||||||||| |||||||    
T  4183768 ataagagaattccaggacttgcaaacgcaacggagttgaaggaggtgtttcac 4183820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 24417486 - 24417536
Alignment:
Q  126 acaatttagtccaagactcttggtttccatattccttcataatccatacat 176  Q
    |||||||||||||||| ||||  ||||||||||| ||||||||||| ||||    
T  24417486 acaatttagtccaagattctttatttccatattctttcataatccaaacat 24417536  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 1442098 - 1442154
Alignment:
Q  116 ggaacagtaaacaatttagtccaagactcttggtttccatattccttcataatccat 172  Q
    |||||||| ||||||||||||||||| ||||   ||||||| |||||||||| ||||    
T  1442098 ggaacagtgaacaatttagtccaagaatctttaattccataatccttcataacccat 1442154  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 571 - 599
Target Start/End: Complemental strand, 2969709 - 2969681
Alignment:
Q  571 ttaccaattatatattgcattttattatt 599  Q
    |||||||||||||||||||||||||||||    
T  2969709 ttaccaattatatattgcattttattatt 2969681  T

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Target: scaffold0090 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 575 - 627
Target Start/End: Complemental strand, 12049 - 11997
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaactc 627  Q
    ||||||||||||||||||||||||| |||||||||| |||| | |||||||||    
T  12049 caattatatattgcattttattattcatatgtcaatcccttaataataaactc 11997  T

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Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 89208 - 89153
Alignment:
Q  112 gtaaggaacagtaaacaatttagtccaagactcttggtttccatattccttcataa 167  Q
    |||||||||| |  |||||||||||||||||||||  |||||||||||||||||||    
T  89208 gtaaggaacattgtacaatttagtccaagactctttatttccatattccttcataa 89153  T

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Target: scaffold0294 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 625
Target Start/End: Complemental strand, 12208 - 12158
Alignment:
Q  575 caattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||| |||||||||||||||||| ||||||||||  |||||||||||||    
T  12208 caattacatattgcattttattattcatatgtcaatcactttacaataaac 12158  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 163467 - 163413
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    ||||| |||| ||||||||||||||||||  ||||||||| ||||||||||||||    
T  163467 ttacctattacatattgcattttattattcgtatgtcaatccctttacaataaac 163413  T

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Target: scaffold0059 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 625
Target Start/End: Complemental strand, 70663 - 70609
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||| ||||||||||||||  ||| ||||| |||| |||||||||    
T  70663 ttaccaattatataatgcattttattattcgtatctcaatcccttaacaataaac 70609  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 571 - 625
Target Start/End: Original strand, 104985 - 105039
Alignment:
Q  571 ttaccaattatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||| ||||||||||||||  ||| ||||| |||||| |||||||    
T  104985 ttaccaattatataatgcattttattattcgtatctcaatccctttataataaac 105039  T

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Target: scaffold0167 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 577 - 625
Target Start/End: Original strand, 16594 - 16642
Alignment:
Q  577 attatatattgcattttattattgatatgtcaattcctttacaataaac 625  Q
    |||||||||||||||||||||||  ||||||||||  | ||||||||||    
T  16594 attatatattgcattttattattcgtatgtcaattattgtacaataaac 16642  T

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