View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3815_low_5 (Length: 393)

Name: NF3815_low_5
Description: NF3815
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3815_low_5
NF3815_low_5
[»] chr2 (70 HSPs)
chr2 (1-313)||(45076338-45076636)
chr2 (2-154)||(36103392-36103544)
chr2 (2-142)||(15239703-15239843)
chr2 (1-144)||(28143752-28143897)
chr2 (3-148)||(40534518-40534663)
chr2 (3-148)||(25795243-25795388)
chr2 (2-127)||(23464522-23464648)
chr2 (13-139)||(27306719-27306843)
chr2 (3-144)||(41464712-41464853)
chr2 (16-148)||(6971581-6971713)
chr2 (15-144)||(3365284-3365413)
chr2 (19-143)||(9373404-9373528)
chr2 (4-140)||(27311590-27311726)
chr2 (1-151)||(38448940-38449090)
chr2 (19-142)||(11687486-11687609)
chr2 (3-136)||(41153128-41153261)
chr2 (4-129)||(31853163-31853287)
chr2 (22-154)||(12962722-12962854)
chr2 (1-155)||(25795234-25795388)
chr2 (236-311)||(31858296-31858373)
chr2 (3-136)||(12873721-12873854)
chr2 (79-143)||(21424911-21424975)
chr2 (90-137)||(14329223-14329270)
chr2 (22-136)||(28248950-28249064)
chr2 (22-136)||(32457230-32457344)
chr2 (22-155)||(4063289-4063421)
chr2 (82-155)||(9152456-9152529)
chr2 (79-136)||(10205000-10205057)
chr2 (22-135)||(11030210-11030323)
chr2 (22-67)||(11794466-11794511)
chr2 (79-156)||(12486066-12486143)
chr2 (3-52)||(15239690-15239739)
chr2 (106-155)||(15239793-15239842)
chr2 (106-155)||(28143846-28143895)
chr2 (22-155)||(29988909-29989042)
chr2 (14-63)||(44283623-44283672)
chr2 (106-155)||(45076340-45076389)
chr2 (114-146)||(6971503-6971535)
chr2 (263-303)||(34819838-34819878)
chr2 (22-154)||(38982998-38983130)
chr2 (17-68)||(4755474-4755525)
chr2 (56-142)||(11724321-11724408)
chr2 (79-154)||(30761452-30761527)
chr2 (9-155)||(40534517-40534663)
chr2 (23-74)||(44460603-44460654)
chr2 (4-155)||(45571029-45571179)
chr2 (4-155)||(45574696-45574846)
chr2 (4-155)||(45578363-45578513)
chr2 (4-155)||(45582030-45582180)
chr2 (4-155)||(45585697-45585847)
chr2 (4-155)||(45589364-45589514)
chr2 (4-155)||(45593031-45593181)
chr2 (4-155)||(45596698-45596848)
chr2 (4-155)||(45600365-45600515)
chr2 (4-155)||(45604032-45604182)
chr2 (4-155)||(45607699-45607849)
chr2 (4-155)||(45611366-45611516)
chr2 (4-155)||(45615033-45615183)
chr2 (114-144)||(6971579-6971609)
chr2 (79-136)||(2936367-2936424)
chr2 (26-155)||(9152377-9152506)
chr2 (22-147)||(34447510-34447634)
chr2 (106-155)||(36103494-36103543)
chr2 (105-146)||(38449038-38449079)
chr2 (20-153)||(41824272-41824404)
chr2 (79-136)||(43713991-43714048)
chr2 (81-154)||(45034473-45034546)
chr2 (4-52)||(6971671-6971719)
chr2 (4-52)||(27311576-27311624)
chr2 (341-373)||(45076672-45076704)
[»] chr7 (71 HSPs)
chr7 (2-155)||(41487788-41487941)
chr7 (11-155)||(22618169-22618313)
chr7 (3-147)||(47484027-47484171)
chr7 (9-155)||(24164520-24164666)
chr7 (4-145)||(40198603-40198744)
chr7 (2-155)||(37006454-37006608)
chr7 (1-147)||(41395668-41395814)
chr7 (10-148)||(45025599-45025737)
chr7 (4-148)||(41088851-41088995)
chr7 (4-147)||(18064721-18064864)
chr7 (16-155)||(27320305-27320444)
chr7 (16-148)||(29559442-29559574)
chr7 (19-154)||(47280173-47280309)
chr7 (4-157)||(10674122-10674275)
chr7 (16-148)||(33901049-33901181)
chr7 (2-105)||(12806905-12807008)
chr7 (4-155)||(47612289-47612440)
chr7 (9-139)||(45123249-45123379)
chr7 (9-142)||(13860229-13860361)
chr7 (3-154)||(24932381-24932518)
chr7 (15-140)||(31902963-31903088)
chr7 (16-141)||(33039572-33039699)
chr7 (48-154)||(40234765-40234871)
chr7 (35-148)||(7456424-7456537)
chr7 (16-147)||(3633197-3633328)
chr7 (19-142)||(14543282-14543405)
chr7 (16-148)||(28248442-28248578)
chr7 (4-155)||(28677315-28677466)
chr7 (22-155)||(36245374-36245507)
chr7 (22-147)||(41850613-41850738)
chr7 (29-143)||(39413852-39413966)
chr7 (4-144)||(29559436-29559576)
chr7 (90-155)||(40599998-40600063)
chr7 (106-155)||(45025592-45025641)
chr7 (29-136)||(39153304-39153411)
chr7 (33-112)||(7999489-7999568)
chr7 (90-144)||(3633276-3633330)
chr7 (106-148)||(24164521-24164563)
chr7 (23-129)||(40142797-40142903)
chr7 (9-154)||(41088851-41088996)
chr7 (1-88)||(48948938-48949027)
chr7 (79-136)||(2399969-2400026)
chr7 (22-135)||(8566099-8566212)
chr7 (3-155)||(41487789-41487941)
chr7 (4-155)||(11668013-11668164)
chr7 (90-148)||(13860302-13860360)
chr7 (2-52)||(24164617-24164667)
chr7 (23-145)||(29365629-29365751)
chr7 (22-136)||(45533247-45533361)
chr7 (22-155)||(2610204-2610336)
chr7 (79-136)||(6838449-6838506)
chr7 (106-155)||(12806906-12806955)
chr7 (2-154)||(47612289-47612441)
chr7 (23-139)||(29835099-29835214)
chr7 (106-154)||(33901037-33901085)
chr7 (106-154)||(40198603-40198651)
chr7 (9-52)||(10674224-10674267)
chr7 (106-145)||(24932391-24932430)
chr7 (3-66)||(27320381-27320444)
chr7 (222-257)||(46864858-46864893)
chr7 (81-155)||(4826837-4826911)
chr7 (113-147)||(19372732-19372766)
chr7 (10-52)||(22618264-22618306)
chr7 (81-135)||(32811396-32811450)
chr7 (3-136)||(2523787-2523920)
chr7 (82-155)||(44682564-44682637)
chr7 (3-52)||(45025695-45025744)
chr7 (4-68)||(10007661-10007725)
chr7 (10-70)||(28936059-28936119)
chr7 (90-154)||(36245461-36245525)
chr7 (106-155)||(48948940-48948991)
[»] chr8 (59 HSPs)
chr8 (2-155)||(34604778-34604931)
chr8 (3-155)||(13831873-13832025)
chr8 (3-154)||(7548496-7548648)
chr8 (16-148)||(29690447-29690579)
chr8 (4-155)||(45372704-45372855)
chr8 (3-155)||(35583881-35584033)
chr8 (3-144)||(43292566-43292707)
chr8 (2-155)||(43932047-43932200)
chr8 (1-157)||(34745253-34745409)
chr8 (16-139)||(44579907-44580030)
chr8 (22-137)||(38298517-38298632)
chr8 (2-155)||(43409832-43409985)
chr8 (19-145)||(38494253-38494379)
chr8 (50-148)||(40645715-40645813)
chr8 (16-145)||(9633092-9633221)
chr8 (79-154)||(45180113-45180188)
chr8 (10-144)||(24599674-24599808)
chr8 (22-136)||(7693050-7693164)
chr8 (17-155)||(9550107-9550245)
chr8 (41-154)||(41624737-41624850)
chr8 (22-155)||(8793736-8793869)
chr8 (2-155)||(43932046-43932199)
chr8 (106-155)||(34745255-34745304)
chr8 (106-155)||(43292566-43292615)
chr8 (3-142)||(27108000-27108139)
chr8 (97-154)||(8242137-8242194)
chr8 (2-123)||(10184581-10184702)
chr8 (3-155)||(34604779-34604931)
chr8 (22-155)||(35149666-35149799)
chr8 (79-155)||(5031538-5031614)
chr8 (43-155)||(9420585-9420697)
chr8 (4-147)||(10839762-10839904)
chr8 (22-157)||(34711098-34711232)
chr8 (2-155)||(35011209-35011363)
chr8 (28-154)||(3236353-3236479)
chr8 (22-148)||(16448794-16448920)
chr8 (29-155)||(42122964-42123090)
chr8 (106-155)||(13831976-13832025)
chr8 (90-155)||(30734516-30734581)
chr8 (79-136)||(32597515-32597572)
chr8 (81-158)||(44796417-44796494)
chr8 (16-148)||(5356804-5356936)
chr8 (90-145)||(9633089-9633144)
chr8 (4-155)||(22429534-22429684)
chr8 (18-49)||(38494343-38494374)
chr8 (104-155)||(43409933-43409984)
chr8 (104-154)||(5356792-5356842)
chr8 (22-68)||(6616591-6616637)
chr8 (81-155)||(12958851-12958925)
chr8 (22-68)||(14578516-14578562)
chr8 (4-61)||(15726851-15726908)
chr8 (79-136)||(24618975-24619032)
chr8 (3-52)||(34745358-34745407)
chr8 (90-155)||(35794611-35794676)
chr8 (3-68)||(43409832-43409897)
chr8 (4-52)||(7548496-7548544)
chr8 (1-45)||(9550105-9550149)
chr8 (4-52)||(29690537-29690585)
chr8 (106-154)||(45372704-45372752)
[»] chr5 (55 HSPs)
chr5 (3-148)||(20502085-20502230)
chr5 (3-155)||(29451891-29452042)
chr5 (4-155)||(5355550-5355701)
chr5 (2-155)||(7537018-7537171)
chr5 (9-155)||(29874315-29874461)
chr5 (16-154)||(38978753-38978891)
chr5 (9-143)||(9630245-9630379)
chr5 (16-154)||(29002741-29002879)
chr5 (2-155)||(33247290-33247442)
chr5 (18-139)||(35204937-35205057)
chr5 (18-139)||(35212102-35212222)
chr5 (16-155)||(24173418-24173557)
chr5 (16-155)||(32455139-32455276)
chr5 (4-147)||(27600758-27600900)
chr5 (9-139)||(33970671-33970801)
chr5 (4-154)||(13932460-13932610)
chr5 (3-157)||(73780-73934)
chr5 (22-148)||(13278903-13279029)
chr5 (3-155)||(29299355-29299508)
chr5 (91-154)||(8680627-8680690)
chr5 (1-103)||(19211276-19211378)
chr5 (4-136)||(38394427-38394559)
chr5 (4-148)||(1138223-1138366)
chr5 (1-145)||(35318522-35318666)
chr5 (103-154)||(30132886-30132937)
chr5 (22-155)||(13789730-13789863)
chr5 (80-136)||(4527722-4527778)
chr5 (104-155)||(73883-73934)
chr5 (4-135)||(15968310-15968440)
chr5 (3-154)||(22731258-22731408)
chr5 (104-154)||(13932460-13932510)
chr5 (22-136)||(22101925-22102039)
chr5 (9-155)||(27488351-27488496)
chr5 (2-44)||(29452001-29452043)
chr5 (79-156)||(33478181-33478258)
chr5 (22-70)||(8235460-8235508)
chr5 (4-52)||(38978843-38978891)
chr5 (79-154)||(10228141-10228216)
chr5 (20-70)||(892562-892612)
chr5 (81-158)||(29031032-29031109)
chr5 (81-154)||(1015155-1015228)
chr5 (22-67)||(3814057-3814102)
chr5 (79-148)||(5002145-5002214)
chr5 (3-52)||(7537122-7537171)
chr5 (1-70)||(8717786-8717855)
chr5 (4-148)||(11931968-11932113)
chr5 (2-95)||(14913164-14913257)
chr5 (79-136)||(18473549-18473606)
chr5 (114-155)||(19211278-19211319)
chr5 (11-44)||(27600867-27600900)
chr5 (1-46)||(30132838-30132883)
chr5 (114-155)||(30132840-30132881)
chr5 (20-68)||(5240237-5240285)
chr5 (4-52)||(8680642-8680690)
chr5 (4-52)||(29002741-29002789)
[»] chr4 (88 HSPs)
chr4 (3-148)||(54864062-54864207)
chr4 (2-154)||(36196364-36196516)
chr4 (2-155)||(33622878-33623031)
chr4 (3-148)||(43141771-43141916)
chr4 (2-154)||(37895254-37895406)
chr4 (3-154)||(32193474-32193625)
chr4 (3-142)||(35877312-35877451)
chr4 (9-155)||(43556689-43556836)
chr4 (9-154)||(4418101-4418246)
chr4 (8-147)||(50511251-50511390)
chr4 (16-154)||(52136698-52136836)
chr4 (10-154)||(25874704-25874849)
chr4 (2-155)||(35929007-35929159)
chr4 (4-146)||(8347498-8347641)
chr4 (4-155)||(33615778-33615929)
chr4 (3-155)||(29686398-29686550)
chr4 (10-148)||(42159978-42160116)
chr4 (3-154)||(25756711-25756862)
chr4 (3-148)||(27587251-27587396)
chr4 (4-144)||(31853066-31853206)
chr4 (10-143)||(54673315-54673448)
chr4 (16-139)||(52966409-52966532)
chr4 (16-153)||(56491072-56491209)
chr4 (10-148)||(19350617-19350753)
chr4 (19-129)||(52277989-52278101)
chr4 (1-139)||(9813468-9813608)
chr4 (21-109)||(50511471-50511559)
chr4 (20-155)||(28460761-28460896)
chr4 (40-139)||(40592726-40592825)
chr4 (70-155)||(38208314-38208399)
chr4 (82-148)||(1100901-1100967)
chr4 (54-155)||(1205131-1205232)
chr4 (4-148)||(4418102-4418246)
chr4 (4-97)||(24100758-24100851)
chr4 (22-155)||(30191913-30192046)
chr4 (71-148)||(50511393-50511470)
chr4 (2-154)||(48361049-48361201)
chr4 (19-120)||(1140879-1140980)
chr4 (90-147)||(7086216-7086273)
chr4 (1-157)||(22019930-22020085)
chr4 (22-155)||(36132633-36132766)
chr4 (22-155)||(44111743-44111876)
chr4 (79-148)||(48195964-48196033)
chr4 (106-146)||(52966496-52966536)
chr4 (8-107)||(23558952-23559051)
chr4 (104-155)||(25756811-25756862)
chr4 (3-70)||(53225727-53225794)
chr4 (22-136)||(8347662-8347776)
chr4 (104-150)||(54673313-54673359)
chr4 (1-45)||(1205190-1205234)
chr4 (4-155)||(36196364-36196515)
chr4 (4-155)||(37895254-37895405)
chr4 (22-70)||(45828498-45828546)
chr4 (3-135)||(55190685-55190816)
chr4 (22-136)||(4386153-4386267)
chr4 (1-52)||(19350608-19350659)
chr4 (19-88)||(22210803-22210872)
chr4 (15-68)||(24100889-24100942)
chr4 (79-136)||(32714286-32714343)
chr4 (22-155)||(47943744-47943877)
chr4 (106-155)||(54864062-54864111)
chr4 (106-154)||(8347593-8347641)
chr4 (22-136)||(21554126-21554239)
chr4 (106-154)||(42159972-42160020)
chr4 (22-70)||(43117937-43117985)
chr4 (4-143)||(52136698-52136837)
chr4 (10-140)||(23208647-23208777)
chr4 (4-51)||(25756711-25756758)
chr4 (114-157)||(35877310-35877353)
chr4 (22-136)||(3162912-3163026)
chr4 (4-70)||(16412233-16412299)
chr4 (81-155)||(20459239-20459313)
chr4 (2-155)||(29686397-29686550)
chr4 (2-44)||(43556688-43556730)
chr4 (90-155)||(13976850-13976915)
chr4 (3-52)||(22210877-22210926)
chr4 (22-123)||(42169073-42169174)
chr4 (81-154)||(47866111-47866184)
chr4 (97-142)||(50225316-50225361)
chr4 (100-140)||(22210871-22210911)
chr4 (4-52)||(25874801-25874849)
chr4 (2-46)||(27587243-27587287)
chr4 (4-52)||(32193474-32193522)
chr4 (90-154)||(33615778-33615842)
chr4 (12-52)||(35877415-35877455)
chr4 (3-155)||(42804254-42804405)
chr4 (2-70)||(47949022-47949090)
chr4 (16-52)||(54673411-54673447)
[»] chr3 (78 HSPs)
chr3 (3-142)||(45113745-45113884)
chr3 (4-155)||(27302077-27302228)
chr3 (14-148)||(43901590-43901724)
chr3 (3-155)||(31376173-31376325)
chr3 (16-148)||(53284327-53284459)
chr3 (1-155)||(53703726-53703881)
chr3 (2-154)||(39616910-39617062)
chr3 (11-134)||(21944295-21944418)
chr3 (4-145)||(16123756-16123896)
chr3 (16-154)||(48643603-48643741)
chr3 (3-135)||(19227326-19227458)
chr3 (4-144)||(24489322-24489461)
chr3 (2-141)||(50100206-50100346)
chr3 (10-154)||(50659948-50660081)
chr3 (3-148)||(44118188-44118333)
chr3 (14-144)||(36191483-36191616)
chr3 (40-148)||(2544493-2544602)
chr3 (19-148)||(19899626-19899756)
chr3 (79-155)||(25313276-25313352)
chr3 (11-95)||(46220372-46220456)
chr3 (46-155)||(8769175-8769283)
chr3 (4-155)||(48346448-48346599)
chr3 (46-155)||(8764273-8764381)
chr3 (13-127)||(45746479-45746593)
chr3 (79-157)||(51517031-51517109)
chr3 (106-155)||(53703728-53703777)
chr3 (13-120)||(51723386-51723493)
chr3 (104-154)||(2544436-2544486)
chr3 (106-155)||(19227409-19227458)
chr3 (106-155)||(31376276-31376325)
chr3 (106-155)||(39617012-39617061)
chr3 (16-155)||(42896140-42896279)
chr3 (13-136)||(44518044-44518167)
chr3 (23-85)||(44664200-44664262)
chr3 (2-154)||(21662883-21663035)
chr3 (15-154)||(12064908-12065047)
chr3 (106-142)||(36191485-36191521)
chr3 (4-155)||(45113733-45113884)
chr3 (4-59)||(2544436-2544491)
chr3 (40-107)||(6061117-6061184)
chr3 (4-135)||(49885378-49885508)
chr3 (2-49)||(53284420-53284467)
chr3 (4-155)||(53441905-53442056)
chr3 (26-132)||(19649600-19649706)
chr3 (22-136)||(43448975-43449089)
chr3 (22-136)||(52864968-52865082)
chr3 (203-297)||(8705946-8706044)
chr3 (203-297)||(9057833-9057931)
chr3 (82-155)||(12747774-12747847)
chr3 (1-70)||(12747780-12747849)
chr3 (106-147)||(21944295-21944336)
chr3 (4-69)||(25313625-25313690)
chr3 (3-68)||(27161439-27161504)
chr3 (22-95)||(29398512-29398584)
chr3 (10-154)||(48643609-48643753)
chr3 (114-155)||(50660047-50660088)
chr3 (103-155)||(8266329-8266381)
chr3 (40-144)||(27363170-27363274)
chr3 (1-52)||(4190621-4190672)
chr3 (79-146)||(13622494-13622561)
chr3 (104-155)||(28406566-28406617)
chr3 (1-52)||(31376171-31376222)
chr3 (105-144)||(44118283-44118322)
chr3 (22-136)||(23222975-23223088)
chr3 (90-144)||(42896227-42896281)
chr3 (79-136)||(9197098-9197155)
chr3 (104-157)||(14197801-14197854)
chr3 (115-148)||(16123762-16123795)
chr3 (19-68)||(24596972-24597021)
chr3 (105-154)||(25313641-25313690)
chr3 (78-155)||(27330036-27330113)
chr3 (91-136)||(43343532-43343577)
chr3 (16-52)||(25313289-25313325)
chr3 (2-70)||(28406464-28406532)
chr3 (79-155)||(28406465-28406541)
chr3 (3-67)||(28406553-28406617)
chr3 (4-136)||(36985155-36985287)
chr3 (4-136)||(37010594-37010726)
[»] chr6 (35 HSPs)
chr6 (2-154)||(30438740-30438892)
chr6 (2-155)||(28605568-28605721)
chr6 (9-155)||(12605608-12605754)
chr6 (10-148)||(12217495-12217635)
chr6 (19-148)||(10145220-10145349)
chr6 (19-148)||(8264986-8265115)
chr6 (3-155)||(2913331-2913483)
chr6 (19-147)||(9343134-9343262)
chr6 (16-129)||(359569-359682)
chr6 (14-155)||(12240111-12240250)
chr6 (41-154)||(23916163-23916276)
chr6 (15-105)||(3847456-3847546)
chr6 (16-122)||(29284529-29284635)
chr6 (4-67)||(17598110-17598173)
chr6 (22-156)||(3064900-3065034)
chr6 (22-136)||(17265738-17265852)
chr6 (4-154)||(33119903-33120051)
chr6 (2-68)||(2913418-2913484)
chr6 (22-136)||(30627840-30627954)
chr6 (65-155)||(17599513-17599605)
chr6 (107-143)||(359647-359683)
chr6 (8-52)||(8265073-8265117)
chr6 (4-44)||(12217489-12217529)
chr6 (48-136)||(12450394-12450482)
chr6 (40-148)||(26484290-26484397)
chr6 (104-155)||(2913331-2913382)
chr6 (9-44)||(10145219-10145254)
chr6 (2-44)||(12605607-12605649)
chr6 (80-142)||(24986007-24986069)
chr6 (33-143)||(33128853-33128963)
chr6 (15-52)||(12240201-12240238)
chr6 (79-136)||(28630827-28630884)
chr6 (79-136)||(30895258-30895315)
chr6 (24-97)||(33127842-33127915)
chr6 (4-52)||(23916228-23916276)
[»] chr1 (48 HSPs)
chr1 (4-155)||(52279232-52279383)
chr1 (13-155)||(27687839-27687981)
chr1 (19-148)||(45977099-45977228)
chr1 (3-155)||(51590428-51590580)
chr1 (19-155)||(48565541-48565677)
chr1 (16-143)||(31050261-31050388)
chr1 (35-136)||(29438168-29438269)
chr1 (19-155)||(13320301-13320437)
chr1 (2-148)||(15699461-15699607)
chr1 (1-147)||(19998407-19998553)
chr1 (9-155)||(13321718-13321864)
chr1 (42-155)||(13770746-13770859)
chr1 (18-147)||(44224283-44224411)
chr1 (35-156)||(34174883-34175004)
chr1 (9-154)||(22182764-22182909)
chr1 (16-155)||(18038699-18038838)
chr1 (16-142)||(20486668-20486794)
chr1 (3-148)||(44939071-44939216)
chr1 (2-155)||(29064145-29064301)
chr1 (26-88)||(32837657-32837719)
chr1 (58-148)||(52030873-52030963)
chr1 (3-78)||(25238648-25238723)
chr1 (2-136)||(26760190-26760324)
chr1 (2-155)||(26924210-26924363)
chr1 (79-148)||(37178984-37179053)
chr1 (106-155)||(51590428-51590477)
chr1 (4-155)||(38040274-38040425)
chr1 (1-148)||(43850954-43851103)
chr1 (23-136)||(34332494-34332607)
chr1 (22-70)||(34146887-34146935)
chr1 (11-154)||(519832-519975)
chr1 (16-154)||(31050249-31050387)
chr1 (9-52)||(52030872-52030915)
chr1 (22-136)||(640539-640652)
chr1 (79-145)||(5966949-5967015)
chr1 (90-143)||(18038698-18038751)
chr1 (104-153)||(22182864-22182913)
chr1 (106-155)||(25238674-25238723)
chr1 (22-155)||(26070841-26070974)
chr1 (11-52)||(34174892-34174933)
chr1 (1-70)||(50155381-50155450)
chr1 (4-66)||(29256685-29256747)
chr1 (40-97)||(12175507-12175564)
chr1 (90-155)||(15699462-15699527)
chr1 (114-155)||(19998409-19998450)
chr1 (3-52)||(19998512-19998561)
chr1 (22-70)||(28359005-28359053)
chr1 (38-70)||(47084643-47084675)
[»] scaffold0200 (2 HSPs)
scaffold0200 (3-148)||(25619-25765)
scaffold0200 (113-157)||(25723-25767)
[»] scaffold0059 (3 HSPs)
scaffold0059 (3-157)||(26582-26736)
scaffold0059 (90-156)||(26671-26737)
scaffold0059 (3-52)||(26584-26633)
[»] scaffold0767 (2 HSPs)
scaffold0767 (3-140)||(3807-3944)
scaffold0767 (104-155)||(3807-3858)
[»] scaffold0110 (3 HSPs)
scaffold0110 (2-154)||(40189-40342)
scaffold0110 (99-155)||(40285-40341)
scaffold0110 (22-69)||(1616-1663)
[»] scaffold0533 (2 HSPs)
scaffold0533 (16-142)||(3251-3377)
scaffold0533 (114-146)||(3349-3381)
[»] scaffold0023 (2 HSPs)
scaffold0023 (3-155)||(112821-112973)
scaffold0023 (114-155)||(112932-112973)
[»] scaffold0287 (2 HSPs)
scaffold0287 (16-147)||(12757-12888)
scaffold0287 (90-144)||(12755-12809)
[»] scaffold0176 (1 HSPs)
scaffold0176 (15-143)||(19307-19433)
[»] scaffold0460 (2 HSPs)
scaffold0460 (16-142)||(12224-12350)
scaffold0460 (16-142)||(7657-7783)
[»] scaffold0027 (1 HSPs)
scaffold0027 (13-129)||(5438-5554)
[»] scaffold0015 (1 HSPs)
scaffold0015 (4-101)||(17384-17481)
[»] scaffold0028 (1 HSPs)
scaffold0028 (3-118)||(71884-72000)
[»] scaffold0001 (1 HSPs)
scaffold0001 (22-154)||(156767-156899)
[»] scaffold0470 (1 HSPs)
scaffold0470 (22-68)||(5877-5923)
[»] scaffold0136 (1 HSPs)
scaffold0136 (79-136)||(16603-16660)


Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-118; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 313
Target Start/End: Original strand, 45076338 - 45076636
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45076338 aaatactccctccggtccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactagatacatcactt 45076437  T
Q  101 acacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtatcacgcaagtaaaaaccacttttcaggaatttgaatcatctcatct 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||          |    
T  45076438 acacaatgaaccaaaaaagtcaattgttttttataataaggaccggagagaatatcacgcaagtaaaacccacttttcaggaatttgaa----------t 45076527  T
Q  201 catctcatgctcattatatcttgttgttcatcctaccttaatctcaaccatttactaacctctctctcttctttattattattctttccttcatgtatca 300  Q
    | ||| ||||||||  | |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  45076528 cctcttatgctcat--tgtcttgttgttcatcctaccttaatctcaaccatttactaac--ctctctcttctttattattattctttccttcatgtatca 45076623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 36103544 - 36103392
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||    
T  36103544 aatactccctccggtccttattataagaaaaagttgattttttaggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcactta 36103445  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||||||| ||||| || |||||||| |||||||||||||||||| |||||    
T  36103444 cacaatgaactaaaaatgttaattgtttattataataaggaccggagggagta 36103392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 15239843 - 15239703
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| ||| |||||||| |||||||||| ||||||||||||    
T  15239843 aatactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatatatcttattgtaaatatagactagatacatcactta 15239744  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataagga 142  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  15239743 cacaatgaaccaacaaaatcaattgtttcttataataagga 15239703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 28143897 - 28143752
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||    
T  28143897 aaatactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattataaatatagactagatacatcactt 28143798  T
Q  101 acacaatgaaccaaaaaagtcaattgtttct--tataataaggacc 144  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||    
T  28143797 acacaatgaaccaaaaaaatcaattgtttctaatataataaggacc 28143752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 40534663 - 40534518
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| |||||||||||||| ||| |||| |||||||||||||||||||| |||||||| |||||||| |||||||||| |||||||| |||     
T  40534663 atactccctccggtccttattataagataaagttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcatttat 40534564  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||    
T  40534563 acaatgaactaaaaaaatcaattgtttcttataataaggaccggag 40534518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 25795388 - 25795243
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| ||||||||| |||||| |||||| ||||||| ||||| |||||||||||||||||  || || |||||||||| |||||| ||||||    
T  25795388 atactccctccggtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttac 25795289  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    || || |||| |||||||||||||||||||||||||||||||||||    
T  25795288 acgattaacctaaaaagtcaattgtttcttataataaggaccggag 25795243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 23464648 - 23464522
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgatt-ttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    ||||||||  ||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||| |||||||||| ||||||| |||    
T  23464648 aatacttcacccggtccttattataagaaaaagttgattattttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatctctt 23464549  T
Q  101 acacaatgaaccaaaaaagtcaattgt 127  Q
    | |||||||||||||||||| ||||||    
T  23464548 atacaatgaaccaaaaaagttaattgt 23464522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 27306719 - 27306843
Alignment:
Q  13 cgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaacc 112  Q
    ||||| ||||||||||||||| |||| ||||||||||||| ||||||||||||||| |||||||| |||||||||| ||||   ||||||||||| ||||    
T  27306719 cgatctttattataagaaaaagttgactttttaggttcattgaataattaatgtatcttattgtaaatatagactagatac--gacttacacaataaacc 27306816  T
Q  113 aaaaaagtcaattgtttcttataataa 139  Q
    |||||| ||||||||||||||||||||    
T  27306817 aaaaaaatcaattgtttcttataataa 27306843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 41464712 - 41464853
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||||| |||| || ||||||||| ||| ||||||||||||| |||||| ||||||||||||||| |  || || |||||||||| |||||||||||||    
T  41464712 atacttcatccggtctttattataaaaaacaattgattttttaagttcattgaataattaatgtatctcgttataaatatagactagatacatcacttac 41464811  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggacc 144  Q
    |||||||||| ||||| |||||| ||| |||||  |||||||    
T  41464812 acaatgaacctaaaaaatcaattattttttatagcaaggacc 41464853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 6971581 - 6971713
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||| |||||| ||||||  || || | ||||||||||||| || || || ||||||| || |||||||| |||||||||||||| ||    
T  6971581 tccttattataagaaacaattgactttttaaatttattgtataattaatgtatattgttataaatatagattagatacatcatttacacaatgaacctaa 6971680  T
Q  116 aaagtcaattgtttcttataataaggaccggag 148  Q
    |||||||| ||||||||||||||||||| ||||    
T  6971681 aaagtcaaatgtttcttataataaggacaggag 6971713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 3365413 - 3365284
Alignment:
Q  15 atccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaa 114  Q
    ||||||||||||||||| |||||||||||| | ||||| ||||||||||| ||| || || || ||||||| || |||||||||||| |||||||||| |    
T  3365413 atccttattataagaaataattgatttttttgattcattgaataattaatatatcttgttataaatatagattagatacatcacttatacaatgaaccta 3365314  T
Q  115 aaaagtcaattgtttcttataataaggacc 144  Q
    |||||| || | ||||||||||||| ||||    
T  3365313 aaaagttaaatttttcttataataaagacc 3365284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 9373528 - 9373404
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaa 118  Q
    ||||||||||||| |||||| ||||||  ||||| |||||||||| |||| || ||||| |||||||||| |||||||||||||| ||| |||  |||||    
T  9373528 ttattataagaaacaattgactttttaaattcattgaataattaacgtatcttgttgtaaatatagactacatacatcacttacataataaacttaaaaa 9373429  T
Q  119 gtcaattgtttcttataataaggac 143  Q
     ||||||||||||||||| ||||||    
T  9373428 ctcaattgtttcttataacaaggac 9373404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 27311726 - 27311590
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||||| | |||||| |||||||||||||| || || |||||||||| |||| || || || |||||||||| ||| |||| ||  |    
T  27311726 tactccctccggtccttatcacaagaaacaattgattttttagatttattgaataattaacgtatcttgttataaatatagactagatatatcatttgta 27311627  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataag 140  Q
    ||||||||| |||||||||||||||||||||||||||    
T  27311626 caatgaacctaaaaagtcaattgtttcttataataag 27311590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 38449090 - 38448940
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    |||||||||| ||| | |||||| ||||||| |||||| |||||||||||||  ||||||| ||| || || |  || |||||||  | |||||||||||    
T  38449090 aaatacttccaccggttcttattttaagaaacaattgactttttaggttcattaaataattgatgcatcttgtgataaatatagatcagatacatcactt 38448991  T
Q  101 acacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagaga 151  Q
    |||||||||||  |||||||||||||||| |||| |||||||||| |||||    
T  38448990 acacaatgaacataaaaagtcaattgttttttatgataaggaccgaagaga 38448940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 11687609 - 11687486
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaa 118  Q
    ||||||||||||| |||||| ||||||| || || ||||||||||| ||  |  || || |||||||||| |||||||||||||||||| ||   | |||    
T  11687609 ttattataagaaacaattgactttttagatttattgaataattaatataactcgttataaatatagactagatacatcacttacacaataaatttataaa 11687510  T
Q  119 gtcaattgtttcttataataagga 142  Q
    ||||||||||||||||||||||||    
T  11687509 gtcaattgtttcttataataagga 11687486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 41153261 - 41153128
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||||||||  |||||||||||| |||| ||||||| ||||| || ||||| ||||||||  ||    |||||||| |||||||||| |||     
T  41153261 atactccctccgatcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttat 41153162  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataa 136  Q
     ||||||| |||||||||||| ||||||||||||    
T  41153161 gcaatgaatcaaaaaagtcaaatgtttcttataa 41153128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 31853287 - 31853163
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttc-atagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    |||| |||| |||||||||||||| ||| |||||||||||||| ||| || ||||||||||||||||   || || ||||||||  |||| |||||||||    
T  31853287 tactccctcagatccttattataaaaaataattgattttttagattcaattgaataattaatgtattccgttataaatatagac--aatatatcacttac 31853190  T
Q  103 acaatgaaccaaaaaagtcaattgttt 129  Q
    |||||||||| ||| |||| |||||||    
T  31853189 acaatgaacctaaatagtcgattgttt 31853163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 154
Target Start/End: Original strand, 12962722 - 12962854
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||| ||||||| ||||| || ||||||||||| ||  |   | |||||||| |||||||||| |||  ||||||| ||||||||||    
T  12962722 ttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtataaaatatagaccaaatacatcatttatgcaatgaatcaaaaaagtc 12962821  T
Q  122 aattgtttcttataataaggaccggagagagta 154  Q
    || ||||||||||||  |||||| ||| |||||    
T  12962822 aaatgtttcttataaataggaccagagggagta 12962854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 25795234 - 25795388
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttat-tgtacatatagactaaatacatcact 99  Q
    ||||||| |||||| |||||||||||||||| |||||| |||||||||| || |  ||| |||||||| |  | | ||  |||| || |||||||| | |    
T  25795234 aaatactacctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttata-acgaaatacattaat 25795332  T
Q  100 tacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||  ||||||| | ||||||||||||||||||| ||||||||||||||| ||||||    
T  25795333 tattcaatgaatctaaaaagtcaattgtttcttgtaataaggaccggagggagtat 25795388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 311
Target Start/End: Complemental strand, 31858373 - 31858296
Alignment:
Q  236 ccttaatctcaaccatttactaacctct--ctctcttctttattattattctttccttcatgtatcaatcaatagtta 311  Q
    |||||||||||||||| ||||||| | |  |||||||||||||||||||| || ||||||||||||||||||| ||||    
T  31858373 ccttaatctcaaccatctactaacttttttctctcttctttattattatttttgccttcatgtatcaatcaattgtta 31858296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 136
Target Start/End: Original strand, 12873721 - 12873854
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||||||||| |||||||||||| |||| ||||||| |||||  | ||||||||||||||  |     ||||||||||||||||||| |||     
T  12873721 atactccctccgatcctttttataagaaaaagttgactttttagattcattaagtaattaatgtatttggtatagaatatagactaaatacatcatttat 12873820  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataa 136  Q
     ||||||| ||| |||||||| | ||| ||||||    
T  12873821 gcaatgaatcaataaagtcaaatattttttataa 12873854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 21424975 - 21424911
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggac 143  Q
    ||||| |||||||| | || |||||||||||| | ||||||| ||||||||||||||||||||||    
T  21424975 atataaactaaatataacagttacacaatgaaactaaaaagtaaattgtttcttataataaggac 21424911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 14329223 - 14329270
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataat 137  Q
    ||||||||||||||||||||||| || ||||||||||| |||||||||    
T  14329223 atacatcacttacacaatgaacctaacaagtcaattgtctcttataat 14329270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 28249064 - 28248950
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||| ||||||| |||||  ||||||||||||||||  |     ||||||||||||||||| | |||  |||| || ||||||||||    
T  28249064 ttataagaaaaagttgactttttagattcattaaataattaatgtatttggtatagaatatagactaaatacattatttatgcaattaatcaaaaaagtc 28248965  T
Q  122 aattgtttcttataa 136  Q
    || | ||||||||||    
T  28248964 aaatatttcttataa 28248950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 32457344 - 32457230
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||| ||||||| |||||  | ||||| |||||| || |     ||||||||||||||||||| |||  ||||||| ||||||||||    
T  32457344 ttataagaaaaatttgactttttagattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatcaaaaaagtc 32457245  T
Q  122 aattgtttcttataa 136  Q
    || | ||||||||||    
T  32457244 aaatatttcttataa 32457230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 4063289 - 4063421
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| || ||||||||| |||||  ||||||| |||||  | | | || | |||||| ||||||||||  ||  ||||||| |||||||||     
T  4063289 ttataagaaaaagttaattttttagattcattcaataattgatgtacct-actctagaaatagacaaaatacatcaactattcaatgaatcaaaaaagta 4063387  T
Q  122 aattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||   |||||||||| ||||||    
T  4063388 aattgtttcttatatataggaccggagggagtat 4063421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 9152456 - 9152529
Alignment:
Q  82 tagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| |||||||| |||| ||||||| | ||||||||||||||||||| |||  | |||||||| ||||||    
T  9152456 tagactagatacatcaattactcaatgaatctaaaaagtcaattgtttcttgtaaataagaccggagggagtat 9152529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 10205000 - 10205057
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    ||||||||||||||||||| ||| |||||||| ||||| |||||| | ||||||||||    
T  10205000 atatagactaaatacatcatttatacaatgaatcaaaagagtcaaatatttcttataa 10205057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 11030323 - 11030210
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    ||||||||||||||| | ||||||| ||||| || ||||| |||||| | ||     |||||||| |||||||||| |||   |||||| ||||||||||    
T  11030323 ttataagaaaaaattaactttttagattcattgagtaattgatgtatctgatatagaatatagaccaaatacatcatttatgtaatgaatcaaaaaagtc 11030224  T
Q  122 aattgtttcttata 135  Q
    || |||||||||||    
T  11030223 aaatgtttcttata 11030210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 11794466 - 11794511
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgta 67  Q
    ||||||||||||||||||||||||| || || ||||||||||||||    
T  11794466 ttataagaaaaaattgattttttagatttattgaataattaatgta 11794511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 12486066 - 12486143
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtatc 156  Q
    |||||||| |||||||||| |||  ||||||| | ||||||||||||||||||| |||  |||||| ||| |||||||    
T  12486066 atatagaccaaatacatcaattattcaatgaatctaaaaagtcaattgtttcttgtaaataggaccagagggagtatc 12486143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 15239690 - 15239739
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||||||||| |||||||||||||||||| |||||||||| | |||||||    
T  15239690 atacttcctctgatccttattataagaaacaattgattttgttggttcat 15239739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 15239793 - 15239842
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| |||||||||| | |||||||||||||||||||||| ||||||    
T  15239793 atgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 15239842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 28143846 - 28143895
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| |||||||||| | |||||||||||||||||||||| ||||||    
T  28143846 atgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 28143895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 29988909 - 29989042
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||| |||||||||||||||||  ||||| |  |||||||| |||||| |     |||||||  |||||||||| |||  ||||||| ||||||||||    
T  29988909 ttataaaaaaaaattgattttttatattcattgtgtaattaatatattttgtctagaatatagatcaaatacatcatttatgcaatgaatcaaaaaagtc 29989008  T
Q  122 aattgtttcttataataaggaccggagagagtat 155  Q
    || |||||||| |||  ||||| |||| ||||||    
T  29989009 aaatgtttcttctaaataggactggagggagtat 29989042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 44283672 - 44283623
Alignment:
Q  14 gatccttattataagaaaaaattgattttttaggttcatagaataattaa 63  Q
    |||||||||||||||||| |||||| ||||||| ||||| ||||||||||    
T  44283672 gatccttattataagaaataattgactttttagattcattgaataattaa 44283623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 45076389 - 45076340
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||| |||||| |||||||||||||||||||||| ||||||    
T  45076389 atgaacctaaaaaatcaattttttcttataataaggaccggagggagtat 45076340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 146
Target Start/End: Complemental strand, 6971535 - 6971503
Alignment:
Q  114 aaaaagtcaattgtttcttataataaggaccgg 146  Q
    |||||||||||||||||||||||||||||||||    
T  6971535 aaaaagtcaattgtttcttataataaggaccgg 6971503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 34819878 - 34819838
Alignment:
Q  263 tctctcttctttattattattctttccttcatgtatcaatc 303  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  34819878 tctctcttctttattattattctttctttcatatatcaatc 34819838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 154
Target Start/End: Complemental strand, 38983130 - 38982998
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||| ||||| |||||||||||| ||||| |  ||||| |||||| || |     |||||||| |||||||||| |||  ||||||| ||||||||||    
T  38983130 ttataaaaaaaagttgattttttagattcattgtgtaattgatgtatcttgtctagaatatagacaaaatacatcatttatgcaatgaatcaaaaaagtc 38983031  T
Q  122 aattgtttcttataataaggaccggagagagta 154  Q
    || | ||| ||||||  |||||||||| |||||    
T  38983030 aaatattttttataaataggaccggagggagta 38982998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 4755474 - 4755525
Alignment:
Q  17 ccttattataagaaaaaattgattttttaggttcatagaataattaatgtat 68  Q
    ||||||||||||||| |||| ||||||||| |||||  ||||||||||||||    
T  4755474 ccttattataagaaacaattaattttttagattcattaaataattaatgtat 4755525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 11724321 - 11724408
Alignment:
Q  56 ataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc-aattgtttcttataataagga 142  Q
    ||||||||||||| |  || || |||||||||| ||| || ||||||||||| || | | |||||| |||||||||||||||||||||    
T  11724321 ataattaatgtatctcgttataaatatagactagatatattacttacacaataaatctataaagtctaattgtttcttataataagga 11724408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 30761452 - 30761527
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||||||||||||||   ||   ||||||| |||||||||||| ||||||||||||  |||||||||| |||||    
T  30761452 atatagactaaatacatattttgtgcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagta 30761527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 155
Target Start/End: Original strand, 40534517 - 40534663
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaa-atacatcacttacacaat 107  Q
    |||||| |||||||||||||||| ||||||||||||  |||||| | |||| | |||||| | | | || || || | ||| |||||| | |||  | ||    
T  40534517 cctccggtccttattataagaaacaattgatttttttagttcattgtataaatgatgtatct-agtctatatttacaataagatacattatttattctat 40534615  T
Q  108 gaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||| |||||||||| | | |||||||||||||||||||| ||||||    
T  40534616 gaacctaaaaagtcaactttatcttataataaggaccggagggagtat 40534663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 44460654 - 44460603
Alignment:
Q  23 tataagaaaaaattgattttttaggttcatagaataattaatgtattttatt 74  Q
    |||||||||| ||| ||||||||||||||| |||||| ||||||||| ||||    
T  44460654 tataagaaaatatttattttttaggttcattgaataaataatgtattatatt 44460603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45571029 - 45571179
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  ||||||||||||||| | ||||||| |||||  ||||||| |||||  | |   || | |||||| ||||||||||  ||      
T  45571029 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacct-agcctagaaatagaccaaatacatcaactatt 45571127  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  45571128 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 45571179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45574696 - 45574846
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  ||||||||||||||| | ||||||| |||||  ||||||| |||||  | |   || | |||||| ||||||||||  ||      
T  45574696 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacct-agcctagaaatagaccaaatacatcaactatt 45574794  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  45574795 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 45574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45578363 - 45578513
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  ||||||||||||||| | ||||||| |||||  ||||||| |||||  | |   || | |||||| ||||||||||  ||      
T  45578363 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacct-agcctagaaatagaccaaatacatcaactatt 45578461  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  45578462 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 45578513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45582030 - 45582180
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  ||||||||||||||| | ||||||| |||||  ||||||| |||||  | |   || | |||||| ||||||||||  ||      
T  45582030 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacct-agcctagaaatagaccaaatacatcaactatt 45582128  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  45582129 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 45582180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45585697 - 45585847
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  ||||||||||||||| | ||||||| |||||  ||||||| |||||  | |   || | |||||| ||||||||||  ||      
T  45585697 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacct-agcctagaaatagaccaaatacatcaactatt 45585795  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  45585796 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 45585847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45589364 - 45589514
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  ||||||||||||||| | ||||||| |||||  ||||||| |||||  | |   || | |||||| ||||||||||  ||      
T  45589364 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacct-agcctagaaatagaccaaatacatcaactatt 45589462  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  45589463 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 45589514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45593031 - 45593181
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  ||||||||||||||| | ||||||| |||||  ||||||| |||||  | |   || | |||||| ||||||||||  ||      
T  45593031 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacct-agcctagaaatagaccaaatacatcaactatt 45593129  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  45593130 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 45593181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45596698 - 45596848
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  ||||||||||||||| | ||||||| |||||  ||||||| |||||  | |   || | |||||| ||||||||||  ||      
T  45596698 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacct-agcctagaaatagaccaaatacatcaactatt 45596796  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  45596797 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 45596848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45600365 - 45600515
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  ||||||||||||||| | ||||||| |||||  ||||||| |||||  | |   || | |||||| ||||||||||  ||      
T  45600365 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacct-agcctagaaatagaccaaatacatcaactatt 45600463  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  45600464 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 45600515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45604032 - 45604182
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  ||||||||||||||| | ||||||| |||||  ||||||| |||||  | |   || | |||||| ||||||||||  ||      
T  45604032 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacct-agcctagaaatagaccaaatacatcaactatt 45604130  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  45604131 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 45604182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45607699 - 45607849
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  ||||||||||||||| | ||||||| |||||  ||||||| |||||  | |   || | |||||| ||||||||||  ||      
T  45607699 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacct-agcctagaaatagaccaaatacatcaactatt 45607797  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  45607798 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 45607849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45611366 - 45611516
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  ||||||||||||||| | ||||||| |||||  ||||||| |||||  | |   || | |||||| ||||||||||  ||      
T  45611366 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacct-agcctagaaatagaccaaatacatcaactatt 45611464  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  45611465 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 45611516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45615033 - 45615183
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  ||||||||||||||| | ||||||| |||||  ||||||| |||||  | |   || | |||||| ||||||||||  ||      
T  45615033 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacct-agcctagaaatagaccaaatacatcaactatt 45615131  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  45615132 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 45615183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 144
Target Start/End: Complemental strand, 6971609 - 6971579
Alignment:
Q  114 aaaaagtcaattgtttcttataataaggacc 144  Q
    |||||||||||||||||||||||||||||||    
T  6971609 aaaaagtcaattgtttcttataataaggacc 6971579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 2936367 - 2936424
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    |||||||||||||| ||||  ||  ||||||| |||||||||||| ||||||||||||    
T  2936367 atatagactaaatatatcatctatccaatgaatcaaaaaagtcaaatgtttcttataa 2936424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 155
Target Start/End: Complemental strand, 9152506 - 9152377
Alignment:
Q  26 aagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaatt 125  Q
    |||||| |||||| ||||||| ||||| || ||||| |||||| |  |   | |||||||| |||||||||| |||   |||||  |||||||||||| |    
T  9152506 aagaaacaattgactttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattatttaatgactcaaaaaagtcaaat 9152407  T
Q  126 gtttcttataataaggaccggagagagtat 155  Q
    ||||||| |||  |||||||||| ||||||    
T  9152406 gtttcttgtaaataggaccggagggagtat 9152377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 34447634 - 34447510
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||||||||||| ||||| |  |||| ||||||| || |   | ||||| || |||||||| | |||  |||||||| |||||||||    
T  34447634 ttataagaaaaagttgattttttagattcattgtgtaatcaatgtatcttgtctaaaatataaaccaaatacattatttatgcaatgaactaaaaaagtc 34447535  T
Q  122 aattgtttcttataataaggaccgga 147  Q
    || | ||||||||||  |||||||||    
T  34447534 aaat-tttcttataaataggaccgga 34447510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 36103494 - 36103543
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||| |||| | |||||||||||||||||||||| ||||||    
T  36103494 atgaacctaaaaaatcaactttttcttataataaggaccggagggagtat 36103543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 38449038 - 38449079
Alignment:
Q  105 aatgaaccaaaaaagtcaattgtttcttataataaggaccgg 146  Q
    |||||||| |||||||||||||||||||| |||||| |||||    
T  38449038 aatgaacctaaaaagtcaattgtttcttaaaataagaaccgg 38449079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 41824272 - 41824404
Alignment:
Q  20 tattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaag 119  Q
    ||||||||| ||||||| ||||||||| |||||  ||||| | |||||| |  || || |||||||| | |||||||| |||   |||||||| ||||||    
T  41824272 tattataagcaaaaattcattttttagattcattcaataaattatgtatgtagtt-tatatatagaccacatacatcatttattgaatgaacctaaaaag 41824370  T
Q  120 tcaattgtttcttataataaggaccggagagagt 153  Q
    |||||| || |||||| ||  |||||||| ||||    
T  41824371 tcaatttttacttatagtagtgaccggagggagt 41824404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 43714048 - 43713991
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    |||||||| |||||||| | |||  ||||||| ||||||| |||||||||||||||||    
T  43714048 atatagaccaaatacataatttattcaatgaatcaaaaaaatcaattgtttcttataa 43713991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 45034473 - 45034546
Alignment:
Q  81 atagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||| ||||||||||  ||  ||||||| ||||||||| ||||||||||||||   |||||||||| |||||    
T  45034473 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 45034546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 6971719 - 6971671
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    ||||||||||  |||||||||||||||| | |||| |||||||||||||    
T  6971719 tacttcctcctgtccttattataagaaacatttgactttttaggttcat 6971671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 27311576 - 27311624
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||| |||| ||| |||||||||||||| |||||| |||||||||||||    
T  27311576 tactccctcggattcttattataagaaacaattgactttttaggttcat 27311624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 373
Target Start/End: Original strand, 45076672 - 45076704
Alignment:
Q  341 aactaaacgaaaaggagtttgagagaatccaca 373  Q
    ||||||||||||||||||||||||| |||||||    
T  45076672 aactaaacgaaaaggagtttgagaggatccaca 45076704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 4e-60; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 41487788 - 41487941
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  41487788 aatactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcactta 41487887  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  41487888 cacaatgaaccaaaaaaatcaattgtttcttataataaggaccggagggagtat 41487941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 22618169 - 22618313
Alignment:
Q  11 tccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaa 110  Q
    |||| ||||||||||||||||   |||||||||||| ||||| || |||||||||||| || ||||| |||||||||| |||||||||||||||||||||    
T  22618169 tccgttccttattataagaaatttttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttacacaatgaa 22618268  T
Q  111 ccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    || ||||||||||||||||||||||||||||||||||| ||||||    
T  22618269 cctaaaaagtcaattgtttcttataataaggaccggagtgagtat 22618313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 47484171 - 47484027
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||  ||||||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  47484171 atactccctcctgtccttattataagtaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttac 47484072  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccgga 147  Q
     |||||||  |||||| ||||||||||||||||||||||||||||    
T  47484071 gcaatgaataaaaaaaatcaattgtttcttataataaggaccgga 47484027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 9 - 155
Target Start/End: Original strand, 24164520 - 24164666
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatg 108  Q
    |||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||| || ||  | |||||||||| |||||||||||||| ||||    
T  24164520 cctccggtccttattataagaaacaattgatttttttggttcatagaataattaatgtatcttgttagaaatatagactagatacatcacttacataatg 24164619  T
Q  109 aaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||| |||||||||| |||||||||||||||||| ||||| ||||||    
T  24164620 aacctaaaaagtcaaatgtttcttataataaggatcggagggagtat 24164666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 40198603 - 40198744
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| || || ||||| |||||||||||||||||| ||||||    
T  40198603 tactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgcatcttgttgtaaatatagactaaatacatcgcttaca 40198702  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccg 145  Q
     ||| ||| |||||||||| |||||||||||||| |||||||    
T  40198703 taataaactaaaaaagtcatttgtttcttataattaggaccg 40198744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 37006608 - 37006454
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaa-ttgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    |||||||| |||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||  ||||||| ||||| |||  |||||||||||    
T  37006608 aatacttcatccggtccttattataagaaaaaaattgactttttaagttcatagaataattaatgtatcatattgtaaatataaactggatacatcactt 37006509  T
Q  101 acacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    | ||||| ||| ||||||||||||||||||||||||||| |||| || |||||||    
T  37006508 atacaataaactaaaaaagtcaattgtttcttataataacgacccgatagagtat 37006454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 41395814 - 41395668
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    ||||||||||| || | |||||||||||||||| |||| ||||||| ||||||||||||||||| ||| ||||| || |||||||||| |||||||||||    
T  41395814 aaatacttccttcggttcttattataagaaaaagttgactttttagattcatagaataattaatatatcttattataaatatagactagatacatcactt 41395715  T
Q  101 acacaatgaaccaaaaaagtcaattgtttcttataataaggaccgga 147  Q
    | ||||||||  |||||||| ||||||||||||||||||||| ||||    
T  41395714 atacaatgaattaaaaaagttaattgtttcttataataaggatcgga 41395668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 45025599 - 45025737
Alignment:
Q  10 ctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatga 109  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||| || || || |||||||||| |||||||||||||| |||||    
T  45025599 ctccggtccttattataagaaacaattgatttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacataatga 45025698  T
Q  110 accaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    | | ||||| |||| ||||||||||||||| ||||||||    
T  45025699 atctaaaaaatcaaatgtttcttataataaagaccggag 45025737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 41088851 - 41088995
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||||||| |||||| |||||| ||||||| ||||| |||||||||||||||||  || || |||||||||| |||||| |||||||    
T  41088851 tactccctccggtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttaca 41088950  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    | || |||| |||||||||||||||||||||||||||||||||||    
T  41088951 cgattaacctaaaaagtcaattgtttcttataataaggaccggag 41088995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 18064721 - 18064864
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| |||||| ||||||||||| || | |||||| |||||||||||||||||||||| |||||| | |||||||||| |||||||||||| |    
T  18064721 tactccctccggtccttaatataagaaaaagttaactttttaagttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttaaa 18064820  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccgga 147  Q
    |||||||| ||||| ||||| ||||||||||| |||||||||||    
T  18064821 caatgaactaaaaatgtcaactgtttcttatattaaggaccgga 18064864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 27320305 - 27320444
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||||| |||| |||||| ||||||| ||||||| || ||| |||||||| |||||||||| | |||| ||||| |||||||||||||    
T  27320305 tccttattataagaaaaagttgactttttaagttcataaaataattgatatatcttattgtaaatatagactagaaacattacttatacaatgaaccaaa 27320404  T
Q  116 aaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||| ||||||||||||||||||||||||| ||| ||||||    
T  27320405 aaaatcaattgtttcttataataaggaccagagggagtat 27320444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 29559574 - 29559442
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    ||||||||| |||||| |||||| ||||||| ||||| |||||||||||||||||  || || |||||||||| |||||| |||||||| ||||||| ||    
T  29559574 tccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttacacgatgaacctaa 29559475  T
Q  116 aaagtcaattgtttcttataataaggaccggag 148  Q
    ||||||||||||||||||||||||||| |||||    
T  29559474 aaagtcaattgtttcttataataaggatcggag 29559442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 47280309 - 47280173
Alignment:
Q  19 ttattataagaaaaaa--ttgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaa 116  Q
    ||||||||| ||||||  |||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| | ||| |||||||| |||||    
T  47280309 ttattataaaaaaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactaaatacattatttatacaatgaa-caaaa 47280211  T
Q  117 aagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||| |||||||||||||||||| || ||||| |||||    
T  47280210 aagttaattgtttcttataataaagatcggagggagta 47280173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 10674122 - 10674275
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| | |||||||||| ||| | |||| ||||||||||||| ||||||||||||||| || || || ||||||| || ||||||||||||||    
T  10674122 tactccctccggtacttattataaaaaacatttgactttttaggttcattgaataattaatgtatcttgttataaatatagattagatacatcacttaca 10674221  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtatca 157  Q
     |||||| | ||||||||||||||||||||||||||||| ||||| || |||||    
T  10674222 taatgaatctaaaaagtcaattgtttcttataataaggatcggagggaatatca 10674275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 33901049 - 33901181
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||| |||||||||||| | ||||||||||| ||||||||| || || || |||||||||| |||||||| ||||| |||||| | ||    
T  33901049 tccttattataagaaacaattgatttttttgattcatagaatagttaatgtatcttgttataaatatagactagatacatcatttacataatgaatctaa 33901148  T
Q  116 aaagtcaattgtttcttataataaggaccggag 148  Q
    |||||||| ||||||||||||||| ||||||||    
T  33901149 aaagtcaaatgtttcttataataaagaccggag 33901181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 12806905 - 12807008
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| |||||||||||||||||| |||| |||||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||||||    
T  12806905 aatactccctccggtccttattataagaaaaagttgactttttaggttcataaaataattaatgtatcttattgtaaatatagactacatacatcactta 12807004  T
Q  102 caca 105  Q
    ||||    
T  12807005 caca 12807008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 47612289 - 47612440
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| |||||||||| || || || ||| ||||||||||||| ||||||||||||||| |  || || |||||||||| |||||| ||||| |    
T  47612289 tactccctccggtccttattattagcaacaaatgactttttaggttcattgaataattaatgtatctcgttataaatatagactagatacattacttata 47612388  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||| ||||||||||||| | ||||||||||||||||||| ||||||    
T  47612389 caatgaacctaaaaagtcaattgctgcttataataaggaccggagggagtat 47612440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 45123249 - 45123379
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatg 108  Q
    |||||| |||||| ||||| ||||| |||| ||||||  ||||||||||||||||||||| ||||| || ||||||| || |||||||||||| ||||||    
T  45123249 cctccggtccttactataaaaaaaagttgactttttaaattcatagaataattaatgtatcttattataaatatagattagatacatcacttatacaatg 45123348  T
Q  109 aaccaaaaaagtcaattgtttcttataataa 139  Q
    || ||||||||| |||| |||||||||||||    
T  45123349 aatcaaaaaagttaattatttcttataataa 45123379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 13860361 - 13860229
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatg 108  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||| | ||||||||||||| || || || |||||||||| |||||||| |||||||||     
T  13860361 cctccgatccttattataagaaacaattgactttttagattcattgtataattaatgtatattgttataaatatagactagatacatca-ttacacaata 13860263  T
Q  109 aaccaaaaaagtcaattgtttcttataataagga 142  Q
    |||  ||||||| || ||||||||||||||||||    
T  13860262 aacttaaaaagtaaaatgtttcttataataagga 13860229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 24932381 - 24932518
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||              |||||| |||||||||||||||     
T  24932381 atacttccttcggtccttattataagaaaaaattgactttttaggttcatagaataattaatg--------------tatagattaaatacatcacttat 24932466  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||||||| |||||||| |||||| |||||||||||||| ||||| |||||    
T  24932467 acaatgaactaaaaaagttaattgtctcttataataaggatcggagggagta 24932518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 31903088 - 31902963
Alignment:
Q  15 atccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaa 114  Q
    ||||||||||||| ||| |||| ||||||||||||||| |||||||||||||||||  |  || |||||||||| |||||||| ||||| ||| |||  |    
T  31903088 atccttattataaaaaataattaattttttaggttcattgaataattaatgtatttcgtcataaatatagactagatacatcatttacataataaactta 31902989  T
Q  115 aaaagtcaattgtttcttataataag 140  Q
    |||||||| |||||||||||||||||    
T  31902988 aaaagtcagttgtttcttataataag 31902963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 33039699 - 33039572
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcata--gaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaacca 113  Q
    |||||||| |||| || |||||| |||||||||| |||  |||||||||||||||  | ||||| |||||||||| ||||||| || ||||||||||||     
T  33039699 tccttattttaaggaacaattgactttttaggtttatatagaataattaatgtatcatgttgtaaatatagactagatacatccctaacacaatgaacct 33039600  T
Q  114 aaaaagtcaattgtttcttataataagg 141  Q
    ||||||||||||||||||| ||||||||    
T  33039599 aaaaagtcaattgtttcttttaataagg 33039572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 40234871 - 40234765
Alignment:
Q  48 ttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccgga 147  Q
    ||||| || ||||| |||||| || ||||| |||||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  40234871 ttcattgagtaattcatgtatcttgttgtaaatatagactagatacatcagttacacaatgaatctaaaaagtcaattgtttcttataataagaaccgga 40234772  T
Q  148 gagagta 154  Q
    | |||||    
T  40234771 gggagta 40234765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 35 - 148
Target Start/End: Complemental strand, 7456537 - 7456424
Alignment:
Q  35 ttgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttat 134  Q
    |||| ||||||| ||||| || |||||||||||| || ||||| |||||||||| |||||||| ||| |||||||| | |||||||||| | ||||||||    
T  7456537 ttgactttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcatttatacaatgaatctaaaaagtcaaatatttcttat 7456438  T
Q  135 aataaggaccggag 148  Q
    ||||||||||||||    
T  7456437 aataaggaccggag 7456424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 3633328 - 3633197
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||| | |||| ||||||||||||| |  ||| | |||||| |  || || || ||||||| |||||||||||| | |||||||| ||    
T  3633328 tccttattataagaaatatttgactttttaggttcattgtttaagtgatgtatctcgttataaatgtagactagatacatcacttaaataatgaacctaa 3633229  T
Q  116 aaagtcaattgtttcttataataaggaccgga 147  Q
    |||||||| |||||||||||||||||||||||    
T  3633228 aaagtcaaatgtttcttataataaggaccgga 3633197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 14543282 - 14543405
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaa 118  Q
    |||||||||||||   |||||||||||| ||||| || |||||||||||| ||  |||| |||||||||| |||||||||||||| ||| |||  ||| |    
T  14543282 ttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgatgtaaatatagactagatacatcacttacataataaacttaaaca 14543381  T
Q  119 gtcaattgtttcttataataagga 142  Q
     |||||||||||||||||||||||    
T  14543382 atcaattgtttcttataataagga 14543405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 28248442 - 28248578
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacac----aatgaac 111  Q
    |||||||||||||||| ||||||  |||||| ||||| |||||||||||| || |  || || |||||||||| |||||||||||||||    |||||||    
T  28248442 tccttattataagaaacaattgacattttagattcattgaataattaatgcatctcgttataaatatagactatatacatcacttacacaattaatgaac 28248541  T
Q  112 caaaaaagtcaattgtttcttataataaggaccggag 148  Q
    | ||||||| ||||||||||| |||||| ||||||||    
T  28248542 ctaaaaagttaattgtttcttgtaataatgaccggag 28248578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 28677466 - 28677315
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||||||||  ||||||||||||||||| ||||||| || || || ||||| |||||| || |     |||||||| |||||||||| |||      
T  28677466 tactccctccgatcctatttataagaaaaaattgactttttagatttattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatg 28677367  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||| ||||||    
T  28677366 caatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtat 28677315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 36245507 - 36245374
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    ||||||||||||||||| ||||||| ||||| || ||||| |||||| || |     |||||||| |||||||||| |||  ||||||| ||||||||||    
T  36245507 ttataagaaaaaattgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaagtc 36245408  T
Q  122 aattgtttcttataataaggaccggagagagtat 155  Q
    || ||||||||||||  |||||||||| ||||||    
T  36245407 aaatgtttcttataaacaggaccggagggagtat 36245374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 41850613 - 41850738
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| || ||||||||| ||||| |||||||||||||||||  |   | |||||||  |||||||||| |||  ||||||| |||||||||     
T  41850613 ttataagaaaaagttaattttttagattcattgaataattaatgtatttggtataaaatatagagcaaatacatcatttatgcaatgaatcaaaaaagta 41850712  T
Q  122 aattgtttcttataataaggaccgga 147  Q
    || ||||||||||||  |||||||||    
T  41850713 aaatgtttcttataaataggaccgga 41850738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 39413852 - 39413966
Alignment:
Q  29 aaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtt 128  Q
    |||| ||||| ||||||  || || |||||||||||||||  | ||||| |||| || || |||||||||||| |||||||||  ||||| |||||||||    
T  39413852 aaaatattgactttttatattaattgaataattaatgtatcatgttgtaaatattgattagatacatcacttatacaatgaacttaaaaaatcaattgtt 39413951  T
Q  129 tcttataataaggac 143  Q
    ||||||||| |||||    
T  39413952 tcttataattaggac 39413966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 29559436 - 29559576
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatata-gactaaatacatcacttac 102  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||||||| |  ||| ||||||| | || | || || ||  || |||||||| | |||     
T  29559436 tactacctccgatccttattataagaaacaattgactttttaggttcatcgtgtaagtaatgta-tctagtctatatttataacgaaatacattaattat 29559534  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggacc 144  Q
     ||||||| | ||||||||||||||||||| |||||||||||    
T  29559535 tcaatgaatctaaaaagtcaattgtttcttgtaataaggacc 29559576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 40599998 - 40600063
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||||||| || |||| |||||||    
T  40599998 atacatcacttacacaatgaacctaaaaagttaattgttgcttataataaagatcggaaagagtat 40600063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 45025641 - 45025592
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  45025641 atgaaccaaaaaaatcaattgtttcttataataaggaccggagtgagtat 45025592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 39153411 - 39153304
Alignment:
Q  29 aaaaaattgattttttaggttcatagaataattaatgtattttat-tgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgt 127  Q
    |||||||||| ||||||| ||||| || ||||| ||||||||  | | || ||||||||||||||||||| |||  ||||||| |||||||||||| |||    
T  39153411 aaaaaattgactttttagcttcattgagtaattgatgtatttggtctata-atatagactaaatacatcatttatgcaatgaatcaaaaaagtcaaatgt 39153313  T
Q  128 ttcttataa 136  Q
    |||||||||    
T  39153312 ttcttataa 39153304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 7999568 - 7999489
Alignment:
Q  33 aattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaacc 112  Q
    |||||| |||||||||||||  ||||||||||| || |  || || |||||||||| |||||||||||||||||||||||    
T  7999568 aattgactttttaggttcattaaataattaatgcatctcgttataaatatagactagatacatcacttacacaatgaacc 7999489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 3633276 - 3633330
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggacc 144  Q
    |||||||||||| |||||||||| |||||||||| | ||||||||||||||||||    
T  3633276 atacatcacttaaacaatgaacctaaaaagtcaaatatttcttataataaggacc 3633330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 24164563 - 24164521
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  24164563 atgaaccaaaaaaatcaattgtttcttataataaggaccggag 24164521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 129
Target Start/End: Complemental strand, 40142903 - 40142797
Alignment:
Q  23 tataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtca 122  Q
    |||||||||||||||||||||||| || || | ||||||||||||| || ||    |||||||| |||||||| | |||  ||||||| |||||||||||    
T  40142903 tataagaaaaaattgattttttagatttattgtataattaatgtatcttgtttaggatatagaccaaatacattatttatgcaatgaatcaaaaaagtca 40142804  T
Q  123 attgttt 129  Q
    | |||||    
T  40142803 aatgttt 40142797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 41088996 - 41088851
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttat-tgtacatatagactaaatacatcacttacacaat 107  Q
    |||||| |||||||||||||||| |||||| |||||||||| || |  ||| |||||||| |  | | ||  |||| || |||||||| | |||  ||||    
T  41088996 cctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttata-acgaaatacattaattattcaat 41088898  T
Q  108 gaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||| | ||||||||||||||||||| ||||||||||||||| |||||    
T  41088897 gaatctaaaaagtcaattgtttcttgtaataaggaccggagggagta 41088851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 48948938 - 48949027
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgatt--ttttaggttcatagaataattaatgtattttattgtacatatagacta 88  Q
    |||||||| ||||| |||||||||||||||| |||| | |  |||| ||||||||||||||||||||||| || || || ||||||||||    
T  48948938 aaatactttctccggtccttattataagaaataattaactcttttttggttcatagaataattaatgtatcttgttataaatatagacta 48949027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 2400026 - 2399969
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    ||||||| ||||||||||| ||| |||||||| |||||||||||| ||||||||||||    
T  2400026 atatagattaaatacatcatttatacaatgaatcaaaaaagtcaaatgtttcttataa 2399969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 8566212 - 8566099
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||||||||||| ||||| || ||||| |||||| || |     |||||||| |||||||||| |||  ||||||| |||||||||     
T  8566212 ttataagaaaaatttgattttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaagtt 8566113  T
Q  122 aattgtttcttata 135  Q
    || |||||||||||    
T  8566112 aaatgtttcttata 8566099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 41487941 - 41487789
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaa-atacatcactta 101  Q
    ||||| |||||| |||||||||||||||| |||||||||||| ||||||| |  ||| | |||||| | | | || || || | ||| |||||| | |||    
T  41487941 atactccctccggtccttattataagaaacaattgatttttttggttcattgtgtaagtgatgtatct-agtctatatttacaataagatacattaatta 41487843  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
      | ||||||| |||||||||| | |||||||||||||||||||||| ||||||    
T  41487842 ttctatgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 41487789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 11668164 - 11668013
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||||||| || ||||  |||||||||||| |||| ||||||  ||||| || ||||| |||||| || |     |||||||  ||||| |||| |||      
T  11668164 tacttccttcggtcctatttataagaaaaatttgactttttacattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatg 11668065  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||| ||||||    
T  11668064 caatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtat 11668013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 13860302 - 13860360
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    |||||| | ||| |||||||| | ||||||||||||||||||||||||||||| |||||    
T  13860302 atacattaattatacaatgaatctaaaaagtcaattgtttcttataataaggatcggag 13860360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 24164667 - 24164617
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||||| ||||||||||||||||||||||| | |||| |||||||||||||    
T  24164667 aatactccctccgatccttattataagaaacatttgactttttaggttcat 24164617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 29365751 - 29365629
Alignment:
Q  23 tataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtca 122  Q
    |||||||||||||||| ||||||| ||||| || ||||||||||||||  |     |||||||  |||||||||| |||  ||||| |  ||||||||||    
T  29365751 tataagaaaaaattgactttttagattcattgagtaattaatgtatttggtatagaatatagatcaaatacatcatttatgcaatgtattaaaaaagtca 29365652  T
Q  123 attgtttcttataataaggaccg 145  Q
    | ||||||||||||  |||||||    
T  29365651 aatgtttcttataaataggaccg 29365629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 45533247 - 45533361
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    ||||||||||||||||| ||||||| |||||    |||||||||||| || |     |||||||| |||||||| | ||| ||||||||  |||||||||    
T  45533247 ttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctagaatatagaccaaatacattatttatacaatgaattaaaaaagtc 45533346  T
Q  122 aattgtttcttataa 136  Q
    || ||||||||||||    
T  45533347 aaatgtttcttataa 45533361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 2610204 - 2610336
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||||||||||  ||||| || ||||| ||||||||  |     ||||||||||||||||||| |||  |||||||  |||||| ||    
T  2610204 ttataagaaaaatttgattttttaaattcattgagtaattgatgtatttggtctagaatatagactaaatacatcatttatgcaatgaattaaaaaattc 2610303  T
Q  122 aattgtttcttataataaggaccggagagagtat 155  Q
     ||||||||||||||  | ||||||| |||||||    
T  2610304 -attgtttcttataaataagaccggatagagtat 2610336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 6838449 - 6838506
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    |||||||| |||||||||| |||  ||||||| |||||||||||| ||||||||||||    
T  6838449 atatagaccaaatacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataa 6838506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 12806955 - 12806906
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| |||||||||| | |||||||||||||||||||||| ||||||    
T  12806955 atgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 12806906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 47612441 - 47612289
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttat-tgtacatatagactaaatacatcactt 100  Q
    |||||| |||||| ||||||||||||| |  |||||| ||||||||||||| | |||| |||||||| |  | | ||  |||| || | |||||| | ||    
T  47612441 aatactccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttata-acgagatacattaatt 47612343  T
Q  101 acacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |  ||||||||| ||||||||| ||||| || |||||||||||||||| |||||    
T  47612342 attcaatgaacctaaaaagtcatttgttgctaataataaggaccggagggagta 47612289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 29835214 - 29835099
Alignment:
Q  23 tataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtca 122  Q
    |||||||||  ||| | ||||||| ||||| ||||||||||| ||| |  ||||| ||||| | || |||||||| ||||||||| || | |||||||||    
T  29835214 tataagaaactattaactttttagattcattgaataattaatatatctcgttgtaaatataaattagatacatcatttacacaataaatctaaaaagtca 29835115  T
Q  123 attgtttcttataataa 139  Q
    ||| ||| |||||||||    
T  29835114 att-ttttttataataa 29835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 33901085 - 33901037
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||| ||||||| |||||||||||||||||||||||| |||| |||||    
T  33901085 atgaatcaaaaaaatcaattgtttcttataataaggacaggagggagta 33901037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 40198651 - 40198603
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||||| |||||||||| | |||||||||||||||||||||| |||||    
T  40198651 atgaacctaaaaagtcaactttttcttataataaggaccggagggagta 40198603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 10674267 - 10674224
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||    
T  10674267 cctccgatccttattataagaaacaattgactttttagattcat 10674224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 106 - 145
Target Start/End: Complemental strand, 24932430 - 24932391
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccg 145  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  24932430 atgaacctaaaaagtcaattttttcttataataaggaccg 24932391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 27320444 - 27320381
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgt 66  Q
    ||||| |||| | |||||||||||||||| |||||||||||| ||||||| | |||| ||||||    
T  27320444 atactccctctggtccttattataagaaacaattgatttttttggttcattgtataagtaatgt 27320381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 257
Target Start/End: Original strand, 46864858 - 46864893
Alignment:
Q  222 tgttgttcatcctaccttaatctcaaccatttacta 257  Q
    |||||| |||||||||||||||||||||||||||||    
T  46864858 tgttgtccatcctaccttaatctcaaccatttacta 46864893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 4826837 - 4826911
Alignment:
Q  81 atagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||| ||||||||||  ||  ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  4826837 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 4826911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 19372766 - 19372732
Alignment:
Q  113 aaaaaagtcaattgtttcttataataaggaccgga 147  Q
    |||||||||||||||||||||||||||||| ||||    
T  19372766 aaaaaagtcaattgtttcttataataaggatcgga 19372732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 22618306 - 22618264
Alignment:
Q  10 ctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    ||||| |||||||||||||||| |||||| |||||||||||||    
T  22618306 ctccggtccttattataagaaacaattgactttttaggttcat 22618264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 32811450 - 32811396
Alignment:
Q  81 atagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttata 135  Q
    |||||| |||||||||| |||  ||||||| ||||||||| ||||||||||||||    
T  32811450 atagaccaaatacatcaattattcaatgaatcaaaaaagtaaattgtttcttata 32811396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 136
Target Start/End: Complemental strand, 2523920 - 2523787
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| ||||  |||||||||||| |||| ||||||| ||||| || ||||||||||| ||        |||||||| | |||||||  |||     
T  2523920 atactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggcatagaatatagaccagatacatcgtttat 2523821  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataa 136  Q
     ||||||| |||||||||||| ||||||||||||    
T  2523820 gcaatgaatcaaaaaagtcaaatgtttcttataa 2523787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 155
Target Start/End: Complemental strand, 44682637 - 44682564
Alignment:
Q  82 tagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||| |||||||||| ||||  |||||| |  ||||||||| | ||||||||||  |||||||||||||||||    
T  44682637 tagacaaaatacatcagttacttaatgaatctcaaaagtcaaatttttcttataaataggaccggagagagtat 44682564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 45025744 - 45025695
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||||||||||| || ||||||||||||| | |||||||||||| |||||    
T  45025744 atacttcctccggtctttattataagaaacatttgattttttagattcat 45025695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 10007725 - 10007661
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtat 68  Q
    |||| |||||| ||||  |||||||||||| |||| ||||||| ||||| | |||||||||||||    
T  10007725 tactccctccggtcctatttataagaaaaagttgactttttagattcattgtataattaatgtat 10007661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 28936059 - 28936119
Alignment:
Q  10 ctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    |||| ||||||||||| | ||| |||||| ||||||| || || |||||||||||||||||    
T  28936059 ctccaatccttattattaaaaacaattgactttttagatttattgaataattaatgtattt 28936119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 36245461 - 36245525
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||||| |||| ||||||| | |||||||||||| ||||||||||  ||||| |||| |||||    
T  36245461 atacatcaattactcaatgaatctaaaaagtcaattttttcttataaataggacaggagggagta 36245525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 48948991 - 48948940
Alignment:
Q  106 atgaaccaaaaaag--tcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||  | |||| ||||||||||||||||||||||| |||||    
T  48948991 atgaaccaaaaaagagttaattatttcttataataaggaccggagaaagtat 48948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 34604778 - 34604931
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| |||||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||| |||||||||| ||||||||||||    
T  34604778 aatactccctccggtccttattataagaaaaagttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcactta 34604877  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
     |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  34604878 tacaatgaaccaaaaaaatcaattgtttcttataataaggaccggagggagtat 34604931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 13832025 - 13831873
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||     
T  13832025 atactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactatatacatcacttat 13831926  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||||||||||||| |||||||||||||||||||||||| || ||||||    
T  13831925 acaatgaaccaaaaaagttaattgtttcttataataaggaccgaagggagtat 13831873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 7548648 - 7548496
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgatttttt-aggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    ||||| |||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||| || |||||||| |||||| ||||||||||||||||    
T  7548648 atactccctccggtccttattataagaaaaagttgatttttttaggttcatagaataattaatgcatcttattgtaaatatagtctaaatacatcactta 7548549  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  7548548 cacaatgaaccaaaaaaattaattgtttcttataataaggaccggagggagta 7548496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 29690447 - 29690579
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||| |||||||||||||    
T  29690447 tccttattataagaaaaaactgactttttaggttcatagaataattaatgtatcttattataaatatagactagatacatcacttatacaatgaaccaaa 29690546  T
Q  116 aaagtcaattgtttcttataataaggaccggag 148  Q
    ||||| |||||||||||||||||||||||||||    
T  29690547 aaagttaattgtttcttataataaggaccggag 29690579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45372704 - 45372855
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| |||||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||| | |||||||||| ||||||||||||||    
T  45372704 tactccctccggtccttaatataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttaca 45372803  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    || |||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  45372804 cattgaatcaaaaaagtcaattgttacttataataaggaccggagggagtat 45372855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 35583881 - 35584033
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||  ||||||||||||||||||  |||  |||||||||||||||||||||||||||| |||||||| ||||||| || ||||||||||||     
T  35583881 atactccctccagtccttattataagaaaaatatgaccttttaggttcatagaataattaatgtatcttattgtaaatatagattagatacatcacttat 35583980  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  35583981 acaatgaaccaaaaaagttaattgtttcttataataaggaccggagggagtat 35584033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 43292566 - 43292707
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||||||| || || || |||||||||| |||||||||||||    
T  43292566 atactccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttac 43292665  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggacc 144  Q
    | |||||||| |||||||||| ||||||||||||||||||||    
T  43292666 ataatgaacctaaaaagtcaaatgtttcttataataaggacc 43292707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 43932200 - 43932047
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| |||||||||||||||| |||||| ||||||| ||||| ||||||||||||||| || || || ||||||| || |||||||| ||     
T  43932200 aatactccctccggtccttattataagaaacaattgactttttagattcattgaataattaatgtatcttgttataaatatagattagatacatcatttg 43932101  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
     |||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  43932100 tacaatgaacctaaaaagtcaattgtttcttataataaggaccggagggagtat 43932047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 34745253 - 34745409
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    ||||||| |||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||||||| || || || |||||||||| |||||||||||    
T  34745253 aaatactccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcactt 34745352  T
Q  101 acacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtatca 157  Q
    ||| |||||| | ||||| |||| ||||||||||||||| || |||||| |||||||    
T  34745353 acataatgaatctaaaaaatcaaatgtttcttataataaagatcggagaaagtatca 34745409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 44580030 - 44579907
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||| |||||||||| ||| || ||||| ||||| || ||||    
T  44580030 tccttattataagaaaaagttgactttttaagttcatagaataattaatgtatcttattgtaaatatagactagatatattacttatacaataaatcaaa 44579931  T
Q  116 aaagtcaattgtttcttataataa 139  Q
    ||||| ||||||||||||||||||    
T  44579930 aaagttaattgtttcttataataa 44579907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 38298632 - 38298517
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||| |  || || |||||| ||| ||||||||||||||||||||||  ||||||||    
T  38298632 ttataagaaacaattgattttttaggttcattgaataattaatgtatctcgttataaatataggctagatacatcacttacacaatgaacttaaaaagtc 38298533  T
Q  122 aattgtttcttataat 137  Q
    |||| |||||||||||    
T  38298532 aattatttcttataat 38298517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 43409985 - 43409832
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| |||||||||| || || || ||| ||||| ||||||| ||||||||||||||  |  || || |||||||||| |||||| |||||    
T  43409985 aatactccctccggtccttattattagcaacaaatgactttttcggttcattgaataattaatgtacctcgttataaatatagactagatacattactta 43409886  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
     |||||||||| ||||||||||||| | ||||||||||||||||||| ||||||    
T  43409885 tacaatgaacctaaaaagtcaattgctgcttataataaggaccggagggagtat 43409832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 38494253 - 38494379
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaa 118  Q
    ||||||||||||| |||||| |||||  |||||||||||||||||||||| || || || ||||| | || ||||| |||||||||||| |||| |||||    
T  38494253 ttattataagaaataattgactttttttgttcatagaataattaatgtatcttgttataaatataaattagatacaccacttacacaataaacctaaaaa 38494352  T
Q  119 gtcaattgtttcttataataaggaccg 145  Q
     |||||| |||||||||||||| ||||    
T  38494353 atcaattttttcttataataagaaccg 38494379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 40645813 - 40645715
Alignment:
Q  50 catagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    ||||||||||||||||||| || || || |||||||||| |||||||||||||| |||||||  |||||||||| ||||||||||||||||||| ||||    
T  40645813 catagaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaacttaaaaagtcaaatgtttcttataataaggactggag 40645715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 9633092 - 9633221
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||| ||||||  |||||| ||||| | ||||||||||||| || || || |||||||||| ||||||   |||||||||||||  ||    
T  9633092 tccttattataagaaacaattgacgttttagattcattgtataattaatgtatcttgttataaatatagactagatacattgtttacacaatgaacttaa 9633191  T
Q  116 aaagtcaattgtttcttataataaggaccg 145  Q
    |||||||| |||||||||||| ||||||||    
T  9633192 aaagtcaaatgtttcttataagaaggaccg 9633221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 45180113 - 45180188
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || |||||    
T  45180113 atatagactagatacatcacttacacaatgaaccaaaaaagtcaattgttttttataataaagaccgaagggagta 45180188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 144
Target Start/End: Original strand, 24599674 - 24599808
Alignment:
Q  10 ctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatga 109  Q
    ||||| || ||||||||||||| |||||| ||||||  ||||| |||||| |||||||||| ||| || ||||||  || |||||||| ||| |||||||    
T  24599674 ctccggtctttattataagaaataattgactttttaaattcattgaataaataatgtatttcattataaatataggttagatacatcagttatacaatga 24599773  T
Q  110 accaaaaaagtcaattgtttcttataataaggacc 144  Q
    | | ||||| ||||||||||||||| |||||||||    
T  24599774 atctaaaaaatcaattgtttcttattataaggacc 24599808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 7693164 - 7693050
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    ||||||||||||||||| ||||||| ||||| || ||||||||||||||  |   | ||||||||||||||||||| |||  ||||||| |||||||||     
T  7693164 ttataagaaaaaattgactttttagattcattgagtaattaatgtatttggtataaaatatagactaaatacatcatttatgcaatgaatcaaaaaagta 7693065  T
Q  122 aattgtttcttataa 136  Q
    || ||||||||||||    
T  7693064 aaatgtttcttataa 7693050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 9550245 - 9550107
Alignment:
Q  17 ccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaa 116  Q
    ||||||||||||||| |||||| ||||||  || || |||||| |||||||| |  |  || |||||||||| ||||||||||||| |||||||   |||    
T  9550245 ccttattataagaaacaattgactttttaaatttattgaataactaatgtatctcgtaataaatatagactagatacatcacttacccaatgaatttaaa 9550146  T
Q  117 aagtcaattgtttcttataataaggaccggagagagtat 155  Q
    || |||||| ||||||||||||| |||||||| ||||||    
T  9550145 aaatcaattatttcttataataaagaccggagggagtat 9550107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 41624850 - 41624737
Alignment:
Q  41 ttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataag 140  Q
    ||||||||| || |||||||||| |||| || || || ||||||||||||||||||||||| | || ||||| |||||||||  |||||||||||||||     
T  41624850 ttttaggttgattgaataattaacgtatgttgttataaatatagactaaatacatcacttatataaggaacctaaaaagtcatatgtttcttataataaa 41624751  T
Q  141 gaccggagagagta 154  Q
    || ||||| |||||    
T  41624750 gatcggagggagta 41624737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 8793736 - 8793869
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttat-tgtacatatagactaaatacatcacttacacaatgaaccaaaaaagt 120  Q
    ||||||| |||| ||||| |||||| ||||| || ||||| ||||||||  | | || ||||||||||||||||||| |||  ||||||| |||||||||    
T  8793736 ttataagtaaaagttgatattttagattcattgagtaattgatgtatttggtctata-atatagactaaatacatcatttatgcaatgaatcaaaaaagt 8793834  T
Q  121 caattgtttcttataataaggaccggagagagtat 155  Q
    ||| | ||||||||||  |||||||||||||||||    
T  8793835 caaatatttcttataaataggaccggagagagtat 8793869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 43932046 - 43932199
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttat-tgtacatatagactaaatacatcactt 100  Q
    |||||| |||||| |||||||||||||||| |||||| ||||||||||||| | | || | |||||| | || | ||  |||| || | |||||| | ||    
T  43932046 aatactccctccggtccttattataagaaacaattgactttttaggttcattgtacaaatgatgtatctaatctatatttata-acaagatacattaatt 43932144  T
Q  101 acacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |  ||||||| | ||||||||||||||||||||||||||||||||||| ||||||    
T  43932145 attcaatgaatctaaaaagtcaattgtttcttataataaggaccggagggagtat 43932199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 34745304 - 34745255
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34745304 atgaaccaaaaaagtcaattgtttcttataataaggaccggagggagtat 34745255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 43292615 - 43292566
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43292615 atgaaccaaaaaagtcaattgtttcttataataaggaccggagggagtat 43292566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 27108139 - 27108000
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| | |||||||||| ||| || ||||||||||| ||||| ||||||||||  ||| |  || || ||| ||| || |||||||| ||||    
T  27108139 atactacctccggttcttattataaaaaataactgattttttagattcattgaataattaacatatctcgttataaatacagattagatacatcatttac 27108040  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataagga 142  Q
    | |||||||  |||| | ||||||||||||||||||||||    
T  27108039 ataatgaacataaaatgacaattgtttcttataataagga 27108000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 8242194 - 8242137
Alignment:
Q  97 acttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| ||| |||||||||    
T  8242194 acttatacaatgaaccaaaaaagtcaactgtttcttataataagaaccagagagagta 8242137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 10184702 - 10184581
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||||||||||||| |  |||||||||||||| || ||||||| ||||| |||||||| |||||| | ||     |||||||| |||||||||| |||    
T  10184702 aatacttcctccgatcatatttataagaaaaaatcgactttttagattcattgaataattgatgtatatgatccagaatatagaccaaatacatcattta 10184603  T
Q  102 cacaatgaaccaaaaaagtcaa 123  Q
     ||||||||  |||||||||||    
T  10184602 tacaatgaataaaaaaagtcaa 10184581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 34604931 - 34604779
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaa-atacatcactta 101  Q
    ||||| |||||| |||||||||||||||| |||||||||||| ||||||| | |||| | |||||| | | | || || || | ||| |||||| | |||    
T  34604931 atactccctccggtccttattataagaaacaattgatttttttggttcattgtataagtgatgtatct-agtctatatttacaataagatacattattta 34604833  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
      | ||||||| |||||||||| | |||||||||||||||||||||| ||||||    
T  34604832 ttctatgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 34604779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 35149799 - 35149666
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||||||||||| || || |  |||||||||||| || |     |||||||| |||||||||| |||  |||| || ||||||||||    
T  35149799 ttataagaaaaagttgattttttagatttattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaattaatcaaaaaagtc 35149700  T
Q  122 aattgtttcttataataaggaccggagagagtat 155  Q
    || ||||||||||||  |||||||| ||||||||    
T  35149699 aaatgtttcttataaataggaccggggagagtat 35149666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 5031538 - 5031614
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||||||| |||  ||||||| |||||||||||| ||||||||||||  |||| || |||||||||    
T  5031538 atatagactaaatacatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataaataggagcgaagagagtat 5031614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 9420697 - 9420585
Alignment:
Q  43 ttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataagga 142  Q
    |||||||| | ||||||||||||||  |  || || |||||||| | |||||| ||||| |||||||| | |||| |||||||| | |||||||||||||    
T  9420697 ttaggttctttgaataattaatgtacctcgttataaatatagaccagatacattacttatacaatgaatctaaaacgtcaattgctgcttataataagga 9420598  T
Q  143 ccggagagagtat 155  Q
    |||||| ||||||    
T  9420597 ccggagggagtat 9420585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 10839762 - 10839904
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    ||||||||||  ||||  ||||||||||||||||| ||||||| ||||| |||||||||||||| ||  |     |||||||| |||||||||| |||      
T  10839762 tacttcctccagtcctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatatagaccaaatacatcatttatg 10839861  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccgga 147  Q
    ||||||| | ||||||| || ||||||||||||  |||||||||    
T  10839862 caatgaatc-aaaaagttaaatgtttcttataaataggaccgga 10839904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 34711098 - 34711232
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||| |||||||||| ||||||| ||||| || ||||| ||||||||| |   | ||||| ||||||||||||| | |  |||| || |||||||||     
T  34711098 ttataaaaaaaaattgactttttagattcattgagtaattgatgtattttgtctaaaatataaactaaatacatcattaatgcaataaatcaaaaaagtt 34711197  T
Q  122 aattgtttcttataataaggaccggagagagtatca 157  Q
    |||| ||| ||||||  || ||||||||||||||||    
T  34711198 aatttttt-ttataaatagaaccggagagagtatca 34711232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 35011209 - 35011363
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| ||||  |||||||||||| || ||||||||| |||||  |||||||||||||   ||   || | |||||| ||||||||||  ||    
T  35011209 aatactacctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgta-cctagcctagaaatagaccaaatacatcaacta 35011307  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttata-ata-aggaccggagagagtat 155  Q
      ||||||| ||||||||| |||||||||||||| ||| |||||||||| ||||||    
T  35011308 ttcaatgaatcaaaaaagtaaattgtttcttatatatataggaccggagggagtat 35011363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 3236353 - 3236479
Alignment:
Q  28 gaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgt 127  Q
    ||||||||||| ||||||  ||||| |||||||| |||||| |  ||  | || ||||| |||||||||| ||| ||||||||  ||||||||||| | |    
T  3236353 gaaaaaattgactttttaaattcattgaataattgatgtatctagtttaaaatttagaccaaatacatcatttatacaatgaattaaaaaagtcaaatat 3236452  T
Q  128 ttcttataataaggaccggagagagta 154  Q
    |||||||||  | |||||||| |||||    
T  3236453 ttcttataaatatgaccggagggagta 3236479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 16448920 - 16448794
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| || | ||||||| ||||| || ||||| |||||| ||||     ||||| || ||||| |||| |||  ||||||| ||||||||||    
T  16448920 ttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatatagaatataaaccaaatatatcatttatgcaatgaatcaaaaaagtc 16448821  T
Q  122 aattgtttcttataataaggaccggag 148  Q
    || ||||||||||||  ||||||||||    
T  16448820 aaatgtttcttataaataggaccggag 16448794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 155
Target Start/End: Complemental strand, 42123090 - 42122964
Alignment:
Q  29 aaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtt 128  Q
    |||||||||| ||||||| ||||| || |||||||||||| || |     ||||| || |||||||||| |||  ||||||| ||||||||||||  |||    
T  42123090 aaaaaattgactttttagattcattgagtaattaatgtatcttgtctagaatatataccaaatacatcatttatgcaatgaatcaaaaaagtcaaacgtt 42122991  T
Q  129 tcttataataaggaccggagagagtat 155  Q
    ||||||||  ||||| |||| ||||||    
T  42122990 tcttataaataggactggagggagtat 42122964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 13831976 - 13832025
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| |||||||||| | |||||||||||||||||||||| ||||||    
T  13831976 atgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 13832025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 30734581 - 30734516
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||| |||||||||||| | ||||| | | |||||||||||||||||||||| || ||||||    
T  30734581 atacatcaattacacaatgaatctaaaaaataatttgtttcttataataaggaccgaagggagtat 30734516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 32597572 - 32597515
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    |||||||| |||||||||  |||| ||||||| |||||||||||| ||||||||||||    
T  32597572 atatagacaaaatacatcgtttacgcaatgaatcaaaaaagtcaaatgtttcttataa 32597515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 44796417 - 44796494
Alignment:
Q  81 atagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtatcac 158  Q
    |||||| ||||||||||  ||  ||||||| ||||||||| ||||||||||||||   |||||||||| |||||||||    
T  44796417 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtatcac 44796494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 5356804 - 5356936
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    ||||||||||||| || |||||| ||||||| ||||| | |||||||| | || |  || || |||| || || |||||||||||| ||||| || | ||    
T  5356804 tccttattataagcaacaattgactttttagattcattggataattaacgcatctcgttataaatatggattagatacatcacttatacaataaatctaa 5356903  T
Q  116 aaagtcaattgtttcttataataaggaccggag 148  Q
    ||||| || |||| |||||||||| ||| ||||    
T  5356904 aaagttaactgttgcttataataaagacgggag 5356936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 9633144 - 9633089
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccg 145  Q
    |||||| | ||| |||||||| | |||| |||||||||||||||||||||||||||    
T  9633144 atacattaattatacaatgaatctaaaacgtcaattgtttcttataataaggaccg 9633089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 22429534 - 22429684
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  |||||||||||| || ||||||||| || ||  |||||||||||||  | |   || | |||||| ||||||||||  ||      
T  22429534 tactacctccggtcctatttataagaaaaagttaattttttagatttattcaataattaatgtacct-agcctagaaatagaccaaatacatcaactatt 22429632  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  22429633 caatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 22429684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 18 - 49
Target Start/End: Complemental strand, 38494374 - 38494343
Alignment:
Q  18 cttattataagaaaaaattgattttttaggtt 49  Q
    ||||||||||||||||||||||||||||||||    
T  38494374 cttattataagaaaaaattgattttttaggtt 38494343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 43409933 - 43409984
Alignment:
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||| ||||||||| ||||| || |||||||||||||||| ||||||    
T  43409933 caatgaaccgaaaaagtcatttgttgctaataataaggaccggagggagtat 43409984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 5356842 - 5356792
Alignment:
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||||| | ||||||||||||||| |||||||||||||||| ||| ||||    
T  5356842 caatgaatctaaaaagtcaattgttgcttataataaggaccgaagaaagta 5356792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 6616637 - 6616591
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtat 68  Q
    ||||||| ||||| ||||||||||||| ||| |||||||||||||||    
T  6616637 ttataagcaaaaaatgattttttaggtacatggaataattaatgtat 6616591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 12958851 - 12958925
Alignment:
Q  81 atagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||| ||||||||||  ||  ||||||| ||||||||| ||||||||||||||   |||||||||| ||||||    
T  12958851 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagtat 12958925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 14578516 - 14578562
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtat 68  Q
    ||||||| ||||||| || |||||||||||| |||||||||||||||    
T  14578516 ttataagcaaaaattaatattttaggttcattgaataattaatgtat 14578562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 15726908 - 15726851
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataatt 61  Q
    ||||||| ||||||||  ||||||||||||||||| ||||||| ||||| || |||||    
T  15726908 tacttccgccgatcctatttataagaaaaaattgactttttagattcattgagtaatt 15726851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 24619032 - 24618975
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    |||||||| |||||||||| |||  ||||||| ||||||||||||  |||||||||||    
T  24619032 atatagaccaaatacatcatttatgcaatgaatcaaaaaagtcaaaggtttcttataa 24618975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 34745407 - 34745358
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||||| |||||||| ||||||||||||| | |||||||||||| |||||    
T  34745407 atactttctccgatctttattataagaaacatttgattttttagattcat 34745358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 35794611 - 35794676
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||| | |||| ||||||| | ||||||| ||  ||||||||||||||||||||||| ||||||    
T  35794611 atacattaattactcaatgaatctaaaaagtaaaaagtttcttataataaggaccggagggagtat 35794676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 43409832 - 43409897
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtat 68  Q
    ||||| |||||| ||||||||||||| |  |||||| ||||||||||||| | |||| ||||||||    
T  43409832 atactccctccggtccttattataagcagcaattgactttttaggttcattgtataagtaatgtat 43409897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 7548496 - 7548544
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||| |||||| |||||||||||||||| |||| ||||||| |||||||    
T  7548496 tactccctccggtccttattataagaaacaattaatttttttggttcat 7548544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9550105 - 9550149
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgatttttta 45  Q
    ||||||| |||||| || ||||||||||||| |||||||||||||    
T  9550105 aaatactccctccggtctttattataagaaataattgatttttta 9550149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 29690585 - 29690537
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    ||||||||||| |||||||||||||||| |||| | ||||| |||||||    
T  29690585 tacttcctccggtccttattataagaaacaattaacttttttggttcat 29690537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 45372752 - 45372704
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||||| |||||||||| | ||||||||| |||||||||||| |||||    
T  45372752 atgaacctaaaaagtcaactttttcttatattaaggaccggagggagta 45372704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 20502085 - 20502230
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    |||||||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  20502085 atacttcctccggtccttattataagaaaaagttgactttttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttac 20502184  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    |||||||||||||||| | |||||||||||||||||||||||||||    
T  20502185 acaatgaaccaaaaaaattaattgtttcttataataaggaccggag 20502230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 29451891 - 29452042
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||||| |||| |||||||||||||    
T  29451891 atactccctccggtccttattataagaaaaagttgattttttagattcatagaataattaatgtatcttattgtaaatatatactagatacatcacttac 29451990  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  29451991 acaatgaaccaaaaaa-tcaattgtttcttataataaggatcggagggagtat 29452042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 5355550 - 5355701
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| ||||||||| ||||| ||||||||| || |  |||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  5355550 tactccctccgatctttattctaagaaaaagttaacattttaggttcatagaataattaatgtatcttattgtaaatataaactaaatacatcacttaca 5355649  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  5355650 caatgaactaaaaaagtcaactgtttcttataataaggaccggagggagtat 5355701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 7537018 - 7537171
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| | ||||||||||||||||||||| || ||||||| |||||||||||||||||| |||| ||| ||||| |||| ||||||||||||    
T  7537018 aatactccctccggttcttattataagaaaaaattgacttcttaggttaatagaataattaatgtatcttatcgtaaatatatactagatacatcactta 7537117  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||| ||||||    
T  7537118 cacaatgaaccaaaaaaatcaattgttttttataataaggaccggagggagtat 7537171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 29874461 - 29874315
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatg 108  Q
    |||||| |||||| ||||||||||| || | |||||||||||||||||||||||||||||||||||  | |||||||||| |||||||||||| ||||||    
T  29874461 cctccggtccttaatataagaaaaagttaactttttaggttcatagaataattaatgtattttattaaaaatatagactagatacatcacttaaacaatg 29874362  T
Q  109 aaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  29874361 aaccaaaaaagtcaattgtttcttatattaagaaccggagggagtat 29874315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 38978753 - 38978891
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| |||||||||| ||||||||||||||||||||||||||    
T  38978753 tccttattataagaaaaagttgactttttagattcatagaataattaatatatcttattgtaaatatagactagatacatcacttacacaatgaaccaaa 38978852  T
Q  116 aaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||| | ||||||||||||||||||||| ||||| |||||    
T  38978853 aaaattaattgtttcttataataaggatcggagggagta 38978891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 9630379 - 9630245
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatg 108  Q
    |||||| || ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| |||||  ||||||| |||||||||||||||    
T  9630379 cctccggtctttattataacaaaaaattgattttttagattcatagaataattaatgtatcttattgtaaatataatctaaatatatcacttacacaatg 9630280  T
Q  109 aaccaaaaaagtcaattgtttcttataataaggac 143  Q
    |||||||||| | ||||||||||||||||||||||    
T  9630279 aaccaaaaaaattaattgtttcttataataaggac 9630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 29002879 - 29002741
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||||| ||||||||||||||| || ||||||||||| ||| |||| | | |||||||||| ||||||||||||||||||||||||||    
T  29002879 tccttattataagaaaaagttgattttttaggtttatggaataattaatatatcttatcgaaaatatagactagatacatcacttacacaatgaaccaaa 29002780  T
Q  116 aaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||||||||||||||||||| ||||| ||||| |||||    
T  29002779 aaagtcaattgtttcttataacaaggatcggagggagta 29002741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 33247442 - 33247290
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    ||||||||||||| ||||| |||||||||||| |||| |||||||||||||| |||||||||| ||| |||||||| |||||||||| ||| ||||||||    
T  33247442 aatacttcctccggtccttgttataagaaaaagttgactttttaggttcata-aataattaatatatcttattgtaaatatagactagatatatcactta 33247344  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
     | |||||||||||||||| |||||| |||||||||||||||||||| ||||||    
T  33247343 tagaatgaaccaaaaaagttaattgtctcttataataaggaccggagggagtat 33247290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 35204937 - 35205057
Alignment:
Q  18 cttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaa 117  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||| |||||| ||| ||||||| |||||||||||||| |||||    
T  35204937 cttattataagaaaaagttgatttt-taggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcccttacacaatgaactaaaaa 35205035  T
Q  118 agtcaattgtttcttataataa 139  Q
    ||||||||||||||||||||||    
T  35205036 agtcaattgtttcttataataa 35205057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 35212222 - 35212102
Alignment:
Q  18 cttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaa 117  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||| |||||| ||| ||||||| |||||||||||||| |||||    
T  35212222 cttattataagaaaaagttgattttt-aggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcccttacacaatgaactaaaaa 35212124  T
Q  118 agtcaattgtttcttataataa 139  Q
    ||||||||||||||||||||||    
T  35212123 agtcaattgtttcttataataa 35212102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 24173557 - 24173418
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||||| |||| |||||| ||| |||||||||||||||||| |||||| | ||||||| || |||||||||||||||||||||| |||    
T  24173557 tccttattataagaaaaagttgactttttaagtttatagaataattaatgtatcttattgaaaatatagattagatacatcacttacacaatgaactaaa 24173458  T
Q  116 aaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||| |||||| ||||||||||||||||| |||| ||||||    
T  24173457 aaaatcaattatttcttataataaggactggagggagtat 24173418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 32455276 - 32455139
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||||| || |  ||||| |||||||||||||||||||||| |||||||| |||||||||| ||||||||||| ||||||||| ||||    
T  32455276 tccttattataagaaaaagttaacattttaagttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttccacaatgaatcaaa 32455177  T
Q  116 aaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||||  |||||||||| ||||||||||| ||||||    
T  32455176 aaagtcaat--tttcttataacaaggaccggagggagtat 32455139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 27600758 - 27600900
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| || ||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||| ||||||| || ||| ||||||||||    
T  27600758 tactccctccggtctttattataagaaaaa-ttgactttttaagttcatagaataattaatgtatcttattgtaaatatagattagataaatcacttaca 27600856  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccgga 147  Q
    ||||||| ||||||| |||||| |||||||||||||||| ||||    
T  27600857 caatgaatcaaaaaaatcaattatttcttataataaggatcgga 27600900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 33970801 - 33970671
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatg 108  Q
    |||||| |||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||  | ||||| ||||||||||||| ||| |||||     
T  33970801 cctccggtccttattataagaaaaagttgattgtttagtttcatagaataattaatgtattttattaaaaatatatactaaatacatcatttatacaata 33970702  T
Q  109 aaccaaaaaagtcaattgtttcttataataa 139  Q
    ||  |||||||| ||||||||||||||||||    
T  33970701 aaataaaaaagttaattgtttcttataataa 33970671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 13932460 - 13932610
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||| |||||||||| |||||| |||||| |||||| | ||||||||||||| |  || || ||| |||||| ||||||||||||||    
T  13932460 tactccctccggtccttgttataagaaacaattgactttttatgttcattggataattaatgtatctcgttataaatagagactagatacatcacttaca 13932559  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    || |||||| |||||||||||| |||||||||||||||||| ||| |||||    
T  13932560 cagtgaacctaaaaagtcaattatttcttataataaggaccagagggagta 13932610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 73934 - 73780
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| || ||||||||||||| |||||| |||| |||||||| ||||||||||| ||| |  || || | | ||| || |||||||| ||||    
T  73934 atactccctccggtctttattataagaaacaattgacttttcaggttcattgaataattaatatatctcgttataaacaaagagtagatacatcatttac 73835  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtatca 157  Q
    |||||||| | |||||||||||||||| |||||||||||||||||| ||||||||    
T  73834 acaatgaatctaaaaagtcaattgttttttataataaggaccggagggagtatca 73780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 13278903 - 13279029
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||| ||||||||||||||||| || ||||| |||||| || |  || || ||||| | || |||||||||||||||||| || | ||||||||    
T  13278903 ttataagaaacaattgattttttaggtttattgaatagttaatgcatctcgttataaatataaattagatacatcacttacacaataaatctaaaaagtc 13279002  T
Q  122 aattgtttcttataataaggaccggag 148  Q
    || ||||||||||||||||||||||||    
T  13279003 aactgtttcttataataaggaccggag 13279029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 29299355 - 29299508
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| ||||  |||||||||||| |||||||||||| ||||| || | ||| ||||||||| |   | ||||||||  ||||||||| |||     
T  29299355 atactccctccggtcctatttataagaaaaatttgattttttagattcattgagtgattgatgtattttgtctaaaatatagaccgaatacatcatttat 29299454  T
Q  103 acaatgaa-ccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||  |||||||||||| ||||||||||||  |||||||||| ||||||    
T  29299455 acaatgaattcaaaaaagtcaaatgtttcttataactaggaccggagggagtat 29299508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 8680627 - 8680690
Alignment:
Q  91 tacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||| |||||    
T  8680627 tacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataaggaccggagggagta 8680690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 19211276 - 19211378
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    ||||||| |||||| ||||||||||||||||   |||| ||||||  ||||| || |||||||||||| || ||||| |||||||||| |||||||||||    
T  19211276 aaatactccctccggtccttattataagaaacttttgactttttatattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcactt 19211375  T
Q  101 aca 103  Q
    |||    
T  19211376 aca 19211378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 38394427 - 38394559
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||||||||  ||||||||||||||||| ||||||| ||||| |||||||||||||| ||  |     || ||||| |||||||||| |||      
T  38394427 tactccctccgatcctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatg 38394526  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataa 136  Q
    ||||||| ||||||||| || ||||||||||||    
T  38394527 caatgaatcaaaaaagtaaaatgtttcttataa 38394559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 1138366 - 1138223
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| ||||||||| |  ||||||||||||||||||||||||  |||||  ||||||||||||| | ||   || | |||||| |||||||| | |||      
T  1138366 tactccctccgatcatatttataagaaaaaattgattttttaaattcattaaataattaatgta-tctagactagaaatagaccaaatacattaattatt 1138268  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    |||| || ||||||||| |||||||||||||||  ||||||||||    
T  1138267 caataaatcaaaaaagtaaattgtttcttataaataggaccggag 1138223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 35318666 - 35318522
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    ||||||||| | || ||||||||| |||||| ||||||||||||| ||| || ||||||||||||||| |  || || |||| ||||| |||||| | ||    
T  35318666 aaatacttctttcggtccttattacaagaaacaattgattttttaagtttattgaataattaatgtatctcgttataaatatggactagatacattattt 35318567  T
Q  101 acacaatgaaccaaaaaagtcaattgtttcttataataaggaccg 145  Q
    | ||||  |||  ||| ||| |||| |||||||||||||| ||||    
T  35318566 atacaacaaacttaaatagttaattatttcttataataagtaccg 35318522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 30132886 - 30132937
Alignment:
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| |||||    
T  30132886 acaatgaatcaaaaaagttaattgtttcttataataaggaccggagggagta 30132937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 13789863 - 13789730
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||| |||| || ||||| |||||||||||||| ||  |     || ||||| |||||||||| |||  ||||||| |||||||||     
T  13789863 ttataagaaaaagttgacttttcagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgcaatgaatcaaaaaagta 13789764  T
Q  122 aattgtttcttataataaggaccggagagagtat 155  Q
    || ||||||||||||  |||||||||| ||||||    
T  13789763 aaatgtttcttataaataggaccggagggagtat 13789730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 4527778 - 4527722
Alignment:
Q  80 tatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    ||||||||| |||||||||||||||||| |||  |||||||||||||||||| ||||    
T  4527778 tatagactagatacatcacttacacaataaacttaaaaagtcaattgtttctaataa 4527722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 73883 - 73934
Alignment:
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||||  ||||||||||||||||||||||||| |||||||| ||||||    
T  73883 caatgaacctgaaaagtcaattgtttcttataataaagaccggagggagtat 73934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 15968310 - 15968440
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  |||||||||||| || ||||||||| |||||  ||||||||||||| | ||   || | |||||| ||||||||||  ||      
T  15968310 tactacctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgta-tctagcctagaaatagaccaaatacatcaactatt 15968408  T
Q  104 caatgaaccaaaaaagtcaattgtttcttata 135  Q
    ||||||| ||||||||| ||||||||||||||    
T  15968409 caatgaatcaaaaaagtaaattgtttcttata 15968440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 22731408 - 22731258
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| ||||  |||||||||||| || ||||||||| |||||  |||||||||||||  | |   || | |||||| ||||||||||  ||     
T  22731408 atactacctccggtcctatttataagaaaaagttaattttttagattcattaaataattaatgtacct-agcctagaaatagaccaaatacatcaactat 22731310  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
     ||||||| ||||||||| ||||||||||||||   |||||||||| |||||    
T  22731309 tcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 22731258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 13932510 - 13932460
Alignment:
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||| |||||    
T  13932510 caatgaacataaaaagtcaattgtttcttataacaaggaccggagggagta 13932460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 22101925 - 22102039
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||||||||||| ||||| |  |||||||||||| || |   | |||||||  |||||||| | ||| ||||| || ||||||||||    
T  22101925 ttataagaaaaatttgattttttagattcattgtgtaattaatgtatcttgtctaaaatatagatcaaatacattatttatacaataaatcaaaaaagtc 22102024  T
Q  122 aattgtttcttataa 136  Q
    || | ||||||||||    
T  22102025 aaatatttcttataa 22102039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 155
Target Start/End: Original strand, 27488351 - 27488496
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatg 108  Q
    |||||| ||||  ||||||||||||||| ||||||||| |||||  ||||||| |||||| | |   || | |||||| ||||| ||||  ||   ||||    
T  27488351 cctccggtcctatttataagaaaaaattaattttttagattcattcaataattgatgtatct-agcctagaaatagaccaaatatatcaactattgaatg 27488449  T
Q  109 aaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    || ||||||||| ||||||||||||||   |||||||||||||||||    
T  27488450 aatcaaaaaagtaaattgtttcttatatataggaccggagagagtat 27488496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 29452043 - 29452001
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgatttttt 44  Q
    |||||| ||||||||||||||||||||||| ||||||||||||    
T  29452043 aatactccctccgatccttattataagaaacaattgatttttt 29452001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 33478181 - 33478258
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtatc 156  Q
    |||||| | |||||||||| |||  ||||||| |||||| ||||| ||||||||||||  |||||||||| |||||||    
T  33478181 atataggccaaatacatcatttatgcaatgaatcaaaaatgtcaaatgtttcttataaataggaccggagggagtatc 33478258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 8235508 - 8235460
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    ||||||||||||||||||||||||| || || ||||||||||| |||||    
T  8235508 ttataagaaaaaattgattttttagatttattgaataattaatatattt 8235460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 38978891 - 38978843
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||| ||||||||||||||||||||||| |||| ||||||| |||||||    
T  38978891 tactccctccgatccttattataagaaacaattaatttttttggttcat 38978843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 10228141 - 10228216
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||||| | |||||||| ||| |||||||| |||||||||||| ||||||| ||||  | |||||||| |||||    
T  10228141 atatagacgagatacatcatttatacaatgaatcaaaaaagtcaaatgtttctaataaataagaccggagggagta 10228216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 892562 - 892612
Alignment:
Q  20 tattataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    ||||||||| ||||||| | ||||||| ||||| |||||||||||||||||    
T  892562 tattataagcaaaaattcactttttagattcattgaataattaatgtattt 892612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 29031109 - 29031032
Alignment:
Q  81 atagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttata-ataaggaccggagagagtatcac 158  Q
    |||||| ||||||||||  ||  ||||||| ||||||||| |||||||||||||| |||| |||||||| |||||||||    
T  29031109 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataa-gaccggagggagtatcac 29031032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 1015228 - 1015155
Alignment:
Q  81 atagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||| ||||||||||  ||  ||||||| ||||||||| ||||||||||||||   |||||||||| |||||    
T  1015228 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 1015155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 3814102 - 3814057
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgta 67  Q
    ||||||||||||||||| ||||||| ||| | ||||||||||||||    
T  3814102 ttataagaaaaaattgactttttagattcgttgaataattaatgta 3814057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 5002214 - 5002145
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    |||||||  |||||||||| |||  |||| || |||||||||||| ||||||||||||  ||||||||||    
T  5002214 atatagatcaaatacatcatttatgcaattaatcaaaaaagtcaaatgtttcttataaataggaccggag 5002145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 7537171 - 7537122
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    ||||| |||||| |||||||||||| ||| |||||||||||| |||||||    
T  7537171 atactccctccggtccttattataaaaaacaattgatttttttggttcat 7537122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8717855 - 8717786
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    ||||||| |||||||||  ||||||||| ||||||  | |||||||||||||  ||||| ||||||||||    
T  8717855 aaatactccctccgatcactattataagcaaaaatcaaatttttaggttcattcaataaataatgtattt 8717786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 11931968 - 11932113
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaa-ttgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    |||| |||||| ||||  ||||||||||||| |||| ||||||| ||||| |  |||||||||||| || |   | |||||||| |||||||||| |||     
T  11931968 tactccctccggtcctatttataagaaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctaaaatatagaccaaatacatcatttat 11932067  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    | ||| || ||||||| | || |||||||| |||  ||||||||||    
T  11932068 ataataaatcaaaaaaattaaatgtttcttttaaataggaccggag 11932113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 14913257 - 14913164
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacat 95  Q
    |||||| | |||||||||  |||||||||||| |||||||||||  ||||| || |||||||| ||||| ||   | |||||||| ||||||||    
T  14913257 aatactccttccgatcctatttataagaaaaatttgattttttaaattcattgagtaattaatatatttgatataaaatatagaccaaatacat 14913164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 18473549 - 18473606
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    |||||||  |||| ||||| ||| |||||||| |||||||||||| ||||||||||||    
T  18473549 atatagatcaaatgcatcatttatacaatgaatcaaaaaagtcaaatgtttcttataa 18473606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 19211319 - 19211278
Alignment:
Q  114 aaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||  ||||||||||||||||||||||| ||||||    
T  19211319 aaaaagtcaaaagtttcttataataaggaccggagggagtat 19211278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 27600900 - 27600867
Alignment:
Q  11 tccgatccttattataagaaaaaattgatttttt 44  Q
    ||||||||||||||||||||| ||||||||||||    
T  27600900 tccgatccttattataagaaataattgatttttt 27600867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30132838 - 30132883
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttag 46  Q
    ||||||| |||||| ||||||||||||||||||||| | |||||||    
T  30132838 aaatactccctccggtccttattataagaaaaaattaactttttag 30132883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 30132881 - 30132840
Alignment:
Q  114 aaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| |||| |||||||||||||||||||||| ||||||    
T  30132881 aaaaagttaattttttcttataataaggaccggagggagtat 30132840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 5240237 - 5240285
Alignment:
Q  20 tattataagaaaaaattgattttttaggttcatagaataattaatgtat 68  Q
    ||||||||| |||| |||||||||||| | ||| |||||||||||||||    
T  5240237 tattataagcaaaatttgattttttagatacattgaataattaatgtat 5240285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 8680690 - 8680642
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||| |||||| |||||||||||||||| | |||| |||||||||||||    
T  8680690 tactccctccggtccttattataagaaacatttgactttttaggttcat 8680642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 29002741 - 29002789
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||| |||||||||||| |||||||||| |||||| ||||| |||||||    
T  29002741 tactccctccgatccttgttataagaaacaattgacttttttggttcat 29002789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 54864062 - 54864207
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||     
T  54864062 atactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttat 54864161  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  54864162 acaatgaaccaaaaaagttaattgtttcttataataaggaccggag 54864207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 36196516 - 36196364
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| || ||||||| ||||||||||||    
T  36196516 aatactccctccggtccttattataagaaaaaattgattttttagattcatagaataattaatgtatcttattgtaaatgtagactatatacatcactta 36196417  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
     | |||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  36196416 taaaatgaaccaaaaaaatcaattgtttcttataataaggaccggagggagta 36196364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 33623031 - 33622878
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||| ||||| |||| ||||||||| ||    
T  33623031 aatactccctccgatccctattataagaaaaaattgactttttacgttcatagaataattaatgtatcttattgtaaatataaactagatacatcaccta 33622932  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
     |||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  33622931 tacaatgaaccaaaaaagttaattgtttcttataataaggaccggagggagtat 33622878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 43141916 - 43141771
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    |||||||||||| || ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||||| || ||||||||||||     
T  43141916 atacttcctccggtctttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagattagatacatcacttat 43141817  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  43141816 acaatgaaccaaaaaagttaattgtttcttataataaggaccggag 43141771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 37895406 - 37895254
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| |||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||||||||    
T  37895406 aatactccctccggtccttattataagaaaaagttgactttttagattcatagaataattaatgtattttattgtaaatgtagactagatacatcactta 37895307  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
     |||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  37895306 tacaatgaaccaaaaaaatcaactgtttcttataataaggaccggagggagta 37895254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 32193625 - 32193474
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    |||||||||||| |||||||||||||||||  ||||||||||| |||||||||||||||||||||  |||||  | |||||||||| |||||| ||||||    
T  32193625 atacttcctccggtccttattataagaaaacgttgattttttaagttcatagaataattaatgtaccttattagaaatatagactagatacattacttac 32193526  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    | |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32193525 ataatgaaccaaaaaagtcaattgtttcttataataaggaccggagggagta 32193474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 35877312 - 35877451
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| |||||||||||||||||| |||| ||||||| ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||    
T  35877312 atactccctccggtccttattataagaaaaagttgactttttagattcatagaataattaatgtatcttattgtaaatatagtctaaatacatcacttac 35877411  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataagga 142  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  35877412 acaatgaaccaaaaaaattaattgtttcttataataagga 35877451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 43556836 - 43556689
Alignment:
Q  9 cctccgatccttattataagaaaaaa-ttgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaat 107  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| || ||||||| |||| ||||||||||||     
T  43556836 cctccggtccttattataagaaaaaaattgattttttaggttcatagaataattaatgtatcttattgtaaatgtagactagatacgtcacttacacaac 43556737  T
Q  108 gaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  43556736 gaactaaaaaaatcaattgtttcttataataaggaccggagggagtat 43556689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 4418101 - 4418246
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatg 108  Q
    |||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||    
T  4418101 cctccggtccttattataagaaacaattgatttttttagttcatagaataattaatgtattttgttataaatataaactaaatacatcacttacacaatg 4418200  T
Q  109 aaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||| ||||| |||||| |||||||||||||||||||||| |||||    
T  4418201 aacctaaaaaatcaattttttcttataataaggaccggagggagta 4418246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 50511390 - 50511251
Alignment:
Q  8 tcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaat 107  Q
    ||||||| |||||||||||||||||| |||| | ||||| || |||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  50511390 tcctccggtccttattataagaaaaagttgactctttagatttatagaataattaatgtatcttattgtaaatatagtctaaatacatcacttacacaat 50511291  T
Q  108 gaaccaaaaaagtcaattgtttcttataataaggaccgga 147  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  50511290 gaaccaaaaaagttaattgtttcttataataaagaccgga 50511251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 52136836 - 52136698
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||||| || || || |||||||||||||||||||||||||||||||||| ||    
T  52136836 tccttattataagaaacaattgatttttttagttcatagaataattaatgtatcttgttataaatatagactaaatacatcacttacacaatgaacctaa 52136737  T
Q  116 aaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||| |||| |||||||||||||||||||||| |||||    
T  52136736 aaagttaattttttcttataataaggaccggagggagta 52136698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 10 - 154
Target Start/End: Original strand, 25874704 - 25874849
Alignment:
Q  10 ctccgatccttattataagaaaaaatt-gattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatg 108  Q
    ||||| |||||||||||| |||||| | |||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  25874704 ctccggtccttattataaaaaaaaaatagattttttagattcatagaataattaatgtattttattgtaaatatagactagatacatcacttatacaatg 25874803  T
Q  109 aaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||||||| | |||| |||||||||||||||||||||| |||||    
T  25874804 aaccaaaaaaattaattctttcttataataaggaccggagggagta 25874849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 35929007 - 35929159
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||| |||||||  || ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| || ||||||| || ||||||||||||    
T  35929007 aatatttcctcccgtctttattataagaaaaagttgattttttaggtttatagaataattaatgtatcttattataaatatagattagatacatcactta 35929106  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| |||||||||    
T  35929107 cacaatgaaccaaaaaa-tcaattgtttcttataataatgaccgaagagagtat 35929159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 8347641 - 8347498
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||| |||||||||| |||||||| ||| |    
T  8347641 tactccctccggtccttattataagaaaaagttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcatttata 8347542  T
Q  104 caatgaaccaa-aaaagtcaattgtttcttataataaggaccgg 146  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||    
T  8347541 caatgaaccaaaaaaaatcaaatgtttcttataataaggaccgg 8347498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 33615778 - 33615929
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||||||||||||||   |||||||||||| ||||| || |||||||||||| |||||||| |||||||||| ||||||||||||||    
T  33615778 tactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttattgtaaatatagactagatacatcacttaca 33615877  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| | ||||| |||||||||| |||||||||||||||||| ||||||    
T  33615878 caatgaatctaaaaattcaattgttttttataataaggaccggagggagtat 33615929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 29686550 - 29686398
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| |||||||||||||||| |||| ||||||||  ||||| | ||||||||||||| || || || |||||||||| |||||||| ||||    
T  29686550 atactccctccggtccttattataagaaacaattaattttttaaattcattgtataattaatgtatattgttataaatatagactagatacatcatttac 29686451  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||||| |||||||||| |||||||||||||||||||||||| ||||||    
T  29686450 acaatgaacctaaaaagtcaaatgtttcttataataaggaccggagggagtat 29686398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 42159978 - 42160116
Alignment:
Q  10 ctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatga 109  Q
    ||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||| || || || ||||||||||||||||||||||||| |||||    
T  42159978 ctccggtccttattataagaaataattgattttttttgttcatagaataattaatgtatcttgttataaatatagactaaatacatcacttacataatga 42160077  T
Q  110 accaaaaaagtcaattgtttcttataataaggaccggag 148  Q
      | |||||||||| ||||||||||||||| ||||||||    
T  42160078 ttctaaaaagtcaaatgtttcttataataaagaccggag 42160116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 25756862 - 25756711
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| |||||||||||||||| |||||| |||||| |||||| | ||||||||||||| |  || || ||| |||||| |||||||||||||    
T  25756862 atactccctccggtccttattataagaaacaattgactttttatgttcattggataattaatgtatctcgttataaatagagactagatacatcacttac 25756763  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||| |||||| |||||||||||| |||||||||||||||||||||| |||||    
T  25756762 acagtgaacctaaaaagtcaattatttcttataataaggaccggagggagta 25756711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 27587396 - 27587251
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||| |  || || ||||| |||| |||||||| |||     
T  27587396 atactacctccgatccttattataagaaataatttattttttaggttcattgaataattaatgtatctcgttataaatatacactagatacatcatttat 27587297  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    | ||| || | |||||||||||||||||||||||||||||||||||    
T  27587296 ataataaatctaaaaagtcaattgtttcttataataaggaccggag 27587251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 31853066 - 31853206
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| ||| ||||| ||||||||||||| ||||||||||||   ||||||||||||||||||||| || || || |||||||||| ||||||||||||||    
T  31853066 tactcccttcgatctttattataagaaataattgatttttttaattcatagaataattaatgtatcttgttataaatatagactagatacatcacttaca 31853165  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggacc 144  Q
    ||||||||| |||||||||| | ||||||||||||| ||||    
T  31853166 caatgaacctaaaaagtcaaatttttcttataataaagacc 31853206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 54673315 - 54673448
Alignment:
Q  10 ctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatga 109  Q
    ||||| |||||||||||||||| | |||| ||||||||||||| |||||| ||||| || |  || || |||||||||| |||||||||||||| |||||    
T  54673315 ctccggtccttattataagaaacatttgactttttaggttcattgaataagtaatgcatctcgttataaatatagactagatacatcacttacataatga 54673414  T
Q  110 accaaaaaagtcaattgtttcttataataaggac 143  Q
    ||| ||||||||||||||||||||||||||||||    
T  54673415 acctaaaaagtcaattgtttcttataataaggac 54673448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 52966532 - 52966409
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||| |||||| ||||| |||||||||||||||||||| || || || || |||||||||| |||||||||||| |||||||||  ||    
T  52966532 tccttattataagaaacaattgacttttttggttcatagaataattaatgcatcttgttataaatatagactagatacatcacttatacaatgaacttaa 52966433  T
Q  116 aaagtcaattgtttcttataataa 139  Q
    |||||||| | |||||||||||||    
T  52966432 aaagtcaaatttttcttataataa 52966409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 56491209 - 56491072
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    ||||||||||||| || || ||| |||||| |||||| ||||||||||||||  |  || || |||||||||| |||||| ||||| |||||||||| ||    
T  56491209 tccttattataagcaacaaatgactttttaagttcattgaataattaatgtacctcgttataaatatagactagatacattacttatacaatgaacctaa 56491110  T
Q  116 aaagtcaattgtttcttataataaggaccggagagagt 153  Q
    ||||||||||| | ||||||||||||||||||| ||||    
T  56491109 aaagtcaattgctgcttataataaggaccggagggagt 56491072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 10 - 148
Target Start/End: Complemental strand, 19350753 - 19350617
Alignment:
Q  10 ctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatga 109  Q
    ||||| ||||||||| || ||||| |||| |||||||||| |||||||| ||||||| | ||||| || ||| |||||| |||| |||||||||||||||    
T  19350753 ctccggtccttattaaaaaaaaaagttgactttttaggtttatagaatacttaatgt-tcttattataaataaagactagatac-tcacttacacaatga 19350656  T
Q  110 accaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    ||||||||| | |||||||||||||||||| || |||||    
T  19350655 accaaaaaaattaattgtttcttataataaagatcggag 19350617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 52278101 - 52277989
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatac--atcacttacacaatgaaccaaaa 116  Q
    |||||||||||||||||||| ||||||| || |||||||||||||| ||| |||||||| |||||||||||||||  |||||||| | |||||| |||||    
T  52278101 ttattataagaaaaaattgactttttagatttatagaataattaatatatcttattgtaaatatagactaaatacatatcacttatataatgaatcaaaa 52278002  T
Q  117 aagtcaattgttt 129  Q
    |||| | ||||||    
T  52278001 aagttatttgttt 52277989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 9813608 - 9813468
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    |||||||||||||||||||||| ||||| || |||||| |||||||||| || | || ||||||| || |  || || |||||||||| |||||||||||    
T  9813608 aaatacttcctccgatccttataataagcaacaattgactttttaggtttattgcatgattaatgcatctcgttataaatatagactagatacatcactt 9813509  T
Q  101 acacaatgaacc-aaaaaagt-caattgtttcttataataa 139  Q
    |||||||||||| |||||||| ||||||||  |||||||||    
T  9813508 acacaatgaacctaaaaaagtacaattgttgattataataa 9813468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 50511559 - 50511471
Alignment:
Q  21 attataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatga 109  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||| ||||||||||||    
T  50511559 attataagaaaaagttgactctttaggttcatagaataattaatgtatcttattgtaaatataaactagatacatcccttacacaatga 50511471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 155
Target Start/End: Original strand, 28460761 - 28460896
Alignment:
Q  20 tattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaag 119  Q
    ||||||||||||   |||||||||||| |||||    |||||||| ||| || ||||| ||||||||||||||||||||||| | |||||| | ||||||    
T  28460761 tattataagaaatttttgattttttagattcattatgtaattaatttatcttgttgtaaatatagactaaatacatcacttatataatgaatctaaaaag 28460860  T
Q  120 tcaattgtttcttataataaggaccggagagagtat 155  Q
     |||||||||||||||||||| | ||||| ||||||    
T  28460861 ccaattgtttcttataataagaatcggagggagtat 28460896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 40 - 139
Target Start/End: Complemental strand, 40592825 - 40592726
Alignment:
Q  40 tttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataa 139  Q
    |||||||||| |||||||||||||||||| || || || ||||| |||| |||||||||||| |||||||| | ||||||| ||||||||||||||||||    
T  40592825 tttttaggtttatagaataattaatgtatcttgttataaatataaactagatacatcacttatacaatgaatccaaaaagttaattgtttcttataataa 40592726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 38208314 - 38208399
Alignment:
Q  70 ttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||| | |||||||||| |||||||||||| ||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||    
T  38208314 ttattgaaaatatagactagatacatcacttaaacaatgaactaaaaatgtcaattgtttcttatattaaggaccggagggagtat 38208399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 1100967 - 1100901
Alignment:
Q  82 tagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    ||||||| |||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||    
T  1100967 tagactagatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataaggaccggag 1100901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 1205131 - 1205232
Alignment:
Q  54 gaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagt 153  Q
    ||||||||||||||| ||||| || |||||||||| |||||||||||| ||||||||   ||||| |||||| ||||||||||||| || ||||| ||||    
T  1205131 gaataattaatgtatcttattataaatatagactagatacatcacttagacaatgaatataaaaaatcaattttttcttataataaagatcggagggagt 1205230  T
Q  154 at 155  Q
    ||    
T  1205231 at 1205232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 4418246 - 4418102
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatata-gactaaatacatcacttac 102  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||| |  ||| | ||||| |||| | || || ||  || |||||||| | |||     
T  4418246 tactccctccggtccttattataagaaaaaattgattttttaggttcattgtgtaagtgatgta-tttagtttatatttataacaaaatacattaattat 4418148  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
     | |||||| |||||| |||||||||||||||||||||||||||||    
T  4418147 tctatgaactaaaaaaatcaattgtttcttataataaggaccggag 4418102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 24100758 - 24100851
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatca 97  Q
    |||| ||||||||||||||||||||||| |||| | ||||||| ||||| ||||||||||||||| || || || |||||||||| ||||||||    
T  24100758 tactccctccgatccttattataagaaataattaactttttagattcattgaataattaatgtatcttgttataaatatagactagatacatca 24100851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 30191913 - 30192046
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    ||||||||||||||||||||||||| ||||| || ||||| ||||||||| |     |||||||| |||||||||| |||  ||||||| |||||||||     
T  30191913 ttataagaaaaaattgattttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaagtt 30192012  T
Q  122 aattgtttcttataataaggaccggagagagtat 155  Q
    || ||||||||||||  | |||||||| ||||||    
T  30192013 aaatgtttcttataaatacgaccggagggagtat 30192046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 148
Target Start/End: Complemental strand, 50511470 - 50511393
Alignment:
Q  71 tattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    ||||||| ||||| |||| | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  50511470 tattgtaaatataaactagacacatcccttacacaatgaactaaaaaagtcaagtgtttcttataataaggaccggag 50511393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 48361049 - 48361201
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| ||||  |||||||||||| |||| ||||||| ||||| || ||||| ||||||||| |     |||||||| |||||||||| |||    
T  48361049 aatactccctccggtcctatttataagaaaaatttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcattta 48361148  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
      ||||||| |||||||||||| ||||||||||||  ||||| |||| |||||    
T  48361149 tgcaatgaatcaaaaaagtcaaatgtttcttataaataggacaggagggagta 48361201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 1140879 - 1140980
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaa 118  Q
    |||||| || ||| |||||| ||||||| ||||| |||||||| ||||||||| || || |||||||| | ||||||||||||||||||||| | |||||    
T  1140879 ttattagaataaacaattgaatttttagattcattgaataattgatgtattttgttataaatatagaccagatacatcacttacacaatgaatctaaaaa 1140978  T
Q  119 gt 120  Q
    ||    
T  1140979 gt 1140980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 7086216 - 7086273
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccgga 147  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||    
T  7086216 atacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataataaggaccgga 7086273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 22020085 - 22019930
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    |||||||||||| ||||||||| ||||| || | |||| ||||||| || ||   |||||||||| || |  || || ||||||| || | |||||||||    
T  22020085 aaatacttcctctgatccttat-ataagtaacagttgactttttagattaattagataattaatgcatctcgttataaatatagattagacacatcactt 22019987  T
Q  101 acacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtatca 157  Q
    ||| |||||| | ||||||| ||||||| ||||||||||||||||||  ||||||||    
T  22019986 acagaatgaatctaaaaagttaattgttacttataataaggaccggatggagtatca 22019930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 36132766 - 36132633
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    ||||||||||||||||| |||| || | ||| || || || |||||| || |  |  ||||||||||||||||||| ||| |||||||| ||||||||||    
T  36132766 ttataagaaaaaattgacttttaagatacattgagtagttgatgtatcttgtcttgaatatagactaaatacatcatttatacaatgaatcaaaaaagtc 36132667  T
Q  122 aattgtttcttataataaggaccggagagagtat 155  Q
    || | ||||||||||  ||||| |||| ||||||    
T  36132666 aaatatttcttataaataggactggagggagtat 36132633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 44111876 - 44111743
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||| ||||||| ||||| || ||||| |||||| || ||    |||||||| |||||||||| |||   ||| || ||||||||||    
T  44111876 ttataagaaaaagttgactttttagattcattgagtaattgatgtatcttctttagaatatagaccaaatacatcatttatgtaattaatcaaaaaagtc 44111777  T
Q  122 aattgtttcttataataaggaccggagagagtat 155  Q
    || ||||||||||||  |||||||||| ||||||    
T  44111776 aaatgtttcttataaataggaccggagggagtat 44111743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 48195964 - 48196033
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    |||||||| |||||||||| |||  |||||||||||||||||||| ||||||||||||  ||||||||||    
T  48195964 atatagaccaaatacatcatttatgcaatgaaccaaaaaagtcaaatgtttcttataaataggaccggag 48196033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 52966496 - 52966536
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccgg 146  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  52966496 atgaaccaaaaaagtcaattgtttcttataataaggaccgg 52966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 23559051 - 23558952
Alignment:
Q  8 tcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaat 107  Q
    ||||||| || |||||||||| || ||||||||||||||| |||| | ||||||||| ||| |  || || |||||||||| |||||||| |||||||||    
T  23559051 tcctccggtctttattataagtaacaattgattttttaggctcattggataattaatatatctcgttataaatatagactagatacatcagttacacaat 23558952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 25756811 - 25756862
Alignment:
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  25756811 caatgaacataaaaagtcaattgtttcttataataaggaccggagggagtat 25756862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 53225794 - 53225727
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    ||||| |||||| ||||  ||||||||||||||||| ||||||| ||||| |||||||||||||||||    
T  53225794 atactccctccggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtattt 53225727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 8347662 - 8347776
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||| ||||||| ||||| || | ||| ||||||||| |   | ||||||||  ||||||||| ||| ||||||||  |||||||||    
T  8347662 ttataagaaaaatttgactttttagattcattgagtgattgatgtattttgtataaaatatagaccgaatacatcatttatacaatgaataaaaaaagtc 8347761  T
Q  122 aattgtttcttataa 136  Q
    || ||||||||||||    
T  8347762 aaatgtttcttataa 8347776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 54673359 - 54673313
Alignment:
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagag 150  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  54673359 caatgaacctaaaaagtcaaatgtttcttataataaggaccggagag 54673313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1205234 - 1205190
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgatttttta 45  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||    
T  1205234 aaatactccctccgatctttattataagaaaaaattgatttttta 1205190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 36196364 - 36196515
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaa-atacatcacttac 102  Q
    |||| |||||| |||||||||||||||| |||||||||||| |||||||   |||| | ||||| | || | ||||| || | ||| |||||| | |||     
T  36196364 tactccctccggtccttattataagaaacaattgatttttttggttcattttataagtgatgta-tatagtctacatttacaataagatacattaattat 36196462  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
     | ||||| | ||||| |||||| |||||||||||||||||||||| ||||||    
T  36196463 tctatgaatctaaaaaatcaattttttcttataataaggaccggagggagtat 36196515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 37895254 - 37895405
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaa-tacatcacttac 102  Q
    |||| |||||| |||||||||||||||| | |||||||||| ||||||| | |||| | |||||| | | | ||||| || | |||| ||||| | |||     
T  37895254 tactccctccggtccttattataagaaacagttgatttttttggttcattgtataagtgatgtatct-agtctacatttacaataaaatacattaattat 37895352  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
     | ||||| | |||||||||| | |||||||||||||||||||||| ||||||    
T  37895353 tctatgaatctaaaaagtcaactttttcttataataaggaccggagggagtat 37895405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 45828546 - 45828498
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    ||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  45828546 ttataagaaaaaattgattttttagattcattgagtaattaatgtattt 45828498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 55190816 - 55190685
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| ||||  ||||||||||||||||||||||||  |||||  ||||||| ||||| | ||   || | |||||| |||||||||| |||     
T  55190816 atactacctccggtcctatttataagaaaaaattgattttttatattcattcaataattgatgta-tctagcctagaaatagaccaaatacatcaattat 55190718  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttata 135  Q
     || |||| ||||||||| ||||||||||||||    
T  55190717 ccactgaatcaaaaaagtaaattgtttcttata 55190685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 4386153 - 4386267
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtaca-tatagactaaatacatcacttacacaatgaaccaaaaaagt 120  Q
    |||||||||||| |||| ||||||  |||||  | ||||| |||||||||||  |||| |||||||||||||||||| |||   |||||| |||||||||    
T  4386153 ttataagaaaaatttgactttttaaattcattaagtaattgatgtattttatc-tacaatatagactaaatacatcatttatgtaatgaatcaaaaaagt 4386251  T
Q  121 caattgtttcttataa 136  Q
    ||| | ||||||||||    
T  4386252 caaatttttcttataa 4386267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 19350608 - 19350659
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||| |||||||    
T  19350608 aaatacttcctccgatctttattataagaaacaattaatttttttggttcat 19350659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 22210803 - 22210872
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagacta 88  Q
    ||||||||||||| |||||| ||||||  ||||| ||||||||||| ||| || ||||| ||||||||||    
T  22210803 ttattataagaaacaattgactttttaaattcattgaataattaatatatcttgttgtaaatatagacta 22210872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 24100942 - 24100889
Alignment:
Q  15 atccttattataagaaaaaattgattttttaggttcatagaataattaatgtat 68  Q
    ||||||||||||||||| |||| | ||||||| ||||| |||||||||||||||    
T  24100942 atccttattataagaaataattaactttttagattcattgaataattaatgtat 24100889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 32714343 - 32714286
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    ||||||||||||||||||| |||   |||||| |||||||||||| ||||||||||||    
T  32714343 atatagactaaatacatcatttatgtaatgaatcaaaaaagtcaaatgtttcttataa 32714286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 47943744 - 47943877
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    ||||| ||||||||||| ||||||| || || || ||||||||||| ||  |   | ||||||||||||||||||| |||  ||||||| |||||| |||    
T  47943744 ttatatgaaaaaattgactttttagattaattgagtaattaatgtacttggtataaaatatagactaaatacatcatttatgcaatgaatcaaaaatgtc 47943843  T
Q  122 aattgtttcttataataaggaccggagagagtat 155  Q
    || ||||  ||||||  | |||||||| ||||||    
T  47943844 aaatgttatttataaataagaccggagggagtat 47943877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 54864111 - 54864062
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| |||||||||| | |||||||||||||||||||||| ||||||    
T  54864111 atgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 54864062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 8347593 - 8347641
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||||| |||||||||| | |||||||||||||||||||||| |||||    
T  8347593 atgaacctaaaaagtcaactttttcttataataaggaccggagggagta 8347641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 21554239 - 21554126
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtatt-ttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagt 120  Q
    |||||||||||| |||||||||||| ||||| || |||||||||||||  ||| |   |||||||| |||||||||| |||  ||||||| | |||||||    
T  21554239 ttataagaaaaagttgattttttagattcattgagtaattaatgtattgatatag--aatatagaccaaatacatcatttatgcaatgaatcgaaaaagt 21554142  T
Q  121 caattgtttcttataa 136  Q
    ||| | ||| ||||||    
T  21554141 caaatattttttataa 21554126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 42160020 - 42159972
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||| |||||| |||||| |||||||||||||||||||||| |||||    
T  42160020 atgaacaaaaaaaatcaattatttcttataataaggaccggagtgagta 42159972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 43117985 - 43117937
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    ||||||||||||||||||||||||  ||||| |||||||| ||||||||    
T  43117985 ttataagaaaaaattgattttttacattcattgaataattgatgtattt 43117937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 52136698 - 52136837
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttat-tgtacatatagactaaatacatcacttac 102  Q
    |||| |||||| ||||||||||||||||||||| | ||||||||||||| |  ||| | ||||||||  | | ||  |||| || | |||||| | |||     
T  52136698 tactccctccggtccttattataagaaaaaattaactttttaggttcattgtgtaagtgatgtatttagtctatatttata-acaagatacattaattat 52136796  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggac 143  Q
     | |||||| |||||| ||||||||||||||||||||||||    
T  52136797 tctatgaactaaaaaaatcaattgtttcttataataaggac 52136837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 23208777 - 23208647
Alignment:
Q  10 ctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacat-atagactaaatacatcacttacacaatg 108  Q
    ||||| |||||||||||||||| |||| ||||||||||||  | |||||| | || ||| | ||  || || ||| | ||||||||||| ||| ||||||    
T  23208777 ctccggtccttattataagaaagaattcattttttaggttagttgaataactgatatatctgatc-tatattataaattaaatacatcaattatacaatg 23208679  T
Q  109 aaccaaaaaagtcaattgtttcttataataag 140  Q
    |||| ||||||| |||||||| | ||||||||    
T  23208678 aacctaaaaagttaattgtttttcataataag 23208647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 25756711 - 25756758
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttca 51  Q
    |||| |||||| |||||||||||||||| |||||| ||||||||||||    
T  25756711 tactccctccggtccttattataagaaataattgactttttaggttca 25756758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 114 - 157
Target Start/End: Complemental strand, 35877353 - 35877310
Alignment:
Q  114 aaaaagtcaattgtttcttataataaggaccggagagagtatca 157  Q
    |||||||||| | |||||||||||||||||||||| ||||||||    
T  35877353 aaaaagtcaactttttcttataataaggaccggagggagtatca 35877310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 3162912 - 3163026
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    ||||||||||||||||| ||||||  ||||| |  |||||||| ||| || |     ||||||||| ||||||||| |||  ||||||| ||||||||||    
T  3162912 ttataagaaaaaattgactttttaaattcattgtgtaattaatatatcttgtctagaatatagactcaatacatcatttatgcaatgaatcaaaaaagtc 3163011  T
Q  122 aattgtttcttataa 136  Q
    || ||||| ||||||    
T  3163012 aaatgttttttataa 3163026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 16412233 - 16412299
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    ||||||||||| | ||  ||||||||||||||||| ||||||| ||||| |||||||| || |||||    
T  16412233 tacttcctccggttctatttataagaaaaaattgactttttagattcattgaataattgatatattt 16412299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 20459313 - 20459239
Alignment:
Q  81 atagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||| ||||||||||  ||  ||||||| ||||||||| ||||||||||||||   ||||||||| |||||||    
T  20459313 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggatagagtat 20459239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 29686397 - 29686550
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttat-tgtacatatagactaaatacatcactt 100  Q
    |||||| |||||| |||||||||||||||| | |||| ||||||||||||| |  ||| | |||||| |  | | ||  |||| || | |||||| | ||    
T  29686397 aatactccctccggtccttattataagaaacatttgactttttaggttcattgtgtaaatgatgtatctagtctatatttata-acaatatacattaatt 29686495  T
Q  101 acacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    | ||||||||   ||||| | ||||||||||||||||||||||||||| ||||||    
T  29686496 atacaatgaatttaaaaaattaattgtttcttataataaggaccggagggagtat 29686550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 43556688 - 43556730
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgatttttt 44  Q
    |||||| |||||| |||||||||||||||| ||||||||||||    
T  43556688 aatactccctccggtccttattataagaaacaattgatttttt 43556730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 13976850 - 13976915
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||| |||| || |||||| |||||||||||||||||||| ||  ||||||| ||| |||||    
T  13976850 atacatcaattacccagtgaacctaaaaagtcaattgtttcttagaaataggaccgcagatagtat 13976915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 22210926 - 22210877
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||||||| | ||| |||||||||||||| |||| |||||||||||||||    
T  22210926 atacttcccctgattcttattataagaaacaatttattttttaggttcat 22210877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 42169174 - 42169073
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||| ||||||| || || |||||||| ||||||||| |  |  |||| ||| |||||||||| |||   |||||| ||||||||||    
T  42169174 ttataagaaaaatttgactttttagatttattgaataattgatgtattttgtcttgaatatggaccaaatacatcatttatgtaatgaatcaaaaaagtc 42169075  T
Q  122 aa 123  Q
    ||    
T  42169074 aa 42169073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 47866111 - 47866184
Alignment:
Q  81 atagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||| ||||||||||  ||  ||||||| ||||||||| ||||||||||||||   |||||||||| |||||    
T  47866111 atagaccaaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggaccggagggagta 47866184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 50225361 - 50225316
Alignment:
Q  97 acttacacaatgaaccaaaaaagtcaattgtttcttataataagga 142  Q
    ||||||||||||||   |||||||||| ||||||||||||||||||    
T  50225361 acttacacaatgaatttaaaaagtcaactgtttcttataataagga 50225316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 140
Target Start/End: Original strand, 22210871 - 22210911
Alignment:
Q  100 tacacaatgaaccaaaaaagtcaattgtttcttataataag 140  Q
    ||||||||||||| ||||| | |||||||||||||||||||    
T  22210871 tacacaatgaacctaaaaaataaattgtttcttataataag 22210911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 25874849 - 25874801
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||| |||||| |||||||||||||||| |||| ||||||| |||||||    
T  25874849 tactccctccggtccttattataagaaagaattaatttttttggttcat 25874801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 27587243 - 27587287
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttag 46  Q
    |||| |||||||| |||||||||||||||| |||||| |||||||    
T  27587243 aatatttcctccggtccttattataagaaacaattgactttttag 27587287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 32193474 - 32193522
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||| |||||| |||||||||||||||| |||||| ||||| |||||||    
T  32193474 tactccctccggtccttattataagaaacaattgacttttttggttcat 32193522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 33615842 - 33615778
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||| | |||| ||||||| | ||||| ||||  ||||||||||||||||||||||| |||||    
T  33615842 atacattaattactcaatgaatctaaaaaatcaaaagtttcttataataaggaccggagggagta 33615778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 35877455 - 35877415
Alignment:
Q  12 ccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||||||||||||||||||| |||| ||||||| |||||||    
T  35877455 ccgatccttattataagaaacaattaatttttttggttcat 35877415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 42804254 - 42804405
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| ||||  |||||||||||| || | ||||||| |||||  ||||||| |||||  | ||| || | |||||| ||||||||||  ||     
T  42804254 atactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaatt-tagaaatagaccaaatacatcaactat 42804352  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
      |||||| ||||||| | ||||||||||||||   |||||||||| ||||||    
T  42804353 ttaatgaatcaaaaaaataaattgtttcttatatataggaccggagggagtat 42804405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 47949090 - 47949022
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    |||||| | ||||||||| ||||||||| ||| |||||||||||| | ||| |||||||  ||||||||    
T  47949090 aatactccttccgatcctaattataagagaaagttgattttttagatacattgaataatgtatgtattt 47949022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 54673447 - 54673411
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcat 52  Q
    |||||||||||||||| |||||| |||||||||||||    
T  54673447 tccttattataagaaacaattgactttttaggttcat 54673411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 4e-54; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 45113884 - 45113745
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  45113884 atactccctccggtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttac 45113785  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataagga 142  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  45113784 acaatgaaccaaaaaaatcaattgtttcttataataagga 45113745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 27302228 - 27302077
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    ||||||||||| || ||||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||| |    
T  27302228 tacttcctccggtctttattataagaaaaagttgactttttaggttcatagaataattaatgtatctaattgtaaatatagactagatacatcacttata 27302129  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  27302128 caatgaaccaaaaaagttaattctttcttataataaagaccggagagagtat 27302077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 43901590 - 43901724
Alignment:
Q  14 gatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaacca 113  Q
    ||||||||||||| |||||| |||| ||||||||||||||||||||||||||||| |||||| | ||||||||||  ||||||| |||||||||||||||    
T  43901590 gatccttattatatgaaaaagttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactaggtacatcatttacacaatgaacca 43901689  T
Q  114 aaaaagtcaattgtttcttataataaggaccggag 148  Q
    ||||||| |||||||||||||||||||||||||||    
T  43901690 aaaaagttaattgtttcttataataaggaccggag 43901724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 31376325 - 31376173
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| ||||||||| |||||| |||||| ||||| ||||||||||||||||||||||| || || || |||||||||| |||||||||||||    
T  31376325 atactccctccggtccttattacaagaaacaattgacttttttggttcatagaataattaatgtatcttcttataaatatagactagatacatcacttac 31376226  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    | |||||||| |||||||||| |||||||||||||||||||||||| ||||||    
T  31376225 ataatgaacctaaaaagtcaaatgtttcttataataaggaccggagggagtat 31376173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 53284327 - 53284459
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||||| |||||||||||| |||||| |||||||||||||| |||||||| || ||||||| |||||||||||| ||||| |||||||    
T  53284327 tccttattataagaaaaagttgattttttagtttcataaaataattaatgtatcttattgtaaatgtagactagatacatcacttatacaataaaccaaa 53284426  T
Q  116 aaagtcaattgtttcttataataaggaccggag 148  Q
    ||| |||||||||||||||||||||||||||||    
T  53284427 aaaatcaattgtttcttataataaggaccggag 53284459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 53703726 - 53703881
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    ||||||| |||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||||||| || || || |||||||||| |||||||||||    
T  53703726 aaatactccctccggtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcactt 53703825  T
Q  101 acacaatgaaccaaaaaagtcaa-ttgtttcttataataaggaccggagagagtat 155  Q
    |||||||||||| |||| ||||| || |||||||||||||||||||||| ||||||    
T  53703826 acacaatgaacctaaaaggtcaacttttttcttataataaggaccggagggagtat 53703881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 39617062 - 39616910
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| ||||||||| |||||| |||||| ||||| ||||||||||||||||||||||| || || || |||||||||| ||||||||||||    
T  39617062 aatactccctccggtccttattacaagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcactta 39616963  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    || ||||||||  ||||||||| |||||||||||||||||||||||| |||||    
T  39616962 cataatgaaccttaaaagtcaaatgtttcttataataaggaccggagggagta 39616910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 134
Target Start/End: Original strand, 21944295 - 21944418
Alignment:
Q  11 tccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaa 110  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| |||||||||| ||||| ||||||||||| |||    
T  21944295 tccggtccttattataagaaaaaattgactttttaggttcatagaataattaatgtatcttagtgtagatatagactagatacaccacttacacaaggaa 21944394  T
Q  111 ccaaaaaagtcaattgtttcttat 134  Q
    |||||||| |||||||||||||||    
T  21944395 ccaaaaaaatcaattgtttcttat 21944418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 4 - 145
Target Start/End: Original strand, 16123756 - 16123896
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||| ||| |||||||||| ||| |||||||| |||||||||| |||||| ||||| |    
T  16123756 tacttcctccggtccttattataagaaaaaattgactttt-aggtttataaaataattaatatatcttattgtaaatatagactagatacattacttata 16123854  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccg 145  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  16123855 caatgaaccaaaaaagttaattgttttttataataaggaccg 16123896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 48643741 - 48643603
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    ||||||||| |||||| |||||| ||||||| ||||| |||||||||||||||||  || || |||||||||| |||||| |||||||| || |||| ||    
T  48643741 tccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttacacgattaacctaa 48643642  T
Q  116 aaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  48643641 aaagtcaattgtttcttataataaggaccggagatagta 48643603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 19227458 - 19227326
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| ||| || || || |||||||||| |||||||| ||||    
T  19227458 atactccctccggtccttattataagaaacaattgatttttttggttcatagaataattaatttatcttgttataaatatagactagatacatcatttac 19227359  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttata 135  Q
    | ||| |||  |||||||||| |||||||||||    
T  19227358 ataataaacttaaaaagtcaaatgtttcttata 19227326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 24489461 - 24489322
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| ||||||||||||||||||||| ||| ||||||||| |  ||||||||||||||||||||| |||| ||| ||||| |||| ||||||||| ||||    
T  24489461 tactccctccgatccttattataagacaaagttgatttttaaa-ttcatagaataattaatgtatcttatagtaaatataaactagatacatcacctaca 24489363  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggacc 144  Q
     ||| ||| ||||||||||||| ||| ||||||||||||||    
T  24489362 aaataaactaaaaaagtcaattattttttataataaggacc 24489322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 50100346 - 50100206
Alignment:
Q  2 aatacttcctccgatccttattataagaaaa-aattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    |||||| |||||| |||||||||||| |||| |||| | || || | ||||||||| |||||| |||| ||||| || |||||||||| |||||||||||    
T  50100346 aatactccctccggtccttattataaaaaaataattaacttgtttgattcatagaaaaattaacgtatcttattataaatatagactagatacatcactt 50100247  T
Q  101 acacaatgaaccaaaaaagtcaattgtttcttataataagg 141  Q
    | ||||||||| |||||||||||||||||||||||||||||    
T  50100246 atacaatgaactaaaaaagtcaattgtttcttataataagg 50100206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 50660081 - 50659948
Alignment:
Q  10 ctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatga 109  Q
    ||||| |||||||||||||||||| |||| ||||||| || |||||||||||||||||| |||||||| |||           |||||||||||||||||    
T  50660081 ctccggtccttattataagaaaaagttgactttttagatttatagaataattaatgtatcttattgtagata-----------catcacttacacaatga 50659993  T
Q  110 accaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||||||| |||||||||||| |||||||||||| ||| |||||    
T  50659992 accaaaaaaatcaattgtttctaataataaggaccagagggagta 50659948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 44118333 - 44118188
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    |||||||||| | |||||||||||||||| |||||| ||||||| |||||   ||||||||||||| || || || |||||||||| |||||||| ||||    
T  44118333 atacttcctctggtccttattataagaaacaattgactttttagattcattatataattaatgtatattgttataaatatagactagatacatcatttac 44118234  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    |||||||| | |||||||||| | |||| ||||||||  |||||||    
T  44118233 acaatgaatctaaaaagtcaaatatttcctataataaaaaccggag 44118188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 36191483 - 36191616
Alignment:
Q  14 gatccttattataagaaaaaattgattttttaggttcatagaataat---taatgtattttattgtacatatagactaaatacatcacttacacaatgaa 110  Q
    |||||||||||||||||| |||||| ||||| |||||||||||||||   |||||||| || || || |||||||||| |||||||||||||| ||||||    
T  36191483 gatccttattataagaaacaattgacttttttggttcatagaataatgattaatgtatcttgttatatatatagactagatacatcacttacataatgaa 36191582  T
Q  111 ccaaaaaagtcaattgtttcttataataaggacc 144  Q
    || ||||  |||| |  |||||||||||||||||    
T  36191583 cctaaaagatcaaataattcttataataaggacc 36191616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 2544493 - 2544602
Alignment:
Q  40 tttttaggttcatagaataattaatgtattttattgtacat-atagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataata 138  Q
    ||||||||||||| |||||||| |||||| || || || || |||||| |||||||||||||| |||||||| | ||||||||||||||||||| |||||    
T  2544493 tttttaggttcattgaataattgatgtatcttgttataaattatagaccaaatacatcacttatacaatgaatctaaaaagtcaattgtttcttgtaata 2544592  T
Q  139 aggaccggag 148  Q
    ||||||||||    
T  2544593 aggaccggag 2544602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 19899626 - 19899756
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttat--tgtacatatagactaaatacatcacttacacaatgaaccaaaa 116  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||| | || || |  | || |||||||||| |||||||| |||||||||||||| | |    
T  19899626 ttattataagaaacaattga-tttttaggttcattgaataattaacgcatcttgttatatatatatagactagatacatcatttacacaatgaacctata 19899724  T
Q  117 aagtcaattgtttcttataataaggaccggag 148  Q
     |||||||||||| ||||||||||||||||||    
T  19899725 gagtcaattgttttttataataaggaccggag 19899756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 25313352 - 25313276
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||||||    
T  25313352 atatagactaaatacatcacttacacaatgaacctaaaaaatcaattattttttataataaggaccgaagagagtat 25313276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 46220372 - 46220456
Alignment:
Q  11 tccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacat 95  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| ||||| |||| ||||||    
T  46220372 tccggtccttattataagaaaaaattgattttttatattcatagaataattaatgtatcttattgtaaatatatactagatacat 46220456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 8769175 - 8769283
Alignment:
Q  46 ggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccg 145  Q
    |||||||||||| |||||||||| || || || ||||||| || ||||||||||||||||||||||  ||||||| || | |||||||||||||||||||    
T  8769175 ggttcatagaatgattaatgtatcttgttataaatatagattagatacatcacttacacaatgaacttaaaaagttaact-tttcttataataaggaccg 8769273  T
Q  146 gagagagtat 155  Q
    ||| ||||||    
T  8769274 gagggagtat 8769283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 48346599 - 48346448
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||||||||||||||||||||   || | ||||||| |||||  | |||||||||||| || || || |||||||||| ||||||||||||||    
T  48346599 tactccctccgatccttattataagaaactttttactttttagattcattaagtaattaatgtatcttgttataaatatagactagatacatcacttaca 48346500  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
     ||| |||  ||||||||||  |||| |||||||||| || |||| ||||||    
T  48346499 taataaacttaaaaagtcaaaagttttttataataagaacgggagggagtat 48346448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 8764273 - 8764381
Alignment:
Q  46 ggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccg 145  Q
    ||||||||||||||||||||||| || || || ||||||| || |||||||||||||||||| |||  ||||| |||| | |||||||||||||||| ||    
T  8764273 ggttcatagaataattaatgtatcttgttataaatatagattagatacatcacttacacaataaacttaaaaaatcaact-tttcttataataaggatcg 8764371  T
Q  146 gagagagtat 155  Q
    ||| ||||||    
T  8764372 gagggagtat 8764381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 45746479 - 45746593
Alignment:
Q  13 cgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaacc 112  Q
    ||||||||| ||||||||| |||||||||||||| || || ||||||||||| ||| |  || || |||||||||| || ||||||||||||| ||||      
T  45746479 cgatccttagtataagaaacaattgattttttagatttattgaataattaatatatctcgttataaatatagactagatccatcacttacacattgaata 45746578  T
Q  113 aaaaaagtcaattgt 127  Q
     ||||||||||||||    
T  45746579 taaaaagtcaattgt 45746593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 51517031 - 51517109
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtatca 157  Q
    |||||||| |||||||||| |||  |||||||||||||||||||| ||||||||||||  |||||||||| ||||||||    
T  51517031 atatagaccaaatacatcatttatgcaatgaaccaaaaaagtcaaatgtttcttataaataggaccggagggagtatca 51517109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 53703777 - 53703728
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  53703777 atgaaccaaaaaagtcaattgtttcttataataaggaccggagggagtat 53703728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 51723386 - 51723493
Alignment:
Q  13 cgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaacc 112  Q
    |||||||  |||||||||||| |||||||||||| ||||| || |||||||||||||| ||     |||||||||||||| |||| ||| |||||||| |    
T  51723386 cgatcctatttataagaaaaagttgattttttagattcattgagtaattaatgtatttgatatagaatatagactaaatatatcatttatacaatgaatc 51723485  T
Q  113 aaaaaagt 120  Q
    ||||||||    
T  51723486 aaaaaagt 51723493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 2544486 - 2544436
Alignment:
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  2544486 caatgaacctaaaaagtcaattgtttcttataataaggaccggagggagta 2544436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 19227409 - 19227458
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  19227409 atgaaccaaaaaaatcaattgtttcttataataaggaccggagggagtat 19227458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 31376276 - 31376325
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  31376276 atgaaccaaaaaagtcaattgtttcttgtaataaggaccggagggagtat 31376325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 39617012 - 39617061
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  39617012 atgaaccaaaaaagtcaattgtttcttgtaataaggaccggagggagtat 39617061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 42896279 - 42896140
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||| |||| | |||||| |||||| |||||| | |||||| |  |  |   ||||||| | |||||||| |||  ||||||||| ||    
T  42896279 tccttattataagaaacaattcactttttacgttcattgaataactgatgtatatggtccttattatagaccagatacatcagttattcaatgaacctaa 42896180  T
Q  116 aaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||| ||||| |||||||||||| |||||||| ||||||    
T  42896179 aaagtgaattgcttcttataataaagaccggagggagtat 42896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 44518044 - 44518167
Alignment:
Q  13 cgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaacc 112  Q
    |||||||  |||||||||||  |||| ||||||| ||||| || |||||||||||| || |   | |||||||| |||||||||| ||| |||||||| |    
T  44518044 cgatcctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctaaaatatagaccaaatacatcatttagacaatgaatc 44518143  T
Q  113 aaaaaagtcaattgtttcttataa 136  Q
    |||||||||||   ||||||||||    
T  44518144 aaaaaagtcaaagttttcttataa 44518167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 44664200 - 44664262
Alignment:
Q  23 tataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatataga 85  Q
    ||||| ||| |||||||||||||||||||| ||||||||||||||| ||||| || |||||||    
T  44664200 tataaaaaataattgattttttaggttcattgaataattaatgtatcttattataaatataga 44664262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 21662883 - 21663035
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacat-atagactaaatacatcactt 100  Q
    |||||| |||||| ||||  |||||||||||| |||| ||||||| ||||| || ||||||||||| ||  |  || || |||||| |||||||||| ||    
T  21662883 aatactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggta-tagattatagaccaaatacatcattt 21662981  T
Q  101 acacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |  ||||||| ||||||||| || ||||||||||||  | |||||||| |||||    
T  21662982 atgcaatgaatcaaaaaagttaaatgtttcttataaataagaccggagggagta 21663035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 154
Target Start/End: Complemental strand, 12065047 - 12064908
Alignment:
Q  15 atccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtaca-tatagactaaatacatcacttacacaatgaacca 113  Q
    |||||| ||||||||||||||||| ||||||  |||||  | |||||||| ||||| | | || | ||||||| |||||||||| | |  ||||||| ||    
T  12065047 atcctttttataagaaaaaattgactttttaaattcattaagtaattaatatattt-agtatagaatatagaccaaatacatcattaatgcaatgaatca 12064949  T
Q  114 aaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||||| || ||||||||||||  |||||||||| |||||    
T  12064948 aaaaagtaaaatgtttcttataagtaggaccggagggagta 12064908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 36191521 - 36191485
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataagga 142  Q
    |||||||||||||||||||||||||||||||||||||    
T  36191521 atgaaccaaaaaagtcaattgtttcttataataagga 36191485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 45113733 - 45113884
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaa-atacatcacttac 102  Q
    |||| |||| |||||||||||||||||| |||||||||||| ||||||| |  ||| | |||||| | | | || || || | ||| |||||| | |||     
T  45113733 tactccctctgatccttattataagaaacaattgatttttttggttcattgtgtaagtgatgtatct-agtctatatttacaataagatacattaattat 45113831  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
     | ||||||| |||||||||| | |||||||||||||||||||||| ||||||    
T  45113832 tctatgaacctaaaaagtcaactttttcttataataaggaccggagggagtat 45113884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 2544436 - 2544491
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataa 59  Q
    |||| |||||| |||||||||||||||| |||||| ||||||||||||| ||||||    
T  2544436 tactccctccggtccttattataagaaacaattgactttttaggttcattgaataa 2544491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 6061117 - 6061184
Alignment:
Q  40 tttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaat 107  Q
    ||||||| |||||||||||||||||| ||||  || || ||||| |||| ||||||||||||||||||    
T  6061117 tttttagattcatagaataattaatgcatttcgttataaatatatactagatacatcacttacacaat 6061184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 49885378 - 49885508
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||||| ||  ||||||||||||||| ||||||||| |||||  ||||||| |||||| | | | || | |||||| |||||||||| |||      
T  49885378 tactacctccgattctatttataagaaaaaattaattttttagattcattcaataattgatgtatct-agtctagaaatagaccaaatacatcaattatc 49885476  T
Q  104 caatgaaccaaaaaagtcaattgtttcttata 135  Q
    || | || ||||||||| ||||||||||||||    
T  49885477 cacttaatcaaaaaagtaaattgtttcttata 49885508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 53284467 - 53284420
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggtt 49  Q
    ||||||||||||| |||||||||||||||| |||||||||||| ||||    
T  53284467 aatacttcctccggtccttattataagaaacaattgatttttttggtt 53284420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 53442056 - 53441905
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  |||||||||||| |||| ||||||  ||||| |||||||||||||| ||  |     || || || |||||||||| |||      
T  53442056 tactccctccggtcctatttataagaaaaagttgactttttaaattcattgaataattaatgtacttggtatagaatgtataccaaatacatcatttatg 53441957  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||| || ||||||||||||  |||||||||| ||||||    
T  53441956 caatgaatcaaaaaagtaaaatgtttcttataaataggaccggagggagtat 53441905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 19649706 - 19649600
Alignment:
Q  26 aagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaatt 125  Q
    |||||| | |||||||||||| ||||| || ||||| |||||||   |   | ||||||||||||||||||| |||  ||||||| |||||||||||| |    
T  19649706 aagaaacatttgattttttagattcattgagtaattgatgtattcggtctaaaatatagactaaatacatcaattattcaatgaatcaaaaaagtcaaat 19649607  T
Q  126 gtttctt 132  Q
    |||||||    
T  19649606 gtttctt 19649600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 43448975 - 43449089
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||||||||||| ||||| || ||||| || ||| || |     ||||| || |||||||||| ||| |||||||||||||||| ||    
T  43448975 ttataagaaaaagttgattttttagattcattgagtaattgatatatcttgtctatgatataaaccaaatacatcatttatacaatgaaccaaaaaaatc 43449074  T
Q  122 aattgtttcttataa 136  Q
    || | ||||||||||    
T  43449075 aaatatttcttataa 43449089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 52864968 - 52865082
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||| ||||||| || | ||||||| ||||| || ||||| |||||| ||||   | |||||||||||||| |||| |||  ||||||| ||||||||||    
T  52864968 ttatgagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagactaaatatatcatttatgcaatgaatcaaaaaagtc 52865067  T
Q  122 aattgtttcttataa 136  Q
    |||| ||| ||||||    
T  52865068 aattattttttataa 52865082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 297
Target Start/End: Original strand, 8705946 - 8706044
Alignment:
Q  203 tctcatgctcattatatcttgttgttcatcctaccttaatctcaaccatttactaacctct----ctctcttctttattattattctttccttcatgta 297  Q
    ||||||||||||| | |  || ||| |||| |||||| |||||| |||||||||||| | |    ||||||||| ||||||||||||||||||||||||    
T  8705946 tctcatgctcattctcttatgatgtccatcataccttgatctcagccatttactaacttttttttctctcttctatattattattctttccttcatgta 8706044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 297
Target Start/End: Original strand, 9057833 - 9057931
Alignment:
Q  203 tctcatgctcattatatcttgttgttcatcctaccttaatctcaaccatttactaacctct----ctctcttctttattattattctttccttcatgta 297  Q
    ||||||||||||| | |  || ||| |||| |||||| |||||| |||||||||||| | |    ||||||||| ||||||||||||||||||||||||    
T  9057833 tctcatgctcattctcttatgatgtccatcataccttgatctcagccatttactaacttttttttctctcttctatattattattctttccttcatgta 9057931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 12747774 - 12747847
Alignment:
Q  82 tagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||| |||||||||| |||| | ||||| | ||||| |||||| ||||||||||  |||||||||||||||||    
T  12747774 tagaccaaatacatcaattactcgatgaatctaaaaaatcaattttttcttataaataggaccggagagagtat 12747847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12747849 - 12747780
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    |||||||  ||||| ||||  ||||||||||||||||||||||||| ||||| || ||||| ||||||||    
T  12747849 aaatactctctccggtcctatttataagaaaaaattgattttttagattcatcgagtaattgatgtattt 12747780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 21944336 - 21944295
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccgga 147  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  21944336 atgaacctaaaaagtcaattttttcttataataaggaccgga 21944295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 25313690 - 25313625
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtatt 69  Q
    ||||| |||||||| ||||||||||||| |||||| |||||| ||||||  || ||||||||||||    
T  25313690 tactttctccgatctttattataagaaacaattgactttttaagttcattaaacaattaatgtatt 25313625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 27161439 - 27161504
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtat 68  Q
    |||||||||||| || |||||||||  ||||| | |||||||||||||||||||||| | ||||||    
T  27161439 atacttcctccggtcattattataaacaaaaaattattttttaggttcatagaataaatgatgtat 27161504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 29398584 - 29398512
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacat 95  Q
    ||||||||||||||  ||||||||||||||| |||||  ||||||||||  || || |||||||||||||||||    
T  29398584 ttataagaaaaaatatattttttaggttcattgaatacataatgtatttggtt-tatatatagactaaatacat 29398512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 154
Target Start/End: Original strand, 48643609 - 48643753
Alignment:
Q  10 ctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttat-tgtacatatagactaaatacatcacttacacaatg 108  Q
    ||||| |||||||||||||||| |||||| |||||||||| || |  ||| |||||||| |  | | ||  |||| || |||||||| | |||  |||||    
T  48643609 ctccggtccttattataagaaacaattgactttttaggttaatcgtgtaagtaatgtatctagtctatatttata-acgaaatacattaattattcaatg 48643707  T
Q  109 aaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    || | ||||||||||||||||||| |||||||||| |||| |||||    
T  48643708 aatctaaaaagtcaattgtttcttgtaataaggactggagggagta 48643753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 50660047 - 50660088
Alignment:
Q  114 aaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||||| | |||||||||||||||||||||||||||||    
T  50660047 aaaaagtcaactttttcttataataaggaccggagagagtat 50660088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 155
Target Start/End: Original strand, 8266329 - 8266381
Alignment:
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||| |||||||||||| ||||||||||||  |||||||||| ||||||    
T  8266329 acaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtat 8266381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 27363274 - 27363170
Alignment:
Q  40 tttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataa 139  Q
    ||||||| |||||  | ||||||| |||| || || || ||||||| || |||||||||||||| | |||| | ||||| ||||  ||||||||||||||    
T  27363274 tttttagattcattaagtaattaacgtatcttgttataaatatagattagatacatcacttacatattgaatctaaaaaatcaaaagtttcttataataa 27363175  T
Q  140 ggacc 144  Q
    |||||    
T  27363174 ggacc 27363170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 4190621 - 4190672
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||||||||||||| ||  ||||||||||||||||| ||||||||| |||||    
T  4190621 aaatacttcctccggtcactattataagaaaaaattcattttttagtttcat 4190672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 13622561 - 13622494
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccgg 146  Q
    |||||||| ||||| |||| |||  |||||||| ||||||||||| ||||||||||||  ||||||||    
T  13622561 atatagaccaaatatatcatttatgcaatgaactaaaaaagtcaaatgtttcttataaataggaccgg 13622494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 155
Target Start/End: Original strand, 28406566 - 28406617
Alignment:
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||| ||||||||||||||||||| |||  |||||||||| ||||||    
T  28406566 caatgaacctaaaaagtcaattgtttcttgtaaataggaccggagggagtat 28406617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31376171 - 31376222
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    ||||||| |||||| |||||||||||||||| | |||| |||||||||||||    
T  31376171 aaatactccctccggtccttattataagaaacatttgactttttaggttcat 31376222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 44118283 - 44118322
Alignment:
Q  105 aatgaaccaaaaaagtcaattgtttcttataataaggacc 144  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  44118283 aatgaatctaaaaagtcaattgtttcttataataaggacc 44118322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 23223088 - 23222975
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||||||||||||| || ||||| || ||| | |||||| || |   | |||||||| |||||||||| ||| | ||| ||  |||||||||    
T  23223088 ttataagaaaaaattgattttt-agattcattgagtaactgatgtatcttgtctaaaatatagaccaaatacatcatttatataataaattaaaaaagtc 23222990  T
Q  122 aattgtttcttataa 136  Q
    || ||||||||||||    
T  23222989 aaatgtttcttataa 23222975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 42896227 - 42896281
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggacc 144  Q
    |||||||| |||  ||||||||  ||||||| |||||||||||||||||||||||    
T  42896227 atacatcagttattcaatgaacgtaaaaagtgaattgtttcttataataaggacc 42896281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 9197155 - 9197098
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    |||||||| |||||||||| |||  ||||||| |||||||||||| | ||||||||||    
T  9197155 atatagacaaaatacatcatttatgcaatgaatcaaaaaagtcaaatatttcttataa 9197098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 14197801 - 14197854
Alignment:
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtatca 157  Q
    ||||||| | |||||||||||||||||||| ||| ||||| |||| ||||||||    
T  14197801 caatgaatctaaaaagtcaattgtttcttaaaattaggactggagggagtatca 14197854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 148
Target Start/End: Complemental strand, 16123795 - 16123762
Alignment:
Q  115 aaaagtcaattgtttcttataataaggaccggag 148  Q
    ||||||||||| ||||||||||||||||||||||    
T  16123795 aaaagtcaattttttcttataataaggaccggag 16123762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 24597021 - 24596972
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtat 68  Q
    |||||||||||||||||| || ||||| |||||| |||||| ||||||||    
T  24597021 ttattataagaaaaaattcatattttaagttcattgaataaataatgtat 24596972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 25313641 - 25313690
Alignment:
Q  105 aatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||||  |||||||||||||||||||||||||| || |||||| ||||    
T  25313641 aatgaacttaaaaagtcaattgtttcttataataaagatcggagaaagta 25313690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 155
Target Start/End: Complemental strand, 27330113 - 27330036
Alignment:
Q  78 catatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||| || |||||| || | | | |||| ||||||||||  ||||||||||||||||| ||||| ||||||    
T  27330113 catatagactagattcatcacatatatactaaacctaaaaagtcaaaagtttcttataataaggatcggagggagtat 27330036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 136
Target Start/End: Original strand, 43343532 - 43343577
Alignment:
Q  91 tacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    ||||||| ||| |||||||| |||||||||||| ||||||||||||    
T  43343532 tacatcatttatacaatgaatcaaaaaagtcaaatgtttcttataa 43343577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 25313289 - 25313325
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcat 52  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  25313289 tccttattataaaaaataattgattttttaggttcat 25313325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 28406464 - 28406532
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    |||||| |||||| ||||  ||| |||||| |||||| ||||||| ||| | |||||||||||||||||    
T  28406464 aatactccctccggtcctatttacaagaaacaattgactttttagattcgttgaataattaatgtattt 28406532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 28406541 - 28406465
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||| |||||||| | |||  ||| ||| | ||||||||||||||||||| |||  |||||||||| ||||||    
T  28406541 atatagaccaaatacattaattattcaacgaatctaaaaagtcaattgtttcttgtaaataggaccggagggagtat 28406465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 28406617 - 28406553
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgta 67  Q
    ||||| |||||| ||||  ||| |||||| |||||| ||||||||||||| |||||||| |||||    
T  28406617 atactccctccggtcctatttacaagaaacaattgactttttaggttcattgaataatttatgta 28406553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 36985155 - 36985287
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  |||||||||||  || |||||| || || || | ||||||||||||| || ||    ||||||||||||||||| | |||      
T  36985155 tactccctccggtcctatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatg 36985254  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataa 136  Q
    ||||||| ||||||||||||   ||||||||||    
T  36985255 caatgaatcaaaaaagtcaaaaatttcttataa 36985287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 136
Target Start/End: Original strand, 37010594 - 37010726
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| |||||| ||||  |||||||||||  || |||||| || || || | ||||||||||||| || ||    ||||||||||||||||| | |||      
T  37010594 tactccctccggtcctatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatg 37010693  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataa 136  Q
    ||||||| ||||||||||||   ||||||||||    
T  37010694 caatgaatcaaaaaagtcaaaaatttcttataa 37010726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 6e-50; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 2 - 154
Target Start/End: Original strand, 30438740 - 30438892
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| ||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  30438740 aatactcccttcgatccttattataagaaaaagttgactttttagattcatagaataattaatgtattttattgtaaatatagactagatacatcactta 30438839  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
     ||||| |||||||||||| |||| |||||||||||||||| ||||| |||||    
T  30438840 tacaataaaccaaaaaagttaattatttcttataataaggatcggagggagta 30438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 28605721 - 28605568
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| | |||| ||||||||||||||||||  |||  |||||| ||||||||||||||||||||| |||||||| ||||||  |||||||||||||||    
T  28605721 aatactccatccggtccttattataagaaaaagctgaccttttagattcatagaataattaatgtatcttattgtaaatatagtttaaatacatcactta 28605622  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  28605621 cacaatgaaccaaaaaagttaattgtttcttataataaggaccagagggagtat 28605568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 12605754 - 12605608
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatg 108  Q
    |||||| || ||||||||||||||| ||||  |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||  ||||    
T  12605754 cctccggtctttattataagaaaaagttgacattttaggttcatggaataattaatgtatcttattgtaaatatagactaaatacatcacttacgtaatg 12605655  T
Q  109 aaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||  |||||| ||||||||||||||||||||||| ||||| ||||||    
T  12605654 aataaaaaaaatcaattgtttcttataataaggaacggagggagtat 12605608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 10 - 148
Target Start/End: Complemental strand, 12217635 - 12217495
Alignment:
Q  10 ctccgatccttattataagaaaaaa-ttgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatg 108  Q
    ||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||| |||||     
T  12217635 ctccggtccttattataagaaaaaaattgactttttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttatacaata 12217536  T
Q  109 aacc-aaaaaagtcaattgtttcttataataaggaccggag 148  Q
    |||| |||||| |||||||||| |||||||||||| |||||    
T  12217535 aaccaaaaaaaatcaattgttttttataataaggatcggag 12217495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 10145349 - 10145220
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaa 118  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||| |||||||||||| |  ||||| |||||||    
T  10145349 ttattataaaaaaaaattgactttttaggttcataaaataattaatgtatcttattgtaaatatagactagatacatcacttatatgatgaatcaaaaaa 10145250  T
Q  119 gtcaattgtttcttataataaggaccggag 148  Q
     |||||| |||||||||||||||| |||||    
T  10145249 atcaattatttcttataataaggatcggag 10145220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 8264986 - 8265115
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaa 118  Q
    ||||||||| ||| ||||||||||||  |||||||||||||||||||||| || || || |||||||||| ||||||||||||||||||||||  |||||    
T  8264986 ttattataaaaaacaattgatttttttagttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacacaatgaacttaaaaa 8265085  T
Q  119 gtcaattgtttcttataataaggaccggag 148  Q
     |||| | |||||||||||||||| |||||    
T  8265086 atcaactttttcttataataaggaacggag 8265115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 2913331 - 2913483
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| ||||||||||||| || | |||| ||||||| ||||| |||||||||||||   |  || || |||||||||| |||||| |||||     
T  2913331 atactccctccggtccttattataagcaacatttgactttttagattcattgaataattaatgttcgtcgttataaatatagactagatacattacttat 2913430  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  2913431 acaatgaacctaaaaagtcaattgttgcttataataaggaccggagggagtat 2913483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 9343134 - 9343262
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaa 118  Q
    ||||||||||||| |||||| ||||||| ||||||||||||||||||||| || || || |||||||||| |||||| | ||||||||| ||    ||||    
T  9343134 ttattataagaaataattgactttttagattcatagaataattaatgtatcttgttataaatatagactagatacattatttacacaataaatttgaaaa 9343233  T
Q  119 gtcaattgtttcttataataaggaccgga 147  Q
    |||||||||||| ||||||||||||||||    
T  9343234 gtcaattgtttcctataataaggaccgga 9343262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 359682 - 359569
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||| |||||| ||||||||||||  |||||| |||||||| |  || || ||||||| || ||||||||||||||||||||||  ||    
T  359682 tccttattataagaaacaattgactttttaggttcaatgaataactaatgtatctcgttataaatatagattagatacatcacttacacaatgaacataa 359583  T
Q  116 aaagtcaattgttt 129  Q
    ||| ||||||||||    
T  359582 aaaatcaattgttt 359569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 155
Target Start/End: Original strand, 12240111 - 12240250
Alignment:
Q  14 gatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaacca 113  Q
    |||||||||||||| ||| ||||||||||||||||| || ||||||||||   || | ||| || ||||| | || |||||||| ||||||||||||||     
T  12240111 gatccttattataaaaaataattgattttttaggttaattgaataattaa--catctcattataaatataaattagatacatcatttacacaatgaacct 12240208  T
Q  114 aaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||| |||||| |||||| |||||||||   ||||||||||    
T  12240209 aaaaaatcaattatttcttgtaataaggatttgagagagtat 12240250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 23916163 - 23916276
Alignment:
Q  41 ttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataag 140  Q
    ||||| ||||||  |||| ||||||||| |  || || ||||||| || ||| ||||| ||||||||||| | |||||||||||||||||||||||||||    
T  23916163 ttttacgttcattaaatatttaatgtatctcgttataaatatagattagatatatcacatacacaatgaatctaaaaagtcaattgtttcttataataag 23916262  T
Q  141 gaccggagagagta 154  Q
    |||||||| |||||    
T  23916263 gaccggagggagta 23916276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 3847546 - 3847456
Alignment:
Q  15 atccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacaca 105  Q
    |||||| ||||||||||||| ||| |||||||||||||| |||||||||| ||||||||| || |||||||||| || ||| |||| ||||    
T  3847546 atccttgttataagaaaaaagtgactttttaggttcatataataattaatatattttattataaatatagactagatgcattacttgcaca 3847456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 29284635 - 29284529
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    ||||||| |||||||| |||| | | ||||| ||||| |||||||||||| || |  || || |||||||||| |||||||||||||| |||||||| ||    
T  29284635 tccttataataagaaacaattaactgtttagtttcattgaataattaatgcatctcgttataaatatagactagatacatcacttacataatgaacctaa 29284536  T
Q  116 aaagtca 122  Q
    |||||||    
T  29284535 aaagtca 29284529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 17598110 - 17598173
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgta 67  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||  || |||||||||||||||||    
T  17598110 tacttcctccggtccttcttataagaaaaaattgactttttaaatttatagaataattaatgta 17598173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 3064900 - 3065034
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||||||   ||||||| ||||| | ||||||||||||| || |   | |||||||| ||||||| || |||  ||||||| |||||||||     
T  3064900 ttataagaaaaaattatctttttagattcattgtataattaatgtatcttgtataaaatatagaccaaatacaccatttatgcaatgaatcaaaaaagta 3064999  T
Q  122 aattgtttcttataataaggaccggagagagtatc 156  Q
    || | ||||||||||  |||||||||| |||||||    
T  3065000 aaatatttcttataaataggaccggagggagtatc 3065034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 17265852 - 17265738
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||||||||||  ||||| || ||||| |||||| || |     ||||||||||||||| ||| |||  ||||||| ||||||||||    
T  17265852 ttataagaaaaatttgattttttaaattcatcgagtaattgatgtatcttgtctagaatatagactaaatacgtcatttatgcaatgaatcaaaaaagtc 17265753  T
Q  122 aattgtttcttataa 136  Q
    || ||||||||||||    
T  17265752 aaatgtttcttataa 17265738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 154
Target Start/End: Complemental strand, 33120051 - 33119903
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    ||||||||||| | ||  |||||||||||  |||| ||||||| ||||| |||||||  |||||| || |   | |||||||| ||||||| || ||| |    
T  33120051 tacttcctccggttctatttataagaaaattttgactttttagattcattgaataatcgatgtatcttgtc--aaatatagaccaaatacaacatttata 33119954  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    ||||||| |||| ||||||| ||||||||||||  ||||||| || |||||    
T  33119953 caatgaatcaaagaagtcaaatgtttcttataaataggaccgaagggagta 33119903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 2913484 - 2913418
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtat 68  Q
    |||||| |||||| ||||||||||||| || |||||| ||||||||||||| | |||| ||||||||    
T  2913484 aatactccctccggtccttattataagcaacaattgactttttaggttcattgtataagtaatgtat 2913418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 30627840 - 30627954
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||| |||||||||||  || || || ||||| |||||| || |   | |||||||| |||||||||| |||  ||||||| || |||||||    
T  30627840 ttataagaaaaatttgattttttatatttattgagtaattgatgtatcttgtctaaaatatagaccaaatacatcatttatgcaatgaatcagaaaagtc 30627939  T
Q  122 aattgtttcttataa 136  Q
    || ||||||||||||    
T  30627940 aaatgtttcttataa 30627954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 17599513 - 17599605
Alignment:
Q  65 gtattttattgtacatatagactaaatacatcacttaca--caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||| |||||||| |||||||||| |||||  ||||| |  ||||||| |||||||||||||| ||| || |||||||||||| || ||||||    
T  17599513 gtatcttattgtaaatatagactagatacacaacttatatacaatgaatcaaaaaagtcaattatttattgtaataaggaccgaagggagtat 17599605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 359647 - 359683
Alignment:
Q  107 tgaaccaaaaaagtcaattgtttcttataataaggac 143  Q
    |||||| ||||||||||||||||||||||||||||||    
T  359647 tgaacctaaaaagtcaattgtttcttataataaggac 359683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 8265117 - 8265073
Alignment:
Q  8 tcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||    
T  8265117 tcctccgttccttattataagaaaaagttgattttttaagttcat 8265073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 12217489 - 12217529
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgatttttt 44  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  12217489 tacttcctccgatccttattataaaaaacaattgatttttt 12217529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 12450394 - 12450482
Alignment:
Q  48 ttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    ||||| |||||||| |||||||||||   | ||||||| ||||||||||| |||  |||||||  ||||||||||| | ||||||||||    
T  12450394 ttcattgaataattgatgtattttatctaaaatatagattaaatacatcatttatgcaatgaattaaaaaagtcaaatatttcttataa 12450482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 26484397 - 26484290
Alignment:
Q  40 tttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataa 139  Q
    ||||||| || || |||||||||||| || || || || |||||||||| |||||||| ||||||||  ||   |||||||| |||||||||||||||||    
T  26484397 tttttagatttatggaataattaatgcatcttgttataaatatagactacatacatcatttacacaacaaatataaaaagtc-attgtttcttataataa 26484299  T
Q  140 ggaccggag 148  Q
     | ||||||    
T  26484298 cggccggag 26484290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 2913382 - 2913331
Alignment:
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| | |||||||||| |||| ||||||||||||||||||| ||||||    
T  2913382 caatgaatctaaaaagtcaaatgttgcttataataaggaccggagggagtat 2913331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 10145219 - 10145254
Alignment:
Q  9 cctccgatccttattataagaaaaaattgatttttt 44  Q
    ||||||||||||||||||||||| ||||||||||||    
T  10145219 cctccgatccttattataagaaataattgatttttt 10145254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 12605607 - 12605649
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgatttttt 44  Q
    |||||| |||||| |||||||||||||||| ||||||||||||    
T  12605607 aatactccctccgttccttattataagaaacaattgatttttt 12605649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 24986007 - 24986069
Alignment:
Q  80 tatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataagga 142  Q
    ||||||| | |||||||| |||  ||||||||| ||||||| |||||| ||||||||||||||    
T  24986007 tatagaccatatacatcaattatccaatgaacctaaaaagtgaattgtctcttataataagga 24986069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 33128853 - 33128963
Alignment:
Q  33 aattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttctt 132  Q
    |||| ||||||||| |||||  |||||||||||||| | ||| || | ||| |||| |||||| | ||| | |||||||  |||||||||||| ||| ||    
T  33128853 aattaattttttagattcatttaataattaatgtatctcattataaagataaactatatacataatttataaaatgaacttaaaaagtcaattatttttt 33128952  T
Q  133 ataataaggac 143  Q
    || ||||||||    
T  33128953 atgataaggac 33128963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 12240238 - 12240201
Alignment:
Q  15 atccttattataagaaaaaattgattttttaggttcat 52  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  12240238 atccttattacaagaaataattgattttttaggttcat 12240201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 28630827 - 28630884
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    |||||||| |||||||| | |||  ||||||| | |||||||||||||||||||||||    
T  28630827 atatagaccaaatacataatttatgcaatgaatctaaaaagtcaattgtttcttataa 28630884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 30895258 - 30895315
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    |||||||| ||||| |||| |||  ||||||| |||||||||||| ||||||||||||    
T  30895258 atatagaccaaatatatcatttatgcaatgaatcaaaaaagtcaaatgtttcttataa 30895315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 33127915 - 33127842
Alignment:
Q  24 ataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatca 97  Q
    |||||||| |||||| ||||||| || || ||||||||||||||| || ||  | |||||||||| ||||||||    
T  33127915 ataagaaacaattgactttttagatttattgaataattaatgtatcttgttacaaatatagactagatacatca 33127842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 23916276 - 23916228
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||| |||||| |||||||||||||||| |||||| ||||||| |||||    
T  23916276 tactccctccggtccttattataagaaacaattgactttttagattcat 23916228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 52279383 - 52279232
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    |||| ||||||||||||||||||||||||| |||| ||||||| |||||| |||||||||| ||| |||||||| |||||||||  ||||||||||||||    
T  52279383 tactccctccgatccttattataagaaaaagttgactttttagattcatataataattaatatatcttattgtaaatatagacttgatacatcacttaca 52279284  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||||||| ||||||| |||| |||||||||||| ||| ||||||    
T  52279283 caatgaaccaaaaaaatcaattgcttctaataataaggaccagagggagtat 52279232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 27687981 - 27687839
Alignment:
Q  13 cgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaacc 112  Q
    |||||||| ||||||||||||||| | |||||| ||| |||||||||||||||||| |||||||| |||||||||| |||||||||||||| |||||||     
T  27687981 cgatccttgttataagaaaaaattaactttttaagtttatagaataattaatgtatcttattgtaaatatagactagatacatcacttacataatgaact 27687882  T
Q  113 aaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||| |||||| |||||||||||||| ||||||| ||||||    
T  27687881 aaaaaattcaattatttcttataataagaaccggagggagtat 27687839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 45977228 - 45977099
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaa 118  Q
    ||||||||||||||| |||| |||||| ||| |||||||||||||||||| |||||||| |||||||||| ||||||||| || ||||| ||||||||||    
T  45977228 ttattataagaaaaagttgactttttacgtttatagaataattaatgtatcttattgtaaatatagactagatacatcacctatacaataaaccaaaaaa 45977129  T
Q  119 gtcaattgtttcttataataaggaccggag 148  Q
    || |||||||||||||||||||||||||||    
T  45977128 gttaattgtttcttataataaggaccggag 45977099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 51590428 - 51590580
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| |||||||||||| ||| |||||| ||||| ||||||||||||||||||||||| || || || |||||||||| |||||||||||||    
T  51590428 atactccctccggtccttattataaaaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttac 51590527  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||| | |||| ||||| | |||||||||||||||||||||| ||||||    
T  51590528 acaatgaatctaaaaggtcaactttttcttataataaggaccggagggagtat 51590580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 48565541 - 48565677
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaa 118  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| |||| || || || |||||||||||||||||||| ||||||||||||  |||||    
T  48565541 ttattataagaaataattgatttttttggttcatagaataattaaagtatcttgttataaatatagactaaatacatcacctacacaatgaacttaaaaa 48565640  T
Q  119 gtcaattgtttcttataataaggaccggagagagtat 155  Q
    || || | |||||||||||||||||||||| ||||||    
T  48565641 gttaactttttcttataataaggaccggagggagtat 48565677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 31050261 - 31050388
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    ||||||||||||||||   |||| ||||||| ||||| |  ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||    
T  31050261 tccttattataagaaacttttgactttttagattcattgtgtaattaatgtattttgttgtaaatatagactaaatacatcacttacacaataaacctaa 31050360  T
Q  116 aaagtcaattgtttcttataataaggac 143  Q
    ||||||||||||||||||||||||||||    
T  31050361 aaagtcaattgtttcttataataaggac 31050388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 29438168 - 29438269
Alignment:
Q  35 ttgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttat 134  Q
    |||| ||||||||||||||||||||||||||||| |||||| | |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  29438168 ttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttacacaatgaactaaaaaagtcaattgtttcttat 29438267  T
Q  135 aa 136  Q
    ||    
T  29438268 aa 29438269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 155
Target Start/End: Complemental strand, 13320437 - 13320301
Alignment:
Q  19 ttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaa 118  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||||||  ||||||||||| ||||||||| ||| ||||||    
T  13320437 ttattataagaaaaagttgactttttagattcatagaataattaatatatcttattgtaaatatagtttaaatacatcatttacacaataaacaaaaaaa 13320338  T
Q  119 gtcaattgtttcttataataaggaccggagagagtat 155  Q
     | ||||||||||||||||||| ||||||| ||||||    
T  13320337 attaattgtttcttataataagaaccggagggagtat 13320301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 148
Target Start/End: Original strand, 15699461 - 15699607
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| ||||||||||||||||   |||||||||||| ||||| || |||||||||||| || ||||| |||||||||| ||||||||||||    
T  15699461 aatactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcactta 15699560  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
     ||||| |||| ||||| ||||||||||| |||||||||||| ||||    
T  15699561 tacaataaacctaaaaattcaattgtttcatataataaggacgggag 15699607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 19998407 - 19998553
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    ||||||| |||||| ||||||||||||||||   |||| ||||||  ||||| || |||||||| ||| || ||||| |||||||||| |||||||||||    
T  19998407 aaatactccctccggtccttattataagaaacttttgactttttatattcattgagtaattaatatatcttgttgtaaatatagactagatacatcactt 19998506  T
Q  101 acacaatgaaccaaaaaagtcaattgtttcttataataaggaccgga 147  Q
    |||||||||| | ||||| ||||||||||||||||||||||||||||    
T  19998507 acacaatgaatctaaaaattcaattgtttcttataataaggaccgga 19998553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 9 - 155
Target Start/End: Original strand, 13321718 - 13321864
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatg 108  Q
    |||||||||||||||| |||||| |||| | ||||| |||| ||| |||||||||||||| || || || |||||||||| |||||||||||||| ||||    
T  13321718 cctccgatccttattacaagaaacaattaacttttttggtttataaaataattaatgtatcttgttataaatatagactagatacatcacttacataatg 13321817  T
Q  109 aaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    || | ||||| |||| |||||||||||||||||||| ||| ||||||    
T  13321818 aatctaaaaaatcaaatgtttcttataataaggaccagagggagtat 13321864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 13770746 - 13770859
Alignment:
Q  42 tttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataagg 141  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||| ||  |||||||| || ||||||||||||||||     
T  13770746 tttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacacaataaattaaaaaagtaaactgtttcttataataaga 13770845  T
Q  142 accggagagagtat 155  Q
    ||||||| ||||||    
T  13770846 accggagggagtat 13770859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 44224283 - 44224411
Alignment:
Q  18 cttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaa 117  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||||| |||||||| |||||| ||| |||||||||||  |||||||||||||||    
T  44224283 cttattataa-aaaaaattgactttttagattcatagaataattaatgtatcttattgtaaatatagtctagatacatcacttgtacaatgaaccaaaaa 44224381  T
Q  118 agtcaattgtttcttataataaggaccgga 147  Q
    | | |||| ||| ||||||||||| |||||    
T  44224382 aattaattattttttataataagggccgga 44224411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 34175004 - 34174883
Alignment:
Q  35 ttgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttat 134  Q
    |||||||||||  ||||  || |||||||||||| || ||| | ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34175004 ttgattttttaaattcaatgagtaattaatgtatcttgttgcaaatataaactaaatacatcacttacacaatgaacctaaaaagtcaattgtttcttat 34174905  T
Q  135 aataaggaccggagagagtatc 156  Q
    |||||||| ||||  |||||||    
T  34174904 aataaggatcggatggagtatc 34174883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 22182909 - 22182764
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatg 108  Q
    |||||| ||||||||||||| || |||||| |||||| |||||| | |||||||||| || |  || || |||| | ||| ||||||||||||||||||     
T  22182909 cctccggtccttattataagcaacaattgactttttaagttcattggataattaatgcatctcgttataaatatgggctagatacatcacttacacaata 22182810  T
Q  109 aaccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    || | ||||||||||||||| ||||||||||||||||||| |||||    
T  22182809 aatctaaaaagtcaattgttacttataataaggaccggagggagta 22182764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 18038699 - 18038838
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||| | |||| ||||||||||||| |  ||| | |||||| |  || || || |||| || |||||||||||| |||||||| | ||    
T  18038699 tccttattataagaaatatttgactttttaggttcattgcttaagtgatgtatctcgttataaatgtagattagatacatcacttaaacaatgaatctaa 18038798  T
Q  116 aaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||| ||||| |||||||||||||||||| ||||||    
T  18038799 aaagtcaaatgttttttataataaggaccggagggagtat 18038838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 20486668 - 20486794
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    ||||||||||||||||  |||| |||||||| ||||| | |||||||| |||  || ||||| |||||| ||| ||| |||||| ||||||| |||| ||    
T  20486668 tccttattataagaaattattgtttttttagattcattgtataattaacgtaacttcttgtaaatataggctagatatatcactaacacaataaacctaa 20486767  T
Q  116 aaagtcaattgtttcttataataagga 142  Q
    |||||||||| ||| ||||||||||||    
T  20486768 aaagtcaattattttttataataagga 20486794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 44939216 - 44939071
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||||||| ||||| |  |||||||| |||||||||||||||| ||||| || ||||| |||||| | ||     |||||||| |||||||||| |||     
T  44939216 atacttccttcgatcatatttataagagaaaattgattttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcatttat 44939117  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    ||||||||  ||||||||||| ||||||||||||  ||||||||||    
T  44939116 acaatgaataaaaaaagtcaaatgtttcttataaataggaccggag 44939071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 29064301 - 29064145
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattga-ttttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactt 100  Q
    |||||||||||| ||||||||||| ||||| |||| | ||||||   || ||| |||||||||| |||||||||||| ||||||| ||||||||||| ||    
T  29064301 aatacttcctccaatccttattattagaaacaattaacttttttttatttataaaataattaatatattttattgtaaatatagattaaatacatcattt 29064202  T
Q  101 acacaatgaaccaaaaaagtcaattgtttctta---taataaggaccggagagagtat 155  Q
    | |||||||| | ||||| | |||| |||||||   |||||||||| |||| ||||||    
T  29064201 atacaatgaatctaaaaaat-aattttttcttatagtaataaggacgggagggagtat 29064145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 32837657 - 32837719
Alignment:
Q  26 aagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagacta 88  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  32837657 aagaaaaagttgactttttaggttcatagaataattaatgtattttattgttaatatagacta 32837719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 148
Target Start/End: Complemental strand, 52030963 - 52030873
Alignment:
Q  58 aattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    ||||||||||| ||||| || ||||| | || ||||||||||||||| ||||| | ||||| |||||| ||||||||||||||||||||||    
T  52030963 aattaatgtatcttattataaatataaattagatacatcacttacacgatgaaactaaaaaatcaattttttcttataataaggaccggag 52030873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 25238723 - 25238648
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtac 78  Q
    ||||| |||||  |||||||||||| ||| |||||| ||||||||||||||||||||||||||||| || ||||||    
T  25238723 atactccctcctgtccttattataaaaaacaattgactttttaggttcatagaataattaatgtatcttgttgtac 25238648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 26760324 - 26760190
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| ||||  ||||||||||||||||||||||||  ||||| || | ||||||||| ||  |     |||||||| |||||||||| |||    
T  26760324 aatactccctccggtcctatttataagaaaaaattgattttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcattta 26760225  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
      ||||||| |||||||||||| ||||||||||||    
T  26760224 ttcaatgaatcaaaaaagtcaaatgtttcttataa 26760190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 155
Target Start/End: Original strand, 26924210 - 26924363
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| ||||  |||||||||||| |||| ||||||  ||||| || | ||||||||| ||  |     |||||||| |||||||||| |||    
T  26924210 aatactccctccggtcctatttataagaaaaagttgactttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcattta 26924309  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
      ||||||| |||||||||||| ||||||||||||  |||||||||| ||||||    
T  26924310 ttcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggagggagtat 26924363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 37178984 - 37179053
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    ||||||||||||||||||| ||| ||||| || |||||||||||| ||||||||||||| ||| ||||||    
T  37178984 atatagactaaatacatcatttatacaataaatcaaaaaagtcaaatgtttcttataattagggccggag 37179053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 51590477 - 51590428
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  51590477 atgaaccaaaaaagtcaattgttttttataataaggaccggagggagtat 51590428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 38040425 - 38040274
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttaca 103  Q
    ||||||||||| ||||  |||||||||||| |||| ||||||| ||||| || ||||| |||||| || |     |||||||  ||||| |||| |||      
T  38040425 tacttcctccggtcctatttataagaaaaatttgactttttagattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatg 38040326  T
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| |||||||||||| ||||||||||||  ||||||| || ||||||    
T  38040325 caatgaatcaaaaaagtcaaatgtttcttataaataggaccgaagggagtat 38040274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 43851103 - 43850954
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgatttttta--ggttcatagaataattaatgtattttattgtacatatagactaaatacatcac 98  Q
    ||||||| |||| ||||||||||||||||||   || | ||||||  | |||||  |||||||||| ||| || || || ||||| | || |||||||||    
T  43851103 aaatactccctctgatccttattataagaaactttttactttttatagattcattaaataattaatatatcttgttataaatatatattagatacatcac 43851004  T
Q  99 ttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
    ||||| ||| || | ||||||||||  |||||||||||||| ||||||||    
T  43851003 ttacataataaatctaaaaagtcaaaagtttcttataataaagaccggag 43850954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 34332494 - 34332607
Alignment:
Q  23 tataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtca 122  Q
    ||||||||||  |||| ||||||| ||||| || ||||| ||||||||| |     |||||||| |||||||||| |||  ||||||| |||||||||||    
T  34332494 tataagaaaactttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatccaatgaatcaaaaaagtca 34332593  T
Q  123 attgtttcttataa 136  Q
    | ||||||||||||    
T  34332594 aatgtttcttataa 34332607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 34146935 - 34146887
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||||    
T  34146935 ttataagaaaaaattgatttttttgattcattgaataattaatgtattt 34146887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 519975 - 519832
Alignment:
Q  11 tccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaa 110  Q
    |||||||||  |||||||||||  || | ||||||| ||||| || ||||| |||||| ||||     |||||||  |||||||||| ||| ||||| ||    
T  519975 tccgatcctatttataagaaaattttaactttttagattcattgagtaattgatgtatcttatctagaatatagatcaaatacatcatttatacaataaa 519876  T
Q  111 ccaaaaaagtcaattgtttcttataataaggaccggagagagta 154  Q
     |||||||||||| ||||| ||||||  |||||||||| |||||    
T  519875 tcaaaaaagtcaaatgtttattataaataggaccggagggagta 519832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 31050387 - 31050249
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatataga-ctaaatacatcacttacacaatgaaccaa 114  Q
    |||||||||||||||| |||||| |||||||||| || |  ||| | |||||||| | | || || || | | |||||||| | |||||||||||| | |    
T  31050387 tccttattataagaaacaattgactttttaggtttattgtgtaagtgatgtattt-agtctatatttacaacaaaatacattaattacacaatgaatcta 31050289  T
Q  115 aaaagtcaattgtttcttataataaggaccggagagagta 154  Q
    |||||||||  ||||||||||||||||||| ||| |||||    
T  31050288 aaaagtcaaaagtttcttataataaggaccagagggagta 31050249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 52030872 - 52030915
Alignment:
Q  9 cctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  52030872 cctccggtccttattataagaaaaaattgattttttagtttcat 52030915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 640539 - 640652
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    ||||||||||||||||| ||||||| ||||| || ||||| |||||| ||||   | ||||||||||||||||| | ||| ||||||||  |||||| |     
T  640539 ttataagaaaaaattgactttttagattcat-gagtaattgatgtatcttatctaaaatatagactaaatacataatttatacaatgaatgaaaaaaatt 640637  T
Q  122 aattgtttcttataa 136  Q
    || |||||| |||||    
T  640638 aaatgtttcatataa 640652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 5966949 - 5967015
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccg 145  Q
    ||||||| || |||||||| ||||||||| |||| ||||| | | ||||||||||||||||||||||    
T  5966949 atatagattagatacatcaattacacaataaacctaaaaaataatttgtttcttataataaggaccg 5967015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 18038751 - 18038698
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggac 143  Q
    ||||||||||||  ||||||||| |||||||||| | |||||||||||||||||    
T  18038751 atacatcacttaagcaatgaacctaaaaagtcaaatatttcttataataaggac 18038698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 22182864 - 22182913
Alignment:
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagt 153  Q
    ||||||||  ||||||||||||||| ||||||||||||||||||| ||||    
T  22182864 caatgaacttaaaaagtcaattgttgcttataataaggaccggagggagt 22182913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 25238674 - 25238723
Alignment:
Q  106 atgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| |||||||||||||||| ||||||||||||| |||| ||||||    
T  25238674 atgaacctaaaaagtcaattgttttttataataaggacaggagggagtat 25238723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 26070841 - 26070974
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||  ||| |||| ||||||| ||||| || ||||| |||||| ||||     |||||||| |||||||| | |||  ||||||| |||||||||     
T  26070841 ttataagtgaaatttgactttttagattcattgagtaattgatgtatcttatctagaatatagaccaaatacattatttatgcaatgaatcaaaaaagta 26070940  T
Q  122 aattgtttcttataataaggaccggagagagtat 155  Q
    || ||||||||||||  | |||||||||||||||    
T  26070941 aaatgtttcttataaataagaccggagagagtat 26070974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 34174892 - 34174933
Alignment:
Q  11 tccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  34174892 tccgatccttattataagaaacaattgactttttaggttcat 34174933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 50155450 - 50155381
Alignment:
Q  1 aaatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    |||||||||||||| ||||  |||||||||||| |||| ||||||| ||||| || ||||| ||||||||    
T  50155450 aaatacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaattgatgtattt 50155381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 29256747 - 29256685
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgt 66  Q
    ||||||||||| ||||  |||||||||||| |||| ||||||| ||||| || ||||||||||    
T  29256747 tacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgt 29256685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 12175564 - 12175507
Alignment:
Q  40 tttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatca 97  Q
    ||||||||||||| ||| ||||||||||| || || || |||||||||| ||||||||    
T  12175564 tttttaggttcattgaacaattaatgtatcttgttataaatatagactagatacatca 12175507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 15699527 - 15699462
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||| | |||| ||||||| | ||||| ||||  ||||||||||||||||||||||| ||||||    
T  15699527 atacattaattactcaatgaatctaaaaaatcaaaagtttcttataataaggaccggagggagtat 15699462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 19998450 - 19998409
Alignment:
Q  114 aaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||||||  ||||||||||||||||||||||| ||||||    
T  19998450 aaaaagtcaaaagtttcttataataaggaccggagggagtat 19998409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 19998561 - 19998512
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    ||||||| |||| |||||||||||||||| |||||| ||||||| |||||    
T  19998561 atacttcatccggtccttattataagaaacaattgaatttttagattcat 19998512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 28359053 - 28359005
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattt 70  Q
    ||||||||||||| ||| ||||||  ||||| |||||||||||||||||    
T  28359053 ttataagaaaaaaatgaatttttaaattcattgaataattaatgtattt 28359005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 47084675 - 47084643
Alignment:
Q  38 attttttaggttcatagaataattaatgtattt 70  Q
    |||||||||||||||||||||| ||||||||||    
T  47084675 attttttaggttcatagaataactaatgtattt 47084643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 91; Significance: 5e-44; HSPs: 2)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 25765 - 25619
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattga-ttttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||||||||||| ||||| || |||||||||| ||||||||||||    
T  25765 atacttcctccggtccttattataagaaaaagttgacttttttacgttcatagaataattaatgtatcttattataaatatagactagatacatcactta 25666  T
Q  102 cacaatgaaccaaaaaagtcaattgtttcttataataaggaccggag 148  Q
     | ||| |||||||||||| |||||||| ||||||||||||||||||    
T  25665 tataataaaccaaaaaagttaattgttttttataataaggaccggag 25619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 25723 - 25767
Alignment:
Q  113 aaaaaagtcaattgtttcttataataaggaccggagagagtatca 157  Q
    ||||||||||| | ||||||||||||||||||||||  |||||||    
T  25723 aaaaaagtcaactttttcttataataaggaccggaggaagtatca 25767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 87; Significance: 1e-41; HSPs: 3)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 26736 - 26582
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| ||||||||||||||||   |||||||||||| ||||| || |||||||||||| || ||||| |||||||||| |||||||||||||    
T  26736 atactccctccggtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttac 26637  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtatca 157  Q
    | |||||||| |||||||||||  |||||||||||||||||||||| ||||||||    
T  26636 ataatgaacctaaaaagtcaatcctttcttataataaggaccggagggagtatca 26582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 26671 - 26737
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtatc 156  Q
    |||||| | |||| ||||||| | ||||| ||||  ||||||||||||||||||||||| |||||||    
T  26671 atacattaattactcaatgaatctaaaaaatcaaaagtttcttataataaggaccggagggagtatc 26737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 26584 - 26633
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcat 52  Q
    ||||| |||||| ||||||||||||||||  ||||| |||||||||||||    
T  26584 atactccctccggtccttattataagaaaggattgactttttaggttcat 26633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 3 - 140
Target Start/End: Original strand, 3807 - 3944
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| |||||||||||||||| |||||| ||||| | ||||| ||||| |||||| || |  || || |||||||||| |||||||||||||    
T  3807 atactccctccggtccttattataagaaacaattgacttttttgattcattgaatacttaatgcatctcgttataaatatagactagatacatcacttac 3906  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataag 140  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3907 acaatgaacctaaaaagtcaattgtttcttataataag 3944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 3858 - 3807
Alignment:
Q  104 caatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  3858 caatgaatcaaaaaagtcaattgtttcttataataaggaccggagggagtat 3807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 74; Significance: 8e-34; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 40342 - 40189
Alignment:
Q  2 aatacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||| |||||| ||||||||||||||||   |||| ||||||| ||||| || |||||||| ||| || ||||| |||||||||| ||||||||||||    
T  40342 aatactccctccggtccttattataagaaacttttgactttttagattcattgagtaattaatatatcttgttgtaaatatagactagatacatcactta 40243  T
Q  102 cacaatgaaccaaaaaagtcaa-ttgtttcttataataaggaccggagagagta 154  Q
    ||||||||||| ||||| |||| || ||| ||||||||||||||||||||||||    
T  40242 cacaatgaacctaaaaaatcaattttttttttataataaggaccggagagagta 40189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 40285 - 40341
Alignment:
Q  99 ttacacaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||| ||||||| | ||||||||||  ||||||||||||||||||||||| ||||||    
T  40285 ttactcaatgaatctaaaaagtcaaaagtttcttataataaggaccggagggagtat 40341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 1663 - 1616
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtatt 69  Q
    ||||||||||||||| ||||||||| ||||| |||||||| |||||||    
T  1663 ttataagaaaaaattaattttttagattcattgaataattgatgtatt 1616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 3377 - 3251
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||| |||| | |||||| ||| || ||||||| |||||||||   | || |||||||||| ||||||||||||||||||||||  ||    
T  3377 tccttattataagaaacaattaactttttaagttaattgaataatcaatgtatttcgatataaatatagactagatacatcacttacacaatgaacataa 3278  T
Q  116 aaagtcaattgtttcttataataagga 142  Q
    |||||||||||||||||||||||||||    
T  3277 aaagtcaattgtttcttataataagga 3251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 3349 - 3381
Alignment:
Q  114 aaaaagtcaattgtttcttataataaggaccgg 146  Q
    ||||||| |||||||||||||||||||||||||    
T  3349 aaaaagttaattgtttcttataataaggaccgg 3381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 112973 - 112821
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttac 102  Q
    ||||| |||||| ||||||  |||||||| |||||| ||||||| || || ||||||||||||||| || || || ||||||| || |||||||| ||      
T  112973 atactccctccggtccttaacataagaaacaattgactttttagatttattgaataattaatgtatcttgttataaatatagattagatacatcatttgt 112874  T
Q  103 acaatgaaccaaaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||||| |||| |||||||||||||||||||||||||| ||| ||||||    
T  112873 acaatgaacctaaaacgtcaattgtttcttataataaggacccgagggagtat 112821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 112932 - 112973
Alignment:
Q  114 aaaaagtcaattgtttcttataataaggaccggagagagtat 155  Q
    |||||||||||||||||||||  |||||||||||| ||||||    
T  112932 aaaaagtcaattgtttcttatgttaaggaccggagggagtat 112973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 12757 - 12888
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    |||||||||||||||| | |||| ||||||||||||| |  ||| | |||||| |  || || || ||||||| |||||||||||| | |||||||| ||    
T  12757 tccttattataagaaatatttgactttttaggttcattgtttaagtgatgtatctcgttataaatgtagactagatacatcacttaaataatgaacctaa 12856  T
Q  116 aaagtcaattgtttcttataataaggaccgga 147  Q
    |||||||| |||||||||||||||||||||||    
T  12857 aaagtcaaatgtttcttataataaggaccgga 12888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 12809 - 12755
Alignment:
Q  90 atacatcacttacacaatgaaccaaaaaagtcaattgtttcttataataaggacc 144  Q
    |||||||||||| |||||||||| |||||||||| | ||||||||||||||||||    
T  12809 atacatcacttaaacaatgaacctaaaaagtcaaatatttcttataataaggacc 12755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 15 - 143
Target Start/End: Original strand, 19307 - 19433
Alignment:
Q  15 atccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaat-gaacca 113  Q
    ||||||||||||||||||| |||| ||||||| |||||||   ||||||| ||| |||||||| ||||||||||  ||||||||||||| |||  |||||    
T  19307 atccttattataagaaaaagttgactttttagattcatag---aattaatatatcttattgtaaatatagactacttacatcacttacaaaataaaacca 19403  T
Q  114 aaaaagtcaattgtttcttataataaggac 143  Q
    |||||||||||||||| | ||||| |||||    
T  19404 aaaaagtcaattgtttataataatcaggac 19433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 12224 - 12350
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    ||||||||||||||||  |||| |||||||| || || | |||||||| |||| || ||||| |||||| ||| |||||||||| ||||||| |||| ||    
T  12224 tccttattataagaaattattgtttttttagatttattgtataattaacgtatcttcttgtaaatataggctagatacatcactaacacaataaacctaa 12323  T
Q  116 aaagtcaattgtttcttataataagga 142  Q
    |||||||||| ||| ||||||||||||    
T  12324 aaagtcaattattttttataataagga 12350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 7657 - 7783
Alignment:
Q  16 tccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaa 115  Q
    ||||||||||||||||  |||| |||||||| ||||| | |||||||| |||  || ||||| |||||| ||| ||| |||||| ||||||| |||| ||    
T  7657 tccttattataagaaattattgtttttttagattcattgtataattaacgtaacttcttgtaaatataggctagatatatcactaacacaataaacctaa 7756  T
Q  116 aaagtcaattgtttcttataataagga 142  Q
    |||||||||| ||| ||||||||||||    
T  7757 aaagtcaattattttttataataagga 7783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 5554 - 5438
Alignment:
Q  13 cgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaacc 112  Q
    |||| |||||||||||||| |||||| ||||||| ||||| |||||||||||||||  | |  || |||||||||  |||| ||||||||||||||||      
T  5554 cgatgcttattataagaaataattgactttttagattcattgaataattaatgtatactgtaataaatatagactcgatacttcacttacacaatgaatt 5455  T
Q  113 aaaaaagtcaattgttt 129  Q
     ||||||||||||||||    
T  5454 taaaaagtcaattgttt 5438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 17384 - 17481
Alignment:
Q  4 tacttcctccgatccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||| |||||| || |||||||||||||   |||||||||||| ||||| || |||||||||||| || | ||| |||||||||| | ||||||||||    
T  17384 tactccctccggtctttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgtagtaaatatagactagacacatcactta 17481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 72000 - 71884
Alignment:
Q  3 atacttcctccgatccttattataagaaaaaa-ttgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcactta 101  Q
    |||||||||||||||||  |||| | |||||| ||||||| |||  ||||| |  ||||||||||||||| |   | ||||||||||||||||| | |||    
T  72000 atacttcctccgatcctatttattaaaaaaaagttgatttattaaattcattgtgtaattaatgtattttgtataaaatatagactaaatacataattta 71901  T
Q  102 cacaatgaaccaaaaaa 118  Q
     |||||||| |||||||    
T  71900 tacaatgaatcaaaaaa 71884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 154
Target Start/End: Complemental strand, 156899 - 156767
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactaaatacatcacttacacaatgaaccaaaaaagtc 121  Q
    |||||||||||||| |||||||||| ||||| || ||||||||||| ||  |     |||||||| ||||| |||  |||  |||||||  ||||||||     
T  156899 ttataagaaaaaatagattttttagtttcattgagtaattaatgtacttggtatagaatatagaccaaatatatcgtttatgcaatgaattaaaaaagtt 156800  T
Q  122 aattgtttcttataataaggaccggagagagta 154  Q
    || ||||||||||||  |||||||||| |||||    
T  156799 aaatgtttcttataaataggaccggagggagta 156767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 5923 - 5877
Alignment:
Q  22 ttataagaaaaaattgattttttaggttcatagaataattaatgtat 68  Q
    ||||||| ||||| ||||||||||||| ||| |||||||||||||||    
T  5923 ttataagcaaaaaatgattttttaggtacatggaataattaatgtat 5877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 16603 - 16660
Alignment:
Q  79 atatagactaaatacatcacttacacaatgaaccaaaaaagtcaattgtttcttataa 136  Q
    |||||||| |||||||| | ||| |||||||| ||||||||||||  |||||||||||    
T  16603 atatagaccaaatacattatttatacaatgaatcaaaaaagtcaaacgtttcttataa 16660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University