View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3816_high_2 (Length: 387)

Name: NF3816_high_2
Description: NF3816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3816_high_2
NF3816_high_2
[»] chr1 (79 HSPs)
chr1 (146-285)||(10577676-10577814)
chr1 (19-129)||(4428599-4428709)
chr1 (287-387)||(4428704-4428804)
chr1 (130-285)||(25934574-25934745)
chr1 (19-123)||(4439828-4439932)
chr1 (130-290)||(46348319-46348478)
chr1 (146-285)||(41597411-41597549)
chr1 (179-286)||(12918957-12919064)
chr1 (179-285)||(30749852-30749958)
chr1 (179-285)||(30771303-30771409)
chr1 (187-285)||(37598852-37598949)
chr1 (159-284)||(42359391-42359516)
chr1 (214-285)||(32461394-32461465)
chr1 (130-285)||(51409983-51410143)
chr1 (159-284)||(1486646-1486776)
chr1 (187-285)||(18337349-18337447)
chr1 (148-285)||(22515828-22515964)
chr1 (187-281)||(5898211-5898305)
chr1 (159-284)||(29163323-29163448)
chr1 (130-285)||(36878419-36878584)
chr1 (19-107)||(18991172-18991260)
chr1 (215-291)||(47989556-47989632)
chr1 (185-272)||(40181889-40181976)
chr1 (159-285)||(1815249-1815375)
chr1 (187-285)||(40258874-40258972)
chr1 (215-285)||(40917808-40917878)
chr1 (187-285)||(52903269-52903364)
chr1 (159-285)||(2896062-2896188)
chr1 (215-285)||(9828103-9828173)
chr1 (185-285)||(27965941-27966039)
chr1 (181-282)||(39130711-39130812)
chr1 (221-285)||(31015091-31015155)
chr1 (223-285)||(6427531-6427593)
chr1 (187-284)||(16297223-16297322)
chr1 (167-285)||(38078602-38078720)
chr1 (167-285)||(45534131-45534248)
chr1 (144-285)||(6414932-6415082)
chr1 (185-285)||(7918155-7918252)
chr1 (185-285)||(34712324-34712424)
chr1 (185-232)||(1864874-1864921)
chr1 (214-285)||(36906055-36906125)
chr1 (215-281)||(9629834-9629900)
chr1 (185-285)||(9690214-9690313)
chr1 (187-241)||(13997903-13997957)
chr1 (187-273)||(18190061-18190147)
chr1 (219-285)||(18556386-18556452)
chr1 (215-285)||(21032265-21032335)
chr1 (181-231)||(39953141-39953191)
chr1 (250-288)||(48415664-48415702)
chr1 (185-234)||(14332634-14332683)
chr1 (185-226)||(34371731-34371772)
chr1 (185-226)||(44482248-44482289)
chr1 (185-284)||(11412709-11412809)
chr1 (188-232)||(13436479-13436523)
chr1 (237-285)||(15765828-15765876)
chr1 (215-274)||(6612112-6612171)
chr1 (185-232)||(9709838-9709885)
chr1 (186-237)||(17705576-17705626)
chr1 (167-222)||(34315712-34315767)
chr1 (215-285)||(34741894-34741964)
chr1 (185-264)||(43492456-43492535)
chr1 (235-285)||(1704936-1704986)
chr1 (215-285)||(5944342-5944412)
chr1 (243-285)||(6574053-6574095)
chr1 (204-274)||(8842666-8842736)
chr1 (130-164)||(10577814-10577848)
chr1 (157-231)||(12443456-12443529)
chr1 (206-256)||(21530728-21530778)
chr1 (187-281)||(26830608-26830701)
chr1 (215-285)||(31694640-31694710)
chr1 (130-164)||(38078735-38078769)
chr1 (185-226)||(20157350-20157391)
chr1 (187-236)||(22881606-22881655)
chr1 (157-226)||(24577186-24577255)
chr1 (185-226)||(25361904-25361945)
chr1 (130-163)||(48548042-48548075)
chr1 (245-285)||(10572535-10572575)
chr1 (214-285)||(32899937-32900009)
chr1 (249-285)||(35702543-35702579)
[»] chr3 (79 HSPs)
chr3 (130-285)||(13845466-13845612)
chr3 (159-285)||(35222930-35223056)
chr3 (184-267)||(2941575-2941658)
chr3 (19-129)||(9494846-9494956)
chr3 (187-285)||(40993276-40993374)
chr3 (130-226)||(14027961-14028066)
chr3 (130-285)||(20503430-20503583)
chr3 (187-285)||(55401095-55401193)
chr3 (187-284)||(28918021-28918120)
chr3 (185-285)||(8789489-8789591)
chr3 (21-119)||(41985598-41985696)
chr3 (187-285)||(10954972-10955073)
chr3 (19-129)||(9407334-9407444)
chr3 (202-287)||(15864868-15864952)
chr3 (187-285)||(18426969-18427067)
chr3 (157-285)||(27505236-27505369)
chr3 (215-285)||(41961580-41961650)
chr3 (215-284)||(4987222-4987291)
chr3 (46-123)||(41980849-41980926)
chr3 (191-279)||(3631708-3631796)
chr3 (19-111)||(9617519-9617611)
chr3 (203-273)||(7171537-7171607)
chr3 (52-122)||(9336541-9336611)
chr3 (228-286)||(15999950-16000008)
chr3 (215-285)||(25064966-25065036)
chr3 (185-247)||(25093520-25093582)
chr3 (20-129)||(9425542-9425651)
chr3 (185-285)||(11251996-11252094)
chr3 (133-287)||(24633341-24633498)
chr3 (185-285)||(4466541-4466641)
chr3 (185-284)||(24204983-24205082)
chr3 (189-284)||(25775531-25775624)
chr3 (187-284)||(29508464-29508567)
chr3 (186-285)||(8842348-8842447)
chr3 (34-129)||(9655395-9655490)
chr3 (24-111)||(9695672-9695759)
chr3 (146-285)||(26492146-26492284)
chr3 (222-285)||(34185053-34185116)
chr3 (29-111)||(9343823-9343905)
chr3 (215-285)||(14209172-14209242)
chr3 (187-232)||(7928470-7928515)
chr3 (52-108)||(9329837-9329893)
chr3 (167-231)||(13414469-13414533)
chr3 (221-285)||(14216957-14217021)
chr3 (221-285)||(14223086-14223150)
chr3 (216-287)||(37077418-37077490)
chr3 (165-285)||(51206294-51206414)
chr3 (34-129)||(9646402-9646497)
chr3 (19-129)||(9397753-9397863)
chr3 (215-285)||(15796224-15796294)
chr3 (185-247)||(45451571-45451633)
chr3 (134-232)||(49505148-49505245)
chr3 (159-232)||(8383249-8383322)
chr3 (201-241)||(6780404-6780444)
chr3 (63-111)||(9352913-9352961)
chr3 (19-111)||(9377054-9377146)
chr3 (59-111)||(9448322-9448374)
chr3 (221-285)||(10690193-10690257)
chr3 (187-282)||(11665964-11666070)
chr3 (215-259)||(14832158-14832202)
chr3 (187-247)||(20389636-20389694)
chr3 (185-286)||(32804484-32804581)
chr3 (214-285)||(55213020-55213091)
chr3 (130-164)||(750698-750732)
chr3 (243-285)||(4990913-4990955)
chr3 (19-129)||(9416541-9416651)
chr3 (186-232)||(11507469-11507515)
chr3 (181-227)||(38731232-38731278)
chr3 (235-285)||(40052380-40052430)
chr3 (185-246)||(7614396-7614456)
chr3 (130-163)||(17568750-17568783)
chr3 (237-285)||(1389908-1389956)
chr3 (19-75)||(9402347-9402403)
chr3 (19-75)||(9420586-9420642)
chr3 (214-285)||(25074841-25074913)
chr3 (159-223)||(26508102-26508166)
chr3 (214-285)||(27903684-27903756)
chr3 (242-286)||(34910392-34910436)
chr3 (225-285)||(49651717-49651777)
[»] chr2 (60 HSPs)
chr2 (143-285)||(24009274-24009413)
chr2 (159-285)||(20242668-20242794)
chr2 (157-285)||(36096305-36096444)
chr2 (19-123)||(20694345-20694449)
chr2 (162-284)||(2438661-2438783)
chr2 (130-285)||(41843405-41843564)
chr2 (130-285)||(37558941-37559095)
chr2 (201-285)||(28596503-28596587)
chr2 (146-285)||(34784912-34785061)
chr2 (130-285)||(38117100-38117260)
chr2 (159-285)||(18840954-18841080)
chr2 (216-285)||(26769571-26769640)
chr2 (204-285)||(34993923-34994004)
chr2 (187-278)||(5040754-5040845)
chr2 (188-267)||(5367213-5367292)
chr2 (187-273)||(12224243-12224329)
chr2 (187-285)||(15972893-15972991)
chr2 (215-285)||(30717460-30717530)
chr2 (215-285)||(35056927-35056997)
chr2 (215-285)||(37419802-37419872)
chr2 (185-282)||(37411188-37411285)
chr2 (216-284)||(19942314-19942382)
chr2 (230-285)||(18054717-18054772)
chr2 (220-285)||(11223794-11223858)
chr2 (146-226)||(18054803-18054883)
chr2 (221-285)||(42511323-42511387)
chr2 (215-285)||(32749755-32749825)
chr2 (179-232)||(20922922-20922975)
chr2 (159-279)||(21624258-21624374)
chr2 (216-285)||(27084318-27084387)
chr2 (201-285)||(34006931-34007016)
chr2 (187-232)||(34691799-34691844)
chr2 (187-232)||(34714211-34714256)
chr2 (250-286)||(18255944-18255980)
chr2 (146-218)||(21616742-21616813)
chr2 (215-286)||(23354581-23354652)
chr2 (187-247)||(30404829-30404889)
chr2 (168-260)||(43585971-43586063)
chr2 (159-226)||(15909632-15909699)
chr2 (215-285)||(22084757-22084830)
chr2 (187-266)||(31808097-31808176)
chr2 (159-225)||(11223864-11223930)
chr2 (222-284)||(15657930-15657992)
chr2 (130-164)||(21374773-21374807)
chr2 (215-284)||(23354926-23354995)
chr2 (130-164)||(26769463-26769497)
chr2 (191-273)||(29176446-29176528)
chr2 (215-285)||(44860379-44860449)
chr2 (187-232)||(19536391-19536436)
chr2 (160-236)||(31284041-31284118)
chr2 (185-226)||(44860338-44860379)
chr2 (146-282)||(6940235-6940370)
chr2 (237-285)||(10535686-10535734)
chr2 (222-274)||(14996171-14996222)
chr2 (185-225)||(18889592-18889632)
chr2 (130-162)||(27447082-27447114)
chr2 (160-220)||(28524419-28524479)
chr2 (130-162)||(31283994-31284026)
chr2 (185-225)||(38355888-38355928)
chr2 (202-242)||(40361738-40361778)
[»] chr8 (53 HSPs)
chr8 (146-285)||(43737752-43737892)
chr8 (167-285)||(3951477-3951596)
chr8 (146-285)||(34450962-34451116)
chr8 (185-284)||(3025569-3025668)
chr8 (130-285)||(36450695-36450849)
chr8 (185-285)||(33405325-33405425)
chr8 (201-284)||(926730-926813)
chr8 (184-285)||(26902105-26902217)
chr8 (130-285)||(14134663-14134817)
chr8 (185-284)||(20679337-20679436)
chr8 (130-281)||(31109463-31109613)
chr8 (185-283)||(40332209-40332307)
chr8 (216-285)||(29447040-29447109)
chr8 (143-282)||(5813569-5813707)
chr8 (215-285)||(22652035-22652105)
chr8 (215-285)||(29510234-29510304)
chr8 (185-285)||(4786279-4786379)
chr8 (185-285)||(37283756-37283851)
chr8 (204-278)||(126295-126369)
chr8 (187-285)||(18407739-18407837)
chr8 (187-285)||(31557016-31557114)
chr8 (174-285)||(18964184-18964308)
chr8 (157-231)||(13844591-13844665)
chr8 (215-285)||(15816059-15816129)
chr8 (221-285)||(8343381-8343445)
chr8 (221-285)||(16641910-16641974)
chr8 (214-286)||(24205748-24205820)
chr8 (157-233)||(31236570-31236646)
chr8 (222-285)||(6065587-6065650)
chr8 (215-285)||(21465471-21465541)
chr8 (215-285)||(28745557-28745627)
chr8 (215-285)||(29447503-29447573)
chr8 (185-231)||(34897103-34897149)
chr8 (180-285)||(24413500-24413605)
chr8 (201-273)||(8293859-8293931)
chr8 (226-274)||(22943301-22943349)
chr8 (202-285)||(39820464-39820546)
chr8 (222-285)||(4673355-4673418)
chr8 (214-285)||(11803317-11803388)
chr8 (187-226)||(11927086-11927125)
chr8 (130-241)||(22595952-22596068)
chr8 (185-256)||(38079017-38079088)
chr8 (187-233)||(4948672-4948718)
chr8 (188-226)||(8847277-8847315)
chr8 (243-285)||(13436911-13436953)
chr8 (187-241)||(20873089-20873143)
chr8 (215-261)||(26915200-26915246)
chr8 (249-286)||(13009422-13009459)
chr8 (189-241)||(9414860-9414912)
chr8 (221-281)||(22197676-22197736)
chr8 (179-231)||(28747430-28747482)
chr8 (206-270)||(44462151-44462215)
chr8 (206-270)||(44469684-44469748)
[»] chr5 (57 HSPs)
chr5 (146-285)||(6401478-6401627)
chr5 (159-282)||(30098982-30099105)
chr5 (158-285)||(21814252-21814390)
chr5 (187-285)||(21576686-21576784)
chr5 (182-285)||(42029767-42029870)
chr5 (185-284)||(30502330-30502429)
chr5 (185-284)||(30542673-30542772)
chr5 (146-284)||(21190998-21191135)
chr5 (130-225)||(32426870-32426965)
chr5 (187-285)||(43564901-43564999)
chr5 (185-285)||(28588615-28588715)
chr5 (167-283)||(19452998-19453125)
chr5 (211-283)||(39268541-39268613)
chr5 (167-222)||(39758272-39758327)
chr5 (215-285)||(21522809-21522879)
chr5 (215-285)||(21533375-21533445)
chr5 (215-285)||(21542089-21542159)
chr5 (185-290)||(17123066-17123170)
chr5 (185-281)||(21194068-21194164)
chr5 (201-273)||(26312803-26312875)
chr5 (157-285)||(42893350-42893478)
chr5 (159-285)||(31084315-31084446)
chr5 (185-284)||(18421779-18421882)
chr5 (215-285)||(39698600-39698670)
chr5 (185-285)||(14873535-14873640)
chr5 (185-284)||(23015926-23016030)
chr5 (221-284)||(43001859-43001922)
chr5 (204-254)||(23012380-23012430)
chr5 (190-282)||(4105282-4105374)
chr5 (215-283)||(18592132-18592200)
chr5 (185-285)||(27932253-27932353)
chr5 (221-285)||(30098391-30098455)
chr5 (215-274)||(15382533-15382592)
chr5 (215-285)||(7677764-7677834)
chr5 (159-285)||(32630676-32630802)
chr5 (185-226)||(3966521-3966562)
chr5 (187-236)||(15884008-15884057)
chr5 (215-284)||(19579760-19579829)
chr5 (146-285)||(6770523-6770654)
chr5 (185-236)||(16203785-16203836)
chr5 (214-285)||(16304367-16304438)
chr5 (157-232)||(34879340-34879415)
chr5 (187-226)||(37328844-37328883)
chr5 (237-284)||(41995534-41995581)
chr5 (215-285)||(3966562-3966632)
chr5 (187-237)||(6247642-6247692)
chr5 (130-164)||(15382423-15382457)
chr5 (235-285)||(23289999-23290049)
chr5 (226-284)||(24238603-24238661)
chr5 (215-285)||(32766873-32766943)
chr5 (220-282)||(36642696-36642757)
chr5 (185-226)||(6471889-6471930)
chr5 (222-285)||(19820329-19820389)
chr5 (185-226)||(41091257-41091298)
chr5 (234-278)||(17088358-17088402)
chr5 (249-285)||(35017125-35017161)
chr5 (221-285)||(40000494-40000558)
[»] chr4 (65 HSPs)
chr4 (146-285)||(5414102-5414251)
chr4 (159-285)||(23292927-23293053)
chr4 (179-285)||(19097836-19097941)
chr4 (159-281)||(49431017-49431140)
chr4 (215-286)||(30982807-30982878)
chr4 (187-285)||(28964189-28964287)
chr4 (185-285)||(8423659-8423759)
chr4 (167-285)||(46083921-46084050)
chr4 (215-285)||(12323968-12324038)
chr4 (203-285)||(12895215-12895297)
chr4 (187-285)||(34306745-34306843)
chr4 (187-285)||(715546-715646)
chr4 (187-285)||(752872-752972)
chr4 (216-285)||(24613631-24613700)
chr4 (185-285)||(35161054-35161154)
chr4 (202-285)||(2361916-2361999)
chr4 (187-282)||(12797282-12797377)
chr4 (162-241)||(54580008-54580087)
chr4 (187-285)||(16073414-16073512)
chr4 (187-285)||(35157926-35158024)
chr4 (185-285)||(36635342-36635448)
chr4 (221-285)||(3947702-3947766)
chr4 (220-286)||(848015-848081)
chr4 (215-285)||(19482727-19482797)
chr4 (215-285)||(19500788-19500858)
chr4 (187-256)||(29205464-29205533)
chr4 (187-244)||(36509074-36509131)
chr4 (187-236)||(40179626-40179675)
chr4 (195-291)||(20950362-20950458)
chr4 (186-285)||(4672026-4672125)
chr4 (167-274)||(21945503-21945610)
chr4 (232-283)||(28084589-28084640)
chr4 (226-285)||(29205527-29205586)
chr4 (215-285)||(53381531-53381602)
chr4 (223-285)||(32273462-32273524)
chr4 (159-221)||(40613442-40613504)
chr4 (187-285)||(42640549-42640642)
chr4 (187-284)||(4157169-4157266)
chr4 (187-284)||(4157456-4157553)
chr4 (221-286)||(14465005-14465070)
chr4 (130-226)||(30298910-30299006)
chr4 (130-226)||(30327778-30327874)
chr4 (146-226)||(13783261-13783340)
chr4 (225-285)||(18966567-18966627)
chr4 (250-289)||(4383449-4383488)
chr4 (185-236)||(10499260-10499311)
chr4 (168-231)||(16189710-16189773)
chr4 (210-285)||(23861370-23861445)
chr4 (215-285)||(24343560-24343631)
chr4 (179-226)||(44132644-44132691)
chr4 (185-247)||(8402721-8402783)
chr4 (185-247)||(9996858-9996920)
chr4 (215-285)||(22234820-22234890)
chr4 (130-164)||(23293065-23293099)
chr4 (215-281)||(30838269-30838335)
chr4 (228-285)||(3064869-3064926)
chr4 (159-232)||(6879459-6879532)
chr4 (130-226)||(12895116-12895210)
chr4 (235-284)||(22440559-22440608)
chr4 (174-230)||(42014965-42015022)
chr4 (249-285)||(5775305-5775341)
chr4 (185-225)||(5775359-5775399)
chr4 (175-247)||(13307885-13307957)
chr4 (143-226)||(22234890-22234973)
chr4 (185-285)||(30103298-30103397)
[»] chr6 (69 HSPs)
chr6 (159-285)||(18367828-18367965)
chr6 (158-285)||(16488520-16488658)
chr6 (146-285)||(13789134-13789272)
chr6 (146-285)||(13797753-13797891)
chr6 (130-285)||(17841530-17841684)
chr6 (187-285)||(34595154-34595252)
chr6 (146-286)||(9658859-9658999)
chr6 (130-285)||(28152063-28152216)
chr6 (162-285)||(17327591-17327719)
chr6 (157-283)||(32978842-32978969)
chr6 (185-283)||(7996325-7996419)
chr6 (185-283)||(8022382-8022476)
chr6 (221-284)||(12696383-12696446)
chr6 (134-286)||(5626640-5626792)
chr6 (167-285)||(7377979-7378097)
chr6 (187-285)||(33001230-33001328)
chr6 (185-284)||(7265535-7265634)
chr6 (215-285)||(8365449-8365519)
chr6 (215-285)||(10339055-10339125)
chr6 (187-285)||(28715315-28715413)
chr6 (146-285)||(8776909-8777052)
chr6 (185-285)||(13360314-13360413)
chr6 (221-285)||(31384984-31385048)
chr6 (185-285)||(32511607-32511707)
chr6 (206-285)||(4877982-4878060)
chr6 (215-285)||(16766756-16766826)
chr6 (159-236)||(19040344-19040421)
chr6 (186-238)||(7740660-7740712)
chr6 (185-285)||(13364646-13364746)
chr6 (204-243)||(30851637-30851676)
chr6 (170-285)||(4388088-4388198)
chr6 (159-285)||(7977771-7977897)
chr6 (157-226)||(26562679-26562748)
chr6 (21-129)||(7041466-7041574)
chr6 (215-285)||(34446618-34446689)
chr6 (215-285)||(7248417-7248487)
chr6 (215-285)||(9107300-9107370)
chr6 (187-285)||(24645501-24645599)
chr6 (185-226)||(9025494-9025535)
chr6 (185-241)||(31579212-31579266)
chr6 (132-164)||(4118412-4118444)
chr6 (130-285)||(16833267-16833426)
chr6 (187-274)||(853811-853898)
chr6 (185-232)||(5732504-5732551)
chr6 (202-285)||(6898222-6898305)
chr6 (187-226)||(7027262-7027301)
chr6 (250-285)||(10649371-10649406)
chr6 (130-164)||(7938062-7938096)
chr6 (215-285)||(8714039-8714109)
chr6 (160-226)||(8931602-8931668)
chr6 (160-226)||(9107370-9107436)
chr6 (185-227)||(9629401-9629443)
chr6 (201-231)||(21924930-21924960)
chr6 (231-285)||(31959214-31959268)
chr6 (21-82)||(7012784-7012845)
chr6 (88-129)||(7029850-7029891)
chr6 (185-283)||(8389411-8389513)
chr6 (88-129)||(9159533-9159574)
chr6 (88-129)||(9170854-9170895)
chr6 (185-226)||(9617452-9617493)
chr6 (187-240)||(29020932-29020985)
chr6 (167-247)||(1191679-1191759)
chr6 (187-231)||(1700372-1700416)
chr6 (130-162)||(5970183-5970215)
chr6 (237-285)||(7938170-7938218)
chr6 (146-226)||(9027158-9027237)
chr6 (214-266)||(9522949-9523001)
chr6 (221-285)||(9629448-9629512)
chr6 (221-281)||(24138485-24138545)
[»] chr7 (58 HSPs)
chr7 (179-285)||(18212974-18213080)
chr7 (174-283)||(39138451-39138560)
chr7 (130-285)||(15680773-15680927)
chr7 (185-285)||(32287404-32287504)
chr7 (130-285)||(9778454-9778623)
chr7 (185-285)||(20549809-20549909)
chr7 (185-285)||(21880170-21880270)
chr7 (159-285)||(5409772-5409903)
chr7 (204-285)||(598245-598326)
chr7 (187-285)||(43027405-43027508)
chr7 (215-285)||(24339701-24339771)
chr7 (202-285)||(21864843-21864926)
chr7 (221-285)||(32093955-32094020)
chr7 (185-257)||(5835265-5835337)
chr7 (185-236)||(9482952-9483003)
chr7 (185-275)||(12278853-12278943)
chr7 (218-285)||(25822717-25822784)
chr7 (187-274)||(26733324-26733411)
chr7 (159-285)||(22484017-22484143)
chr7 (191-285)||(33994236-33994330)
chr7 (181-285)||(18035806-18035909)
chr7 (203-285)||(1433490-1433577)
chr7 (187-278)||(41020516-41020607)
chr7 (156-285)||(21568562-21568692)
chr7 (159-285)||(25481894-25482020)
chr7 (185-275)||(27093364-27093454)
chr7 (185-275)||(27184847-27184937)
chr7 (185-285)||(1401043-1401141)
chr7 (216-285)||(7438766-7438835)
chr7 (181-234)||(19213817-19213870)
chr7 (185-226)||(22602710-22602751)
chr7 (228-285)||(29763130-29763187)
chr7 (188-236)||(640134-640182)
chr7 (214-285)||(7133213-7133285)
chr7 (243-283)||(8842282-8842322)
chr7 (221-281)||(13770750-13770810)
chr7 (201-285)||(24105712-24105796)
chr7 (130-226)||(25791617-25791711)
chr7 (185-232)||(3721111-3721158)
chr7 (218-285)||(4794951-4795018)
chr7 (187-266)||(8234166-8234245)
chr7 (181-224)||(17851445-17851488)
chr7 (223-285)||(17852056-17852118)
chr7 (243-285)||(35862027-35862069)
chr7 (167-212)||(1656676-1656721)
chr7 (204-285)||(3554447-3554528)
chr7 (221-286)||(20545184-20545249)
chr7 (181-230)||(24146830-24146879)
chr7 (215-284)||(26033392-26033461)
chr7 (208-277)||(41918906-41918975)
chr7 (221-285)||(2334314-2334378)
chr7 (237-285)||(6490786-6490834)
chr7 (130-286)||(7197237-7197392)
chr7 (215-247)||(9933332-9933364)
chr7 (201-285)||(10359633-10359717)
chr7 (201-285)||(11738152-11738236)
chr7 (237-285)||(28155624-28155672)
chr7 (130-226)||(32308084-32308179)
[»] scaffold0623 (1 HSPs)
scaffold0623 (159-285)||(5926-6063)
[»] scaffold0652 (1 HSPs)
scaffold0652 (187-285)||(403-501)
[»] scaffold0361 (1 HSPs)
scaffold0361 (143-285)||(14506-14645)
[»] scaffold0116 (1 HSPs)
scaffold0116 (146-226)||(9878-9957)
[»] scaffold0306 (1 HSPs)
scaffold0306 (215-284)||(13454-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (215-284)||(21804-21873)
[»] scaffold0083 (1 HSPs)
scaffold0083 (201-285)||(45471-45555)
[»] scaffold0050 (1 HSPs)
scaffold0050 (187-283)||(70298-70394)
[»] scaffold0053 (1 HSPs)
scaffold0053 (202-285)||(8833-8916)
[»] scaffold0003 (1 HSPs)
scaffold0003 (215-285)||(241653-241723)
[»] scaffold0793 (1 HSPs)
scaffold0793 (187-285)||(4822-4922)
[»] scaffold0475 (1 HSPs)
scaffold0475 (202-285)||(3343-3426)
[»] scaffold0380 (1 HSPs)
scaffold0380 (215-285)||(8649-8719)
[»] scaffold0019 (1 HSPs)
scaffold0019 (215-285)||(71784-71854)
[»] scaffold0004 (1 HSPs)
scaffold0004 (220-286)||(92875-92941)
[»] scaffold0512 (1 HSPs)
scaffold0512 (204-285)||(4977-5058)
[»] scaffold0450 (1 HSPs)
scaffold0450 (215-285)||(8565-8635)
[»] scaffold0123 (1 HSPs)
scaffold0123 (158-222)||(44529-44593)
[»] scaffold0044 (1 HSPs)
scaffold0044 (215-279)||(53239-53303)
[»] scaffold0022 (1 HSPs)
scaffold0022 (185-285)||(90861-90961)
[»] scaffold0136 (1 HSPs)
scaffold0136 (215-285)||(3779-3849)
[»] scaffold0086 (1 HSPs)
scaffold0086 (215-285)||(2987-3057)
[»] scaffold0036 (2 HSPs)
scaffold0036 (215-284)||(9678-9747)
scaffold0036 (185-226)||(9747-9788)
[»] scaffold0279 (1 HSPs)
scaffold0279 (130-241)||(17737-17844)
[»] scaffold0227 (1 HSPs)
scaffold0227 (241-285)||(15045-15089)
[»] scaffold0697 (1 HSPs)
scaffold0697 (206-256)||(1683-1733)
[»] scaffold0154 (1 HSPs)
scaffold0154 (215-285)||(13472-13542)
[»] scaffold0103 (1 HSPs)
scaffold0103 (140-241)||(51785-51888)
[»] scaffold0057 (1 HSPs)
scaffold0057 (215-285)||(24083-24154)
[»] scaffold0020 (1 HSPs)
scaffold0020 (185-226)||(135312-135353)
[»] scaffold0008 (1 HSPs)
scaffold0008 (215-284)||(263303-263372)


Alignment Details
Target: chr1 (Bit Score: 112; Significance: 2e-56; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 10577814 - 10577676
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||    
T  10577814 gacacggacaccg-acacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcgggggcggacacgacgcgtgtctgac 10577716  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10577715 acggggacacgccttatccaaggagtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 4428599 - 4428709
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4428599 aataaagatgacacaattccctttagtaacagacaactcagaagcagaggcagaaaacaaacatccattccccaaaaacaaaaccctatcccccaaactc 4428698  T
Q  119 gtcaatttcac 129  Q
    |||||||||||    
T  4428699 gtcaatttcac 4428709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 287 - 387
Target Start/End: Original strand, 4428704 - 4428804
Alignment:
Q  287 tttcacccatttatgcgccttctcatcaagcctaaacaccttaatccaaaaaacactgtcaccactagcaaaacctaaaaactcataaatgaccactagc 386  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4428704 tttcacccatttacgcgccttctcatcaagcctaaacaccttaatccaaaaaacactgtcaccactagcaaaacctaaaaactcataaatgaccactagc 4428803  T
Q  387 a 387  Q
    |    
T  4428804 a 4428804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 130 - 285
Target Start/End: Original strand, 25934574 - 25934745
Alignment:
Q  130 atgaagcactgatacggacacggacaccggaca-----cgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgt------ 218  Q
    ||||||||| |||||||||||||||||||||||     ||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||          
T  25934574 atgaagcacggatacggacacggacaccggacatgacacgccgacacagctaaattttctagaaaatcacaaaatacagtgtaattatatgtgtcggtat 25934673  T
Q  219 -----cggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
         |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25934674 cgtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 25934745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 4439828 - 4439932
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    |||||||||||||| ||||||||||| |||| |||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4439828 aataaagatgacacaattccctttagaaacacacaaatccgaagcagaagcagaaaacgaacatccattccccaaaaacaaaaccctatctcccaaactc 4439927  T
Q  119 gtcaa 123  Q
     ||||    
T  4439928 atcaa 4439932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 130 - 290
Target Start/End: Complemental strand, 46348478 - 46348319
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| ||||||||||||||||| | |||||| |||||||||||   ||| | ||||||| | |||  |||||||||| | |||||||||||||||    
T  46348478 atgaagcacggatacggacacggacactg-acacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggac 46348380  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatattttc 290  Q
    |||||||||||| ||||| | ||||||||| |||| ||| |||||||||||||||| ||||    
T  46348379 acgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatagtttc 46348319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 41597549 - 41597411
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgca-gtgtaattatatgtgtcggtgtcggacacgacacgtgtctga 244  Q
    ||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||  | ||||   | | |||||| ||||||||||||||||||||||||    
T  41597549 gacacggacaccg-acacgccaacacagctaaattttctagaaaatcacaaaatatatgtgttggtgt-tgtgtccgtgtcggacacgacacgtgtctga 41597452  T
Q  245 cacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||| |||| |||||||||||||||| ||||||||||    
T  41597451 cacggggatacgctttatccaaggagtgtctgtgcttcata 41597411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 12918957 - 12919064
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||| ||||||| ||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| || ||||| ||||    
T  12918957 ttttttagacaatcacataattcaatgtgattatatgtgttggtatcggacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtg 12919056  T
Q  279 cttcatat 286  Q
    ||||||||    
T  12919057 cttcatat 12919064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 30749852 - 30749958
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||| |||| ||||||| ||| |||| |||| | |||||||||| ||    
T  30749852 ttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgtttgacacgaggatacgcattattcgaggagtgtccatg 30749951  T
Q  279 cttcata 285  Q
    |||||||    
T  30749952 cttcata 30749958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 30771303 - 30771409
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||| |||| ||||||| ||| |||| |||| | |||||||||| ||    
T  30771303 ttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgtttgacacgaggatacgcattattcgaggagtgtccatg 30771402  T
Q  279 cttcata 285  Q
    |||||||    
T  30771403 cttcata 30771409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 37598852 - 37598949
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||| |||| ||||||||||||||||||||    
T  37598852 aaaatcacaaatt-cagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcata 37598949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 42359516 - 42359391
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    |||||||||||||| ||||   ||| | ||||||||||||| ||||||||||| | |||||||||||||||| |||  ||||| ||||| ||||||||||    
T  42359516 gacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcc 42359417  T
Q  259 ttatccaaggagtgtccgtgcttcat 284  Q
    | |||| |||||||||||||||||||    
T  42359416 taatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 32461465 - 32461394
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  32461465 tgtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcata 32461394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 285
Target Start/End: Original strand, 51409983 - 51410143
Alignment:
Q  130 atgaagcactgatacggacacggacac----cggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 224  Q
    ||||||||| |||||||||||||||||    |||||| || |||||| |||| | |||  | ||||||||| ||| ||||||||||| | ||||||||||    
T  51409983 atgaagcacggatacggacacggacacaaaacggacatgccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgt 51410082  T
Q  225 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||| || ||||| | ||||||||| ||||||||||| | |||||||||||    
T  51410083 cggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcata 51410143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 1486776 - 1486646
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggggac 253  Q
    |||||||||||||||||||   ||| | ||||||||| ||| ||||||||||||| ||||||||||||     ||||||||||||||| ||||| |||||    
T  1486776 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggac 1486677  T
Q  254 acgccttatccaaggagtgtccgtgcttcat 284  Q
    |||||| |||| ||||||||| |||||||||    
T  1486676 acgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 18337349 - 18337447
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||| ||||||||| ||||| |||||| |||| |||| ||||||||||||||||||||    
T  18337349 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcata 18337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 285
Target Start/End: Complemental strand, 22515964 - 22515828
Alignment:
Q  148 cacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||| |||||||| |||||||||||   ||| | ||||||||| |||  |||||||||| | |||||||||||||||||||||| | || |||||    
T  22515964 cacggacac-ggacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacac 22515866  T
Q  248 ggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
     | ||||||||| |||| ||||||||||||||||||||    
T  22515865 cgagacacgcctaatccgaggagtgtccgtgcttcata 22515828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 187 - 281
Target Start/End: Complemental strand, 5898305 - 5898211
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    ||||||||| ||| ||||||||||||||| ||||||||| |||||||||||||||  |||| |||||||| || |||| ||||||||||||||||    
T  5898305 aaaatcacataattcagtgtaattatatgcgtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctt 5898211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 29163448 - 29163323
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| ||||| ||||||  |||  |||||||||| ||| || | |||||||||||||||||||||||||||||||||| ||||||| |||||||| |    
T  29163448 gacacgccgacaccgctaaaaatttaggaaaatcacataattcaatttaattatatgtgtcggtgtcggacacgacacgtgcctgacaccgggacacggc 29163349  T
Q  259 ttatccaaggagtgtccgtgcttcat 284  Q
    | |||  || ||||| ||||||||||    
T  29163348 taatcagagaagtgttcgtgcttcat 29163323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 130 - 285
Target Start/End: Original strand, 36878419 - 36878584
Alignment:
Q  130 atgaagcactgatacggacacggacaccg-----gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 224  Q
    ||||||||| ||||||||||||||||  |     ||||||| ||||| |||||   ||| ||||||||||| ||| ||||||||||||| ||||||||||    
T  36878419 atgaagcacggatacggacacggacatagacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 36878518  T
Q  225 cggacacgacacgtgtc-----tgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    | ||||||| || ||||      ||||||||||||||||| |||| ||||||||||||||||||||    
T  36878519 ctgacacgaaacatgtccgacacgacacggggacacgcctaatcccaggagtgtccgtgcttcata 36878584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 18991172 - 18991260
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctat 107  Q
    |||||||| ||||| |||||||||   |||||| || ||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  18991172 aataaagacgacacaattccctttgacaacagataaatcagaagcagaagcagaaaacgaacatccattccccaagaacaaaaccctat 18991260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 215 - 291
Target Start/End: Original strand, 47989556 - 47989632
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatattttca 291  Q
    |||||||||||||||||||||| |||||||||  ||||||||||| |||| |||||||||||||||||||| |||||    
T  47989556 gtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatagtttca 47989632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 40181889 - 40181976
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtg 272  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||| |||||||||  |||| ||||||||||| |||| |||||||    
T  40181889 agaaaatcacataattcagtgtaattatatgtatcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 1815249 - 1815375
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| ||||||  ||| | ||||| ||||||||| ||| ||||||||||| | ||||||||||| |||||||||| |||| ||||| ||||||||||    
T  1815249 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcc 1815348  T
Q  259 ttatccaaggagtgtccgtgcttcata 285  Q
    | |||  ||||||| ||||| ||||||    
T  1815349 taatctgaggagtgaccgtgattcata 1815375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 40258972 - 40258874
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| ||| ||||||||||| | ||||||||||| |||||||||| |||| |||||  |||||||||| |||| |||||||||| |||||||||    
T  40258972 aaaatcacataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 40917808 - 40917878
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||| |||| |||| |||||||||||||||    
T  40917808 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcata 40917878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 52903269 - 52903364
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||||    ||||| ||||| |||||||| ||||| | | ||||||||||||||||||    
T  52903269 aaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg---tgtgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcata 52903364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 2896188 - 2896062
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| ||||| |||||   ||| ||||||||||| ||| |||||||  ||||| |||||||||| ||||||||| ||||| || || ||||||| ||    
T  2896188 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtcagacacgacatgtgtccgagaccgggacacacc 2896089  T
Q  259 ttatccaaggagtgtccgtgcttcata 285  Q
    | ||||||| ||||||| || ||||||    
T  2896088 taatccaagaagtgtccatgtttcata 2896062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 9828103 - 9828173
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||| ||||||||||||||| ||||| |||||||| || |||| ||||||||||||||||||||    
T  9828103 gtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 9828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 27966039 - 27965941
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    |||||||||  |||| ||||||||||||||||  | ||||| |||||| | |||| ||||||| ||||||||||| |||| |||||||||| ||||||||    
T  27966039 agaaaatcattaaattcagtgtaattatatgt--ccgtgtcagacacgcctcgtgcctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 27965942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 39130812 - 39130711
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgct 280  Q
    ||||||||||| | | |||  |||||||||||||||||||||||||||||| |||||||   ||||  ||||||||| | |||||| |||||||| ||||    
T  39130812 ttttagaaaattatataatttagtgtaattatatgtgtcggtgtcggacacaacacgtgctcgacattgggacacgcttaatccaaagagtgtccatgct 39130713  T
Q  281 tc 282  Q
    ||    
T  39130712 tc 39130711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 31015091 - 31015155
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||  || ||||||||||    
T  31015091 gtgtcggacacgacacgtgtctgacatcgggacacgcctaatccaaggaggatcagtgcttcata 31015155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 6427531 - 6427593
Alignment:
Q  223 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||| ||||| ||||||||||| |||  | ||||||||||||||||||    
T  6427531 gtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcata 6427593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 284
Target Start/End: Complemental strand, 16297322 - 16297223
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtc---ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||||||| ||||||||||| |  ||||   |||||||||||||||  ||||| |||||  |||||||||| |||| ||||||||||||||||||    
T  16297322 aaaatcacaaaattcagtgtaattacaa-tgtccggggtgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttca 16297224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 38078720 - 38078602
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    |||||||||||   ||| | ||||||||| ||| || |||||||| | |||||||||||||||||||||| |||   ||||  |||||||||| |||| |    
T  38078720 gacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccga 38078621  T
Q  267 ggagtgtccgtgcttcata 285  Q
    ||||| | |||||||||||    
T  38078620 ggagtattcgtgcttcata 38078602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 45534248 - 45534131
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    ||||||||||||||||| ||||||||||| |||  ||||||| ||||| ||||||||| |      ||| ||||||||||  |||||||||||||||| |    
T  45534248 gacacagctaaattttt-agaaaatcacataatttagtgtaagtatatatgtcggtgtggtgtggtacatgtgtctgacatagggacacgccttatccga 45534150  T
Q  267 ggagtgtccgtgcttcata 285  Q
    |||||||  ||||||||||    
T  45534149 ggagtgtttgtgcttcata 45534131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 144 - 285
Target Start/End: Complemental strand, 6415082 - 6414932
Alignment:
Q  144 cggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc----------ggacacga 233  Q
    ||||||||||||| | |||||| ||||  ||||| | ||| ||||||||||| ||| |||| |||||| |||||||||||||          ||||||||    
T  6415082 cggacacggacactg-acacgccgacatcgctaattatttgagaaaatcacataatacagtttaattagatgtgtcggtgtcattcgatgtcggacacga 6414984  T
Q  234 cacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||| | |||||   | |||| ||||||||||||||||||||    
T  6414983 cacgtgtctgacaccgcgacacatttcatccgaggagtgtccgtgcttcata 6414932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 7918252 - 7918155
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||||| ||| ||||||||||||||||||| |||||| | ||    |||| ||||||||  |||||| ||| |||| ||||||||||||||||||    
T  7918252 agaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtca----acgtttctgacaccaggacacacctaatccgaggagtgtccgtgcttca 7918157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 34712424 - 34712324
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||| ||| |||  |||||||||||||||||| ||||||     ||||||||||  |||| |||||||| || || |||||||||||||||||||||    
T  34712424 agaaaataacataatttagtgtaattatatgtgtcagtgtcgtgtcggacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcat 34712325  T
Q  285 a 285  Q
    |    
T  34712324 a 34712324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 1864921 - 1864874
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  1864921 agaaaatcacataattcagtgtaattatatgtgtcggtgttggacacg 1864874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 36906055 - 36906125
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| |||||||||||||| || ||||||||| ||||||| ||| || ||| ||||||||||||||||||    
T  36906055 tgtgtcagtgtcggacacgacccgcgtctgacactgggacacacctaatgcaa-gagtgtccgtgcttcata 36906125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 9629900 - 9629834
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    |||||| ||||||||||||||| |||| ||||| |||||||| ||  |||||| |||||||||||||    
T  9629900 gtgtcgatgtcggacacgacacatgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 9629834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 9690313 - 9690214
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||||||  | ||||||||| ||||||||||| ||||| ||| |||||||||| ||||| ||||||||||| ||||   ||||||  ||||||||    
T  9690313 agaaaatcacaa--ttcagtgtaatcatatgtgtcggcgtcggccactgacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttca 9690216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 13997903 - 13997957
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 241  Q
    ||||||||| ||| |||||||||||||||||||||||| ||| ||||||| ||||    
T  13997903 aaaatcacataattcagtgtaattatatgtgtcggtgttggagacgacacatgtc 13997957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 273
Target Start/End: Complemental strand, 18190147 - 18190061
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 273  Q
    ||||| ||| ||| ||||||||||| | |||||| |||| ||||| ||||||||| ||||| ||||||| ||| |||| ||||||||    
T  18190147 aaaattacataattcagtgtaattacaagtgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccgaggagtgt 18190061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 18556452 - 18556386
Alignment:
Q  219 cggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||| ||| |||||||| || ||||| ||||||||||| |||| || |||||||||||||||||    
T  18556452 cggtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcata 18556386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 21032265 - 21032335
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| |||||||||||||||| ||||| ||||  | || |||||| |||||||||||||| ||||||||||    
T  21032265 gtgtgggtgtcggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgtctgtgcttcata 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 39953191 - 39953141
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||||||    
T  39953191 ttttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcggacac 39953141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 288
Target Start/End: Complemental strand, 48415702 - 48415664
Alignment:
Q  250 ggacacgccttatccaaggagtgtccgtgcttcatattt 288  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  48415702 ggacacgcctaatccaaggagtgtccgtgcttcatattt 48415664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 14332683 - 14332634
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgac 234  Q
    ||||||||||| |||  ||||||||||||||| |||||||||||||||||    
T  14332683 agaaaatcacataatttagtgtaattatatgtctcggtgtcggacacgac 14332634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 34371731 - 34371772
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  34371731 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 34371772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 44482248 - 44482289
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  44482248 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 44482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 11412809 - 11412709
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacga-cacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||| ||| ||| || ||| || ||| |||||||||| |||||| | || ||||| |||||  ||||| ||||||||| ||||||||||||||||||    
T  11412809 agaaaatgacataattcaatgtgatcataggtgtcggtgttggacaccaacatgtgtccgacactaggacatgccttatcctaggagtgtccgtgcttca 11412710  T
Q  284 t 284  Q
    |    
T  11412709 t 11412709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 13436479 - 13436523
Alignment:
Q  188 aaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||    
T  13436479 aaatcacataattcagtgtaattatatgtgttggtgtcggacacg 13436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 15765828 - 15765876
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| ||||||||||| |||| | ||||||||||||||||||    
T  15765828 gtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcata 15765876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 6612171 - 6612112
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    |||||| |||||||||||| | ||||| |||||  |||||||||| ||||||||||||||    
T  6612171 gtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 9709838 - 9709885
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||||||    
T  9709838 agaaaatcacataattcgttgtaattatatgtgtcggtgtcggacacg 9709885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 17705626 - 17705576
Alignment:
Q  186 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacg 237  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||| |||||||    
T  17705626 gaaaatcacataattcagtgtaattatatgtgtc-gtgtcggacgcgacacg 17705576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 34315712 - 34315767
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt 222  Q
    ||||||||||||||||||| ||||  ||| ||| | ||||||||||||||||||||    
T  34315712 gacacagctaaattttttaaaaaactacataattcggtgtaattatatgtgtcggt 34315767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 34741894 - 34741964
Alignment:
Q  215 gtgtcggtgtcggacacgaca-cgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| |||||| ||||||||| |||||| |||||||| |||||||| |||| | ||||||||||||||||||    
T  34741894 gtgttggtgtctgacacgacaacgtgtccgacacggg-acacgcctaatccgaagagtgtccgtgcttcata 34741964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 264
Target Start/End: Complemental strand, 43492535 - 43492456
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatcc 264  Q
    ||||||||||  ||| | |||||||||| |||||||||||| ||||| |||| |||| ||||| || |||||||| ||||    
T  43492535 agaaaatcacgtaattcggtgtaattatgtgtgtcggtgtcagacacaacacatgtccgacaccggcacacgcctaatcc 43492456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 1704986 - 1704936
Alignment:
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||| ||||| | ||||||||| ||||||||||||||| |||||||||    
T  1704986 acgtgtccgacaccgagacacgcctaatccaaggagtgtccatgcttcata 1704936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 5944342 - 5944412
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| || ||||||| |||| |||| ||||| |||| |||||| |||| |||||||| |||||||||||    
T  5944342 gtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcata 5944412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 6574053 - 6574095
Alignment:
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||    
T  6574053 gacactgggacacgcctaatccaaggagtgaccgtgcttcata 6574095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 8842736 - 8842666
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    ||||||||||||| | ||||||||||||||||||| || ||||   |||||||||| || ||| |||||||    
T  8842736 tgtaattatatgtattggtgtcggacacgacacgtatccgacatcaggacacgcctaattcaaagagtgtc 8842666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 10577848 - 10577814
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  10577848 atgaagcacggatacggacacggacaccggacacg 10577814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 12443529 - 12443456
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    ||||||||| |||||||||||   ||| ||||||||||| ||| |||||||||| |||||| | |||||||||||    
T  12443529 cggacacgccgacacagctaataatttgagaaaatcacataattcagtgtaattgtatgtgac-gtgtcggacac 12443456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 21530728 - 21530778
Alignment:
Q  206 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 256  Q
    |||||||| |||||||||||||||||||||| |||| |||||  |||||||    
T  21530728 taattataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 21530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 281
Target Start/End: Original strand, 26830608 - 26830701
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    ||||||||| |||  | |||||||||| |||||| |||| ||||| ||||||||  || || ||||||||||| |||  ||||||||||||||||    
T  26830608 aaaatcacataattaaatgtaattataagtgtcg-tgtcagacactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 31694710 - 31694640
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||| |||| | |  ||||| || |||||||| |||  ||||||||||||||||||||    
T  31694710 gtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcata 31694640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 38078769 - 38078735
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  38078769 atgaagcacggatacggacacggacaccggacacg 38078735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 20157391 - 20157350
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||    
T  20157391 agaaaatcacataattcagtgtaatcatatgtgtcggtgtcg 20157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 22881655 - 22881606
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    ||||||||| |||  |||||||||| | ||||||||||||||||||||||    
T  22881655 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacac 22881606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 24577255 - 24577186
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||||||||||||||| ||||   ||| | ||||||||| ||| ||||||||||| | ||||||||||||    
T  24577255 cggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 25361904 - 25361945
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||    
T  25361904 agaaaatcacataattcagtgtaattatatgtgtcagtgtcg 25361945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 48548075 - 48548042
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacac 163  Q
    ||||||||| ||||||||||||||||||||||||    
T  48548075 atgaagcacggatacggacacggacaccggacac 48548042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 10572575 - 10572535
Alignment:
Q  245 cacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  10572575 cacgtggacacgcctaattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 32899937 - 32900009
Alignment:
Q  214 tgtgtcggtgtcggaca-cgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||| |||| | |||| ||||| ||||||| ||| |||| |||| ||||| |||||||||    
T  32899937 tgtgtcggtgtcggacaccgacgcatgtcggacaccgggacacccctaatccgaggattgtccttgcttcata 32900009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 35702579 - 35702543
Alignment:
Q  249 gggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  35702579 gggacacgcctaatccgaggagtgtccgtgcttcata 35702543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 4e-54; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 130 - 285
Target Start/End: Complemental strand, 13845612 - 13845466
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| |||||||||||||||||||         |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13845612 atgaagcacggatacggacacggacaccg---------acacagttaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 13845522  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13845521 acgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcata 13845466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 35222930 - 35223056
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| |||||| ||||  |||||||||||||||| ||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  35222930 gacacgccgacacaactaacatttttagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgacacggggacacgct 35223029  T
Q  259 ttatccaaggagtgtccgtgcttcata 285  Q
    |||||| ||||||||||||||||||||    
T  35223030 ttatccgaggagtgtccgtgcttcata 35223056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 267
Target Start/End: Original strand, 2941575 - 2941658
Alignment:
Q  184 tagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaag 267  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||    
T  2941575 tagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacatggggatatgccttatccaag 2941658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 9494956 - 9494846
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    |||||||||||||| ||||||||| | |||  |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  9494956 aataaagatgacacaattccctttggaaacgcacaaatcagaagcagaagcagaaaacgaacatccattccccaagaacaaaaccctatcccctaaactc 9494857  T
Q  119 gtcaatttcac 129  Q
     |||| |||||    
T  9494856 atcaaattcac 9494846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 40993374 - 40993276
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| |||| |||||||||| |||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcata 40993276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 14027961 - 14028066
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg---------ctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcg 220  Q
    ||||||||| |||||||||||||||||||||||||         | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14027961 atgaagcacggatacggacacggacaccggacacgacacggacaccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcg 14028060  T
Q  221 gtgtcg 226  Q
    ||||||    
T  14028061 gtgtcg 14028066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 285
Target Start/End: Original strand, 20503430 - 20503583
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| |||||||||||| |||| | |||||| |||||| | ||   ||| | ||||| ||| ||| ||||||||||| | |||||||||| ||||    
T  20503430 atgaagcacggatacggacacg-acactg-acacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggac 20503527  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||| |||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  20503528 acgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 20503583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 55401095 - 55401193
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| |||  |||||||||| | ||||||||||||||||||||||||||| ||||| | ||||||||| |||| ||||||||||||||||||||    
T  55401095 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 55401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 28918021 - 28918120
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg--gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| ||| ||||||||||| | ||||||||||||  ||||||||||||||| ||||| ||||||||||| ||||||||||||||| ||||||||    
T  28918021 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 8789591 - 8789489
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg--acacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 282  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||||||  |||| |||| ||||| | ||||||||| |||| |||||||||||||||||    
T  8789591 agaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttc 8789492  T
Q  283 ata 285  Q
    |||    
T  8789491 ata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 41985598 - 41985696
Alignment:
Q  21 taaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcg 119  Q
    |||||||||||| ||| |||||   ||||||||| || |||||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||    
T  41985598 taaagatgacacaatttcctttgacaacagacaaatccgaagcagaagcagaaaacgaacatccattccccaagaacaaaactctatcccctaaactcg 41985696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 10954972 - 10955073
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaagg---agtgtccgtgcttca 283  Q
    ||||||||| ||| ||||||||| | | ||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||   |||||||||||||||    
T  10954972 aaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttca 10955071  T
Q  284 ta 285  Q
    ||    
T  10955072 ta 10955073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 9407334 - 9407444
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    |||||||| ||||| ||||||||| | |||| |||| || ||||| || |||||||| |||||||||||| | || ||||||||||||||||| ||||||    
T  9407334 aataaagaagacacaattccctttggcaacacacaaatccgaagctgaagcagaaaatgaacatccattcacaaagaacaaaaccctatcccctaaactc 9407433  T
Q  119 gtcaatttcac 129  Q
     |||| |||||    
T  9407434 atcaacttcac 9407444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 15864868 - 15864952
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatatt 287  Q
    |||||||| ||| |||||| |||||||||| ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  15864868 agtgtaatcataggtgtcg-tgtcggacaccgacacgtgtctgacacggg-acacgcctaatccaaagagtgtccgtgcttcatatt 15864952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 18426969 - 18427067
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| ||| | |||||||||||| ||||||||||||| |||||||||||| | ||| ||||||| ||| |||  ||||||||||||| ||||||    
T  18426969 aaaatcacataattcggtgtaattatatatgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcata 18427067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 285
Target Start/End: Original strand, 27505236 - 27505369
Alignment:
Q  157 cggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggg 250  Q
    |||||| || ||||||||||| | |||||| ||||||||| |||  |||||||||| | ||||||||||||     ||||||||||||||| ||||| ||    
T  27505236 cggacaagccgacacagctaataattttta-aaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacacgacacgtgtccgacaccgg 27505334  T
Q  251 gacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| |||| |||| ||||||||||||||||||||    
T  27505335 gacatgcctaatccgaggagtgtccgtgcttcata 27505369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 41961650 - 41961580
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| |||| || |||||||||||||||||    
T  41961650 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcata 41961580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 4987291 - 4987222
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||| |||| |||||||||||| ||||||    
T  4987291 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 41980849 - 41980926
Alignment:
Q  46 aacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaa 123  Q
    ||||||||| |  |||||||| ||| |||||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  41980849 aacagacaaatttgaagcagaagcaaaaaacgaacatccattccccaagaacaaaactctatcccctaaactcgtcaa 41980926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 3631708 - 3631796
Alignment:
Q  191 tcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 279  Q
    ||||| ||| ||||||||||||||||| | |||||||||||||||| |||| |||||  ||||||||||  ||| ||||||||||||||    
T  3631708 tcacataattcagtgtaattatatgtgccagtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 9617611 - 9617519
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 111  Q
    |||||||||||||| ||||||||| | |||| |||| || |||||||| |||||||| |||||||||||| | |  |||||||||||||||||    
T  9617611 aataaagatgacacaattccctttggaaacacacaaatctgaagcagaagcagaaaatgaacatccattcacaaggaacaaaaccctatcccc 9617519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 273
Target Start/End: Original strand, 7171537 - 7171607
Alignment:
Q  203 gtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 273  Q
    ||||||||| | |||| |||||||||||||||||||||| ||||| | ||||||||| |||||||||||||    
T  7171537 gtgtaattacaagtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgt 7171607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 9336541 - 9336611
Alignment:
Q  52 caactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtca 122  Q
    |||||| |||||||| |||||||||||||||||||||||||| ||||||||| |||| || ||| ||||||    
T  9336541 caactcggaagcagaagcagaaaacgaacatccattccccaagaacaaaaccttatctcctaaattcgtca 9336611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 16000008 - 15999950
Alignment:
Q  228 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 286  Q
    |||||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcatat 15999950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 25064966 - 25065036
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| |||||||||||||||||||||||||||| ||||||||  |||||| |||||||| |||||| ||||    
T  25064966 gtgttggtgtcggacacgacacgtgtctgacaccgggacacggtttatccgaggagtgttcgtgctccata 25065036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 25093520 - 25093582
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||||    
T  25093520 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacac 25093582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 9425542 - 9425651
Alignment:
Q  20 ataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcg 119  Q
    ||||||||||||| ||||||||| | |||| |||| || ||||| || |||||||| |||||||||||| | || ||||||||||||| ||  ||||||     
T  9425542 ataaagatgacacaattccctttggcaacacacaaatccgaagctgaagcagaaaatgaacatccattcacaaagaacaaaaccctattccttaaactca 9425641  T
Q  120 tcaatttcac 129  Q
    |||| |||||    
T  9425642 tcaacttcac 9425651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 11251996 - 11252094
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||  ||||||||||| ||||| ||||||||| | ||  || |||||||| |||| ||||||||| |||||||||    
T  11251996 agaaaatcacataattcagtgtaattat--gtgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcat 11252093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 133 - 287
Target Start/End: Complemental strand, 24633498 - 24633341
Alignment:
Q  133 aagcactgatacggacacggacacc----ggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgga 228  Q
    |||||| |||||||||||||||||     |||||| ||||||||| |||   |||   ||||||||  ||| || ||||||||||||||||||||| |||    
T  24633498 aagcacggatacggacacggacacgacatggacactctgacacagttaataatttggaaaaatcacgtaattcaatgtaattatatgtgtcggtgttgga 24633399  T
Q  229 cacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatatt 287  Q
    |||||||| ||||| |||| || |||||||| || | | ||||| ||||||||||||||    
T  24633398 cacgacacttgtctaacaccggtacacgcctaattcga-gagtgcccgtgcttcatatt 24633341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 4466641 - 4466541
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| | ||| |||||||  |||||||| |||||||||| || | | ||||| ||||| |||||||| ||||| | |||||||||||||||||||    
T  4466641 agaaaatcatataattcagtgtagctatatgtgccggtgtcggatacaagatgtgtccgacactgggacacggcttattcgaggagtgtccgtgcttcat 4466542  T
Q  285 a 285  Q
    |    
T  4466541 a 4466541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 24205082 - 24204983
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||| ||| ||| ||||||||||||| |||||| |||||||||| ||| |||||| |||||  |||||||||| || | ||||||||||||||||||    
T  24205082 agaaaatgacataatacagtgtaattataagtgtcg-tgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttca 24204984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 284
Target Start/End: Original strand, 25775531 - 25775624
Alignment:
Q  189 aatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||| ||| ||||||||||| | ||||||||||||||||||   |||||| |||||  |||||||||| |||| |||||||| ||||||||||    
T  25775531 aatcacataattcagtgtaattacaagtgtcggtgtcggacacg--tcgtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 29508464 - 29508567
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcg------gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgct 280  Q
    ||||||| | ||| ||||||||||||||||||||      ||||||||||||||||  ||| ||||| |||||||| || ||||||| ||||||||||||    
T  29508464 aaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcggacacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgct 29508563  T
Q  281 tcat 284  Q
    ||||    
T  29508564 tcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 285
Target Start/End: Original strand, 8842348 - 8842447
Alignment:
Q  186 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||| |||   |||||||||||| |||||||||| |||||||||| |||  || |  | ||||||||| |||| ||||||||||||||||||||    
T  8842348 gaaaatcacataatttggtgtaattatatatgtcggtgtcagacacgacacatgttagatattgagacacgcctaatccgaggagtgtccgtgcttcata 8842447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 9655490 - 9655395
Alignment:
Q  34 attccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 129  Q
    ||||||||| | |||| |||| || ||||| || ||||||||||||||||| |  ||||||||||||||||||||||| ||| || |||| |||||    
T  9655490 attccctttggaaacacacaaatccgaagctgatgcagaaaacgaacatccttcgcccaaaaacaaaaccctatcccctaaattcatcaacttcac 9655395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 9695759 - 9695672
Alignment:
Q  24 agatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 111  Q
    ||||||||| |||||| || | |||| ||||||| |||||||| ||||| ||||||||  | | ||||||||||||||||||||||||    
T  9695759 agatgacacaattcccatttgcaacacacaactctgaagcagatgcagagaacgaacagtcttcccccaaaaacaaaaccctatcccc 9695672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 26492284 - 26492146
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    ||||||||||| | |||||| |||| ||||||   ||| | ||||||| | ||| ||||||||||| | || ||||||||||||||||||| ||||||||    
T  26492284 gacacggacactg-acacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcggacacgacacatgtctgac 26492186  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||   |||||| || |||| |||| |||||| ||||||||    
T  26492185 accaagacacgtctaatccgaggaatgtccgcgcttcata 26492146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 34185116 - 34185053
Alignment:
Q  222 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| |||| ||||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  34185116 tgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 34185053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 9343823 - 9343905
Alignment:
Q  29 acacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 111  Q
    |||| ||| ||| ||| |||| |||| || |||||||| ||||||||||||||| |||||||||| |||||||| ||||||||    
T  9343823 acacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccc 9343905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 14209172 - 14209242
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||||||  ||||  |||| || ||| ||||||| |||||||||||||||||    
T  14209172 gtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcata 14209242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 7928470 - 7928515
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  7928470 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 7928515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 9329837 - 9329893
Alignment:
Q  52 caactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatc 108  Q
    |||||| |||||||| |||||||||||| ||||||||||||| ||||||||| ||||    
T  9329837 caactcggaagcagaagcagaaaacgaatatccattccccaagaacaaaaccttatc 9329893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 13414469 - 13414533
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    |||||| | |||| ||||||||||||| | ||| || ||||||||||||||||||||||||||||    
T  13414469 gacacaaccaaatgttttagaaaatcaaataattcaatgtaattatatgtgtcggtgtcggacac 13414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 14216957 - 14217021
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||  ||||| ||||||| ||| |||| || |||||||||||||||||    
T  14216957 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 14223086 - 14223150
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||  ||||| ||||||| ||| |||| || |||||||||||||||||    
T  14223086 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 37077418 - 37077490
Alignment:
Q  216 tgtcggtgtcggacacg-acacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatatt 287  Q
    ||||||||||| ||||| || | |||| ||||||||||||| ||| ||||||||| |||||||||||||||||    
T  37077418 tgtcggtgtcgtacacggacgcatgtccgacacggggacacacctaatccaaggaatgtccgtgcttcatatt 37077490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 51206414 - 51206294
Alignment:
Q  165 ctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatcc 264  Q
    |||||||||||||   ||| | ||||||||| ||| |||||||| || | |||||||||||||||||    || ||| ||||| |||| ||  || ||||    
T  51206414 ctgacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcggacacatgtcgcgtccgacaccgggatacctctaatcc 51206315  T
Q  265 aaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||||    
T  51206314 aaggagtgtccgtgcttcata 51206294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 9646497 - 9646402
Alignment:
Q  34 attccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 129  Q
    ||||||||| | |||| |||| || ||||| || ||||||||||||||||| |  || |||||||||||||||||||| ||| || |||| |||||    
T  9646497 attccctttggaaacacacaaatccgaagctgatgcagaaaacgaacatccttcgccaaaaaacaaaaccctatcccctaaattcatcaacttcac 9646402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 9397753 - 9397863
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    |||||||| ||||| ||||||||| | |||| |||| ||  |||| || || ||||| |||||||||||| | || ||||| ||||||||||| ||||||    
T  9397753 aataaagacgacacaattccctttggcaacacacaaatccaaagctgaagcggaaaatgaacatccattcacaaagaacaagaccctatcccctaaactc 9397852  T
Q  119 gtcaatttcac 129  Q
     |||| |||||    
T  9397853 atcaacttcac 9397863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 15796294 - 15796224
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| |||||||||||| |||||||||  |||| || |||||||| |||||| |||||| |||||||||||    
T  15796294 gtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcata 15796224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 45451571 - 45451633
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||||| | | |||| |||| |||||||||||||||||||||||||| |||| |||||    
T  45451571 agaaaatcacatacttcagtataataatatgtgtcggtgtcggacacgacacatgtccgacac 45451633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 49505245 - 49505148
Alignment:
Q  134 agcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||| |||| ||| |||||||||| |||||| || || |||||   ||| ||||||||||| |||  |||||||||||||||||| ||||||||||||    
T  49505245 agcacggatatggaaacggacaccg-acacgcagagaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggacacg 49505148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 8383249 - 8383322
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||| ||||| |||||   ||| ||||||||| | ||| ||||||||||||| ||||||||||||||||||    
T  8383249 gacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 6780444 - 6780404
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 241  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  6780444 cagtgtaattatatgtgttggtgtcggacacaacacgtgtc 6780404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 9352913 - 9352961
Alignment:
Q  63 cagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 111  Q
    |||| |||||||||||||||||| |||||| ||||||||||||| ||||    
T  9352913 cagaagcagaaaacgaacatccactccccacaaacaaaaccctaccccc 9352961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 9377054 - 9377146
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 111  Q
    |||||||||||||| ||| ||||| | || | |||  ||  ||||||| |||| ||||||||||||| |||||| |||||||| |||||||||    
T  9377054 aataaagatgacacaatttcctttgggaagacacagatcccaagcagaagcaggaaacgaacatccactccccacaaacaaaatcctatcccc 9377146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 9448322 - 9448374
Alignment:
Q  59 gaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 111  Q
    |||||||| ||||||||||||||  |||||||||| |||||||| ||||||||    
T  9448322 gaagcagaagcagaaaacgaacagtcattccccaagaacaaaacactatcccc 9448374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 10690257 - 10690193
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||| |||| |||  ||||||||||    
T  10690257 gtgtcggacacaacacgtgtctgacacggcgacacacctaatccgaggaatgtatgtgcttcata 10690193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 11665964 - 11666070
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 275  Q
    ||||||||| |||  |||||||||||||||||||||||||           |||||||||||||||||| |  || |||||||| || ||||||||||||    
T  11665964 aaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgatatcggaacacgcctaattcaaggagtgtcc 11666063  T
Q  276 gtgcttc 282  Q
    |||||||    
T  11666064 gtgcttc 11666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 14832158 - 14832202
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgcct 259  Q
    |||||||| |||||||||||||||||| ||||| |||||||||||    
T  14832158 gtgtcggtatcggacacgacacgtgtccgacaccgggacacgcct 14832202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 20389636 - 20389694
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||| ||| ||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  20389636 aaaatcacataattcagtgtaat-atatgcgtcggtgtcggacac-acacgtgtctgacac 20389694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 32804581 - 32804484
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| |||  ||||||||||||||||||    ||||||||||||| |||| | ||| |  | |||||| |||  |||||||||||||||||||    
T  32804581 agaaaatcacataatttagtgtaattatatgtgtc----tcggacacgacacatgtccgccactgaaaaacgcctaatctgaggagtgtccgtgcttcat 32804486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 55213020 - 55213091
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||| ||| ||||||||| ||||| | ||||||| | ||||||| ||| |||||||| ||||    
T  55213020 tgtgtcggtgtcgggcacaacacgtgtccgacaccgagacacgcataatccaagaagtatccgtgctacata 55213091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 750732 - 750698
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  750732 atgaagcacggatacggacacggacaccggacacg 750698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 4990955 - 4990913
Alignment:
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| |||||||||| |||| ||||||||||||||||||||    
T  4990955 gacacgtggacacgcctaatccgaggagtgtccgtgcttcata 4990913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 9416541 - 9416651
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    ||||||||  |||| |||||||||||||||| |||  ||  | || || |||||||| ||||||  |||| | || ||||| ||||||||||| ||||||    
T  9416541 aataaagacaacacaattccctttagtaacacacatatccaaggctgaagcagaaaatgaacatttattcacgaagaacaacaccctatcccctaaactc 9416640  T
Q  119 gtcaatttcac 129  Q
    ||||| |||||    
T  9416641 gtcaacttcac 9416651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 11507515 - 11507469
Alignment:
Q  186 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    |||||||||| ||| |||||||||||||||| ||||| |||||||||    
T  11507515 gaaaatcacataattcagtgtaattatatgtttcggtatcggacacg 11507469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 38731232 - 38731278
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgg 227  Q
    ||||| ||||||||| ||| ||||||| |||||||||||||||||||    
T  38731232 ttttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcgg 38731278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 40052380 - 40052430
Alignment:
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||| ||||| ||||||||||| |||| |||||||| |||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcata 40052430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 7614456 - 7614396
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgaca 246  Q
    ||||||||||| ||| |||| ||||||||| ||||||||||| ||||| |||| ||||||||    
T  7614456 agaaaatcacataattcagtataattatatatgtcggtgtcgaacacggcacg-gtctgaca 7614396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 17568783 - 17568750
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacac 163  Q
    ||||||||| ||||||||||||||||||||||||    
T  17568783 atgaagcacggatacggacacggacaccggacac 17568750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 1389908 - 1389956
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| |||||  ||||| |||| |||||||||||||||||||||||||    
T  1389908 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 1389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 9402347 - 9402403
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaa 75  Q
    ||||||||||| || ||||||||||| |||| |||| || || ||||||||||||||    
T  9402347 aataaagatgatacaattccctttaggaacacacaaatctgaggcagaggcagaaaa 9402403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 9420586 - 9420642
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaa 75  Q
    ||||||||||| || ||||||||||| |||| |||| || || ||||||||||||||    
T  9420586 aataaagatgatacaattccctttaggaacacacaaatctgaggcagaggcagaaaa 9420642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 25074841 - 25074913
Alignment:
Q  214 tgtgtcggtgtcggacacga-cacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||| ||||| | | |||||| ||||| ||||||| ||| |||| |||||||| |||||||||||    
T  25074841 tgtgtcggtgtctgacaccaacgcgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcata 25074913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 26508102 - 26508166
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtg 223  Q
    |||||||||||||||||||   ||| | ||||||||| ||| ||||||||||| | |||||||||    
T  26508102 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 27903684 - 27903756
Alignment:
Q  214 tgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||| || ||| |||||||||||| ||  || |||| |||| || |||||||||||||||||    
T  27903684 tgtgtcggtgtcggataccgacgcgtgtctgacactggatcatgcctaatccgagaagtgtccgtgcttcata 27903756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 34910392 - 34910436
Alignment:
Q  242 tgacacggggacacgccttatccaaggagtgtccgtgcttcatat 286  Q
    |||||| |||||||| || |||| |||||||||||||||||||||    
T  34910392 tgacaccgggacacgtctaatccgaggagtgtccgtgcttcatat 34910436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 49651777 - 49651717
Alignment:
Q  225 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||| | || ||||| ||||||| ||| |||| || |||||||||||||||||    
T  49651777 cggacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcata 49651717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 9e-52; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 143 - 285
Target Start/End: Original strand, 24009274 - 24009413
Alignment:
Q  143 acggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtct 242  Q
    ||||| ||||||||  ||||||  ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  24009274 acggatacggacac--gacacggcgacacagctaatttttttagaaaatcacaaaatgcagtgtaaat-tatgtgtcggtgtcggacacgacacgtgtct 24009370  T
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24009371 gacacggggacacgccttatccaaggagtgtccgtgcttcata 24009413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 20242794 - 20242668
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| |||||| |||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  20242794 gacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacacgaggacacgcc 20242695  T
Q  259 ttatccaaggagtgtccgtgcttcata 285  Q
    |||||| | ||||||| ||||||||||    
T  20242694 ttatccgaagagtgtctgtgcttcata 20242668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 157 - 285
Target Start/End: Complemental strand, 36096444 - 36096305
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt-----------gtcggacacgacacgtgtctgac 245  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||           |||||||||||||||||||||||    
T  36096444 cggacacgccgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgtctgac 36096345  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  36096344 acggggacacgccttaaccaaagagtgtccgtgcttcata 36096305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 20694449 - 20694345
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    |||||||||||||| ||||||||| | |||| |||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  20694449 aataaagatgacacaattccctttggcaacacacaaatccgaagcagaagcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactt 20694350  T
Q  119 gtcaa 123  Q
    |||||    
T  20694349 gtcaa 20694345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 162 - 284
Target Start/End: Complemental strand, 2438783 - 2438661
Alignment:
Q  162 acgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctta 261  Q
    ||||||||||||||||   ||| | ||||||||| ||| ||||||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| |    
T  2438783 acgctgacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaa 2438684  T
Q  262 tccaaggagtgtccgtgcttcat 284  Q
    ||| |||||||||||||||||||    
T  2438683 tccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 285
Target Start/End: Original strand, 41843405 - 41843564
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt----- 224  Q
    ||||||||| |||| | |||||||||| | |||||| |||| | ||||||||||||| |||||||| ||| | || |||||||||||||||||||         
T  41843405 atgaagcacggatatgaacacggacactg-acacgccgacaaaactaaattttttaggaaatcacataattcggtataattatatgtgtcggtgttgtgt 41843503  T
Q  225 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||    
T  41843504 cggacgcgacacgtgtccgacacggggacacgctttatccgaggagtgtctgtgcttcata 41843564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 130 - 285
Target Start/End: Original strand, 37558941 - 37559095
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgga 228  Q
    ||||||||| ||||||||||||||||| | |||||| ||||||||||| | ||| || ||||||||| ||| || |||||||| | ||||||||||||||    
T  37558941 atgaagcacggatacggacacggacactg-acacgccgacacagctaataatttgta-aaaatcacataattcaatgtaattacaagtgtcggtgtcgga 37559038  T
Q  229 cacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |  |||||||||| ||||| || |||||| | |||| ||||||||||||||||||||    
T  37559039 cttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcata 37559095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 28596503 - 28596587
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||  |||||| ||| |||| ||||||||||||||||||||    
T  28596503 cagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 34785061 - 34784912
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgac 234  Q
    ||||||||||| | |||| | |||||| |||| ||||||||||||||||| |||  |||||||||||||||||||||||||           ||||||||    
T  34785061 gacacggacactg-acacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgac 34784963  T
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    || ||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  34784962 acctgtctgacacggggacacgccttattcgaggagtgtctgtgcttcata 34784912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 285
Target Start/End: Complemental strand, 38117260 - 38117100
Alignment:
Q  130 atgaagcactgatacggacac-ggacac----cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 224  Q
    ||||||||| ||||||||||| ||||||    | ||||||| |||||||||||   ||| | ||||||||| | | | ||||||||| | |||| |||||    
T  38117260 atgaagcacggatacggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgt 38117161  T
Q  225 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||| ||||||||| ||||| ||||||||||| |||| ||| ||||||||||||||||    
T  38117160 cggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcata 38117100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 18841080 - 18840954
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    |||||||||||||| ||||   ||| | ||||| ||| |||  |||||||||| | ||||||||||| |||||||||| |||| ||||| ||||||| ||    
T  18841080 gacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccgggacacacc 18840981  T
Q  259 ttatccaaggagtgtccgtgcttcata 285  Q
    | |||| ||||||||||||||||||||    
T  18840980 taatccgaggagtgtccgtgcttcata 18840954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 26769571 - 26769640
Alignment:
Q  216 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||| |||||||||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  26769571 tgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcata 26769640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 34994004 - 34993923
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||| |||||| |||||||| ||||| ||||| ||||||||||| || |||||||||| |||||||||||    
T  34994004 tgtaattatatgtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcata 34993923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 5040754 - 5040845
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||| ||| || |||||||| | ||||||||||||||||||||| ||||| ||| | |||||||||||  |||||||||||||||||    
T  5040754 aaaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctagtccaaggagtgtccgtg 5040845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 5367213 - 5367292
Alignment:
Q  188 aaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaag 267  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| | || ||| | ||||||||||| |||||||    
T  5367213 aaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatatccgactccgggacacgcctaatccaag 5367292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 273
Target Start/End: Original strand, 12224243 - 12224329
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 273  Q
    |||||| || ||| || |||||||| | ||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||    
T  12224243 aaaatcccataatccaatgtaattacaagtgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgt 12224329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 15972893 - 15972991
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||| ||| ||||||||||| | ||||||||||||||||||||||||||| ||| | ||||||| ||| |||| | || |||||||||||||||    
T  15972893 aaaattacacaattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcata 15972991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 30717530 - 30717460
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| |||||||||||||||||||  ||||| |||| |||||| |||||||||||||||||||||||||    
T  30717530 gtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcata 30717460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 35056927 - 35056997
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||||||| |||||||  |||||||| |||  ||||||||||||||||||||    
T  35056927 gtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcata 35056997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 37419802 - 37419872
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||  |||||| ||||| ||||||||||| |||| ||||||||||||||||||||    
T  37419802 gtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 37419872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 185 - 282
Target Start/End: Complemental strand, 37411285 - 37411188
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 282  Q
    ||||||||||| ||| |||||| ||||||||||||| ||||| ||||||| |||||| ||||| |||||||||||  ||| ||||||| | |||||||    
T  37411285 agaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacacgacgcgtgtccgacactgggacacgcctagtccgaggagtgcctgtgcttc 37411188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 19942314 - 19942382
Alignment:
Q  216 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| |||| |||||||||| ||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 285
Target Start/End: Complemental strand, 18054772 - 18054717
Alignment:
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  18054772 acgacacgtgtctgacacggaaacacgccttatccaaggaatgtccgtgcttcata 18054717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 220 - 285
Target Start/End: Complemental strand, 11223858 - 11223794
Alignment:
Q  220 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||| |||||||||| ||||||||||| |||  ||||||||||||||||||||    
T  11223858 ggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 11223794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 18054883 - 18054803
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaatttttt-agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||| |||||||| |||||  ||||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  18054883 gacagggacaccg-acacgtcgacacagctaattttttttagaaaatcacaaactgcagtgtaattatatgtgttggtgtcg 18054803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 42511387 - 42511323
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| ||||||||| ||||| |||||||| || |||| ||||||||||||||||||||    
T  42511387 gtgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcata 42511323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 32749825 - 32749755
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| ||||||||  |||| ||||| ||||| ||||||||||||||| |||||||||||| ||||||||    
T  32749825 gtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtccgcgcttcata 32749755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 20922975 - 20922922
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||||||||||| |||  |||||||||||||||||| ||||||||||||    
T  20922975 ttttttagaaaatcacataatttagtgtaattatatgtgtctgtgtcggacacg 20922922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 159 - 279
Target Start/End: Original strand, 21624258 - 21624374
Alignment:
Q  159 gacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgc 257  Q
    ||||||| ||||||||||| | |||| | |||||  || ||| ||||||||||| | ||||||||||||||||||     |||| ||||  ||||||| |    
T  21624258 gacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtcggacacg-----tgtccgacagcgggacacac 21624352  T
Q  258 cttatccaaggagtgtccgtgc 279  Q
    || |||||||||||||||||||    
T  21624353 ctaatccaaggagtgtccgtgc 21624374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 27084318 - 27084387
Alignment:
Q  216 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||||||  |||| | ||||||||| |||  |||||||||  |||||||||    
T  27084318 tgtcggtgtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcata 27084387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 34007016 - 34006931
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacg-acacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| ||| |||||||||| ||||||  |  |||||||||||| || |||| ||| || ||||||||||||||||||||||    
T  34007016 cagtgtaatcataggtgtcggtgtgggacacctattcgtgtctgacaccggaacacacctaattcaaggagtgtccgtgcttcata 34006931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 34691844 - 34691799
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||||    
T  34691844 aaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34691799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 34714256 - 34714211
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||||    
T  34714256 aaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34714211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 18255980 - 18255944
Alignment:
Q  250 ggacacgccttatccaaggagtgtccgtgcttcatat 286  Q
    |||||||||| ||||||||||||||||||||||||||    
T  18255980 ggacacgcctaatccaaggagtgtccgtgcttcatat 18255944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 21616742 - 21616813
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgt 218  Q
    ||||||||||| |||||||| ||||| |||||   ||| ||||||||||| ||| ||||||||||||||||||    
T  21616742 gacacggacac-ggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 23354652 - 23354581
Alignment:
Q  215 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 286  Q
    ||||||| ||||||||| |||  |||||||||||||| |||||||| |||| ||||||||||||| |||||||    
T  23354652 gtgtcggggtcggacaccgaccggtgtctgacacggg-acacgcctaatccgaggagtgtccgtggttcatat 23354581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 30404889 - 30404829
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||| ||| ||||||||||| | ||||||| |||||||||||||| |||| |||||    
T  30404889 aaaatcacataattcagtgtaattacaagtgtcggcgtcggacacgacacatgtccgacac 30404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 43586063 - 43585971
Alignment:
Q  168 acacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctt 260  Q
    |||||| |||| |||| ||||||| ||| ||| || |||||| | | ||||||||||||||||||| ||||||| |||||  |||||| ||||    
T  43586063 acacagataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcagacacatggacacacctt 43585971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 15909699 - 15909632
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||| || ||||||||| |||| ||||||| ||| ||| ||||||||||||||||| | ||||||    
T  15909699 gacacgccgatacagctaaaattttgagaaaattacataattcagtgtaattatatgtgacagtgtcg 15909632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 22084830 - 22084757
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctga---cacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||||||||| ||||||||||||   ||| ||||||||||| |||| | ||||||| ||||||||||    
T  22084830 gtgtcagtgtcggacacaacacgtgtctgacaccaccgggacacgcctaatccgatgagtgtctgtgcttcata 22084757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 31808097 - 31808176
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    ||||||||| ||| ||||||||||||||||||| |||| | ||||||||| |||  |||||  |||||| ||| ||||||    
T  31808097 aaaatcacataattcagtgtaattatatgtgtcagtgttgaacacgacacatgttcgacacctggacacacctaatccaa 31808176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 11223930 - 11223864
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 225  Q
    |||||||||||||||||||  |||| | ||||| ||| ||| ||||||||||| | |||||||||||    
T  11223930 gacacgctgacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 15657930 - 15657992
Alignment:
Q  222 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    |||||||| ||||||||||| ||| | |||||||||||  ||| |||||||||| ||||||||    
T  15657930 tgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 21374807 - 21374773
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  21374807 atgaagcacggatacggacacggacaccggacacg 21374773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 23354995 - 23354926
Alignment:
Q  215 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||| || |||||| ||| ||||||||||||||| |||||||| |||| |||||||||| ||||||||    
T  23354995 gtgtcggggttggacaccgacccgtgtctgacacggg-acacgcctaatccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 26769463 - 26769497
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  26769463 atgaagcacggatacggacacggacaccggacacg 26769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 29176528 - 29176446
Alignment:
Q  191 tcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 273  Q
    ||||| ||| ||||||||||||| |||| ||||| ||||||| ||| |||| ||||| | ||||| ||| ||||||| |||||    
T  29176528 tcacataattcagtgtaattataagtgttggtgttggacacggcacatgtccgacactgagacacacctaatccaagaagtgt 29176446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 44860379 - 44860449
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| ||||| |||||||||| ||||| ||||  ||||||| ||| || | ||||||||||||||||||||    
T  44860379 gtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 19536436 - 19536391
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  19536436 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 19536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 31284041 - 31284118
Alignment:
Q  160 acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattat-atgtgtcggtgtcggacacgacac 236  Q
    |||||| ||||| |||||   ||| ||||||||||| ||| || ||||||||| |||||||||||| |||||||||||    
T  31284041 acacgccgacactgctaataatttgagaaaatcacataatccattgtaattattatgtgtcggtgttggacacgacac 31284118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 44860338 - 44860379
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||||||| || ||| ||||||||||||||||||||||||||    
T  44860338 agaaaatcgcataattcagtgtaattatatgtgtcggtgtcg 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 282
Target Start/End: Original strand, 6940235 - 6940370
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    ||||||||||| | |||||| |||||||||||   ||||| ||| | ||| |||  |||||||||| | |||||||| || |||||||||||||||  ||    
T  6940235 gacacggacactg-acacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggtatccgacacgacacgtgtccaac 6940333  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttc 282  Q
    ||   ||||| ||| ||| || || ||||||||||||    
T  6940334 accaagacacacctaatcaaatgattgtccgtgcttc 6940370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 10535734 - 10535686
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||  |||||||||| |||| |||||||| |||||||||||    
T  10535734 gtgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttcata 10535686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 14996222 - 14996171
Alignment:
Q  222 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    |||||||||| ||||||||||||||| || |||||||| |||| |||||||||    
T  14996222 tgtcggacac-acacgtgtctgacaccggaacacgcctaatccgaggagtgtc 14996171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 18889632 - 18889592
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 225  Q
    ||||||||||| ||| ||||||||| |||||||||||||||    
T  18889632 agaaaatcacataattcagtgtaatcatatgtgtcggtgtc 18889592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 27447114 - 27447082
Alignment:
Q  130 atgaagcactgatacggacacggacaccggaca 162  Q
    ||||||||| |||||||||||||||||||||||    
T  27447114 atgaagcacggatacggacacggacaccggaca 27447082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 28524419 - 28524479
Alignment:
Q  160 acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcg 220  Q
    |||||| || ||||||||| ||||  | |||||||| ||| ||||||||||||||||||||    
T  28524419 acacgccgatacagctaaaattttgtgcaaatcacataattcagtgtaattatatgtgtcg 28524479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 31283994 - 31284026
Alignment:
Q  130 atgaagcactgatacggacacggacaccggaca 162  Q
    ||||||||| |||||||||||||||||||||||    
T  31283994 atgaagcacagatacggacacggacaccggaca 31284026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 38355928 - 38355888
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 225  Q
    ||||||||||| ||| |||||| ||||||||||||||||||    
T  38355928 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 38355888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 40361778 - 40361738
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacacgacacgtgtct 242  Q
    ||||||||||||| ||| |||||| ||||||||||||||||    
T  40361778 agtgtaattatatctgttggtgtcagacacgacacgtgtct 40361738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 6e-50; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 43737892 - 43737752
Alignment:
Q  146 gacacggacaccgg-acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctga 244  Q
    |||||||||||||  |||||| | |||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  43737892 gacacggacaccgacacacgccggcacagctaaattttcttgaaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacaggtgtctga 43737793  T
Q  245 cacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  43737792 cacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 3951596 - 3951477
Alignment:
Q  167 gacacagctaaattttttagaaaa-tcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatcca 265  Q
    ||||||||||||||||| | |||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  3951596 gacacagctaaatttttaaaaaaaatcacaaaatgcagtgtacttatatgtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatcca 3951497  T
Q  266 aggagtgtccgtgcttcata 285  Q
    |||||| |||||||||||||    
T  3951496 aggagtttccgtgcttcata 3951477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 34451116 - 34450962
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg----------------gac 229  Q
    ||||||| ||||| |||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||                |||    
T  34451116 gacacgggcaccg-acacactgacacagctaattttttttgaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcgtgtcggtgtcggac 34451018  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34451017 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 34450962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 185 - 284
Target Start/End: Original strand, 3025569 - 3025668
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||||||||| | |||||| || |||| |||||||||||||||||||    
T  3025569 agaaaatcacataattcagtgtaattataggtgtcagtgtcggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 130 - 285
Target Start/End: Complemental strand, 36450849 - 36450695
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| ||||||||||||||||| | |||||| |||||| ||||   ||| | ||||||||| ||| ||||||||||| | |||| ||||||||||    
T  36450849 atgaagcacggatacggacacggacactg-acacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggac 36450751  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| |||||| |||||  |||||||||| |||| ||||||||| ||||||||||    
T  36450750 acgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcata 36450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 33405425 - 33405325
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    |||||| |||| |||  ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| || |||||| ||||||||||||| |||    
T  33405425 agaaaaacacataatttagtgtaattatatgtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgctccat 33405326  T
Q  285 a 285  Q
    |    
T  33405325 a 33405325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 926813 - 926730
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||| |||||| || |||||| |||||||||||||||||||    
T  926813 cagtgtaattataagtgtcggtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 26902217 - 26902105
Alignment:
Q  184 tagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgacacgtgtctgacacggggacacgccttatccaaggagtg 272  Q
    |||||||||||| ||| ||||||||||||||||||||||||||           ||||||||||||||||| |||||||||||||||||||  |||||||    
T  26902217 tagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtg 26902118  T
Q  273 tccgtgcttcata 285  Q
    |||||||||||||    
T  26902117 tccgtgcttcata 26902105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 285
Target Start/End: Original strand, 14134663 - 14134817
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| ||||||||||| ||||| |||||||  ||||   ||||   ||| ||||||||||| ||| |||||||||||||| ||||||||||  ||    
T  14134663 atgaagcacggatacggacaccgacac-ggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtcaaac 14134761  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||| | |||  |||||||||| || | ||||||||||||| ||||||    
T  14134762 acgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcata 14134817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 20679436 - 20679337
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| | | ||||||||||||| ||||||||||| ||| | ||||||||| ||||| ||||||||||||| || |||||||||| ||||||||    
T  20679436 agaaaatcacatagttcagtgtaattataagtgtcggtgtcagacgcaacacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgcttcat 20679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 281
Target Start/End: Complemental strand, 31109613 - 31109463
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    |||||||||||||| |||||||||||| | |||||| ||||| | |||   ||| ||||||||| | ||| |||| ||| |||||||||| |||||||||    
T  31109613 atgaagcactgatatggacacggacactg-acacgccgacaccgttaataatttgagaaaatcaaacaattcagtctaactatatgtgtcagtgtcggac 31109515  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    | |   ||||| |||||| ||||||||||| |||| ||||||||||||||||    
T  31109514 atgtgtcgtgtatgacactgggacacgcctaatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 40332209 - 40332307
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||||| ||| ||||||||||| | |||||||||| ||||||||||||||||  |||| ||||| ||||| |||| ||||||||||||| ||||    
T  40332209 agaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttca 40332307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 29447109 - 29447040
Alignment:
Q  216 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||| |||||||||||  |||||||||| |||| ||||||||||||||||||||    
T  29447109 tgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 282
Target Start/End: Original strand, 5813569 - 5813707
Alignment:
Q  143 acggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtct 242  Q
    ||||| |||||||| |||||||| |||||||||||   ||| | ||| ||||| | |  ||||||| || | |||||||||||||||||||||||||||     
T  5813569 acggatacggacac-ggacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcggacacgacacgtgtcc 5813667  T
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttc 282  Q
    ||||| ||||||||||| ||   |||||||||||||||||    
T  5813668 gacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 22652035 - 22652105
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| || |||| ||||||||||||||||||||    
T  22652035 gtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 22652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 29510304 - 29510234
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||| |||||| ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  29510304 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 29510234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 4786379 - 4786279
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||  || |  | |||| | ||||| ||| |||||||||||||||||    
T  4786379 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggatacgacatgtgttcgataacgagacatggcttattcaaagagtgtccgtgcttcat 4786280  T
Q  285 a 285  Q
    |    
T  4786279 a 4786279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 37283851 - 37283756
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||  |||||||||| |||||||||||||||||   || |||||||| || |||| ||||||| |||||||||||    
T  37283851 agaaaatcacataattcagtgtaattat--gtgtcggtgtgggacacgacacgtgtct---accgggacacgtctaatccgaggagtgcccgtgcttcat 37283757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 126369 - 126295
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    |||||||||||||||| |||||||||||||||||||||  | || |||||||| || |||| |||||||||||||    
T  126369 tgtaattatatgtgtcagtgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagtgtccgtg 126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 18407739 - 18407837
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| ||| ||||||||||| | |||||| || |||||||||||| |||| |||||  |||||||||| ||   ||||||||||||||||||||    
T  18407739 aaaatcacataattcagtgtaattacaagtgtcgctgccggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcata 18407837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 31557016 - 31557114
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| ||| ||||||||||| | || |||||||| |||||||||| |||| |||||  |||||||||| |||||||| |||||| ||| |||||    
T  31557016 aaaatcacataattcagtgtaattacaagtttcggtgtcagacacgacacatgtccgacaccaggacacgcctaatccaaggtgtgtccatgcctcata 31557114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 18964184 - 18964308
Alignment:
Q  174 ctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt-------cgg------acacgacacgtgtctgacacggggacacgcctt 260  Q
    |||| ||||||||||||||||| ||| || |||||||||||||||||||||       |||      ||||||||| ||||| |||||| ||||||||||    
T  18964184 ctaatttttttagaaaatcacataattcaatgtaattatatgtgtcggtgtgtcgtgtcggcgttgaacacgacacctgtctaacacggagacacgcctt 18964283  T
Q  261 atccaaggagtgtccgtgcttcata 285  Q
    |||| ||||||||| ||||||||||    
T  18964284 atccgaggagtgtctgtgcttcata 18964308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 13844665 - 13844591
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    ||||||||| ||||| |||||   ||| ||||||||||| |||  ||||||||||||||||||||||||||||||    
T  13844665 cggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 15816129 - 15816059
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| ||||||||||||||||||  || ||||| ||||||||||| |||| || |||||||||||||||||    
T  15816129 gtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 15816059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 8343381 - 8343445
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||||||||||||| ||||| ||||||||||| |||| | ||||||| ||||||||||    
T  8343381 gtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcata 8343445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 16641974 - 16641910
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||| |||||| |||| ||||||| ||| |||| ||||||||| ||||||||||    
T  16641974 gtgtcggacacgacatgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttcata 16641910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 24205820 - 24205748
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 286  Q
    ||||||||||||| |||| || | |||||||||| || |||||||| |||| ||||||||||||| |||||||    
T  24205820 tgtgtcggtgtcgaacacaacgcatgtctgacaccggaacacgcctaatccgaggagtgtccgtgtttcatat 24205748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 31236646 - 31236570
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacga 233  Q
    ||||||||| ||||| |||||   ||| ||||||||||| ||| || |||||||||||||||||||| |||||||||    
T  31236646 cggacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggacacga 31236570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 6065650 - 6065587
Alignment:
Q  222 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||| |||| ||||| || |||||| | || ||||||||||||||||||||||    
T  6065650 tgtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcata 6065587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 21465471 - 21465541
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| |||||||||||||||||||||  |||| |||| |||||| ||   ||||||||||||||||||||    
T  21465471 gtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcata 21465541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 28745557 - 28745627
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||||| |||| | ||| | |||| | || || ||||||||||||||||||||||    
T  28745557 gtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgcttcata 28745627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 29447503 - 29447573
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| ||||||||| ||||| ||||| |||||| | || |||  ||||||||||||||||||||    
T  29447503 gtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcata 29447573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 34897103 - 34897149
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  34897103 agaaaatcacataattcagtgtaattatatgtgtcgatgtcggacac 34897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 285
Target Start/End: Complemental strand, 24413605 - 24413500
Alignment:
Q  180 tttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 279  Q
    |||| ||||||  ||| ||| ||| ||||||||| ||||| |||||||||||||  ||||||  |||  |||||||| || |||| || |||||||||||    
T  24413605 ttttgagaaaaatacataattcagggtaattataagtgtcagtgtcggacacgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgc 24413506  T
Q  280 ttcata 285  Q
    ||||||    
T  24413505 ttcata 24413500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 273
Target Start/End: Original strand, 8293859 - 8293931
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 273  Q
    |||||||||||||||||||||||||  ||| ||||| | ||||||||  |||||| ||| |||| ||||||||    
T  8293859 cagtgtaattatatgtgtcggtgtcaaacatgacacatatctgacacctggacacacctaatccgaggagtgt 8293931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 22943349 - 22943301
Alignment:
Q  226 ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    |||||||||||||||| ||||| ||||||||||| |||| |||||||||    
T  22943349 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 39820464 - 39820546
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||| ||| |||||| |||||||||| ||| |||||| |||||||| |||||||| |||| || |||||||||||||||||    
T  39820464 agtgtaatcataggtgtcg-tgtcggacaccgacgcgtgtccgacacggg-acacgcctaatccgagaagtgtccgtgcttcata 39820546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 4673418 - 4673355
Alignment:
Q  222 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||| | | || ||||| || |||||||| |||||||||||||| ||||||||||    
T  4673418 tgtcggacacgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcata 4673355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 11803317 - 11803388
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||| ||| ||||||| |||| ||||| || ||||| || |||| ||||||||||||||||||||    
T  11803317 tgtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcata 11803388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 11927125 - 11927086
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  11927125 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 11927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 22595952 - 22596068
Alignment:
Q  130 atgaagcactgatacggacac-ggacac----cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 224  Q
    ||||||||| ||||||||||| ||||||    | ||||||| |||||||||||   ||| | ||||| ||| ||| ||||||||||| | |||| |||||    
T  22595952 atgaagcacggatacggacaccggacacaacactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgt 22596051  T
Q  225 cggacacgacacgtgtc 241  Q
    ||||| |||||||||||    
T  22596052 cggacgcgacacgtgtc 22596068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 38079017 - 38079088
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 256  Q
    |||||||||||  || ||||||||||||||| |||| ||||||||||||| | |||| ||||| ||| ||||    
T  38079017 agaaaatcacatgattcagtgtaattatatgcgtcgatgtcggacacgacgcatgtccgacaccgggccacg 38079088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 4948672 - 4948718
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacga 233  Q
    ||||||||| ||| ||||||||||| | |||||||||||||||||||    
T  4948672 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 4948718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 8847277 - 8847315
Alignment:
Q  188 aaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  8847277 aaatcacataattcagtgtaattatatgtgtcggtgtcg 8847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Complemental strand, 13436953 - 13436911
Alignment:
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||    
T  13436953 gacaccgggacacgcctaatccaaggagtgtctgtgcttcata 13436911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 20873089 - 20873143
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 241  Q
    ||||||||| |||  |||||||||| | ||||||||||||||||||| |||||||    
T  20873089 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgatacgtgtc 20873143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 26915246 - 26915200
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctta 261  Q
    ||||||||||||||||||| ||||||| ||||  |||||||||||||    
T  26915246 gtgtcggtgtcggacacgatacgtgtcagacattgggacacgcctta 26915200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 13009459 - 13009422
Alignment:
Q  249 gggacacgccttatccaaggagtgtccgtgcttcatat 286  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  13009459 gggacacgcctaatccaaggagcgtccgtgcttcatat 13009422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 9414912 - 9414860
Alignment:
Q  189 aatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 241  Q
    ||||||| ||| ||||| ||||||| |||| |||||| |||||||||||||||    
T  9414912 aatcacataattcagtgcaattataagtgttggtgtcagacacgacacgtgtc 9414860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 281
Target Start/End: Complemental strand, 22197736 - 22197676
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    |||||||||| |||||||||| ||||| ||  ||||||| |||  ||||||||||||||||    
T  22197736 gtgtcggacatgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctt 22197676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 28747482 - 28747430
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    ||||||||||||||| | |   || ||||||||||||||||||||||||||||    
T  28747482 ttttttagaaaatcagatagctcaatgtaattatatgtgtcggtgtcggacac 28747430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 44462215 - 44462151
Alignment:
Q  206 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggag 270  Q
    |||| ||||||||||||||| ||||||| || |||| ||||| |||||||| || |||| |||||    
T  44462215 taatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44462151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 44469748 - 44469684
Alignment:
Q  206 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggag 270  Q
    |||| ||||||||||||||| ||||||| || |||| ||||| |||||||| || |||| |||||    
T  44469748 taatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44469684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 8e-43; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 146 - 285
Target Start/End: Original strand, 6401478 - 6401627
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt-----------cggacacgac 234  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||           ||||||||||    
T  6401478 gacacggacaccg-acacgccgacacaactaaattttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgac 6401576  T
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6401577 acgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 30099105 - 30098982
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| |||||| |||||||||||| | |||| || ||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30099105 gacacgccgacacaactaaattttttaaacaatcgcataattctgtgtaattatatgtgtcggtgtcggatacgacacgtgtctgacacggggacacgcc 30099006  T
Q  259 ttatccaaggagtgtccgtgcttc 282  Q
    ||||||||||||||| ||||||||    
T  30099005 ttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 158 - 285
Target Start/End: Original strand, 21814252 - 21814390
Alignment:
Q  158 ggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatat-----------gtgtcggtgtcggacacgacacgtgtctgaca 246  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||| ||    
T  21814252 ggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggca 21814351  T
Q  247 cggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  21814352 cggggacacgccttatccaaggaatgttcgtgcttcata 21814390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 21576784 - 21576686
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| ||| ||||||||||| | |||||| |||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  21576784 aaaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcata 21576686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 182 - 285
Target Start/End: Original strand, 42029767 - 42029870
Alignment:
Q  182 tttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    |||||||||||||| ||| || ||||||||||||| ||||||||||||||||||| |||||| ||||  |||||||||||||| |||||||||||||| |    
T  42029767 tttagaaaatcacataattcaatgtaattatatgtatcggtgtcggacacgacacatgtctgtcacgtagacacgccttatccgaggagtgtccgtgcat 42029866  T
Q  282 cata 285  Q
    ||||    
T  42029867 cata 42029870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 30502429 - 30502330
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||| ||||||||| ||| ||||||||||    
T  30502429 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 30542772 - 30542673
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||| ||||||||| ||| ||||||||||    
T  30542772 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 146 - 284
Target Start/End: Complemental strand, 21191135 - 21190998
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    ||||||||||| | ||| || |||||||||||   ||| | ||||||||| ||| ||||||||||| | ||||||||||||||||| ||||||||| |||    
T  21191135 gacacggacactg-acatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgac 21191037  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
     | ||||||||||| |||| |||||||||||||||||||    
T  21191036 tccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 32426965 - 32426870
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 225  Q
    ||||||||  |||||||||||||||||||||| | | ||||| ||||||||||||||||||||||| ||| || ||||||||| ||||||||||||    
T  32426965 atgaagcatggatacggacacggacaccggacgcaccgacacggctaaattttttagaaaatcacataattcattgtaattatttgtgtcggtgtc 32426870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 43564901 - 43564999
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| |||  |||||||||||| ||||||||||||||||||||| ||||| ||| | ||||||||||| |||| || |||||||||||||||||    
T  43564901 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcata 43564999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 28588715 - 28588615
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||| | ||||||||  |||||||| | |||| | |||||||| ||||||||    
T  28588715 agaaaatcacataattcagtgtaattataggtgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcat 28588616  T
Q  285 a 285  Q
    |    
T  28588615 a 28588615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 19453125 - 19452998
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgacacgtgtctgacacggggacac 255  Q
    ||||||| |||||||||||||||||||||||||  |  ||||||||||||||||||||||           |||||||||| ||||| |||||| || ||    
T  19453125 gacacagttaaattttttagaaaatcacaaaatataccgtaattatatgtgtcggtgtcgtgtcaatgtcggacacgacacatgtctcacacggagatac 19453026  T
Q  256 gccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||||||||| ||||||||||||    
T  19453025 gccttatccaaggagcgtccgtgcttca 19452998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 39268613 - 39268541
Alignment:
Q  211 atatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    |||||||||||||| |||||||||| ||||| ||||| ||||||||||| |||| ||||||||||||||||||    
T  39268613 atatgtgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 39758272 - 39758327
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt 222  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  39758272 gacacagctaaattttttagaaaatcacataattcagtgtaattatatgtgtcggt 39758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 21522809 - 21522879
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||| |||||| |||||||||||| |||||    
T  21522809 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcata 21522879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 21533375 - 21533445
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||| |||||| |||||||||||| |||||    
T  21533375 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcata 21533445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 21542089 - 21542159
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||| ||||||||| |||||    
T  21542089 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 185 - 290
Target Start/End: Original strand, 17123066 - 17123170
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| |||  |||  |||||||| ||||||||| |||||||| || |||| |||||||| |||||||| |||| |||||||||||||||||||    
T  17123066 agaaaatcacataatcaagtacaattatatatgtcggtgttggacacgaaacatgtccgacacggg-acacgcctaatccgaggagtgtccgtgcttcat 17123164  T
Q  285 attttc 290  Q
    | ||||    
T  17123165 agtttc 17123170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 21194164 - 21194068
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    |||||||||||  || ||||||||||||| || | ||||| ||||||||||| |||| ||||| ||| ||||||| |||| ||||||||||||||||    
T  21194164 agaaaatcacatcattcagtgtaattataggtattggtgttggacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctt 21194068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 273
Target Start/End: Original strand, 26312803 - 26312875
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 273  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||  |||||| ||| |||| ||||||||    
T  26312803 cagtgtaattatatgtatcggtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagtgt 26312875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 285
Target Start/End: Original strand, 42893350 - 42893478
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 256  Q
    ||||||| | |||||||||||   ||| | ||||||||| ||| ||||||||||| | ||||||||||| ||||| ||||||||| |||||  |||||||    
T  42893350 cggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacacaacacgtgtccgacaccaggacacg 42893449  T
Q  257 ccttatccaaggagtgtccgtgcttcata 285  Q
    ||| ||   |||||||||| |||||||||    
T  42893450 cctaatatgaggagtgtccatgcttcata 42893478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 31084315 - 31084446
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcg-----gtgtcggacacgacacgtgtctgacacggggac 253  Q
    ||||||| |||||||||||   ||| | ||||||||| ||| || |||||||| | ||||||     ||||||||||||||||||||| ||||| |||||    
T  31084315 gacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacactgggac 31084414  T
Q  254 acgccttatccaaggagtgtccgtgcttcata 285  Q
    | |||| |||| ||||||||||||| ||||||    
T  31084415 atgcctaatccgaggagtgtccgtggttcata 31084446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 18421882 - 18421779
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggg----gacacgccttatccaaggagtgtccgtgct 280  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||| | ||| ||    |||||| || |||| ||||||||| |||||    
T  18421882 agaaaatcacataatccagtgtaattatatgtgtcggcgtcggacacgacacatgtccggcaccgggactgacacgtctaatccgaggagtgtctgtgct 18421783  T
Q  281 tcat 284  Q
    ||||    
T  18421782 tcat 18421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 39698600 - 39698670
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||| || || ||||| | ||||||||| |||| ||||||||||||||||||||    
T  39698600 gtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 39698670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 14873535 - 14873640
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc-----ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 279  Q
    |||||| |||| |||  ||||||||||||||||||||||||     |||| | |||||||||  |||| ||||||||||| |||| ||||||||||||||    
T  14873535 agaaaagcacataatttagtgtaattatatgtgtcggtgtcatgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgc 14873634  T
Q  280 ttcata 285  Q
    ||||||    
T  14873635 ttcata 14873640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 23016030 - 23015926
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcg-----gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 279  Q
    ||||||||||| ||| ||||||||||||| ||||||     || |||||||||||| ||||| ||||  ||||||||||| |||| ||||||||||| ||    
T  23016030 agaaaatcacataattcagtgtaattataggtgtcgatgttgtatcggacacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagc 23015931  T
Q  280 ttcat 284  Q
    |||||    
T  23015930 ttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 43001859 - 43001922
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    |||||||||||||||||||||  ||||  |||||||||| |||| |||||||||||||||||||    
T  43001859 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 23012430 - 23012380
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggaca 254  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  23012430 tgtaattatatgtgtcggtgttggacacgacacatgtctgacaccgggaca 23012380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 190 - 282
Target Start/End: Original strand, 4105282 - 4105374
Alignment:
Q  190 atcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 282  Q
    |||||| ||| ||||||||||| | |||| ||| || ||| ||| | |||||||| || ||||||||||| |||| |||||||||||||||||    
T  4105282 atcacataattcagtgtaattacaagtgtaggtatcagactcgatatgtgtctgatactgggacacgcctaatccgaggagtgtccgtgcttc 4105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 18592132 - 18592200
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||||||||||| ||||||||||||||  |||||||| || || | | ||||||||||||||||    
T  18592132 gtgtcggtgtcggacacaacacgtgtctgacatcgggacacggctaattcgatgagtgtccgtgcttca 18592200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 27932253 - 27932353
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||| ||| ||| ||||||||||| |  | | |||||||||||||||||||||| |||||  |||||||||| || | ||||||||  |||||||||    
T  27932253 agaaaattacataattcagtgtaattacaaatcttggtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcat 27932352  T
Q  285 a 285  Q
    |    
T  27932353 a 27932353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 30098391 - 30098455
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||| |||||  |||||| ||| |||| |||| |||||||||||||||    
T  30098391 gtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcata 30098455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 15382533 - 15382592
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    |||||||||| ||||||||||| |||| ||||| ||||||||||| |||| |||||||||    
T  15382533 gtgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 7677764 - 7677834
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| |||||| ||| |||| ||||| ||||||||||| |||| ||||| ||| ||||||||||    
T  7677764 gtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcata 7677834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 32630802 - 32630676
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||||||||| | |||   ||| ||||||| | | ||| || |||||||||||||||| |||||||| |||||||||||| ||||  | ||||| ||    
T  32630802 gacacgctgacaccgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgtcggatacgacacgtgtccgacattgagacacacc 32630703  T
Q  259 ttatccaaggagtgtccgtgcttcata 285  Q
    | || | |||||||||  |||||||||    
T  32630702 taattcgaggagtgtctatgcttcata 32630676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 3966521 - 3966562
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  3966521 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 3966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 15884008 - 15884057
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||||||    
T  15884008 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacac 15884057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 19579760 - 19579829
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||| |||||||||||||||  ||||| |||| ||||||||||| |||| |||||||| |||| |||||    
T  19579760 gtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaatccgaggagtgtacgtgtttcat 19579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 285
Target Start/End: Original strand, 6770523 - 6770654
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    ||||||||||| | |||| |||||||| ||||   ||| ||||||||||| ||| ||||||| ||||  ||||| |||||||||||||||| ||||        
T  6770523 gacacggacactg-acacactgacacaactaataatttaagaaaatcacataattcagtgtacttat--gtgtcagtgtcggacacgacacatgtc---- 6770615  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
     | || |||||||| |||| | ||||||||||||||||||    
T  6770616 -ctggtacacgcctaatccgaagagtgtccgtgcttcata 6770654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 16203836 - 16203785
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    |||||||| || |||  ||||||||||||||||||||||||||||| |||||    
T  16203836 agaaaatctcataatttagtgtaattatatgtgtcggtgtcggacaagacac 16203785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 16304438 - 16304367
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| || |||||||||||||||| | ||||| | |||||| || |||| |||| |||||||||||||||    
T  16304438 tgtgtcagtatcggacacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcata 16304367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 34879340 - 34879415
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||| | ||| ||||||  ||| ||||||||| | ||| ||||||||| |||||||||| |||||||||||    
T  34879340 cggacacgccggcaccgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcgatgtcggacacg 34879415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 37328883 - 37328844
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  37328883 aaaatcacaaaattcagtgtaattacatgtgtcggtgtcg 37328844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 41995534 - 41995581
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||| |||||| |||||||||| |||| |||||||||||||||||||    
T  41995534 gtgtcggacacgaggacacgcctaatcctaggagtgtccgtgcttcat 41995581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 3966562 - 3966632
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||||||||| ||| |||||  |||  |||||||| || |||| ||||||||||||||||||||    
T  3966562 gtgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 6247642 - 6247692
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacg 237  Q
    ||||||||| ||| ||||||||||| | |||||||||||||||||| ||||    
T  6247642 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacggcacg 6247692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 15382423 - 15382457
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  15382423 atgaagcacggatacggacacggacaccggacacg 15382457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 23290049 - 23289999
Alignment:
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||| |||||||| || ||||||| | |||||||||||||||    
T  23290049 acgtgtctgacaccgggacacgtctaatccaagcaatgtccgtgcttcata 23289999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 284
Target Start/End: Complemental strand, 24238661 - 24238603
Alignment:
Q  226 ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||||||||  |||| |||||| || | |||| |||||||||||||||||||    
T  24238661 ggacacgacacgtgtccaacactgggacatgcataatcctaggagtgtccgtgcttcat 24238603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 32766943 - 32766873
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||| | |||||||||||| |||||  ||| ||| || |||  ||||||||||||||||||||    
T  32766943 gtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcata 32766873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 36642757 - 36642696
Alignment:
Q  220 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 282  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||   ||||||||| |||||||    
T  36642757 ggtgtcggacacgacacgtgtccgacac-gggacacgcctaattggaggagtgtcggtgcttc 36642696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 6471930 - 6471889
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| |||||||||||||||||| |||||||    
T  6471930 agaaaatcacataattcagtgtaattatatgtgtgggtgtcg 6471889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 285
Target Start/End: Complemental strand, 19820389 - 19820329
Alignment:
Q  222 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||   |||| ||||| ||||||||||| |||  ||||||||||||||||||||    
T  19820389 tgtcggacacgac---tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcata 19820329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 41091298 - 41091257
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| |||||||||||||||||||| |||||    
T  41091298 agaaaatcacataattcagtgtaattatatgtgtcgatgtcg 41091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 17088358 - 17088402
Alignment:
Q  234 cacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    |||||||| ||||| ||||||||||| |||| |||||||||||||    
T  17088358 cacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 285
Target Start/End: Original strand, 35017125 - 35017161
Alignment:
Q  249 gggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  35017125 gggacacgcctaatccgaggagtgtccgtgcttcata 35017161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 40000558 - 40000494
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| || ||||| ||| ||||||| | |||||| ||||||  ||||||||||||||||||||    
T  40000558 gtgtcgtacgcgacatgtgcctgacaccgagacacgtcttatctgaggagtgtccgtgcttcata 40000494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 5414251 - 5414102
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatat-----------gtgtcggtgtcggacacgac 234  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||           ||||| ||||||||||||||    
T  5414251 gacacggacac-ggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgac 5414153  T
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  5414152 acgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcata 5414102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 23293053 - 23292927
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| |||||||||||   ||| | ||||||||| ||| |||| |||||| | ||||||||||||||||||||||||||| ||||| ||||||||||    
T  23293053 gacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcc 23292954  T
Q  259 ttatccaaggagtgtccgtgcttcata 285  Q
    | |||| ||||||||||||||||||||    
T  23292953 taatccgaggagtgtccgtgcttcata 23292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 19097941 - 19097836
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||||||||||  ||| |||| ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |||| ||||||| |||    
T  19097941 ttttttagaaaatcacgtaattcagtataattatatttgtcggtgtcgaacatgacacgtgtctgacacggggacacgcctta-ccaaagagtgtctgtg 19097843  T
Q  279 cttcata 285  Q
    |||||||    
T  19097842 cttcata 19097836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 49431017 - 49431140
Alignment:
Q  159 gacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgc 257  Q
    ||||||| ||||||||||| | |||  | ||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||  |||| |||||||||    
T  49431017 gacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcggacacgacacgtgtccaacaccgggacacgc 49431116  T
Q  258 cttatccaaggagtgtccgtgctt 281  Q
    ||||||| |||||||||| |||||    
T  49431117 cttatccgaggagtgtccatgctt 49431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 30982878 - 30982807
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 286  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||| |||||| |||||||||||||||||||    
T  30982878 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcatat 30982807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 28964287 - 28964189
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| ||| ||||||||||| | ||||| |||||||||||||||| | || ||||| ||||||||||| |||| |||||||||| |||||||||    
T  28964287 aaaatcacataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcata 28964189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 8423759 - 8423659
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| |||||||||||||  ||||||||||||||||||||  |||| ||||| ||||||||||| |||  || ||||||||||| ||||    
T  8423759 agaaaatcacataattcagtgtaattataaatgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcat 8423660  T
Q  285 a 285  Q
    |    
T  8423659 a 8423659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 46084050 - 46083921
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgacacgtgtctgacacggggacac 255  Q
    ||||||||||| | |||||| |||||||| |||  |||||||||||||||||||||||||           ||||||||||||||||||| |||||||||    
T  46084050 gacacagctaattgttttagtaaatcacataatctagtgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtgtctgacgcggggacac 46083951  T
Q  256 gccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||   |||||||||| |||||||||    
T  46083950 gccttataagaggagtgtccatgcttcata 46083921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 12323968 - 12324038
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||| ||||||||| || |||||| |||| |||||||| ||||||||||||||||||||    
T  12323968 gtgtcggtgtcggacatgacacgtgtgtggcacgggaacacaccttatccgaggagtgtccgtgcttcata 12324038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 203 - 285
Target Start/End: Complemental strand, 12895297 - 12895215
Alignment:
Q  203 gtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| ||||||||||||||||||||| || || ||||  ||||||||||| |||| |||||||| |||||||||||    
T  12895297 gtgtaattataagtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcata 12895215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 34306843 - 34306745
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||| | |||| |||||||||| | ||||||||||||||||||||||||||| ||||| | ||||||||| |||  |||| ||| |||||||||||    
T  34306843 aaaatcagataatgtagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcata 34306745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 715646 - 715546
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtc--ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| ||| ||||||||||| | |||| ||||||  | ||||||||| |||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  715646 aaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 715547  T
Q  285 a 285  Q
    |    
T  715546 a 715546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 752972 - 752872
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtc--ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| ||| ||||||||||| | |||| ||||||  | ||||||||| |||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  752972 aaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 752873  T
Q  285 a 285  Q
    |    
T  752872 a 752872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 24613700 - 24613631
Alignment:
Q  216 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||| |||||||||||||||||||||  ||||||| || |||| ||||||||||||||||||||    
T  24613700 tgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcata 24613631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 35161054 - 35161154
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||| || || | ||||||||||||||||||| ||||| || |||| ||| |||| |  ||||||||||||||||    
T  35161054 agaaaatcacataattcagtgtaattataagtatcagagtcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcat 35161153  T
Q  285 a 285  Q
    |    
T  35161154 a 35161154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 2361999 - 2361916
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||| | |||||||||||||||||||| |||||||||||| | ||||| ||| |||  | ||||||||||||||||||    
T  2361999 agtgtaattaaaagtgtcggtgtcggacacgactcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcata 2361916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 12797377 - 12797282
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 282  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||| || |||||||||| |||||| | || |||| |||| ||| ||||||||    
T  12797377 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgcttc 12797282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 54580087 - 54580008
Alignment:
Q  162 acgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 241  Q
    ||||||||||| ||||   ||| | ||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  54580087 acgctgacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtc 54580008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 16073414 - 16073512
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| || ||| ||||||||||| | ||||||||||||||||||| || |||| |||||   ||||||||| |||| |||||||||| |||||||||    
T  16073414 aaaatcgcataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcata 16073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 35158024 - 35157926
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| |||  |||||||||||| ||||||||||| |||||||||| ||||  |||| || |||||| | |||| || |||||||||||||||||    
T  35158024 aaaatcacataatttagtgtaattataagtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcata 35157926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 36635342 - 36635448
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgt-cg-----gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||||| ||| |||||||||||||||||| ||     ||||| ||||||||||| ||| ||||| ||||||||||| |||| | |||||||||||    
T  36635342 agaaaatcacataattcagtgtaattatatgtgttcgtgtgagtgtcagacacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtg 36635441  T
Q  279 cttcata 285  Q
    |||||||    
T  36635442 cttcata 36635448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 3947766 - 3947702
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||| |||||  |||||| ||| |||| ||||||||||||||||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 848015 - 848081
Alignment:
Q  220 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 286  Q
    |||||||||||||| |||||||  |||| ||||||| ||| |||||||||||||||||| |||||||    
T  848015 ggtgtcggacacgaaacgtgtcgaacaccgggacacacctaatccaaggagtgtccgtgtttcatat 848081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 19482727 - 19482797
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||| | |||||||||||||||| ||||| ||||||| ||| |||| |||||||| |||||||||||    
T  19482727 gtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcata 19482797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 19500858 - 19500788
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||||||  ||||| || | | ||||||| ||||||||||| |||||||||||||    
T  19500858 gtgtcggtgtcggacacgacacgcctctgataccgaggcacgcctaatccaaggagtatccgtgcttcata 19500788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 29205464 - 29205533
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 256  Q
    ||||||||| ||| ||||||||||| | |||||||||| ||||||||||| |||| ||||| ||||||||    
T  29205464 aaaatcacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtccgacaccgggacacg 29205533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 36509131 - 36509074
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctga 244  Q
    ||||||||| |||  |||||||||||||||||||| ||||||| ||||||||||||||    
T  36509131 aaaatcacataatcaagtgtaattatatgtgtcggcgtcggacgcgacacgtgtctga 36509074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 40179675 - 40179626
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  40179675 aaaatcacataattcagtgtaattatatgcgtcggtgtcggacacgacac 40179626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 20950458 - 20950362
Alignment:
Q  195 aaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatattttca 291  Q
    ||||| ||||||||||||||||||||||||| ||||||| || |||   |||| |  |||||| | |||||||||||| |||| |||||||| ||||    
T  20950458 aaaattcagtgtaattatatgtgtcggtgtcagacacgatacatgttcaacacagaaacacgcataatccaaggagtgcccgtacttcatatattca 20950362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 285
Target Start/End: Complemental strand, 4672125 - 4672026
Alignment:
Q  186 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| ||| ||| |||||||  ||||||||||||||||||| || | ||||||  ||||| || ||| | || |||||||||||||| ||||||||||    
T  4672125 gaaaattacataattcagtgtagctatatgtgtcggtgtcggatacaaaacgtgttcgacactggaacatgtctaatccaaggagtgtctgtgcttcata 4672026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 274
Target Start/End: Original strand, 21945503 - 21945610
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    |||||||||||   ||| | ||||| ||| ||| ||||||||||| | |||||||||||||||| ||||| |||| ||||| |  |||||||| |||| |    
T  21945503 gacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccga 21945602  T
Q  267 ggagtgtc 274  Q
    ||||||||    
T  21945603 ggagtgtc 21945610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 28084589 - 28084640
Alignment:
Q  232 gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    |||||||||| ||||| ||||||||||| |||| ||||||||||||||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 29205527 - 29205586
Alignment:
Q  226 ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| |||| ||||| ||||||||||| |||| |||||||| |||||||||||    
T  29205527 ggacacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcata 29205586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 53381602 - 53381531
Alignment:
Q  215 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||| ||| ||| || ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  53381602 gtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 53381531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 285
Target Start/End: Complemental strand, 32273524 - 32273462
Alignment:
Q  223 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||| || || ||||||||||| |  |||||||||||||| ||||||||||    
T  32273524 gtcggacacgacacgtatccgatacggggacacgacaaatccaaggagtgtcggtgcttcata 32273462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 40613442 - 40613504
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcgg 221  Q
    ||||||| ||||| |||||  |||| ||||||||||| ||| |||||||||||||||||||||    
T  40613442 gacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 42640549 - 42640642
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||     |||| | |||  |||||||||| |||| |||||| |||||||||||||    
T  42640549 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg-----tgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcata 42640642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 4157169 - 4157266
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| |||  |||| ||||| | |||||||||||||||||||||| |||| ||||| | || || ||| || | ||||||||| |||||||||    
T  4157169 aaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 4157456 - 4157553
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| |||  |||| ||||| | |||||||||||||||||||||| |||| ||||| | || |||||| || | |||||||||  ||||||||    
T  4157456 aaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcat 4157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 14465070 - 14465005
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 286  Q
    ||||| ||||||||||||||  ||||| |||||||| || |||  |||||||||||||||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcatat 14465005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 30298910 - 30299006
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| |||||||||||||||| | ||||||| ||||||||||| | |||  | ||||| ||| ||| ||||||||||| | ||||||||||||    
T  30298910 atgaagcacagatacggacacggaca-ctgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30299006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 30327778 - 30327874
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| |||||||||||||||| | ||||||| ||||||||||| | |||  | ||||| ||| ||| ||||||||||| | ||||||||||||    
T  30327778 atgaagcacagatacggacacggaca-ctgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30327874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 13783261 - 13783340
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| | |||| | ||||| ||||| | ||| |||| |||||||||| ||||||||||||||||| ||||||||    
T  13783261 gacacggacactg-acacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaattatatgtgccggtgtcg 13783340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 18966567 - 18966627
Alignment:
Q  225 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||| ||||||||| ||||  |||| |||||| ||| |||||||||||||||||||||    
T  18966567 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcata 18966627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 289
Target Start/End: Original strand, 4383449 - 4383488
Alignment:
Q  250 ggacacgccttatccaaggagtgtccgtgcttcatatttt 289  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  4383449 ggacacgcctaatccgaggagtgtccgtgcttcatatttt 4383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 10499311 - 10499260
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    ||||||||||| |||  |||||||||||||||||| ||||||||| ||||||    
T  10499311 agaaaatcacataatttagtgtaattatatgtgtcagtgtcggacccgacac 10499260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 16189710 - 16189773
Alignment:
Q  168 acacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    |||| ||||||  ||| ||||||||||| ||| |||||||||||| |||||||||| |||||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtgacggacac 16189773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 285
Target Start/End: Complemental strand, 23861445 - 23861370
Alignment:
Q  210 tatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||| || ||||||| |||||| |||   ||||||||| || ||| |||||| |||||||||||    
T  23861445 tatatgtgtcggtgtcagatacgacacatgtctgtcaccaagacacgcctaattcaaagagtgttcgtgcttcata 23861370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 24343560 - 24343631
Alignment:
Q  215 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| ||||| ||| |||||| ||||| |||||||||||  ||  ||||||||||||||||||||    
T  24343560 gtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcata 24343631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 44132691 - 44132644
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||||||||  ||| |||| |||||||||||||||||||||    
T  44132691 ttttttagaaaatcacgtaattcagtataattatatgtgtcggtgtcg 44132644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 8402783 - 8402721
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||| | ||| |||||||||||||||| || ||||| |||||||||| |||| |||||    
T  8402783 agaaaatcatataattcagtgtaattatatgtctcagtgtcagacacgacacttgtccgacac 8402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 9996858 - 9996920
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||||| ||| |||| ||||||||||| |||||||| ||||  ||||||||| |||||    
T  9996858 agaaaatcacataattcagtataattatatgtctcggtgtcagacataacacgtgtccgacac 9996920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 22234890 - 22234820
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| ||||||||||||||| |||||  ||||||  || |||| || ||||| |||||||||||    
T  22234890 gtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcata 22234820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 23293099 - 23293065
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  23293099 atgaagcacagatacggacacggacaccggacacg 23293065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 30838269 - 30838335
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    ||||| ||||||||| ||||||||||| |||||   ||||||||| | || ||||||||||||||||    
T  30838269 gtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 285
Target Start/End: Complemental strand, 3064926 - 3064869
Alignment:
Q  228 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| |||| ||| | | ||||||||| |||| ||||||||||||||||||||    
T  3064926 acacgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcata 3064869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 6879532 - 6879459
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||| |||| ||| ||||||||   ||||||||| |||  |||||||||| | ||||||||||||||||||    
T  6879532 gacacgccgacatagcaaaatttttggaaaaatcacataattaagtgtaattacaagtgtcggtgtcggacacg 6879459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 226
Target Start/End: Complemental strand, 12895210 - 12895116
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| |||||||||||||||||  ||||||| || ||||||||   ||| | ||||||||| ||| ||  ||||||| | ||||||||||||    
T  12895210 atgaagcacagatacggacacggacac--gacacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcg 12895116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 22440608 - 22440559
Alignment:
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||| |||||  |||||||||| |||| |||||||||||||||||||    
T  22440608 acgtgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 42014965 - 42015022
Alignment:
Q  174 ctaaattttttagaaaatcaca-aaatgcagtgtaattatatgtgtcggtgtcggaca 230  Q
    ||||| |||| ||| ||||||| |||| |||||||||||||||||| |||||||||||    
T  42014965 ctaaaattttgagataatcacataaattcagtgtaattatatgtgttggtgtcggaca 42015022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 5775341 - 5775305
Alignment:
Q  249 gggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  5775341 gggacacgcctaatccgaggagtgtccgtgcttcata 5775305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 5775399 - 5775359
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 225  Q
    ||||||||||| |||  ||||||||||||||||||||||||    
T  5775399 agaaaatcacataattaagtgtaattatatgtgtcggtgtc 5775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 13307885 - 13307957
Alignment:
Q  175 taaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    |||| |||| ||||||| ||| ||| || |||||| | | |||| |||||||||||||||||||||| |||||    
T  13307885 taaaattttgagaaaatgacataattcaatgtaatcacaagtgttggtgtcggacacgacacgtgtcagacac 13307957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 22234973 - 22234890
Alignment:
Q  143 acggacacggacaccggacacgctgacacagctaaattttttagaaaa-tcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||| |||||||| |||||||| ||||| ||||||  ||| | |||| ||||| ||| |||||||||| |||||||||||||||    
T  22234973 acggatacggacac-ggacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcg 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 30103397 - 30103298
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| |||  |||||||| |||||||||||||||  ||||||||  |||||||||   ||||||  || |||| |||||||||  ||||||||    
T  30103397 agaaaatcacataatt-agtgtaatcatatgtgtcggtgtcaaacacgacatatgtctgacatcaggacacatctaatccgaggagtgtctctgcttcat 30103299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 8e-40; HSPs: 69)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 18367828 - 18367965
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgt-----------cggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||           ||||||| |||||||||| ||||||||||    
T  18367828 gacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacac 18367927  T
Q  248 ggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18367928 ggggacacgccttatccaaggagtgtccgtgcttcata 18367965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 158 - 285
Target Start/End: Complemental strand, 16488658 - 16488520
Alignment:
Q  158 ggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt-----------gtcggacacgacacgtgtctgaca 246  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||| ||    
T  16488658 ggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggca 16488559  T
Q  247 cggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  16488558 cggggacacgccttatccaaggaatgttcgtgcttcata 16488520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 285
Target Start/End: Original strand, 13789134 - 13789272
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    |||||||||| || |||||  ||||||||||||||||| | ||||||| |||||||||||||||||||||| ||  ||||||||| ||||||||||||||    
T  13789134 gacacggacatcg-acacgtcgacacagctaaatttttaaaaaaatcataaaatgcagtgtaattatatgtatcaatgtcggacatgacacgtgtctgac 13789232  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    | ||||| ||||||||| |||||||||| |||||||||||    
T  13789233 atggggatacgccttattcaaggagtgttcgtgcttcata 13789272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 146 - 285
Target Start/End: Original strand, 13797753 - 13797891
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    |||||||||| || |||||  ||||||||||||||||| | ||||||| |||||||||||||||||||||| ||  ||||||||| ||||||||||||||    
T  13797753 gacacggacatcg-acacgtcgacacagctaaatttttaaaaaaatcataaaatgcagtgtaattatatgtatcaatgtcggacatgacacgtgtctgac 13797851  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    | ||||| ||||||||| |||||||||| |||||||||||    
T  13797852 atggggatacgccttattcaaggagtgttcgtgcttcata 13797891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 130 - 285
Target Start/End: Complemental strand, 17841684 - 17841530
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||   ||| | ||||||||| |||  |||||||||| | ||| |||||||||||    
T  17841684 atgaagcactgatacggacacggacactg-acacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcggac 17841586  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| ||||| ||||| | ||||||||| |||| ||||||||||||||||||||    
T  17841585 acgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 34595154 - 34595252
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||||||||||||||||||    
T  34595154 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcata 34595252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 146 - 286
Target Start/End: Original strand, 9658859 - 9658999
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    ||||||||||| | |||||| ||||| |||||   ||| ||||||||||| ||| |||||||||||||| |||||||||  |||||||||||||||||||    
T  9658859 gacacggacactg-acacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgttagacacgacacgtgtctgac 9658957  T
Q  246 acggggacacgcctta-tccaaggagtgtccgtgcttcatat 286  Q
    || || |||||||| | |||||||||||||||||||||||||    
T  9658958 accggaacacgcctaattccaaggagtgtccgtgcttcatat 9658999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 130 - 285
Target Start/End: Original strand, 28152063 - 28152216
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| |||| |||||||||||| | |||||| |||| ||||||   ||| | ||||||||| ||| ||||||||||| | |||||||||||||||    
T  28152063 atgaagcacggatatggacacggacactg-acacgccgacaaagctaataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgtcggac 28152160  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||| ||||| |||||| |||| |||| |||||||| |||||||||||    
T  28152161 acgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcata 28152216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 285
Target Start/End: Complemental strand, 17327719 - 17327591
Alignment:
Q  162 acgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtc-----ggtgtcggacacgacacgtgtctgacacggggacacg 256  Q
    |||| |||||| ||||  |||| ||||||||||| |||  ||||||| ||||||||||      ||||||||||||||||||||||||||| ||||||||    
T  17327719 acgccgacacaactaagattttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcggacacgacacgtgtctgacacagggacacg 17327620  T
Q  257 ccttatccaaggagtgtccgtgcttcata 285  Q
    ||| |||| ||||||||||||||||||||    
T  17327619 cctaatccgaggagtgtccgtgcttcata 17327591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 283
Target Start/End: Complemental strand, 32978969 - 32978842
Alignment:
Q  157 cggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacac 255  Q
    ||||||||| ||||||||||| | |||  | |||| |||| |||  |||||||||| | |||||||||||||||||||||| |||| ||||| |||||||    
T  32978969 cggacacgccgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacac 32978870  T
Q  256 gccttatccaaggagtgtccgtgcttca 283  Q
    | || |||||||||||||||||||||||    
T  32978869 gtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 185 - 283
Target Start/End: Complemental strand, 7996419 - 7996325
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||| | ||| ||||||||||||||| ||||||||||    |||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  7996419 agaaaatcatataattcagtgtaattatatgcgtcggtgtcg----cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 7996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 8022382 - 8022476
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||| | ||| ||||||||||||||| ||||||||||    |||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  8022382 agaaaatcatataattcagtgtaattatatgcgtcggtgtcg----cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 8022476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 12696383 - 12696446
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  12696383 gtgtcggacacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 134 - 286
Target Start/End: Complemental strand, 5626792 - 5626640
Alignment:
Q  134 agcactgatacggacacggacac----cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||| |||||||||||||||||    | ||||||| |||||| |||| ||||||||||||||||  | | |||||||| ||||||||||||||||||||    
T  5626792 agcacggatacggacacggacacgacactgacacgccgacacaactaatttttttagaaaatcacttagttcagtgtaaatatatgtgtcggtgtcggac 5626693  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 286  Q
    |||||||    |||  | ||| ||| ||||||||| ||||||||  |||||||||||    
T  5626692 acgacac----ctgtaatgggaacatgccttatccgaggagtgtttgtgcttcatat 5626640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 7377979 - 7378097
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    ||||| ||||||  ||| ||||||||||| ||| || |||||||||||||||||||||||||||||||| |  || ||||| |||||||| || |||  |    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacgacatgcatccgacaccgggacacggctaatctga 7378078  T
Q  267 ggagtgtccgtgcttcata 285  Q
    | |||||||||||||||||    
T  7378079 gaagtgtccgtgcttcata 7378097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 33001328 - 33001230
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| |||  | |||||||||||||||||||||||||||||||||||||||||||| |  | |||||| |||||| ||||||  ||||||||||    
T  33001328 aaaatcacataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgacaccgaaatacgcctaatccaaagagtgtttgtgcttcata 33001230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 7265634 - 7265535
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| | || |||| ||||| || | | |||| |||| ||||| |||||||||||||    
T  7265634 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaatacatgtccgacaccggaatatgcctaatccgaggagcgtccgtgcttcat 7265535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 8365519 - 8365449
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||    
T  8365519 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcata 8365449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 10339125 - 10339055
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||| |||  ||||||||||||||||||||    
T  10339125 gtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 10339055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 28715315 - 28715413
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||| ||| ||||||||||| | ||||||||||||||||||||||||||  ||||| ||||||||||| || | || ||||| |||||||||||    
T  28715315 aaaatgacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcata 28715413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 8777052 - 8776909
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacg-----tgt 240  Q
    ||||||||||| | |||||| |||||| ||||   ||| | ||||||||||||| ||||||||||| | |||| ||||||||||||||||||     |||    
T  8777052 gacacggacactg-acacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacgacacgacacgtgt 8776954  T
Q  241 ctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    | ||||| | ||||| ||| |||| ||||||||||||||||||||    
T  8776953 ccgacaccgagacacacctaatccgaggagtgtccgtgcttcata 8776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 13360413 - 13360314
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||  |||| ||||| | ||||||||| |||| | |||||||||||||||||    
T  13360413 agaaaatcacataattcagtgtaattatatgtttcggtgtcagacacaaca-atgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcat 13360315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 31384984 - 31385048
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| ||||||||||||||||  |||| ||||||||||| |||||||||||||||||||||||||    
T  31384984 gtgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 32511707 - 32511607
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||  |||||||||  ||  ||||||| |||  |||||||||||||||||||    
T  32511707 agaaaatcacataattcagtgtaattataagtgttggtgtcggatacgacatatgtctgacatcggagcacgcctaatcggaggagtgtccgtgcttcat 32511608  T
Q  285 a 285  Q
    |    
T  32511607 a 32511607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 206 - 285
Target Start/End: Original strand, 4877982 - 4878060
Alignment:
Q  206 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| | |||||||||||||||||||||| |||| ||||| || |||||||| |||| ||||||||||||||||||||    
T  4877982 taattacaagtgtcggtgtcggacacgacacatgtccgacacagg-acacgcctaatccgaggagtgtccgtgcttcata 4878060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 16766756 - 16766826
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||| |||| | || |||||||||||||||    
T  16766756 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcata 16766826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 19040344 - 19040421
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    ||||||| ||||| |||||   ||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  19040344 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacgacac 19040421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 7740660 - 7740712
Alignment:
Q  186 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgt 238  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  7740660 gaaaatcacaaaattgagtgtaattatatgtgtcagtgtcggacacgacacgt 7740712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 13364746 - 13364646
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| | ||| ||||||||| |||||||||||||| |||||||| || ||||||||||  ||||||| ||  ||| | ||||||| |||||||||    
T  13364746 agaaaatcatataattcagtgtaatcatatgtgtcggtgttggacacgatacatgtctgacaccaggacacgtctattccgacgagtgtctgtgcttcat 13364647  T
Q  285 a 285  Q
    |    
T  13364646 a 13364646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 30851637 - 30851676
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctg 243  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30851637 tgtaattatatgtgtcggtgtcggacacgacacgtgtctg 30851676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 170 - 285
Target Start/End: Original strand, 4388088 - 4388198
Alignment:
Q  170 acagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaagga 269  Q
    ||||| || ||||||||||||||||| ||| ||| ||||||||||||||| ||||||     | |  |||||||||||| ||||||||||||||| || |    
T  4388088 acagccaatttttttagaaaatcacataatccagggtaattatatgtgtcagtgtcg----tggc-ggtgtctgacacgaggacacgccttatccgagaa 4388182  T
Q  270 gtgtccgtgcttcata 285  Q
    ||||| ||||||||||    
T  4388183 gtgtctgtgcttcata 4388198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 7977897 - 7977771
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| |||||||||||   ||| | ||||| ||| ||| ||||||||||| | ||||||||||||||||| |||  |||| ||||  |  |||||||    
T  7977897 gacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacacaacatatgtccgacaacgaaacacgcc 7977798  T
Q  259 ttatccaaggagtgtccgtgcttcata 285  Q
    | ||| ||||||||| |||||||||||    
T  7977797 taatctaaggagtgttcgtgcttcata 7977771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 26562679 - 26562748
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| ||||| ||||||  ||| ||||||||||| ||| |||||||||||||||||||| |||||    
T  26562679 cggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 26562748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 7041466 - 7041574
Alignment:
Q  21 taaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgt 120  Q
    |||||||||||| ||||||||| | |||  |||| || ||||||||  |||| ||||||||| | |  ||||| ||||||||||||||||| ||||| ||    
T  7041466 taaagatgacacaattccctttggcaacgcacaaatccgaagcagaaacagagaacgaacatacttctcccaagaacaaaaccctatcccctaaactagt 7041565  T
Q  121 caatttcac 129  Q
    ||| |||||    
T  7041566 caacttcac 7041574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 34446618 - 34446689
Alignment:
Q  215 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||  |||| ||| ||| |||||||| ||||||| ||| |||||||||||||||||||||||||    
T  34446618 gtgtcggtgtccaacaccgacgcgtatctgacactgggacacacctaatccaaggagtgtccgtgcttcata 34446689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 7248417 - 7248487
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||| |||||| ||| ||||| ||||| |||||||| |  |||| ||||||||||||||||||||    
T  7248417 gtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcata 7248487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 9107370 - 9107300
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||| ||  ||||| ||||| ||||||| ||| |||| ||||||| ||||||||||||    
T  9107370 gtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcata 9107300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 24645501 - 24645599
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| ||| |||| || ||| | ||||||||||| ||||||||||||||| |||||   |||||| || |||| | ||||||| ||||||||||    
T  24645501 aaaatcacataattcagtatagttacaagtgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcata 24645599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 9025535 - 9025494
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  9025535 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 31579266 - 31579212
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 241  Q
    ||||||||||| ||| ||||||||||||  |||||||||||||||||||||| ||||    
T  31579266 agaaaatcacataattcagtgtaattat--gtgtcggtgtcggacacgacacatgtc 31579212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 4118444 - 4118412
Alignment:
Q  132 gaagcactgatacggacacggacaccggacacg 164  Q
    |||||||||||||||||||||||||||||||||    
T  4118444 gaagcactgatacggacacggacaccggacacg 4118412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 285
Target Start/End: Original strand, 16833267 - 16833426
Alignment:
Q  130 atgaagcactgatacggacacggacaccg-----gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 224  Q
    |||||||||||||||||||||| |||| |     ||||||| |||||| ||||   ||| | ||||||||| | | ||||||||||| | ||||||||||    
T  16833267 atgaagcactgatacggacacg-acacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgt 16833365  T
Q  225 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
      ||||||||||| ||| |||||  |||||| ||  |||| ||||||||| || |||||||    
T  16833366 tagacacgacacgcgtccgacaccaggacacaccgaatccgaggagtgtctgtacttcata 16833426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 853898 - 853811
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    ||||||||| |||  |||| ||||| | |||||||||||||| |||||| ||||| ||||  | ||||||||| |||||| |||||||    
T  853898 aaaatcacataattaagtgcaattacaagtgtcggtgtcggatacgacatgtgtccgacatagagacacgcctaatccaatgagtgtc 853811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 5732551 - 5732504
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||||| | |  |||||||||||||||||||||||||||||||    
T  5732551 agaaaatcacatattttagtgtaattatatgtgtcggtgtcggacacg 5732504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 6898305 - 6898222
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||| | |||||||||||||||||||  ||||||  |||| |  |||||||| |||| | |||||| |||||||||||    
T  6898305 agtgtaattacaagtgtcggtgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcata 6898222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 226
Target Start/End: Original strand, 7027262 - 7027301
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  7027262 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 285
Target Start/End: Original strand, 10649371 - 10649406
Alignment:
Q  250 ggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||| |||||||||||||||||||||||||    
T  10649371 ggacacgcctaatccaaggagtgtccgtgcttcata 10649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 7938062 - 7938096
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  7938062 atgaagcacggatacggacacggacaccggacacg 7938096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 8714039 - 8714109
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||||| | || ||||  ||||||||||  |||| |||||||||  |||||||||    
T  8714039 gtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgtctttgcttcata 8714109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 8931668 - 8931602
Alignment:
Q  160 acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||||| ||||||||||||  ||| ||||||| ||| ||| |||| ||||||||||||||| |||||    
T  8931668 acacgccgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcg 8931602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 9107436 - 9107370
Alignment:
Q  160 acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||||| |||||||||||   ||| | ||||||||||||| ||||||||||| | ||||||||||||    
T  9107436 acacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 9629401 - 9629443
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgg 227  Q
    ||||||||||| ||| || ||||||||||||||||||||||||    
T  9629401 agaaaatcacataattcaatgtaattatatgtgtcggtgtcgg 9629443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 231
Target Start/End: Complemental strand, 21924960 - 21924930
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacac 231  Q
    |||||||||||||||||||||||||||||||    
T  21924960 cagtgtaattatatgtgtcggtgtcggacac 21924930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 31959214 - 31959268
Alignment:
Q  231 cgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||| ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  31959214 cgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 7012784 - 7012845
Alignment:
Q  21 taaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacat 82  Q
    |||||||||||  ||||||||| | |||| |||| || |||||| |||||||||||||||||    
T  7012784 taaagatgacagaattccctttggcaacacacaaatccgaagcacaggcagaaaacgaacat 7012845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 7029850 - 7029891
Alignment:
Q  88 ccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 129  Q
    |||||| ||||||||||||||||| ||||||||||| |||||    
T  7029850 ccccaagaacaaaaccctatccccgaaactcgtcaacttcac 7029891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 283
Target Start/End: Complemental strand, 8389513 - 8389411
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattata-tg---tgtcggtgtcggacacgacac-gtgtctgacacggggacacgccttatccaaggagtgtccgtgc 279  Q
    ||||||||| | ||| ||||||||||||| ||   |||||||||||||| | |||| ||||| ||||| ||||||| ||| |||| ||||||||||||||    
T  8389513 agaaaatcatataattcagtgtaattatagtgtcatgtcggtgtcggac-caacacggtgtccgacaccgggacacacctaatccgaggagtgtccgtgc 8389415  T
Q  280 ttca 283  Q
    ||||    
T  8389414 ttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 9159574 - 9159533
Alignment:
Q  88 ccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 129  Q
    |||||| ||||||||||||||||| |||||||| ||||||||    
T  9159574 ccccaagaacaaaaccctatcccctaaactcgttaatttcac 9159533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 9170854 - 9170895
Alignment:
Q  88 ccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 129  Q
    |||||| ||||||||||||||||| |||||||| ||||||||    
T  9170854 ccccaagaacaaaaccctatcccctaaactcgttaatttcac 9170895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 9617452 - 9617493
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| || |||||||||||||||||||||||    
T  9617452 agaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 29020932 - 29020985
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgt 240  Q
    |||||| || ||| ||||||||||||| ||||  ||||||||||||||||||||    
T  29020932 aaaatcgcataattcagtgtaattataggtgtttgtgtcggacacgacacgtgt 29020985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 1191759 - 1191679
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    |||||||||||   ||| | ||| ||||||||| ||||||||||| | |||||| ||| ||||||||| |||||| |||||    
T  1191759 gacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcgatgttggacacgacgcgtgtccgacac 1191679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 1700372 - 1700416
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    ||||||||| | | ||||||||||||| |||||||||||||||||    
T  1700372 aaaatcacatatttcagtgtaattataagtgtcggtgtcggacac 1700416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 5970215 - 5970183
Alignment:
Q  130 atgaagcactgatacggacacggacaccggaca 162  Q
    ||||||||| |||||||||||||||||||||||    
T  5970215 atgaagcacagatacggacacggacaccggaca 5970183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 7938170 - 7938218
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||| | ||||||||| |||| ||||||||||||||||||||    
T  7938170 gtgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttcata 7938218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 9027158 - 9027237
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| | |||||| ||||| |||||   ||| ||| ||||||| ||| | ||||||||||||||||||||||||    
T  9027158 gacacggacactg-acacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcg 9027237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 9522949 - 9523001
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    |||||||||||||||  ||||||||||| ||||| | ||||||||| ||||||    
T  9522949 tgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaatccaa 9523001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 9629448 - 9629512
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| ||| ||||| ||||| | |||||| || |||| |||||||||| |||||||||    
T  9629448 gtgtcggacacaacatgtgtccgacactgagacacgtctaatccgaggagtgtccatgcttcata 9629512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 281
Target Start/End: Original strand, 24138485 - 24138545
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    |||| ||||| |||||||||||||||| | |||| |||| |||| | ||||||||||||||    
T  24138485 gtgttggacatgacacgtgtctgacacagagacatgcctaatccgaagagtgtccgtgctt 24138545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 179 - 285
Target Start/End: Complemental strand, 18213080 - 18212974
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| ||||||||| |||    
T  18213080 ttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtg 18212981  T
Q  279 cttcata 285  Q
    |||||||    
T  18212980 cttcata 18212974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 283
Target Start/End: Original strand, 39138451 - 39138560
Alignment:
Q  174 ctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 273  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| || ||||| ||||||||||||||||||||| | |||| |    
T  39138451 ctaaattttttagaaaatcacataattcagtgtaattatatatgtcggtgtcggacacgatacatgtctaacacggggacacgccttatcccaagagtat 39138550  T
Q  274 ccgtgcttca 283  Q
    | ||||||||    
T  39138551 ctgtgcttca 39138560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 130 - 285
Target Start/End: Original strand, 15680773 - 15680927
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| |||||||||| |||||| | |||||| |||| ||||||   ||  | ||||||||| |||  |||||||||||| |||||||||||||||    
T  15680773 atgaagcacggatacggacatggacactg-acacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcggac 15680871  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||| ||||| | |||||| || || | ||||||||||||||||||||    
T  15680872 acgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcata 15680927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 32287504 - 32287404
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||| || ||||||||||||||||||||| |||| ||||| ||||| ||||||| ||| |||| |||||||||||||||||||    
T  32287504 agaaaatcacataattcagtgcaagtatatgtgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 32287405  T
Q  285 a 285  Q
    |    
T  32287404 a 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 130 - 285
Target Start/End: Original strand, 9778454 - 9778623
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg---------ctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcg 220  Q
    ||||||||| |||||||||||||||||||||||||         ||||||||||| |   ||| | ||||||||| ||| |||| |||||| | ||||||    
T  9778454 atgaagcacggatacggacacggacaccggacacgacacggacactgacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcg 9778553  T
Q  221 gtgt-----cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||     ||||||| ||||||||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  9778554 gtgtcgtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcata 9778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 20549809 - 20549909
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||| |||| |||| ||||  | ||||||||| |||| ||||||| |||||||||||    
T  20549809 agaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcat 20549908  T
Q  285 a 285  Q
    |    
T  20549909 a 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 21880170 - 21880270
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||| ||| ||| ||||||||||| | |||||||||||||||||||||| |||| |||||  |||||||||| |||| || ||||||||||||||||    
T  21880170 agaaaattacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcat 21880269  T
Q  285 a 285  Q
    |    
T  21880270 a 21880270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 5409903 - 5409772
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggggac 253  Q
    |||||||||| ||||||||   ||| | ||||||||| ||| ||||| ||||| | ||||||||||||     ||||||||||||||| ||||| |||||    
T  5409903 gacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggac 5409804  T
Q  254 acgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| |||| ||||||||||||||||||||    
T  5409803 acgcctaatccgaggagtgtccgtgcttcata 5409772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 285
Target Start/End: Original strand, 598245 - 598326
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||| || ||||||||||| ||||||||||||||| ||||| ||||||||||| |||| || |||||||||||||||||    
T  598245 tgtaattgtaagtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 598326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 43027508 - 43027405
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    ||||||||| |||||||||||| || | ||||||||||||     ||||||||||||||| ||||| ||||||||||| |||| | ||||||||||||||    
T  43027508 aaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgctt 43027409  T
Q  282 cata 285  Q
    ||||    
T  43027408 cata 43027405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 24339701 - 24339771
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||||||| || ||||| ||||||||||| |||| ||||||| ||||||||||||    
T  24339701 gtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcata 24339771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 21864843 - 21864926
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||| | |||||| |||||||||||||||||||| ||||| |||||||| || || | ||||||||| ||||||||||    
T  21864843 agtgtaattacaagtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcata 21864926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 32094020 - 32093955
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacac-ggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcata 32093955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 5835265 - 5835337
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgc 257  Q
    ||||||| ||| ||| ||||||||||||||||||||||||| |||| |||| |||||||| || |||||||||    
T  5835265 agaaaataacataattcagtgtaattatatgtgtcggtgtcagacatgacatgtgtctgataccgggacacgc 5835337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 9482952 - 9483003
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  9482952 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacgcgacac 9483003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 12278853 - 12278943
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggaca-cgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 275  Q
    ||||||| ||| ||| ||||||||||||||||||| |||||||||| | || |||||||||||| ||||||| ||| |||| ||||||||||    
T  12278853 agaaaatgacataattcagtgtaattatatgtgtc-gtgtcggacaccaacgcgtgtctgacaccgggacacacctaatcctaggagtgtcc 12278943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 25822717 - 25822784
Alignment:
Q  218 tcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| |||||||||||||||||||||||  |||||| |||| ||| |||||||||||||| ||||||    
T  25822717 tcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcata 25822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 26733324 - 26733411
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    ||||||||| ||| |||| |||||| |||||||||||||||||||||| | |||| || ||||| |||||||| |||| ||| |||||    
T  26733324 aaaatcacataattcagtctaattaaatgtgtcggtgtcggacacgacgcatgtccgatacgggaacacgcctaatccgaggggtgtc 26733411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 22484017 - 22484143
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| ||||| |||||   |||||||||||  || ||| |||| |||||||||||||||||||| |||| ||||| |||| ||||  | |||| | |    
T  22484017 gacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtcagacatgacacatgtccgacatcgagacatgtc 22484116  T
Q  259 ttatccaaggagtgtccgtgcttcata 285  Q
    | |||| || |||||||||||||||||    
T  22484117 tgatccgagaagtgtccgtgcttcata 22484143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 285
Target Start/End: Original strand, 33994236 - 33994330
Alignment:
Q  191 tcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||| ||||| ||||| | ||||||||||| |||||||||| ||||  |||| | ||||||||| ||||||||||||| |||| ||||||    
T  33994236 tcacataattcagtgcaattacaagtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcata 33994330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 181 - 285
Target Start/End: Complemental strand, 18035909 - 18035806
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgct 280  Q
    |||||| |||||||| ||| ||| ||||||| ||||||| ||||  || | ||||| |||||||||| || ||||| || |||| |||||||||||||||    
T  18035909 ttttaggaaatcacataattcagcgtaattacatgtgtcagtgtgagataggacacatgtctgacac-ggaacacgtctaatccgaggagtgtccgtgct 18035811  T
Q  281 tcata 285  Q
    |||||    
T  18035810 tcata 18035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 285
Target Start/End: Original strand, 1433490 - 1433577
Alignment:
Q  203 gtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||||     |||| |||| ||||| |||||  ||||||| || |||| ||||||||||||||||||||    
T  1433490 gtgtaattatatgtgtcggtgtcgtgtcggacaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcata 1433577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 41020516 - 41020607
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||| |||  |||||||||||||| |||||||| | ||||||||| | ||| |||| |||||||| || |||||| || ||||||||    
T  41020516 aaaatcacataatttagtgtaattatatgcgtcggtgttgaacacgacacatatctaacaccgggacacgtctaatccaaagaatgtccgtg 41020607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 285
Target Start/End: Complemental strand, 21568692 - 21568562
Alignment:
Q  156 ccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggaca-cgacacgtgtctgacacggggaca 254  Q
    |||||||||||||||| |||||   ||| |||||||| || |||  |||||||| ||||| |||||||||||| | | || |||||| ||||| ||||||    
T  21568692 ccggacacgctgacacggctaataatttaagaaaatctcataattaagtgtaatcatatgagtcggtgtcggataccaacgcgtgtcggacaccgggaca 21568593  T
Q  255 cgccttatccaaggagtgtccgtgcttcata 285  Q
     || | |||  ||||||||| ||||||||||    
T  21568592 tgcttaatctgaggagtgtctgtgcttcata 21568562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 25481894 - 25482020
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| |||||||||||   ||| | ||||||||| ||| ||||||||||| | |||| |||||||||||||| | ||||| ||||  |  ||||||     
T  25481894 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacgatatgtgtccgacattgaaacacgct 25481993  T
Q  259 ttatccaaggagtgtccgtgcttcata 285  Q
    | || ||| |||| |||||||||||||    
T  25481994 taattcaaagagtatccgtgcttcata 25482020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 27093454 - 27093364
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 275  Q
    ||||||||||| |||  |||||||||||||| ||||||||  ||||||||| ||||| |||||  |||||| ||| |||| | ||||||||    
T  27093454 agaaaatcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaatccgatgagtgtcc 27093364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 27184847 - 27184937
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 275  Q
    ||||||||||| |||  |||||||||||||| ||||||||  ||||||||| ||||| |||||  |||||| ||| |||| | ||||||||    
T  27184847 agaaaatcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaatccgatgagtgtcc 27184937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 1401043 - 1401141
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||| ||||| ||| ||||||||||||| || |||||||| |||||||||  |||| ||||  ||||||| ||| |||  |||||||||| ||||||||    
T  1401043 agaaactcacataattcagtgtaattataagtatcggtgtccgacacgaca--tgtccgacatcgggacacacctaatctgaggagtgtccatgcttcat 1401140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 7438766 - 7438835
Alignment:
Q  216 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||  ||||||||| |||  |||||  |||||||||| || ||||||||||||||||||||||    
T  7438766 tgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcata 7438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 19213817 - 19213870
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgac 234  Q
    ||||| ||||||||| |||||||||||| || | ||||||||||||||||||||    
T  19213817 ttttaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcggacacgac 19213870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 22602751 - 22602710
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  22602751 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 22602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 285
Target Start/End: Complemental strand, 29763187 - 29763130
Alignment:
Q  228 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||| ||||   |||||||||| |||| ||||||||||||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcata 29763130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 640134 - 640182
Alignment:
Q  188 aaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    |||||||| ||| ||||||||||||||||||||||||| || |||||||    
T  640134 aaatcacataattcagtgtaattatatgtgtcggtgtcagatacgacac 640182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 7133285 - 7133213
Alignment:
Q  214 tgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||| ||| |||||| ||||| ||||||| ||| |||  ||||| ||||||||||||||    
T  7133285 tgtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcata 7133213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 8842322 - 8842282
Alignment:
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  8842322 gacaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 281
Target Start/End: Original strand, 13770750 - 13770810
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    ||||||||||| ||||||||| ||||| || |||||||| |||| | ||||||||||||||    
T  13770750 gtgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 24105712 - 24105796
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| | ||||||| ||||| ||| ||| ||||| ||||| ||||||||||| | || ||||||||  ||||||||||    
T  24105712 cagtgtaattacaagtgtcggagtcgggcacaacatgtgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcata 24105796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 25791617 - 25791711
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| ||||||||||| |||| | ||||||| ||||| ||||| | ||| ||||| ||||| ||| || |||| ||||||||||||||||||    
T  25791617 atgaagcacggatacggacacagaca-ctgacacgccgacaccgctaattatttgagaaattcacataat-caatgtagttatatgtgtcggtgtcg 25791711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 3721111 - 3721158
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||||| |||  ||| |||||||||||||||||||||||||||    
T  3721111 agaaaatcacataatttagtataattatatgtgtcggtgtcggacacg 3721158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 4794951 - 4795018
Alignment:
Q  218 tcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||| ||||||||    ||||| || ||||||| |||||| ||||||||||    
T  4794951 tcggtgtcggacacgacacgtatctgacacctaaacacgtctaatccaagaagtgtctgtgcttcata 4795018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 8234166 - 8234245
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    ||||| ||| ||| ||||||| ||| | ||| |||||||||||||||||| |||| ||||| | ||||||||| ||||||    
T  8234166 aaaataacataattcagtgtagttacaagtgccggtgtcggacacgacacatgtccgacaccgagacacgcctaatccaa 8234245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 17851445 - 17851488
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 224  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||    
T  17851445 ttttagaaaatcacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 17852056 - 17852118
Alignment:
Q  223 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||| |||||||||| ||||| | ||||| ||| || | ||||||||||||||||||||    
T  17852056 gtcggacatgacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcata 17852118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 35862027 - 35862069
Alignment:
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| |||||||||| |||| ||||||||||||||||||||    
T  35862027 gacacgaggacacgcctaatccgaggagtgtccgtgcttcata 35862069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 1656676 - 1656721
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattat 212  Q
    |||||| |||||||||||| ||||||||| ||| ||||||||||||    
T  1656676 gacacaactaaattttttaaaaaatcacataattcagtgtaattat 1656721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 3554528 - 3554447
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||  ||||||||||||||||||||| | ||| |||| | |||||| || || | | ||||||| ||||||||||    
T  3554528 tgtaattatagatgtcggtgtcggacacgacacatatctaacactgagacacgtctaattcgaagagtgtctgtgcttcata 3554447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 20545249 - 20545184
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 286  Q
    |||||| ||||||||| |||| ||||||||||||||  | || | ||||||||| |||||||||||    
T  20545249 gtgtcgtacacgacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcatat 20545184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 24146830 - 24146879
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggaca 230  Q
    ||||||||||||||| ||| || | |||||||||||||||||||| ||||    
T  24146830 ttttagaaaatcacataattcaatataattatatgtgtcggtgtctgaca 24146879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 26033461 - 26033392
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| |||| |||||||||| || || | ||||| ||| |||| ||||||||||||| |||||    
T  26033461 gtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 277
Target Start/End: Original strand, 41918906 - 41918975
Alignment:
Q  208 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgt 277  Q
    ||||||| ||||| ||||| ||||| || |||||||||||||  || ||| |||||| ||||||||||||    
T  41918906 attatatatgtcgttgtcgaacacggcaagtgtctgacacggaaacccgcattatccgaggagtgtccgt 41918975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 2334314 - 2334378
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||| |||| ||||| |  ||||| || |||| ||||||||||||| ||||||    
T  2334314 gtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcata 2334378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 6490786 - 6490834
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||| ||||||||| | |||| ||||||||||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcata 6490834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 286
Target Start/End: Complemental strand, 7197392 - 7197237
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| |||||| |||| ||||  | |||||| |||||||||||   ||| | |||||||   ||| || |||||||| | |||||||||||||||    
T  7197392 atgaagcacggatacgaacacagacattg-acacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcggac 7197294  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 286  Q
    || |||| |||| ||||| |||| || | |  ||| || | ||||||||||||||||    
T  7197293 acaacacatgtccgacaccgggatactcttattccgagaaatgtccgtgcttcatat 7197237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 247
Target Start/End: Original strand, 9933332 - 9933364
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    |||||||||||||||||||||| ||||||||||    
T  9933332 gtgtcggtgtcggacacgacacatgtctgacac 9933364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 10359633 - 10359717
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||| |||||| ||||||| |||||  ||||| ||||| | |||||| || |||| |   ||||||||||||||||    
T  10359633 cagtgtaattataggtgtcgatgtcggatacgacttgtgtccgacaccgagacacgtctaatccgaaaggtgtccgtgcttcata 10359717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 11738236 - 11738152
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||| |||||| ||||||| | || ||||||   |||| | ||||||||| |||  ||||||||||||| ||||||    
T  11738236 cagtgtaattatacgtgtcgctgtcggaaatgagacgtgttccacactgagacacgcctaatcagaggagtgtccgtgtttcata 11738152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 28155624 - 28155672
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| |||||  |||||||||| ||||||||| |||||||||||||||    
T  28155624 gtgtcggacaccaggacacgcctaatccaaggaatgtccgtgcttcata 28155672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 32308084 - 32308179
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||||||||  ||||| ||| |||||| | |||||| ||||| |||||   ||| ||||||||||| ||| |||||||||| |||||||| ||||||    
T  32308084 atgaagcacaaatacgaacatggacactg-acacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcg 32308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 6063 - 5926
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgga-----------cacgacacgtgtctgacac 247  Q
    ||||||| || ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |           |||||||||||||||||||    
T  6063 gacacgccgatacatctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtatcggtgtcgaacacgacacgtgtctgacac 5964  T
Q  248 ggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
     | ||||||||||||||||||||||||||||| |||||    
T  5963 agagacacgccttatccaaggagtgtccgtgcctcata 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 501 - 403
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||| |||||| ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  501 aaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 285
Target Start/End: Original strand, 14506 - 14645
Alignment:
Q  143 acggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtct 242  Q
    ||||| ||||||||||||||||| |||||| ||||   ||| | ||||||||| ||| ||||||||||| | |||   |||||||||||||||||||||     
T  14506 acggatacggacaccggacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg---gtgtcggacacgacacgtgtcc 14602  T
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| | ||||||||| ||| ||||||||| |||||||||||    
T  14603 gacaccgagacacgcctaatcgaaggagtgtacgtgcttcata 14645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 9878 - 9957
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||| |||||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9878 gacatggacaccg-acacgccgacacagctaatttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 9957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 13454 - 13523
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||||||||||||||| |||||||||  |||||| ||| ||||||||||||||||||||||||    
T  13454 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 21873 - 21804
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||||||||||||||| |||||||||  |||||| ||| ||||||||||||||||||||||||    
T  21873 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 45555 - 45471
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||| | |||| |||| |||||| || ||| |||||||||||    
T  45555 cagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgcgacatgcctaatccaaagattgtacgtgcttcata 45471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 70298 - 70394
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||| ||| ||| ||||||||||||| ||||||||||||||||||||||||||| |||||  ||||| |||| |||| | |||||| |||||||||    
T  70298 aaaataacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 8833 - 8916
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||| | ||||||||| |||  |||||| |||||||||||||    
T  8833 agtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcata 8916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 241653 - 241723
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||| |||| || |||||||||||||||||    
T  241653 gtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 241723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 4922 - 4822
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtc--ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| ||| ||||||||||| | |||| ||||||  | ||||||||| |||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  4922 aaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 4823  T
Q  285 a 285  Q
    |    
T  4822 a 4822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 3343 - 3426
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||| | ||||| |||||||||| ||||||||   ||||| ||||||||||| |||| ||||||||||||||||||||    
T  3343 agtgtaattacaagtgtcagtgtcggacaagacacgtggtggacactgggacacgcctaatccgaggagtgtccgtgcttcata 3426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 8649 - 8719
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| |||| | |||||||||||||| ||||| |||| |||||| |||||||||||||||||||||||||    
T  8649 gtgtctgtgttgaacacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcata 8719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 71784 - 71854
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||| ||||||||| ||||| |||||||| || |||| ||||||||| ||||||||||    
T  71784 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcata 71854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 92875 - 92941
Alignment:
Q  220 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatat 286  Q
    ||||||||||||||||| |||| |||||  |||||||||| |||| |||||||||||||||||||||    
T  92875 ggtgtcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcatat 92941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 5058 - 4977
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||| | ||||||||||||||||||||||||||| ||||  | |||| |||| |||| ||||||||| ||||||||||    
T  5058 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcata 4977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 8635 - 8565
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||| |||||||||| ||||||| ||||| || |||||||| || | ||||||||||||||||||||    
T  8635 gtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcata 8565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 44593 - 44529
Alignment:
Q  158 ggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt 222  Q
    ||||| |||||||| ||||||  ||| ||||||||||| ||| ||||||||||||||||||||||    
T  44593 ggacaagctgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 53239 - 53303
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 279  Q
    |||||||||||||||| |||||||||| ||||| ||||||||  | ||||||| |||||||||||    
T  53239 gtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgc 53303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 90861 - 90961
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| | ||| |||||||||||||| ||||| |||| ||||| ||||||||| |||||    |||||||| |||||| ||||||  |||||||||    
T  90861 agaaaatcatataattcagtgtaattatatatgtcgatgtcagacacaacacgtgtccgacaccaaaacacgcctaatccaatgagtgtatgtgcttcat 90960  T
Q  285 a 285  Q
    |    
T  90961 a 90961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 3849 - 3779
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| ||||||||||||||||| |||| ||||  | ||||||||| |||| |||||||||| |||||||||    
T  3849 gtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcata 3779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 2987 - 3057
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||| || ||||||||||||||  ||||| || |||||||| |||| ||||||||||||||| ||||    
T  2987 gtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgctccata 3057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 9747 - 9678
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    |||| |||||| |||||||||| |||||||||  ||||||||  | |||| |||||||||||||||||||    
T  9747 gtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgcttcat 9678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 9788 - 9747
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||  ||| ||||||||||||||||||||||||||    
T  9788 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 9747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 17737 - 17844
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| |||||||||||| |||| ||||||   |||||| |||  ||||| ||||||||||| ||  | |||||||| |||||||||||||| |||    
T  17737 atgaagcacagatacggacacg-acac-ggacacc--gacacaactagttttttaagaaaatcacacaactcggtgtaattgtatgtgtcggtgtcagac 17832  T
Q  230 acgacacgtgtc 241  Q
    |||||| |||||    
T  17833 acgacatgtgtc 17844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 15045 - 15089
Alignment:
Q  241 ctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||    
T  15045 ctgacacggggacacgccttatccgaggagtgtttgtgcttcata 15089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 1683 - 1733
Alignment:
Q  206 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 256  Q
    |||||||| |||||||||||||||||||||| |||| |||||  |||||||    
T  1683 taattataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 1733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 13472 - 13542
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||||||| |  ||||  |||| || ||| |||| |||||||||||| |||||||    
T  13472 gtgtcggtgtcggacacgacacgtatacgacatcgggatacacctaatccgaggagtgtccgtacttcata 13542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 51785 - 51888
Alignment:
Q  140 gatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatg---tgtcggtgtcggacacgacac 236  Q
    ||||||||||||||||| | |||||| |||||||||||   ||| | ||||||||| ||| ||||||||||| | |   |||||||||| ||||||| ||    
T  51785 gatacggacacggacactg-acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttgtcggtgtcagacacgatac 51883  T
Q  237 gtgtc 241  Q
    |||||    
T  51884 gtgtc 51888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 24083 - 24154
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtct--gacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||| |||||||| |  ||||| || |||||||| |||| | ||||||||||||||||||    
T  24083 gtgtcggtgtcggacacaacacgtgtgtccgacactgg-acacgcctaatccgatgagtgtccgtgcttcata 24154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 135353 - 135312
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| | ||||||||||||||||||||||||    
T  135353 agaaaatcacataattctgtgtaattatatgtgtcggtgtcg 135312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 263372 - 263303
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||||||||||||||  || ||   ||||||||| |||| ||||||||||||| |||||    
T  263372 gtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University