View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3816_low_1 (Length: 630)

Name: NF3816_low_1
Description: NF3816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3816_low_1
NF3816_low_1
[»] chr1 (82 HSPs)
chr1 (250-612)||(48415340-48415702)
chr1 (146-290)||(10577671-10577814)
chr1 (19-129)||(4428599-4428709)
chr1 (130-286)||(25934574-25934746)
chr1 (19-123)||(4439828-4439932)
chr1 (130-289)||(46348320-46348478)
chr1 (146-286)||(41597410-41597549)
chr1 (179-286)||(30749852-30749959)
chr1 (179-286)||(30771303-30771410)
chr1 (187-286)||(37598852-37598950)
chr1 (179-285)||(12918957-12919063)
chr1 (159-284)||(42359391-42359516)
chr1 (148-288)||(22515825-22515964)
chr1 (214-286)||(32461393-32461465)
chr1 (130-286)||(51409983-51410144)
chr1 (187-286)||(18337349-18337448)
chr1 (159-284)||(1486646-1486776)
chr1 (187-286)||(5898206-5898305)
chr1 (130-286)||(36878419-36878585)
chr1 (215-289)||(47989556-47989630)
chr1 (159-284)||(29163323-29163448)
chr1 (19-107)||(18991172-18991260)
chr1 (159-286)||(1815249-1815376)
chr1 (185-272)||(40181889-40181976)
chr1 (187-285)||(40258874-40258972)
chr1 (215-286)||(40917808-40917879)
chr1 (187-286)||(52903269-52903365)
chr1 (159-286)||(2896061-2896188)
chr1 (215-286)||(9828103-9828174)
chr1 (185-286)||(27965940-27966039)
chr1 (221-286)||(31015091-31015156)
chr1 (181-282)||(39130711-39130812)
chr1 (223-286)||(6427531-6427594)
chr1 (167-286)||(38078601-38078720)
chr1 (187-284)||(16297223-16297322)
chr1 (167-285)||(45534131-45534248)
chr1 (185-286)||(7918154-7918252)
chr1 (219-288)||(18556383-18556452)
chr1 (185-286)||(34712323-34712424)
chr1 (144-285)||(6414932-6415082)
chr1 (187-287)||(18190047-18190147)
chr1 (214-286)||(36906055-36906126)
chr1 (185-232)||(1864874-1864921)
chr1 (185-286)||(9690213-9690313)
chr1 (215-281)||(9629834-9629900)
chr1 (187-241)||(13997903-13997957)
chr1 (237-291)||(15765828-15765882)
chr1 (215-285)||(21032265-21032335)
chr1 (181-231)||(39953141-39953191)
chr1 (185-289)||(11412704-11412809)
chr1 (185-234)||(14332634-14332683)
chr1 (185-226)||(34371731-34371772)
chr1 (185-226)||(44482248-44482289)
chr1 (243-287)||(6574053-6574097)
chr1 (188-232)||(13436479-13436523)
chr1 (215-286)||(34741894-34741965)
chr1 (235-286)||(1704935-1704986)
chr1 (215-286)||(5944342-5944413)
chr1 (215-274)||(6612112-6612171)
chr1 (185-232)||(9709838-9709885)
chr1 (186-237)||(17705576-17705626)
chr1 (215-286)||(31694639-31694710)
chr1 (167-222)||(34315712-34315767)
chr1 (249-288)||(35702540-35702579)
chr1 (185-264)||(43492456-43492535)
chr1 (204-274)||(8842666-8842736)
chr1 (244-290)||(9630557-9630603)
chr1 (130-164)||(10577814-10577848)
chr1 (157-231)||(12443456-12443529)
chr1 (206-256)||(21530728-21530778)
chr1 (187-281)||(26830608-26830701)
chr1 (130-164)||(38078735-38078769)
chr1 (185-226)||(20157350-20157391)
chr1 (187-236)||(22881606-22881655)
chr1 (157-226)||(24577186-24577255)
chr1 (185-226)||(25361904-25361945)
chr1 (214-286)||(32899937-32900010)
chr1 (188-288)||(38075907-38076008)
chr1 (130-163)||(48548042-48548075)
chr1 (245-285)||(10572535-10572575)
chr1 (215-286)||(17831462-17831534)
chr1 (250-286)||(22947813-22947849)
[»] chr3 (81 HSPs)
chr3 (130-286)||(13845465-13845612)
chr3 (159-290)||(35222930-35223061)
chr3 (184-267)||(2941575-2941658)
chr3 (187-286)||(40993275-40993374)
chr3 (19-129)||(9494846-9494956)
chr3 (130-226)||(14027961-14028066)
chr3 (130-286)||(20503430-20503584)
chr3 (187-286)||(55401095-55401194)
chr3 (187-284)||(28918021-28918120)
chr3 (185-285)||(8789489-8789591)
chr3 (21-119)||(41985598-41985696)
chr3 (187-286)||(10954972-10955074)
chr3 (187-286)||(18426969-18427068)
chr3 (157-286)||(27505236-27505370)
chr3 (215-286)||(41961579-41961650)
chr3 (19-129)||(9407334-9407444)
chr3 (215-289)||(25064966-25065040)
chr3 (215-284)||(4987222-4987291)
chr3 (46-123)||(41980849-41980926)
chr3 (191-279)||(3631708-3631796)
chr3 (19-111)||(9617519-9617611)
chr3 (202-285)||(15864868-15864950)
chr3 (185-288)||(4466538-4466641)
chr3 (203-286)||(7171537-7171620)
chr3 (52-122)||(9336541-9336611)
chr3 (185-286)||(11251996-11252095)
chr3 (215-293)||(14209172-14209250)
chr3 (185-247)||(25093520-25093582)
chr3 (222-288)||(34185050-34185116)
chr3 (20-129)||(9425542-9425651)
chr3 (228-285)||(15999951-16000008)
chr3 (186-286)||(8842348-8842448)
chr3 (185-284)||(24204983-24205082)
chr3 (189-284)||(25775531-25775624)
chr3 (146-286)||(26492145-26492284)
chr3 (187-284)||(29508464-29508567)
chr3 (34-129)||(9655395-9655490)
chr3 (24-111)||(9695672-9695759)
chr3 (133-285)||(24633343-24633498)
chr3 (29-111)||(9343823-9343905)
chr3 (165-287)||(51206292-51206414)
chr3 (187-232)||(7928470-7928515)
chr3 (52-108)||(9329837-9329893)
chr3 (167-231)||(13414469-13414533)
chr3 (221-285)||(14216957-14217021)
chr3 (221-285)||(14223086-14223150)
chr3 (243-294)||(4990904-4990955)
chr3 (34-129)||(9646402-9646497)
chr3 (215-286)||(15796223-15796294)
chr3 (19-129)||(9397753-9397863)
chr3 (216-285)||(37077418-37077488)
chr3 (185-247)||(45451571-45451633)
chr3 (134-232)||(49505148-49505245)
chr3 (159-232)||(8383249-8383322)
chr3 (201-241)||(6780404-6780444)
chr3 (63-111)||(9352913-9352961)
chr3 (19-111)||(9377054-9377146)
chr3 (59-111)||(9448322-9448374)
chr3 (221-285)||(10690193-10690257)
chr3 (187-282)||(11665964-11666070)
chr3 (215-259)||(14832158-14832202)
chr3 (187-247)||(20389636-20389694)
chr3 (214-286)||(55213020-55213092)
chr3 (185-285)||(32804485-32804581)
chr3 (235-286)||(40052380-40052431)
chr3 (130-164)||(750698-750732)
chr3 (19-129)||(9416541-9416651)
chr3 (186-232)||(11507469-11507515)
chr3 (181-227)||(38731232-38731278)
chr3 (185-246)||(7614396-7614456)
chr3 (130-163)||(17568750-17568783)
chr3 (214-286)||(25074841-25074914)
chr3 (214-286)||(27903684-27903757)
chr3 (225-286)||(49651716-49651777)
chr3 (237-285)||(1389908-1389956)
chr3 (215-287)||(8039763-8039835)
chr3 (19-75)||(9402347-9402403)
chr3 (19-75)||(9420586-9420642)
chr3 (242-286)||(14979224-14979268)
chr3 (159-223)||(26508102-26508166)
chr3 (215-286)||(52369834-52369906)
[»] chr2 (63 HSPs)
chr2 (143-286)||(24009274-24009414)
chr2 (159-286)||(20242667-20242794)
chr2 (157-287)||(36096303-36096444)
chr2 (19-123)||(20694345-20694449)
chr2 (130-289)||(41843405-41843568)
chr2 (162-284)||(2438661-2438783)
chr2 (130-286)||(37558941-37559096)
chr2 (201-290)||(28596503-28596592)
chr2 (146-286)||(34784911-34785061)
chr2 (159-288)||(18840951-18841080)
chr2 (130-287)||(38117098-38117260)
chr2 (216-286)||(26769571-26769641)
chr2 (204-286)||(34993922-34994004)
chr2 (187-278)||(5040754-5040845)
chr2 (188-267)||(5367213-5367292)
chr2 (187-286)||(15972893-15972992)
chr2 (215-286)||(30717459-30717530)
chr2 (215-286)||(35056927-35056998)
chr2 (215-286)||(37419802-37419873)
chr2 (187-273)||(12224243-12224329)
chr2 (185-282)||(37411188-37411285)
chr2 (230-286)||(18054716-18054772)
chr2 (216-284)||(19942314-19942382)
chr2 (220-286)||(11223793-11223858)
chr2 (146-226)||(18054803-18054883)
chr2 (221-286)||(42511322-42511387)
chr2 (215-286)||(32749754-32749825)
chr2 (179-232)||(20922922-20922975)
chr2 (216-286)||(27084318-27084388)
chr2 (201-286)||(34006930-34007016)
chr2 (159-279)||(21624258-21624374)
chr2 (187-232)||(34691799-34691844)
chr2 (187-232)||(34714211-34714256)
chr2 (146-218)||(21616742-21616813)
chr2 (215-286)||(22084756-22084830)
chr2 (187-247)||(30404829-30404889)
chr2 (168-260)||(43585971-43586063)
chr2 (159-226)||(15909632-15909699)
chr2 (250-285)||(18255945-18255980)
chr2 (215-285)||(23354582-23354652)
chr2 (187-266)||(31808097-31808176)
chr2 (159-225)||(11223864-11223930)
chr2 (222-284)||(15657930-15657992)
chr2 (130-164)||(21374773-21374807)
chr2 (215-284)||(23354926-23354995)
chr2 (130-164)||(26769463-26769497)
chr2 (191-273)||(29176446-29176528)
chr2 (215-285)||(44860379-44860449)
chr2 (146-287)||(6940235-6940375)
chr2 (237-286)||(10535685-10535734)
chr2 (187-232)||(19536391-19536436)
chr2 (214-287)||(21782743-21782816)
chr2 (160-236)||(31284041-31284118)
chr2 (185-226)||(44860338-44860379)
chr2 (222-274)||(14996171-14996222)
chr2 (185-225)||(18889592-18889632)
chr2 (130-162)||(27447082-27447114)
chr2 (160-220)||(28524419-28524479)
chr2 (187-286)||(28677929-28678033)
chr2 (130-162)||(31283994-31284026)
chr2 (185-225)||(38355888-38355928)
chr2 (202-242)||(40361738-40361778)
chr2 (221-288)||(41849354-41849422)
[»] chr8 (58 HSPs)
chr8 (146-285)||(43737752-43737892)
chr8 (167-291)||(3951471-3951596)
chr8 (146-287)||(34450960-34451116)
chr8 (130-286)||(36450694-36450849)
chr8 (185-284)||(3025569-3025668)
chr8 (185-286)||(33405324-33405425)
chr8 (201-284)||(926730-926813)
chr8 (184-286)||(26902104-26902217)
chr8 (130-286)||(14134663-14134818)
chr8 (185-284)||(20679337-20679436)
chr8 (130-281)||(31109463-31109613)
chr8 (185-283)||(40332209-40332307)
chr8 (216-285)||(29447040-29447109)
chr8 (143-282)||(5813569-5813707)
chr8 (215-286)||(22652035-22652106)
chr8 (215-286)||(29510233-29510304)
chr8 (185-289)||(37283752-37283851)
chr8 (185-287)||(4786277-4786379)
chr8 (221-292)||(16641903-16641974)
chr8 (187-286)||(18407739-18407838)
chr8 (187-286)||(31557016-31557115)
chr8 (204-278)||(126295-126369)
chr8 (174-286)||(18964184-18964309)
chr8 (215-286)||(15816058-15816129)
chr8 (157-231)||(13844591-13844665)
chr8 (221-286)||(8343381-8343446)
chr8 (222-286)||(6065586-6065650)
chr8 (157-233)||(31236570-31236646)
chr8 (214-289)||(11803317-11803392)
chr8 (215-286)||(21465471-21465542)
chr8 (214-285)||(24205749-24205820)
chr8 (215-286)||(28745557-28745628)
chr8 (215-286)||(29447503-29447574)
chr8 (180-286)||(24413499-24413605)
chr8 (185-231)||(34897103-34897149)
chr8 (202-286)||(39820464-39820547)
chr8 (222-286)||(4673354-4673418)
chr8 (201-273)||(8293859-8293931)
chr8 (212-287)||(17751700-17751776)
chr8 (212-287)||(17760687-17760763)
chr8 (226-274)||(22943301-22943349)
chr8 (187-226)||(11927086-11927125)
chr8 (243-286)||(13436910-13436953)
chr8 (130-241)||(22595952-22596068)
chr8 (185-256)||(38079017-38079088)
chr8 (187-233)||(4948672-4948718)
chr8 (188-226)||(8847277-8847315)
chr8 (187-241)||(20873089-20873143)
chr8 (215-261)||(26915200-26915246)
chr8 (221-286)||(22197671-22197736)
chr8 (250-286)||(9383049-9383085)
chr8 (189-241)||(9414860-9414912)
chr8 (249-285)||(13009423-13009459)
chr8 (238-286)||(13397622-13397670)
chr8 (179-231)||(28747430-28747482)
chr8 (250-286)||(34127172-34127208)
chr8 (206-270)||(44462151-44462215)
chr8 (206-270)||(44469684-44469748)
[»] chr5 (61 HSPs)
chr5 (146-285)||(6401478-6401627)
chr5 (159-288)||(30098976-30099105)
chr5 (158-287)||(21814252-21814392)
chr5 (187-286)||(21576685-21576784)
chr5 (182-286)||(42029767-42029871)
chr5 (185-284)||(30502330-30502429)
chr5 (185-284)||(30542673-30542772)
chr5 (146-284)||(21190998-21191135)
chr5 (130-225)||(32426870-32426965)
chr5 (187-286)||(43564901-43565000)
chr5 (185-286)||(28588614-28588715)
chr5 (167-283)||(19452998-19453125)
chr5 (185-289)||(17123066-17123169)
chr5 (211-283)||(39268541-39268613)
chr5 (215-286)||(21522809-21522880)
chr5 (215-286)||(21533375-21533446)
chr5 (167-222)||(39758272-39758327)
chr5 (215-285)||(21542089-21542159)
chr5 (185-286)||(21194063-21194164)
chr5 (157-286)||(42893350-42893479)
chr5 (201-273)||(26312803-26312875)
chr5 (159-286)||(31084315-31084447)
chr5 (215-287)||(39698600-39698672)
chr5 (185-286)||(14873535-14873641)
chr5 (185-284)||(18421779-18421882)
chr5 (221-290)||(30098391-30098460)
chr5 (185-284)||(23015926-23016030)
chr5 (221-284)||(43001859-43001922)
chr5 (204-254)||(23012380-23012430)
chr5 (185-286)||(27932253-27932354)
chr5 (190-282)||(4105282-4105374)
chr5 (215-283)||(18592132-18592200)
chr5 (215-286)||(7677764-7677835)
chr5 (215-274)||(15382533-15382592)
chr5 (159-286)||(32630675-32630802)
chr5 (185-226)||(3966521-3966562)
chr5 (146-286)||(6770523-6770655)
chr5 (187-236)||(15884008-15884057)
chr5 (214-287)||(16304365-16304438)
chr5 (215-284)||(19579760-19579829)
chr5 (185-236)||(16203785-16203836)
chr5 (235-286)||(23289998-23290049)
chr5 (215-286)||(32766872-32766943)
chr5 (157-232)||(34879340-34879415)
chr5 (187-226)||(37328844-37328883)
chr5 (237-284)||(41995534-41995581)
chr5 (215-285)||(3966562-3966632)
chr5 (187-237)||(6247642-6247692)
chr5 (130-164)||(15382423-15382457)
chr5 (222-286)||(19820328-19820389)
chr5 (226-284)||(24238603-24238661)
chr5 (249-287)||(35017125-35017163)
chr5 (220-282)||(36642696-36642757)
chr5 (185-226)||(6471889-6471930)
chr5 (221-286)||(40000493-40000558)
chr5 (185-226)||(41091257-41091298)
chr5 (250-286)||(10298633-10298669)
chr5 (234-278)||(17088358-17088402)
chr5 (250-286)||(22423764-22423800)
chr5 (203-286)||(39205916-39206004)
chr5 (222-286)||(40131687-40131751)
[»] chr4 (67 HSPs)
chr4 (146-287)||(5414100-5414251)
chr4 (159-287)||(23292925-23293053)
chr4 (179-286)||(19097835-19097941)
chr4 (159-286)||(49431017-49431145)
chr4 (187-288)||(28964186-28964287)
chr4 (185-287)||(8423657-8423759)
chr4 (215-285)||(30982808-30982878)
chr4 (167-287)||(46083919-46084050)
chr4 (203-286)||(12895214-12895297)
chr4 (187-286)||(34306744-34306843)
chr4 (187-286)||(715545-715646)
chr4 (187-286)||(752871-752972)
chr4 (215-285)||(12323968-12324038)
chr4 (216-286)||(24613630-24613700)
chr4 (187-296)||(12797268-12797377)
chr4 (187-288)||(35157923-35158024)
chr4 (185-286)||(35161054-35161155)
chr4 (202-286)||(2361915-2361999)
chr4 (187-286)||(16073414-16073513)
chr4 (185-286)||(36635342-36635449)
chr4 (162-241)||(54580008-54580087)
chr4 (221-285)||(3947702-3947766)
chr4 (215-286)||(19482727-19482798)
chr4 (215-286)||(19500787-19500858)
chr4 (220-285)||(848015-848080)
chr4 (187-256)||(29205464-29205533)
chr4 (187-244)||(36509074-36509131)
chr4 (187-236)||(40179626-40179675)
chr4 (186-286)||(4672025-4672125)
chr4 (226-286)||(29205527-29205587)
chr4 (215-286)||(53381530-53381602)
chr4 (167-274)||(21945503-21945610)
chr4 (232-283)||(28084589-28084640)
chr4 (223-286)||(32273461-32273524)
chr4 (187-286)||(42640549-42640643)
chr4 (195-285)||(20950368-20950458)
chr4 (159-221)||(40613442-40613504)
chr4 (187-284)||(4157169-4157266)
chr4 (187-284)||(4157456-4157553)
chr4 (225-286)||(18966567-18966628)
chr4 (130-226)||(30298910-30299006)
chr4 (130-226)||(30327778-30327874)
chr4 (146-226)||(13783261-13783340)
chr4 (221-285)||(14465006-14465070)
chr4 (210-286)||(23861369-23861445)
chr4 (215-286)||(24343560-24343632)
chr4 (185-236)||(10499260-10499311)
chr4 (168-231)||(16189710-16189773)
chr4 (215-286)||(22234819-22234890)
chr4 (179-226)||(44132644-44132691)
chr4 (218-288)||(903984-904054)
chr4 (228-286)||(3064868-3064926)
chr4 (185-247)||(8402721-8402783)
chr4 (185-247)||(9996858-9996920)
chr4 (130-164)||(23293065-23293099)
chr4 (185-287)||(30103296-30103397)
chr4 (215-281)||(30838269-30838335)
chr4 (249-286)||(5775304-5775341)
chr4 (159-232)||(6879459-6879532)
chr4 (130-226)||(12895116-12895210)
chr4 (235-284)||(22440559-22440608)
chr4 (174-230)||(42014965-42015022)
chr4 (185-225)||(5775359-5775399)
chr4 (175-247)||(13307885-13307957)
chr4 (215-287)||(15724482-15724554)
chr4 (143-226)||(22234890-22234973)
chr4 (242-286)||(40784028-40784072)
[»] chr6 (70 HSPs)
chr6 (159-286)||(18367828-18367966)
chr6 (158-287)||(16488518-16488658)
chr6 (146-286)||(13789134-13789273)
chr6 (146-286)||(13797753-13797892)
chr6 (130-285)||(17841530-17841684)
chr6 (187-286)||(34595154-34595253)
chr6 (130-287)||(28152063-28152218)
chr6 (146-285)||(9658859-9658998)
chr6 (162-286)||(17327590-17327719)
chr6 (157-283)||(32978842-32978969)
chr6 (185-283)||(7996325-7996419)
chr6 (185-283)||(8022382-8022476)
chr6 (167-286)||(7377979-7378098)
chr6 (221-284)||(12696383-12696446)
chr6 (187-286)||(33001229-33001328)
chr6 (134-236)||(5626686-5626792)
chr6 (185-284)||(7265535-7265634)
chr6 (215-286)||(8365448-8365519)
chr6 (215-286)||(10339054-10339125)
chr6 (185-288)||(13360311-13360413)
chr6 (187-286)||(28715315-28715414)
chr6 (185-288)||(32511604-32511707)
chr6 (146-286)||(8776908-8777052)
chr6 (206-286)||(4877982-4878061)
chr6 (221-285)||(31384984-31385048)
chr6 (215-286)||(16766756-16766827)
chr6 (185-286)||(13364645-13364746)
chr6 (159-236)||(19040344-19040421)
chr6 (186-238)||(7740660-7740712)
chr6 (170-286)||(4388088-4388199)
chr6 (159-286)||(7977770-7977897)
chr6 (204-243)||(30851637-30851676)
chr6 (187-288)||(24645501-24645602)
chr6 (157-226)||(26562679-26562748)
chr6 (215-287)||(34446618-34446691)
chr6 (21-129)||(7041466-7041574)
chr6 (215-287)||(7248417-7248489)
chr6 (215-286)||(9107299-9107370)
chr6 (185-226)||(9025494-9025535)
chr6 (221-290)||(9629448-9629517)
chr6 (130-286)||(16833267-16833427)
chr6 (185-241)||(31579212-31579266)
chr6 (132-164)||(4118412-4118444)
chr6 (202-286)||(6898221-6898305)
chr6 (250-286)||(10649371-10649407)
chr6 (187-274)||(853811-853898)
chr6 (215-286)||(3209447-3209518)
chr6 (185-232)||(5732504-5732551)
chr6 (187-226)||(7027262-7027301)
chr6 (215-286)||(8714039-8714110)
chr6 (130-164)||(7938062-7938096)
chr6 (160-226)||(8931602-8931668)
chr6 (160-226)||(9107370-9107436)
chr6 (185-227)||(9629401-9629443)
chr6 (201-231)||(21924930-21924960)
chr6 (231-285)||(31959214-31959268)
chr6 (21-82)||(7012784-7012845)
chr6 (88-129)||(7029850-7029891)
chr6 (237-286)||(7938170-7938219)
chr6 (185-283)||(8389411-8389513)
chr6 (88-129)||(9159533-9159574)
chr6 (88-129)||(9170854-9170895)
chr6 (185-226)||(9617452-9617493)
chr6 (187-240)||(29020932-29020985)
chr6 (167-247)||(1191679-1191759)
chr6 (187-231)||(1700372-1700416)
chr6 (130-162)||(5970183-5970215)
chr6 (146-226)||(9027158-9027237)
chr6 (214-266)||(9522949-9523001)
chr6 (221-281)||(24138485-24138545)
[»] chr7 (61 HSPs)
chr7 (179-286)||(18212973-18213080)
chr7 (174-283)||(39138451-39138560)
chr7 (130-286)||(15680773-15680928)
chr7 (185-285)||(32287404-32287504)
chr7 (130-286)||(9778454-9778624)
chr7 (185-286)||(21880170-21880271)
chr7 (159-286)||(5409771-5409903)
chr7 (185-285)||(20549809-20549909)
chr7 (204-286)||(598245-598327)
chr7 (187-286)||(43027404-43027508)
chr7 (215-286)||(24339701-24339772)
chr7 (202-286)||(21864843-21864927)
chr7 (221-288)||(32093952-32094020)
chr7 (218-287)||(25822717-25822786)
chr7 (185-257)||(5835265-5835337)
chr7 (185-236)||(9482952-9483003)
chr7 (185-275)||(12278853-12278943)
chr7 (187-274)||(26733324-26733411)
chr7 (191-286)||(33994236-33994331)
chr7 (159-285)||(22484017-22484143)
chr7 (203-286)||(1433490-1433578)
chr7 (181-285)||(18035806-18035909)
chr7 (214-288)||(7133210-7133285)
chr7 (156-286)||(21568561-21568692)
chr7 (159-286)||(25481894-25482021)
chr7 (187-278)||(41020516-41020607)
chr7 (185-286)||(1401043-1401142)
chr7 (216-286)||(7438766-7438836)
chr7 (185-275)||(27093364-27093454)
chr7 (185-275)||(27184847-27184937)
chr7 (228-286)||(29763129-29763187)
chr7 (181-234)||(19213817-19213870)
chr7 (185-226)||(22602710-22602751)
chr7 (201-286)||(24105712-24105797)
chr7 (188-236)||(640134-640182)
chr7 (237-289)||(6490786-6490838)
chr7 (243-283)||(8842282-8842322)
chr7 (221-281)||(13770750-13770810)
chr7 (223-287)||(17852056-17852120)
chr7 (130-226)||(25791617-25791711)
chr7 (185-232)||(3721111-3721158)
chr7 (218-285)||(4794951-4795018)
chr7 (187-266)||(8234166-8234245)
chr7 (218-289)||(11831494-11831565)
chr7 (181-224)||(17851445-17851488)
chr7 (243-286)||(35862027-35862070)
chr7 (232-291)||(40287297-40287356)
chr7 (221-287)||(2334314-2334380)
chr7 (167-212)||(1656676-1656721)
chr7 (204-285)||(3554447-3554528)
chr7 (201-286)||(11738151-11738236)
chr7 (181-230)||(24146830-24146879)
chr7 (215-284)||(26033392-26033461)
chr7 (237-286)||(28155624-28155673)
chr7 (208-277)||(41918906-41918975)
chr7 (250-286)||(5307339-5307375)
chr7 (215-247)||(9933332-9933364)
chr7 (201-285)||(10359633-10359717)
chr7 (234-286)||(14729770-14729822)
chr7 (221-285)||(20545185-20545249)
chr7 (130-226)||(32308084-32308179)
[»] scaffold0623 (1 HSPs)
scaffold0623 (159-285)||(5926-6063)
[»] scaffold0652 (1 HSPs)
scaffold0652 (187-285)||(403-501)
[»] scaffold0361 (1 HSPs)
scaffold0361 (143-286)||(14506-14646)
[»] scaffold0116 (1 HSPs)
scaffold0116 (146-226)||(9878-9957)
[»] scaffold0306 (1 HSPs)
scaffold0306 (215-284)||(13454-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (215-284)||(21804-21873)
[»] scaffold0083 (1 HSPs)
scaffold0083 (201-286)||(45470-45555)
[»] scaffold0053 (1 HSPs)
scaffold0053 (202-286)||(8833-8917)
[»] scaffold0050 (1 HSPs)
scaffold0050 (187-283)||(70298-70394)
[»] scaffold0003 (1 HSPs)
scaffold0003 (215-286)||(241653-241724)
[»] scaffold0793 (1 HSPs)
scaffold0793 (187-286)||(4821-4922)
[»] scaffold0475 (1 HSPs)
scaffold0475 (202-286)||(3343-3427)
[»] scaffold0380 (1 HSPs)
scaffold0380 (215-286)||(8649-8720)
[»] scaffold0019 (1 HSPs)
scaffold0019 (215-286)||(71784-71855)
[»] scaffold0512 (1 HSPs)
scaffold0512 (204-286)||(4976-5058)
[»] scaffold0004 (1 HSPs)
scaffold0004 (220-285)||(92875-92940)
[»] scaffold0450 (1 HSPs)
scaffold0450 (215-286)||(8564-8635)
[»] scaffold0022 (1 HSPs)
scaffold0022 (185-287)||(90861-90963)
[»] scaffold0123 (1 HSPs)
scaffold0123 (158-222)||(44529-44593)
[»] scaffold0044 (1 HSPs)
scaffold0044 (215-279)||(53239-53303)
[»] scaffold0136 (1 HSPs)
scaffold0136 (215-286)||(3778-3849)
[»] scaffold0086 (1 HSPs)
scaffold0086 (215-286)||(2987-3058)
[»] scaffold0227 (1 HSPs)
scaffold0227 (241-286)||(15045-15090)
[»] scaffold0036 (2 HSPs)
scaffold0036 (215-284)||(9678-9747)
scaffold0036 (185-226)||(9747-9788)
[»] scaffold0279 (1 HSPs)
scaffold0279 (130-241)||(17737-17844)
[»] scaffold0154 (1 HSPs)
scaffold0154 (215-286)||(13472-13543)
[»] scaffold0697 (1 HSPs)
scaffold0697 (206-256)||(1683-1733)
[»] scaffold0103 (1 HSPs)
scaffold0103 (140-241)||(51785-51888)
[»] scaffold0057 (1 HSPs)
scaffold0057 (215-286)||(24083-24155)
[»] scaffold0027 (1 HSPs)
scaffold0027 (251-289)||(46741-46779)
[»] scaffold0020 (1 HSPs)
scaffold0020 (185-226)||(135312-135353)
[»] scaffold0008 (1 HSPs)
scaffold0008 (215-284)||(263303-263372)


Alignment Details
Target: chr1 (Bit Score: 347; Significance: 0; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 250 - 612
Target Start/End: Complemental strand, 48415702 - 48415340
Alignment:
Q  250 ggacacgccttatccaaggagtgtccgtgcttcatagtttaggactttgttttgtttatgtttctatgttgagtcgaggcataatgcttttaatgtcaag 349  Q
    |||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48415702 ggacacgcctaatccaaggagtgtccgtgcttcatatttcaggactttgttttgtttatgtttctatgttgagtcgaggcataatgcttttaatgtcaag 48415603  T
Q  350 cattgtttattagcaccaacccacccataaaccaaaaatggcttactgatgtagaagttaatgaaagtggtagttaatagctatagctatatattgaaga 449  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48415602 cattgtttattagcaccaacccacccataaaccaaaaatggcttactgatgtagaagttaatgaaagtggtagttaatagctatagctatatattgaaga 48415503  T
Q  450 cacacaaacaatgacatgatcaatactgcaaatatataaaatttgactaacaaagaatatgaaccaatttcatttatataatgattgtattatacagttt 549  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48415502 cacacaaacaatgacatgatcaatactgcaaatatagaaaatttgactaacaaagaatatgaaccaatttcatttatataatgattgtattatacagttt 48415403  T
Q  550 atgtggtgataccacattaacatgcctttagagcataagcacgaacaccaacatgcatgaact 612  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48415402 atgtggtgataccacattaacatgcctttagagcataagcacgaacaccaacatgcatgaact 48415340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 146 - 290
Target Start/End: Complemental strand, 10577814 - 10577671
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||    
T  10577814 gacacggacaccg-acacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcgggggcggacacgacgcgtgtctgac 10577716  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcatagttta 290  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  10577715 acggggacacgccttatccaaggagtgtccgtgcttcatacttta 10577671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 4428599 - 4428709
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4428599 aataaagatgacacaattccctttagtaacagacaactcagaagcagaggcagaaaacaaacatccattccccaaaaacaaaaccctatcccccaaactc 4428698  T
Q  119 gtcaatttcac 129  Q
    |||||||||||    
T  4428699 gtcaatttcac 4428709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 130 - 286
Target Start/End: Original strand, 25934574 - 25934746
Alignment:
Q  130 atgaagcactgatacggacacggacaccggaca-----cgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgt------ 218  Q
    ||||||||| |||||||||||||||||||||||     ||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||          
T  25934574 atgaagcacggatacggacacggacaccggacatgacacgccgacacagctaaattttctagaaaatcacaaaatacagtgtaattatatgtgtcggtat 25934673  T
Q  219 -----cggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
         |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25934674 cgtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcatag 25934746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 4439828 - 4439932
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    |||||||||||||| ||||||||||| |||| |||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4439828 aataaagatgacacaattccctttagaaacacacaaatccgaagcagaagcagaaaacgaacatccattccccaaaaacaaaaccctatctcccaaactc 4439927  T
Q  119 gtcaa 123  Q
     ||||    
T  4439928 atcaa 4439932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 130 - 289
Target Start/End: Complemental strand, 46348478 - 46348320
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| ||||||||||||||||| | |||||| |||||||||||   ||| | ||||||| | |||  |||||||||| | |||||||||||||||    
T  46348478 atgaagcacggatacggacacggacactg-acacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggac 46348380  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagttt 289  Q
    |||||||||||| ||||| | ||||||||| |||| ||| ||||||||||||||||||||    
T  46348379 acgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatagttt 46348320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 146 - 286
Target Start/End: Complemental strand, 41597549 - 41597410
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgca-gtgtaattatatgtgtcggtgtcggacacgacacgtgtctga 244  Q
    ||||||||||||| ||||||  ||||||||||||||| ||||||||||||||||  | ||||   | | |||||| ||||||||||||||||||||||||    
T  41597549 gacacggacaccg-acacgccaacacagctaaattttctagaaaatcacaaaatatatgtgttggtgt-tgtgtccgtgtcggacacgacacgtgtctga 41597452  T
Q  245 cacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||| |||| |||||||||||||||| |||||||||||    
T  41597451 cacggggatacgctttatccaaggagtgtctgtgcttcatag 41597410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 30749852 - 30749959
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||| |||| ||||||| ||| |||| |||| | |||||||||| ||    
T  30749852 ttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgtttgacacgaggatacgcattattcgaggagtgtccatg 30749951  T
Q  279 cttcatag 286  Q
    ||||||||    
T  30749952 cttcatag 30749959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 30771303 - 30771410
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||| |||| ||||||| ||| |||| |||| | |||||||||| ||    
T  30771303 ttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgtttgacacgaggatacgcattattcgaggagtgtccatg 30771402  T
Q  279 cttcatag 286  Q
    ||||||||    
T  30771403 cttcatag 30771410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 37598852 - 37598950
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||| |||| |||||||||||||||||||||    
T  37598852 aaaatcacaaatt-cagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 12918957 - 12919063
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||| ||||||| ||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| || ||||| ||||    
T  12918957 ttttttagacaatcacataattcaatgtgattatatgtgttggtatcggacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtg 12919056  T
Q  279 cttcata 285  Q
    |||||||    
T  12919057 cttcata 12919063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 42359516 - 42359391
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    |||||||||||||| ||||   ||| | ||||||||||||| ||||||||||| | |||||||||||||||| |||  ||||| ||||| ||||||||||    
T  42359516 gacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcc 42359417  T
Q  259 ttatccaaggagtgtccgtgcttcat 284  Q
    | |||| |||||||||||||||||||    
T  42359416 taatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 148 - 288
Target Start/End: Complemental strand, 22515964 - 22515825
Alignment:
Q  148 cacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||| |||||||| |||||||||||   ||| | ||||||||| |||  |||||||||| | |||||||||||||||||||||| | || |||||    
T  22515964 cacggacac-ggacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacac 22515866  T
Q  248 ggggacacgccttatccaaggagtgtccgtgcttcatagtt 288  Q
     | ||||||||| |||| |||||||||||||||||||||||    
T  22515865 cgagacacgcctaatccgaggagtgtccgtgcttcatagtt 22515825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 32461465 - 32461393
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  32461465 tgtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 130 - 286
Target Start/End: Original strand, 51409983 - 51410144
Alignment:
Q  130 atgaagcactgatacggacacggacac----cggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 224  Q
    ||||||||| |||||||||||||||||    |||||| || |||||| |||| | |||  | ||||||||| ||| ||||||||||| | ||||||||||    
T  51409983 atgaagcacggatacggacacggacacaaaacggacatgccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgt 51410082  T
Q  225 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||| || ||||| | ||||||||| ||||||||||| | ||||||||||||    
T  51410083 cggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcatag 51410144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 18337349 - 18337448
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||| ||||||||| ||||| |||||| |||| |||| |||||||||||||||||||||    
T  18337349 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 1486776 - 1486646
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggggac 253  Q
    |||||||||||||||||||   ||| | ||||||||| ||| ||||||||||||| ||||||||||||     ||||||||||||||| ||||| |||||    
T  1486776 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggac 1486677  T
Q  254 acgccttatccaaggagtgtccgtgcttcat 284  Q
    |||||| |||| ||||||||| |||||||||    
T  1486676 acgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 5898305 - 5898206
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| ||| ||||||||||||||| ||||||||| |||||||||||||||  |||| |||||||| || |||| |||||||||||||||| ||||    
T  5898305 aaaatcacataattcagtgtaattatatgcgtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctttatag 5898206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 130 - 286
Target Start/End: Original strand, 36878419 - 36878585
Alignment:
Q  130 atgaagcactgatacggacacggacaccg-----gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 224  Q
    ||||||||| ||||||||||||||||  |     ||||||| ||||| |||||   ||| ||||||||||| ||| ||||||||||||| ||||||||||    
T  36878419 atgaagcacggatacggacacggacatagacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 36878518  T
Q  225 cggacacgacacgtgtc-----tgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    | ||||||| || ||||      ||||||||||||||||| |||| |||||||||||||||||||||    
T  36878519 ctgacacgaaacatgtccgacacgacacggggacacgcctaatcccaggagtgtccgtgcttcatag 36878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 47989556 - 47989630
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagttt 289  Q
    |||||||||||||||||||||| |||||||||  ||||||||||| |||| ||||||||||||||||||||||||    
T  47989556 gtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatagttt 47989630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 29163448 - 29163323
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| ||||| ||||||  |||  |||||||||| ||| || | |||||||||||||||||||||||||||||||||| ||||||| |||||||| |    
T  29163448 gacacgccgacaccgctaaaaatttaggaaaatcacataattcaatttaattatatgtgtcggtgtcggacacgacacgtgcctgacaccgggacacggc 29163349  T
Q  259 ttatccaaggagtgtccgtgcttcat 284  Q
    | |||  || ||||| ||||||||||    
T  29163348 taatcagagaagtgttcgtgcttcat 29163323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 18991172 - 18991260
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctat 107  Q
    |||||||| ||||| |||||||||   |||||| || ||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  18991172 aataaagacgacacaattccctttgacaacagataaatcagaagcagaagcagaaaacgaacatccattccccaagaacaaaaccctat 18991260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 159 - 286
Target Start/End: Original strand, 1815249 - 1815376
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| ||||||  ||| | ||||| ||||||||| ||| ||||||||||| | ||||||||||| |||||||||| |||| ||||| ||||||||||    
T  1815249 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcc 1815348  T
Q  259 ttatccaaggagtgtccgtgcttcatag 286  Q
    | |||  ||||||| ||||| |||||||    
T  1815349 taatctgaggagtgaccgtgattcatag 1815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 40181889 - 40181976
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtg 272  Q
    ||||||||||| ||| |||||||||||||||| |||||||||||||| |||||||||  |||| ||||||||||| |||| |||||||    
T  40181889 agaaaatcacataattcagtgtaattatatgtatcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 40258972 - 40258874
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||| ||| ||||||||||| | ||||||||||| |||||||||| |||| |||||  |||||||||| |||| |||||||||| |||||||||    
T  40258972 aaaatcacataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 40917808 - 40917879
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||| |||| |||| ||||||||||||||||    
T  40917808 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 52903269 - 52903365
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||||    ||||| ||||| |||||||| ||||| | | |||||||||||||||||||    
T  52903269 aaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg---tgtgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcatag 52903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 286
Target Start/End: Complemental strand, 2896188 - 2896061
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| ||||| |||||   ||| ||||||||||| ||| |||||||  ||||| |||||||||| ||||||||| ||||| || || ||||||| ||    
T  2896188 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtcagacacgacatgtgtccgagaccgggacacacc 2896089  T
Q  259 ttatccaaggagtgtccgtgcttcatag 286  Q
    | ||||||| ||||||| || |||||||    
T  2896088 taatccaagaagtgtccatgtttcatag 2896061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 9828103 - 9828174
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| ||||| ||||||||||||||| ||||| |||||||| || |||| |||||||||||||||||||||    
T  9828103 gtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 27966039 - 27965940
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    |||||||||  |||| ||||||||||||||||  | ||||| |||||| | |||| ||||||| ||||||||||| |||| |||||||||| ||||||||    
T  27966039 agaaaatcattaaattcagtgtaattatatgt--ccgtgtcagacacgcctcgtgcctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 27965942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 221 - 286
Target Start/End: Original strand, 31015091 - 31015156
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||||||  || |||||||||||    
T  31015091 gtgtcggacacgacacgtgtctgacatcgggacacgcctaatccaaggaggatcagtgcttcatag 31015156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 39130812 - 39130711
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgct 280  Q
    ||||||||||| | | |||  |||||||||||||||||||||||||||||| |||||||   ||||  ||||||||| | |||||| |||||||| ||||    
T  39130812 ttttagaaaattatataatttagtgtaattatatgtgtcggtgtcggacacaacacgtgctcgacattgggacacgcttaatccaaagagtgtccatgct 39130713  T
Q  281 tc 282  Q
    ||    
T  39130712 tc 39130711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 6427531 - 6427594
Alignment:
Q  223 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||||| ||||| ||||||||||| |||  | |||||||||||||||||||    
T  6427531 gtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 38078720 - 38078601
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    |||||||||||   ||| | ||||||||| ||| || |||||||| | |||||||||||||||||||||| |||   ||||  |||||||||| |||| |    
T  38078720 gacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccga 38078621  T
Q  267 ggagtgtccgtgcttcatag 286  Q
    ||||| | ||||||||||||    
T  38078620 ggagtattcgtgcttcatag 38078601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 284
Target Start/End: Complemental strand, 16297322 - 16297223
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtc---ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||||||| ||||||||||| |  ||||   |||||||||||||||  ||||| |||||  |||||||||| |||| ||||||||||||||||||    
T  16297322 aaaatcacaaaattcagtgtaattacaa-tgtccggggtgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttca 16297224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 45534248 - 45534131
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    ||||||||||||||||| ||||||||||| |||  ||||||| ||||| ||||||||| |      ||| ||||||||||  |||||||||||||||| |    
T  45534248 gacacagctaaattttt-agaaaatcacataatttagtgtaagtatatatgtcggtgtggtgtggtacatgtgtctgacatagggacacgccttatccga 45534150  T
Q  267 ggagtgtccgtgcttcata 285  Q
    |||||||  ||||||||||    
T  45534149 ggagtgtttgtgcttcata 45534131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 7918252 - 7918154
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||||| ||| ||||||||||||||||||| |||||| | ||    |||| ||||||||  |||||| ||| |||| ||||||||||||||||||    
T  7918252 agaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtca----acgtttctgacaccaggacacacctaatccgaggagtgtccgtgcttca 7918157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 18556452 - 18556383
Alignment:
Q  219 cggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagtt 288  Q
    ||||||| ||| |||||||| || ||||| ||||||||||| |||| || ||||||||||||||||||||    
T  18556452 cggtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatagtt 18556383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 34712424 - 34712323
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||| ||| |||  |||||||||||||||||| ||||||     ||||||||||  |||| |||||||| || || |||||||||||||||||||||    
T  34712424 agaaaataacataatttagtgtaattatatgtgtcagtgtcgtgtcggacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcat 34712325  T
Q  285 ag 286  Q
    ||    
T  34712324 ag 34712323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 285
Target Start/End: Complemental strand, 6415082 - 6414932
Alignment:
Q  144 cggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc----------ggacacga 233  Q
    ||||||||||||| | |||||| ||||  ||||| | ||| ||||||||||| ||| |||| |||||| |||||||||||||          ||||||||    
T  6415082 cggacacggacactg-acacgccgacatcgctaattatttgagaaaatcacataatacagtttaattagatgtgtcggtgtcattcgatgtcggacacga 6414984  T
Q  234 cacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||| | |||||   | |||| ||||||||||||||||||||    
T  6414983 cacgtgtctgacaccgcgacacatttcatccgaggagtgtccgtgcttcata 6414932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 287
Target Start/End: Complemental strand, 18190147 - 18190047
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| ||| ||| ||||||||||| | |||||| |||| ||||| ||||||||| ||||| ||||||| ||| |||| ||||||||  | |||||||||    
T  18190147 aaaattacataattcagtgtaattacaagtgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccgaggagtgtatgcgcttcatag 18190048  T
Q  287 t 287  Q
    |    
T  18190047 t 18190047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 36906055 - 36906126
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||| |||||||||||||| || ||||||||| ||||||| ||| || ||| |||||||||||||||||||    
T  36906055 tgtgtcagtgtcggacacgacccgcgtctgacactgggacacacctaatgcaa-gagtgtccgtgcttcatag 36906126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 1864921 - 1864874
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  1864921 agaaaatcacataattcagtgtaattatatgtgtcggtgttggacacg 1864874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 9690313 - 9690213
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||||||  | ||||||||| ||||||||||| ||||| ||| |||||||||| ||||| ||||||||||| ||||   ||||||  ||||||||    
T  9690313 agaaaatcacaa--ttcagtgtaatcatatgtgtcggcgtcggccactgacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttca 9690216  T
Q  284 tag 286  Q
    |||    
T  9690215 tag 9690213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 9629900 - 9629834
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    |||||| ||||||||||||||| |||| ||||| |||||||| ||  |||||| |||||||||||||    
T  9629900 gtgtcgatgtcggacacgacacatgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 9629834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 13997903 - 13997957
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 241  Q
    ||||||||| ||| |||||||||||||||||||||||| ||| ||||||| ||||    
T  13997903 aaaatcacataattcagtgtaattatatgtgtcggtgttggagacgacacatgtc 13997957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 291
Target Start/End: Original strand, 15765828 - 15765882
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagtttag 291  Q
    ||||||||||| ||||||||||| |||| | ||||||||||||||||||| ||||    
T  15765828 gtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcataggttag 15765882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 21032265 - 21032335
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| |||||||||||||||| ||||| ||||  | || |||||| |||||||||||||| ||||||||||    
T  21032265 gtgtgggtgtcggacacgacatgtgtccgacatcgagagacgcctaatccaaggagtgtctgtgcttcata 21032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 39953191 - 39953141
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||||||    
T  39953191 ttttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcggacac 39953141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 11412809 - 11412704
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacga-cacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||| ||| ||| || ||| || ||| |||||||||| |||||| | || ||||| |||||  ||||| ||||||||| ||||||||||||||||||    
T  11412809 agaaaatgacataattcaatgtgatcataggtgtcggtgttggacaccaacatgtgtccgacactaggacatgccttatcctaggagtgtccgtgcttca 11412710  T
Q  284 tagttt 289  Q
    | ||||    
T  11412709 tggttt 11412704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 14332683 - 14332634
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgac 234  Q
    ||||||||||| |||  ||||||||||||||| |||||||||||||||||    
T  14332683 agaaaatcacataatttagtgtaattatatgtctcggtgtcggacacgac 14332634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 34371731 - 34371772
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  34371731 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 34371772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 44482248 - 44482289
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  44482248 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 44482289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 6574053 - 6574097
Alignment:
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||||    
T  6574053 gacactgggacacgcctaatccaaggagtgaccgtgcttcatagt 6574097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 13436479 - 13436523
Alignment:
Q  188 aaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||    
T  13436479 aaatcacataattcagtgtaattatatgtgttggtgtcggacacg 13436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 34741894 - 34741965
Alignment:
Q  215 gtgtcggtgtcggacacgaca-cgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||| |||||| ||||||||| |||||| |||||||| |||||||| |||| | |||||||||||||||||||    
T  34741894 gtgttggtgtctgacacgacaacgtgtccgacacggg-acacgcctaatccgaagagtgtccgtgcttcatag 34741965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 1704986 - 1704935
Alignment:
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||| ||||| | ||||||||| ||||||||||||||| ||||||||||    
T  1704986 acgtgtccgacaccgagacacgcctaatccaaggagtgtccatgcttcatag 1704935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 5944342 - 5944413
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||| || ||||||| |||| |||| ||||| |||| |||||| |||| |||||||| ||||||||||||    
T  5944342 gtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 6612171 - 6612112
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    |||||| |||||||||||| | ||||| |||||  |||||||||| ||||||||||||||    
T  6612171 gtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 9709838 - 9709885
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||||||    
T  9709838 agaaaatcacataattcgttgtaattatatgtgtcggtgtcggacacg 9709885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 17705626 - 17705576
Alignment:
Q  186 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacg 237  Q
    |||||||||| ||| ||||||||||||||||||| ||||||||| |||||||    
T  17705626 gaaaatcacataattcagtgtaattatatgtgtc-gtgtcggacgcgacacg 17705576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 31694710 - 31694639
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||| |||| | |  ||||| || |||||||| |||  |||||||||||||||||||||    
T  31694710 gtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 34315712 - 34315767
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt 222  Q
    ||||||||||||||||||| ||||  ||| ||| | ||||||||||||||||||||    
T  34315712 gacacagctaaattttttaaaaaactacataattcggtgtaattatatgtgtcggt 34315767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 35702579 - 35702540
Alignment:
Q  249 gggacacgccttatccaaggagtgtccgtgcttcatagtt 288  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  35702579 gggacacgcctaatccgaggagtgtccgtgcttcatagtt 35702540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 264
Target Start/End: Complemental strand, 43492535 - 43492456
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatcc 264  Q
    ||||||||||  ||| | |||||||||| |||||||||||| ||||| |||| |||| ||||| || |||||||| ||||    
T  43492535 agaaaatcacgtaattcggtgtaattatgtgtgtcggtgtcagacacaacacatgtccgacaccggcacacgcctaatcc 43492456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 8842736 - 8842666
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    ||||||||||||| | ||||||||||||||||||| || ||||   |||||||||| || ||| |||||||    
T  8842736 tgtaattatatgtattggtgtcggacacgacacgtatccgacatcaggacacgcctaattcaaagagtgtc 8842666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 9630603 - 9630557
Alignment:
Q  244 acacggggacacgccttatccaaggagtgtccgtgcttcatagttta 290  Q
    ||||| |||||||||| |||| |||||||| ||||||||||||||||    
T  9630603 acacgaggacacgcctaatccgaggagtgttcgtgcttcatagttta 9630557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 10577848 - 10577814
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  10577848 atgaagcacggatacggacacggacaccggacacg 10577814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 12443529 - 12443456
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    ||||||||| |||||||||||   ||| ||||||||||| ||| |||||||||| |||||| | |||||||||||    
T  12443529 cggacacgccgacacagctaataatttgagaaaatcacataattcagtgtaattgtatgtgac-gtgtcggacac 12443456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 21530728 - 21530778
Alignment:
Q  206 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 256  Q
    |||||||| |||||||||||||||||||||| |||| |||||  |||||||    
T  21530728 taattataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 21530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 281
Target Start/End: Original strand, 26830608 - 26830701
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    ||||||||| |||  | |||||||||| |||||| |||| ||||| ||||||||  || || ||||||||||| |||  ||||||||||||||||    
T  26830608 aaaatcacataattaaatgtaattataagtgtcg-tgtcagacactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 38078769 - 38078735
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  38078769 atgaagcacggatacggacacggacaccggacacg 38078735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 20157391 - 20157350
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||    
T  20157391 agaaaatcacataattcagtgtaatcatatgtgtcggtgtcg 20157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 22881655 - 22881606
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    ||||||||| |||  |||||||||| | ||||||||||||||||||||||    
T  22881655 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacac 22881606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 24577255 - 24577186
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||||||||||||||| ||||   ||| | ||||||||| ||| ||||||||||| | ||||||||||||    
T  24577255 cggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 25361904 - 25361945
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||    
T  25361904 agaaaatcacataattcagtgtaattatatgtgtcagtgtcg 25361945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 32899937 - 32900010
Alignment:
Q  214 tgtgtcggtgtcggaca-cgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||| |||| | |||| ||||| ||||||| ||| |||| |||| ||||| ||||||||||    
T  32899937 tgtgtcggtgtcggacaccgacgcatgtcggacaccgggacacccctaatccgaggattgtccttgcttcatag 32900010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 288
Target Start/End: Complemental strand, 38076008 - 38075907
Alignment:
Q  188 aaatcacaaaatgcagtgtaattatatgtgtcggtgtcggaca-cgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||| ||  ||||||||| |||||||||||||||||||| |||   ||| | ||||| ||||||||||| ||   |||||||| | ||||||||||    
T  38076008 aaatcacataagtcagtgtaatcatatgtgtcggtgtcggacatcgatgtgtgaccgacaccgggacacgcctaatttgaggagtgtacatgcttcatag 38075909  T
Q  287 tt 288  Q
    ||    
T  38075908 tt 38075907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 48548075 - 48548042
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacac 163  Q
    ||||||||| ||||||||||||||||||||||||    
T  48548075 atgaagcacggatacggacacggacaccggacac 48548042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 285
Target Start/End: Complemental strand, 10572575 - 10572535
Alignment:
Q  245 cacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  10572575 cacgtggacacgcctaattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 17831534 - 17831462
Alignment:
Q  215 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| ||||||||||| |||| ||||| ||||| ||||||||||| |||  |||||||||| || |||||||    
T  17831534 gtgtcagtgtcggacaccgacatgtgtccgacaccgggacacgcctaatcttaggagtgtccatgtttcatag 17831462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 22947813 - 22947849
Alignment:
Q  250 ggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| |||| |||||||||||||||||||||    
T  22947813 ggacacgcctaatccgaggagtgtccgtgcttcatag 22947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 2e-54; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 130 - 286
Target Start/End: Complemental strand, 13845612 - 13845465
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| |||||||||||||||||||         |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13845612 atgaagcacggatacggacacggacaccg---------acacagttaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 13845522  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13845521 acgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcatag 13845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 159 - 290
Target Start/End: Original strand, 35222930 - 35223061
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| |||||| ||||  |||||||||||||||| ||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  35222930 gacacgccgacacaactaacatttttagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgtctgacacggggacacgct 35223029  T
Q  259 ttatccaaggagtgtccgtgcttcatagttta 290  Q
    |||||| |||||||||||||||||||||||||    
T  35223030 ttatccgaggagtgtccgtgcttcatagttta 35223061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 184 - 267
Target Start/End: Original strand, 2941575 - 2941658
Alignment:
Q  184 tagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaag 267  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||    
T  2941575 tagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacatggggatatgccttatccaag 2941658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 40993374 - 40993275
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| |||| |||||||||| ||||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 9494956 - 9494846
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    |||||||||||||| ||||||||| | |||  |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  9494956 aataaagatgacacaattccctttggaaacgcacaaatcagaagcagaagcagaaaacgaacatccattccccaagaacaaaaccctatcccctaaactc 9494857  T
Q  119 gtcaatttcac 129  Q
     |||| |||||    
T  9494856 atcaaattcac 9494846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 14027961 - 14028066
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg---------ctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcg 220  Q
    ||||||||| |||||||||||||||||||||||||         | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14027961 atgaagcacggatacggacacggacaccggacacgacacggacaccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcg 14028060  T
Q  221 gtgtcg 226  Q
    ||||||    
T  14028061 gtgtcg 14028066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 130 - 286
Target Start/End: Original strand, 20503430 - 20503584
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| |||||||||||| |||| | |||||| |||||| | ||   ||| | ||||| ||| ||| ||||||||||| | |||||||||| ||||    
T  20503430 atgaagcacggatacggacacg-acactg-acacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggac 20503527  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||| |||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  20503528 acgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 55401095 - 55401194
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| |||  |||||||||| | ||||||||||||||||||||||||||| ||||| | ||||||||| |||| |||||||||||||||||||||    
T  55401095 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 28918021 - 28918120
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg--gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| ||| ||||||||||| | ||||||||||||  ||||||||||||||| ||||| ||||||||||| ||||||||||||||| ||||||||    
T  28918021 aaaatcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 8789591 - 8789489
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg--acacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 282  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||||||  |||| |||| ||||| | ||||||||| |||| |||||||||||||||||    
T  8789591 agaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttc 8789492  T
Q  283 ata 285  Q
    |||    
T  8789491 ata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 41985598 - 41985696
Alignment:
Q  21 taaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcg 119  Q
    |||||||||||| ||| |||||   ||||||||| || |||||||| |||||||||||||||||||||||||| |||||||| |||||||| |||||||    
T  41985598 taaagatgacacaatttcctttgacaacagacaaatccgaagcagaagcagaaaacgaacatccattccccaagaacaaaactctatcccctaaactcg 41985696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 10954972 - 10955074
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaagg---agtgtccgtgcttca 283  Q
    ||||||||| ||| ||||||||| | | ||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||   |||||||||||||||    
T  10954972 aaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttca 10955071  T
Q  284 tag 286  Q
    |||    
T  10955072 tag 10955074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 18426969 - 18427068
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| ||| | |||||||||||| ||||||||||||| |||||||||||| | ||| ||||||| ||| |||  ||||||||||||| |||||||    
T  18426969 aaaatcacataattcggtgtaattatatatgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 157 - 286
Target Start/End: Original strand, 27505236 - 27505370
Alignment:
Q  157 cggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggg 250  Q
    |||||| || ||||||||||| | |||||| ||||||||| |||  |||||||||| | ||||||||||||     ||||||||||||||| ||||| ||    
T  27505236 cggacaagccgacacagctaataattttta-aaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacacgacacgtgtccgacaccgg 27505334  T
Q  251 gacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||| |||| |||| |||||||||||||||||||||    
T  27505335 gacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 41961650 - 41961579
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| |||| || ||||||||||||||||||    
T  41961650 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 9407334 - 9407444
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    |||||||| ||||| ||||||||| | |||| |||| || ||||| || |||||||| |||||||||||| | || ||||||||||||||||| ||||||    
T  9407334 aataaagaagacacaattccctttggcaacacacaaatccgaagctgaagcagaaaatgaacatccattcacaaagaacaaaaccctatcccctaaactc 9407433  T
Q  119 gtcaatttcac 129  Q
     |||| |||||    
T  9407434 atcaacttcac 9407444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 215 - 289
Target Start/End: Original strand, 25064966 - 25065040
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagttt 289  Q
    |||| |||||||||||||||||||||||||||| ||||||||  |||||| |||||||| |||||| ||||||||    
T  25064966 gtgttggtgtcggacacgacacgtgtctgacaccgggacacggtttatccgaggagtgttcgtgctccatagttt 25065040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 4987291 - 4987222
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||| |||| |||||||||||| ||||||    
T  4987291 gtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 41980849 - 41980926
Alignment:
Q  46 aacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaa 123  Q
    ||||||||| |  |||||||| ||| |||||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  41980849 aacagacaaatttgaagcagaagcaaaaaacgaacatccattccccaagaacaaaactctatcccctaaactcgtcaa 41980926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 3631708 - 3631796
Alignment:
Q  191 tcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 279  Q
    ||||| ||| ||||||||||||||||| | |||||||||||||||| |||| |||||  ||||||||||  ||| ||||||||||||||    
T  3631708 tcacataattcagtgtaattatatgtgccagtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 9617611 - 9617519
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 111  Q
    |||||||||||||| ||||||||| | |||| |||| || |||||||| |||||||| |||||||||||| | |  |||||||||||||||||    
T  9617611 aataaagatgacacaattccctttggaaacacacaaatctgaagcagaagcagaaaatgaacatccattcacaaggaacaaaaccctatcccc 9617519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 15864868 - 15864950
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||| ||| |||||| |||||||||| ||||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  15864868 agtgtaatcataggtgtcg-tgtcggacaccgacacgtgtctgacacggg-acacgcctaatccaaagagtgtccgtgcttcata 15864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 288
Target Start/End: Complemental strand, 4466641 - 4466538
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| | ||| |||||||  |||||||| |||||||||| || | | ||||| ||||| |||||||| ||||| | |||||||||||||||||||    
T  4466641 agaaaatcatataattcagtgtagctatatgtgccggtgtcggatacaagatgtgtccgacactgggacacggcttattcgaggagtgtccgtgcttcat 4466542  T
Q  285 agtt 288  Q
    ||||    
T  4466541 agtt 4466538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 203 - 286
Target Start/End: Original strand, 7171537 - 7171620
Alignment:
Q  203 gtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| | |||| |||||||||||||||||||||| ||||| | ||||||||| |||||||||||||   ||||||||||    
T  7171537 gtgtaattacaagtgttggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgtatatgcttcatag 7171620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 9336541 - 9336611
Alignment:
Q  52 caactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtca 122  Q
    |||||| |||||||| |||||||||||||||||||||||||| ||||||||| |||| || ||| ||||||    
T  9336541 caactcggaagcagaagcagaaaacgaacatccattccccaagaacaaaaccttatctcctaaattcgtca 9336611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 11251996 - 11252095
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||  ||||||||||| ||||| ||||||||| | ||  || |||||||| |||| ||||||||| |||||||||    
T  11251996 agaaaatcacataattcagtgtaattat--gtgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcat 11252093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 14209172 - 14209250
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagtttagga 293  Q
    ||||||||||||||||||||||||||  ||||  |||| || ||| ||||||| |||||||||||||||||| ||||||    
T  14209172 gtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcataggttagga 14209250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 25093520 - 25093582
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||| |||||    
T  25093520 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacac 25093582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 34185116 - 34185050
Alignment:
Q  222 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagtt 288  Q
    ||||||||| |||| ||||| ||||| ||||||||||| |||| |||||||||||||||||||||||    
T  34185116 tgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagtt 34185050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 9425542 - 9425651
Alignment:
Q  20 ataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcg 119  Q
    ||||||||||||| ||||||||| | |||| |||| || ||||| || |||||||| |||||||||||| | || ||||||||||||| ||  ||||||     
T  9425542 ataaagatgacacaattccctttggcaacacacaaatccgaagctgaagcagaaaatgaacatccattcacaaagaacaaaaccctattccttaaactca 9425641  T
Q  120 tcaatttcac 129  Q
    |||| |||||    
T  9425642 tcaacttcac 9425651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 285
Target Start/End: Complemental strand, 16000008 - 15999951
Alignment:
Q  228 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||| ||||| ||||||||||| ||||||||||||||||||| |||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 186 - 286
Target Start/End: Original strand, 8842348 - 8842448
Alignment:
Q  186 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||| |||   |||||||||||| |||||||||| |||||||||| |||  || |  | ||||||||| |||| ||||||||||||||||||||    
T  8842348 gaaaatcacataatttggtgtaattatatatgtcggtgtcagacacgacacatgttagatattgagacacgcctaatccgaggagtgtccgtgcttcata 8842447  T
Q  286 g 286  Q
    |    
T  8842448 g 8842448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 24205082 - 24204983
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||| ||| ||| ||||||||||||| |||||| |||||||||| ||| |||||| |||||  |||||||||| || | ||||||||||||||||||    
T  24205082 agaaaatgacataatacagtgtaattataagtgtcg-tgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttca 24204984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 189 - 284
Target Start/End: Original strand, 25775531 - 25775624
Alignment:
Q  189 aatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||| ||| ||||||||||| | ||||||||||||||||||   |||||| |||||  |||||||||| |||| |||||||| ||||||||||    
T  25775531 aatcacataattcagtgtaattacaagtgtcggtgtcggacacg--tcgtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 286
Target Start/End: Complemental strand, 26492284 - 26492145
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    ||||||||||| | |||||| |||| ||||||   ||| | ||||||| | ||| ||||||||||| | || ||||||||||||||||||| ||||||||    
T  26492284 gacacggacactg-acacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcggacacgacacatgtctgac 26492186  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||   |||||| || |||| |||| |||||| |||||||||    
T  26492185 accaagacacgtctaatccgaggaatgtccgcgcttcatag 26492145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 29508464 - 29508567
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcg------gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgct 280  Q
    ||||||| | ||| ||||||||||||||||||||      ||||||||||||||||  ||| ||||| |||||||| || ||||||| ||||||||||||    
T  29508464 aaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcggacacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgct 29508563  T
Q  281 tcat 284  Q
    ||||    
T  29508564 tcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 9655490 - 9655395
Alignment:
Q  34 attccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 129  Q
    ||||||||| | |||| |||| || ||||| || ||||||||||||||||| |  ||||||||||||||||||||||| ||| || |||| |||||    
T  9655490 attccctttggaaacacacaaatccgaagctgatgcagaaaacgaacatccttcgcccaaaaacaaaaccctatcccctaaattcatcaacttcac 9655395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 9695759 - 9695672
Alignment:
Q  24 agatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 111  Q
    ||||||||| |||||| || | |||| ||||||| |||||||| ||||| ||||||||  | | ||||||||||||||||||||||||    
T  9695759 agatgacacaattcccatttgcaacacacaactctgaagcagatgcagagaacgaacagtcttcccccaaaaacaaaaccctatcccc 9695672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 285
Target Start/End: Complemental strand, 24633498 - 24633343
Alignment:
Q  133 aagcactgatacggacacggacacc----ggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgga 228  Q
    |||||| |||||||||||||||||     |||||| ||||||||| |||   |||   ||||||||  ||| || ||||||||||||||||||||| |||    
T  24633498 aagcacggatacggacacggacacgacatggacactctgacacagttaataatttggaaaaatcacgtaattcaatgtaattatatgtgtcggtgttgga 24633399  T
Q  229 cacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||| ||||| |||| || |||||||| || | | ||||| ||||||||||||    
T  24633398 cacgacacttgtctaacaccggtacacgcctaattcga-gagtgcccgtgcttcata 24633343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 9343823 - 9343905
Alignment:
Q  29 acacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 111  Q
    |||| ||| ||| ||| |||| |||| || |||||||| ||||||||||||||| |||||||||| |||||||| ||||||||    
T  9343823 acacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccc 9343905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 287
Target Start/End: Complemental strand, 51206414 - 51206292
Alignment:
Q  165 ctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatcc 264  Q
    |||||||||||||   ||| | ||||||||| ||| |||||||| || | |||||||||||||||||    || ||| ||||| |||| ||  || ||||    
T  51206414 ctgacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcggacacatgtcgcgtccgacaccgggatacctctaatcc 51206315  T
Q  265 aaggagtgtccgtgcttcatagt 287  Q
    |||||||||||||||||||||||    
T  51206314 aaggagtgtccgtgcttcatagt 51206292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 7928470 - 7928515
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  7928470 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 7928515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 9329837 - 9329893
Alignment:
Q  52 caactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatc 108  Q
    |||||| |||||||| |||||||||||| ||||||||||||| ||||||||| ||||    
T  9329837 caactcggaagcagaagcagaaaacgaatatccattccccaagaacaaaaccttatc 9329893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 13414469 - 13414533
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    |||||| | |||| ||||||||||||| | ||| || ||||||||||||||||||||||||||||    
T  13414469 gacacaaccaaatgttttagaaaatcaaataattcaatgtaattatatgtgtcggtgtcggacac 13414533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 14216957 - 14217021
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||  ||||| ||||||| ||| |||| || |||||||||||||||||    
T  14216957 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 14223086 - 14223150
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||  ||||| ||||||| ||| |||| || |||||||||||||||||    
T  14223086 gtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 4990955 - 4990904
Alignment:
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttcatagtttaggac 294  Q
    |||||| |||||||||| |||| ||||||||||||||||||||| |||||||    
T  4990955 gacacgtggacacgcctaatccgaggagtgtccgtgcttcatagcttaggac 4990904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 9646497 - 9646402
Alignment:
Q  34 attccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 129  Q
    ||||||||| | |||| |||| || ||||| || ||||||||||||||||| |  || |||||||||||||||||||| ||| || |||| |||||    
T  9646497 attccctttggaaacacacaaatccgaagctgatgcagaaaacgaacatccttcgccaaaaaacaaaaccctatcccctaaattcatcaacttcac 9646402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 15796294 - 15796223
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||| |||||||||||| |||||||||  |||| || |||||||| |||||| |||||| ||||||||||||    
T  15796294 gtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcatag 15796223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 9397753 - 9397863
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    |||||||| ||||| ||||||||| | |||| |||| ||  |||| || || ||||| |||||||||||| | || ||||| ||||||||||| ||||||    
T  9397753 aataaagacgacacaattccctttggcaacacacaaatccaaagctgaagcggaaaatgaacatccattcacaaagaacaagaccctatcccctaaactc 9397852  T
Q  119 gtcaatttcac 129  Q
     |||| |||||    
T  9397853 atcaacttcac 9397863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 285
Target Start/End: Original strand, 37077418 - 37077488
Alignment:
Q  216 tgtcggtgtcggacacg-acacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| ||||| || | |||| ||||||||||||| ||| ||||||||| |||||||||||||||    
T  37077418 tgtcggtgtcgtacacggacgcatgtccgacacggggacacacctaatccaaggaatgtccgtgcttcata 37077488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 45451571 - 45451633
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||||| | | |||| |||| |||||||||||||||||||||||||| |||| |||||    
T  45451571 agaaaatcacatacttcagtataataatatgtgtcggtgtcggacacgacacatgtccgacac 45451633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 49505245 - 49505148
Alignment:
Q  134 agcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||| |||| ||| |||||||||| |||||| || || |||||   ||| ||||||||||| |||  |||||||||||||||||| ||||||||||||    
T  49505245 agcacggatatggaaacggacaccg-acacgcagagaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggacacg 49505148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 8383249 - 8383322
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||| ||||| |||||   ||| ||||||||| | ||| ||||||||||||| ||||||||||||||||||    
T  8383249 gacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 201 - 241
Target Start/End: Complemental strand, 6780444 - 6780404
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 241  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  6780444 cagtgtaattatatgtgttggtgtcggacacaacacgtgtc 6780404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 9352913 - 9352961
Alignment:
Q  63 cagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 111  Q
    |||| |||||||||||||||||| |||||| ||||||||||||| ||||    
T  9352913 cagaagcagaaaacgaacatccactccccacaaacaaaaccctaccccc 9352961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 9377054 - 9377146
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 111  Q
    |||||||||||||| ||| ||||| | || | |||  ||  ||||||| |||| ||||||||||||| |||||| |||||||| |||||||||    
T  9377054 aataaagatgacacaatttcctttgggaagacacagatcccaagcagaagcaggaaacgaacatccactccccacaaacaaaatcctatcccc 9377146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 9448322 - 9448374
Alignment:
Q  59 gaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccc 111  Q
    |||||||| ||||||||||||||  |||||||||| |||||||| ||||||||    
T  9448322 gaagcagaagcagaaaacgaacagtcattccccaagaacaaaacactatcccc 9448374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 10690257 - 10690193
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| ||||||||||||||||| ||||| ||| |||| |||| |||  ||||||||||    
T  10690257 gtgtcggacacaacacgtgtctgacacggcgacacacctaatccgaggaatgtatgtgcttcata 10690193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 11665964 - 11666070
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 275  Q
    ||||||||| |||  |||||||||||||||||||||||||           |||||||||||||||||| |  || |||||||| || ||||||||||||    
T  11665964 aaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgatatcggaacacgcctaattcaaggagtgtcc 11666063  T
Q  276 gtgcttc 282  Q
    |||||||    
T  11666064 gtgcttc 11666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 14832158 - 14832202
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgcct 259  Q
    |||||||| |||||||||||||||||| ||||| |||||||||||    
T  14832158 gtgtcggtatcggacacgacacgtgtccgacaccgggacacgcct 14832202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 20389636 - 20389694
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||| ||| ||||||||| ||||| ||||||||||||||| |||||||||||||||    
T  20389636 aaaatcacataattcagtgtaat-atatgcgtcggtgtcggacac-acacgtgtctgacac 20389694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 55213020 - 55213092
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||| ||| ||||||||| ||||| | ||||||| | ||||||| ||| |||||||| |||||    
T  55213020 tgtgtcggtgtcgggcacaacacgtgtccgacaccgagacacgcataatccaagaagtatccgtgctacatag 55213092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 32804581 - 32804485
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| |||  ||||||||||||||||||    ||||||||||||| |||| | ||| |  | |||||| |||  |||||||||||||||||||    
T  32804581 agaaaatcacataatttagtgtaattatatgtgtc----tcggacacgacacatgtccgccactgaaaaacgcctaatctgaggagtgtccgtgcttcat 32804486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 40052380 - 40052431
Alignment:
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||| ||||| ||||||||||| |||| |||||||| ||||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatag 40052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 750732 - 750698
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  750732 atgaagcacggatacggacacggacaccggacacg 750698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 9416541 - 9416651
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    ||||||||  |||| |||||||||||||||| |||  ||  | || || |||||||| ||||||  |||| | || ||||| ||||||||||| ||||||    
T  9416541 aataaagacaacacaattccctttagtaacacacatatccaaggctgaagcagaaaatgaacatttattcacgaagaacaacaccctatcccctaaactc 9416640  T
Q  119 gtcaatttcac 129  Q
    ||||| |||||    
T  9416641 gtcaacttcac 9416651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 11507515 - 11507469
Alignment:
Q  186 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    |||||||||| ||| |||||||||||||||| ||||| |||||||||    
T  11507515 gaaaatcacataattcagtgtaattatatgtttcggtatcggacacg 11507469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 38731232 - 38731278
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgg 227  Q
    ||||| ||||||||| ||| ||||||| |||||||||||||||||||    
T  38731232 ttttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcgg 38731278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 7614456 - 7614396
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgaca 246  Q
    ||||||||||| ||| |||| ||||||||| ||||||||||| ||||| |||| ||||||||    
T  7614456 agaaaatcacataattcagtataattatatatgtcggtgtcgaacacggcacg-gtctgaca 7614396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 17568783 - 17568750
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacac 163  Q
    ||||||||| ||||||||||||||||||||||||    
T  17568783 atgaagcacggatacggacacggacaccggacac 17568750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 25074841 - 25074914
Alignment:
Q  214 tgtgtcggtgtcggacacga-cacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||| ||||| | | |||||| ||||| ||||||| ||| |||| |||||||| ||||||||||||    
T  25074841 tgtgtcggtgtctgacaccaacgcgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 25074914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 27903684 - 27903757
Alignment:
Q  214 tgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||| || ||| |||||||||||| ||  || |||| |||| || ||||||||||||||||||    
T  27903684 tgtgtcggtgtcggataccgacgcgtgtctgacactggatcatgcctaatccgagaagtgtccgtgcttcatag 27903757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 49651777 - 49651716
Alignment:
Q  225 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||| | || ||||| ||||||| ||| |||| || ||||||||||||||||||    
T  49651777 cggacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcatag 49651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 1389908 - 1389956
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| |||||  ||||| |||| |||||||||||||||||||||||||    
T  1389908 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 1389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 8039835 - 8039763
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    |||||||||||||||| || || |||| ||||| ||||||||| | |||| | |||| || ||||||||||||    
T  8039835 gtgtcggtgtcggacatgagacatgtccgacaccgggacacgcttaatccgaagagtatctgtgcttcatagt 8039763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 9402347 - 9402403
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaa 75  Q
    ||||||||||| || ||||||||||| |||| |||| || || ||||||||||||||    
T  9402347 aataaagatgatacaattccctttaggaacacacaaatctgaggcagaggcagaaaa 9402403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 9420586 - 9420642
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaa 75  Q
    ||||||||||| || ||||||||||| |||| |||| || || ||||||||||||||    
T  9420586 aataaagatgatacaattccctttaggaacacacaaatctgaggcagaggcagaaaa 9420642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 14979224 - 14979268
Alignment:
Q  242 tgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||| ||||||||||| | || |||||||||||||||||||||    
T  14979224 tgacaccgggacacgcctaacccgaggagtgtccgtgcttcatag 14979268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 26508102 - 26508166
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtg 223  Q
    |||||||||||||||||||   ||| | ||||||||| ||| ||||||||||| | |||||||||    
T  26508102 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 52369834 - 52369906
Alignment:
Q  215 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||| |||||||| ||| ||||||  |||| ||||||| |||  ||| |||||||||||||||||||||    
T  52369834 gtgtcggtatcggacaccgacgcgtgtccaacaccgggacacacctattccgaggagtgtccgtgcttcatag 52369906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 4e-52; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 143 - 286
Target Start/End: Original strand, 24009274 - 24009414
Alignment:
Q  143 acggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtct 242  Q
    ||||| ||||||||  ||||||  ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  24009274 acggatacggacac--gacacggcgacacagctaatttttttagaaaatcacaaaatgcagtgtaaat-tatgtgtcggtgtcggacacgacacgtgtct 24009370  T
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  24009371 gacacggggacacgccttatccaaggagtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 159 - 286
Target Start/End: Complemental strand, 20242794 - 20242667
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| |||||| |||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  20242794 gacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgtctgacacgaggacacgcc 20242695  T
Q  259 ttatccaaggagtgtccgtgcttcatag 286  Q
    |||||| | ||||||| |||||||||||    
T  20242694 ttatccgaagagtgtctgtgcttcatag 20242667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 157 - 287
Target Start/End: Complemental strand, 36096444 - 36096303
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt-----------gtcggacacgacacgtgtctgac 245  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||           |||||||||||||||||||||||    
T  36096444 cggacacgccgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgtctgac 36096345  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    |||||||||||||||| |||| ||||||||||||||||||||    
T  36096344 acggggacacgccttaaccaaagagtgtccgtgcttcatagt 36096303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 20694449 - 20694345
Alignment:
Q  19 aataaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactc 118  Q
    |||||||||||||| ||||||||| | |||| |||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  20694449 aataaagatgacacaattccctttggcaacacacaaatccgaagcagaagcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactt 20694350  T
Q  119 gtcaa 123  Q
    |||||    
T  20694349 gtcaa 20694345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 130 - 289
Target Start/End: Original strand, 41843405 - 41843568
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt----- 224  Q
    ||||||||| |||| | |||||||||| | |||||| |||| | ||||||||||||| |||||||| ||| | || |||||||||||||||||||         
T  41843405 atgaagcacggatatgaacacggacactg-acacgccgacaaaactaaattttttaggaaatcacataattcggtataattatatgtgtcggtgttgtgt 41843503  T
Q  225 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagttt 289  Q
    ||||| ||||||||||| ||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  41843504 cggacgcgacacgtgtccgacacggggacacgctttatccgaggagtgtctgtgcttcatagttt 41843568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 162 - 284
Target Start/End: Complemental strand, 2438783 - 2438661
Alignment:
Q  162 acgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctta 261  Q
    ||||||||||||||||   ||| | ||||||||| ||| ||||||||||| | |||||||||||||||||||||| |||| ||||| ||||||||||| |    
T  2438783 acgctgacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaa 2438684  T
Q  262 tccaaggagtgtccgtgcttcat 284  Q
    ||| |||||||||||||||||||    
T  2438683 tccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 130 - 286
Target Start/End: Original strand, 37558941 - 37559096
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgga 228  Q
    ||||||||| ||||||||||||||||| | |||||| ||||||||||| | ||| || ||||||||| ||| || |||||||| | ||||||||||||||    
T  37558941 atgaagcacggatacggacacggacactg-acacgccgacacagctaataatttgta-aaaatcacataattcaatgtaattacaagtgtcggtgtcgga 37559038  T
Q  229 cacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |  |||||||||| ||||| || |||||| | |||| |||||||||||||||||||||    
T  37559039 cttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 201 - 290
Target Start/End: Original strand, 28596503 - 28596592
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagttta 290  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||  |||||| ||| |||| |||||||||||||||||||| ||||    
T  28596503 cagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcatacttta 28596592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 146 - 286
Target Start/End: Complemental strand, 34785061 - 34784911
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgac 234  Q
    ||||||||||| | |||| | |||||| |||| ||||||||||||||||| |||  |||||||||||||||||||||||||           ||||||||    
T  34785061 gacacggacactg-acacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgac 34784963  T
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    || ||||||||||||||||||||||||| | ||||||||| |||||||||||    
T  34784962 acctgtctgacacggggacacgccttattcgaggagtgtctgtgcttcatag 34784911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 18841080 - 18840951
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    |||||||||||||| ||||   ||| | ||||| ||| |||  |||||||||| | ||||||||||| |||||||||| |||| ||||| ||||||| ||    
T  18841080 gacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccgggacacacc 18840981  T
Q  259 ttatccaaggagtgtccgtgcttcatagtt 288  Q
    | |||| |||||||||||||||||||||||    
T  18840980 taatccgaggagtgtccgtgcttcatagtt 18840951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 130 - 287
Target Start/End: Complemental strand, 38117260 - 38117098
Alignment:
Q  130 atgaagcactgatacggacac-ggacac----cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 224  Q
    ||||||||| ||||||||||| ||||||    | ||||||| |||||||||||   ||| | ||||||||| | | | ||||||||| | |||| |||||    
T  38117260 atgaagcacggatacggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgt 38117161  T
Q  225 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    ||||||| ||||||||| ||||| ||||||||||| |||| ||| ||||||||||||||||||    
T  38117160 cggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatagt 38117098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 26769571 - 26769641
Alignment:
Q  216 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||| |||||||||||||||||| ||||| ||||||||||| |||| |||||||||||||||||||||    
T  26769571 tgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 204 - 286
Target Start/End: Complemental strand, 34994004 - 34993922
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||| |||||| |||||||| ||||| ||||| ||||||||||| || |||||||||| ||||||||||||    
T  34994004 tgtaattatatgtgtcagtgtcgaacacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatag 34993922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 5040754 - 5040845
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||| ||| || |||||||| | ||||||||||||||||||||| ||||| ||| | |||||||||||  |||||||||||||||||    
T  5040754 aaaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctagtccaaggagtgtccgtg 5040845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 5367213 - 5367292
Alignment:
Q  188 aaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaag 267  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| | || ||| | ||||||||||| |||||||    
T  5367213 aaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatatccgactccgggacacgcctaatccaag 5367292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 15972893 - 15972992
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| ||| ||| ||||||||||| | ||||||||||||||||||||||||||| ||| | ||||||| ||| |||| | || ||||||||||||||||    
T  15972893 aaaattacacaattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatag 15972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 30717530 - 30717459
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||| |||||||||||||||||||  ||||| |||| |||||| ||||||||||||||||||||||||||    
T  30717530 gtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 35056927 - 35056998
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||||||||||||| |||||||  |||||||| |||  |||||||||||||||||||||    
T  35056927 gtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 37419802 - 37419873
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||||||  |||||| ||||| ||||||||||| |||| |||||||||||||||||||||    
T  37419802 gtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 273
Target Start/End: Original strand, 12224243 - 12224329
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 273  Q
    |||||| || ||| || |||||||| | ||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||    
T  12224243 aaaatcccataatccaatgtaattacaagtgtcggtgtcggacacgatacgtgtccgacactgggacacgcctaatccaaggagtgt 12224329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 282
Target Start/End: Complemental strand, 37411285 - 37411188
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 282  Q
    ||||||||||| ||| |||||| ||||||||||||| ||||| ||||||| |||||| ||||| |||||||||||  ||| ||||||| | |||||||    
T  37411285 agaaaatcacataattcagtgtgattatatgtgtcgatgtcgaacacgacgcgtgtccgacactgggacacgcctagtccgaggagtgcctgtgcttc 37411188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 18054772 - 18054716
Alignment:
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  18054772 acgacacgtgtctgacacggaaacacgccttatccaaggaatgtccgtgcttcatag 18054716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 216 - 284
Target Start/End: Original strand, 19942314 - 19942382
Alignment:
Q  216 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| |||| |||||||||| ||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 11223858 - 11223793
Alignment:
Q  220 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||| |||||||||| ||||||||||| |||  |||||||||||||||||||||    
T  11223858 ggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 18054883 - 18054803
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaatttttt-agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||| |||||||| |||||  ||||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  18054883 gacagggacaccg-acacgtcgacacagctaattttttttagaaaatcacaaactgcagtgtaattatatgtgttggtgtcg 18054803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 42511387 - 42511322
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||| ||||||||| ||||| |||||||| || |||| |||||||||||||||||||||    
T  42511387 gtgtcggacacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 32749825 - 32749754
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||| ||||||||  |||| ||||| ||||| ||||||||||||||| |||||||||||| |||||||||    
T  32749825 gtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtccgcgcttcatag 32749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 20922975 - 20922922
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||||||||||| |||  |||||||||||||||||| ||||||||||||    
T  20922975 ttttttagaaaatcacataatttagtgtaattatatgtgtctgtgtcggacacg 20922922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 27084318 - 27084388
Alignment:
Q  216 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||||||||||||  |||| | ||||||||| |||  |||||||||  ||||||||||    
T  27084318 tgtcggtgtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcatag 27084388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 34007016 - 34006930
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacg-acacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| ||| |||||||||| ||||||  |  |||||||||||| || |||| ||| || |||||||||||||||||||||||    
T  34007016 cagtgtaatcataggtgtcggtgtgggacacctattcgtgtctgacaccggaacacacctaattcaaggagtgtccgtgcttcatag 34006930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 279
Target Start/End: Original strand, 21624258 - 21624374
Alignment:
Q  159 gacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgc 257  Q
    ||||||| ||||||||||| | |||| | |||||  || ||| ||||||||||| | ||||||||||||||||||     |||| ||||  ||||||| |    
T  21624258 gacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtcggacacg-----tgtccgacagcgggacacac 21624352  T
Q  258 cttatccaaggagtgtccgtgc 279  Q
    || |||||||||||||||||||    
T  21624353 ctaatccaaggagtgtccgtgc 21624374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 34691844 - 34691799
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||||    
T  34691844 aaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34691799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 34714256 - 34714211
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||||    
T  34714256 aaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34714211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 21616742 - 21616813
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgt 218  Q
    ||||||||||| |||||||| ||||| |||||   ||| ||||||||||| ||| ||||||||||||||||||    
T  21616742 gacacggacac-ggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 22084830 - 22084756
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctga---cacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| ||||||||||| ||||||||||||   ||| ||||||||||| |||| | ||||||| |||||||||||    
T  22084830 gtgtcagtgtcggacacaacacgtgtctgacaccaccgggacacgcctaatccgatgagtgtctgtgcttcatag 22084756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 30404889 - 30404829
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||| ||| ||||||||||| | ||||||| |||||||||||||| |||| |||||    
T  30404889 aaaatcacataattcagtgtaattacaagtgtcggcgtcggacacgacacatgtccgacac 30404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 43586063 - 43585971
Alignment:
Q  168 acacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctt 260  Q
    |||||| |||| |||| ||||||| ||| ||| || |||||| | | ||||||||||||||||||| ||||||| |||||  |||||| ||||    
T  43586063 acacagataaaattttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcagacacatggacacacctt 43585971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 15909699 - 15909632
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||| || ||||||||| |||| ||||||| ||| ||| ||||||||||||||||| | ||||||    
T  15909699 gacacgccgatacagctaaaattttgagaaaattacataattcagtgtaattatatgtgacagtgtcg 15909632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 285
Target Start/End: Complemental strand, 18255980 - 18255945
Alignment:
Q  250 ggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||| |||||||||||||||||||||||||    
T  18255980 ggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 23354652 - 23354582
Alignment:
Q  215 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||| ||||||||| |||  |||||||||||||| |||||||| |||| ||||||||||||| ||||||    
T  23354652 gtgtcggggtcggacaccgaccggtgtctgacacggg-acacgcctaatccgaggagtgtccgtggttcata 23354582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 31808097 - 31808176
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    ||||||||| ||| ||||||||||||||||||| |||| | ||||||||| |||  |||||  |||||| ||| ||||||    
T  31808097 aaaatcacataattcagtgtaattatatgtgtcagtgttgaacacgacacatgttcgacacctggacacacctaatccaa 31808176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 11223930 - 11223864
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 225  Q
    |||||||||||||||||||  |||| | ||||| ||| ||| ||||||||||| | |||||||||||    
T  11223930 gacacgctgacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 15657930 - 15657992
Alignment:
Q  222 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    |||||||| ||||||||||| ||| | |||||||||||  ||| |||||||||| ||||||||    
T  15657930 tgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 21374807 - 21374773
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  21374807 atgaagcacggatacggacacggacaccggacacg 21374773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 23354995 - 23354926
Alignment:
Q  215 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||| || |||||| ||| ||||||||||||||| |||||||| |||| |||||||||| ||||||||    
T  23354995 gtgtcggggttggacaccgacccgtgtctgacacggg-acacgcctaatccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 26769463 - 26769497
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  26769463 atgaagcacggatacggacacggacaccggacacg 26769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 29176528 - 29176446
Alignment:
Q  191 tcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 273  Q
    ||||| ||| ||||||||||||| |||| ||||| ||||||| ||| |||| ||||| | ||||| ||| ||||||| |||||    
T  29176528 tcacataattcagtgtaattataagtgttggtgttggacacggcacatgtccgacactgagacacacctaatccaagaagtgt 29176446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 44860379 - 44860449
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| ||||| |||||||||| ||||| ||||  ||||||| ||| || | ||||||||||||||||||||    
T  44860379 gtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 287
Target Start/End: Original strand, 6940235 - 6940375
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    ||||||||||| | |||||| |||||||||||   ||||| ||| | ||| |||  |||||||||| | |||||||| || |||||||||||||||  ||    
T  6940235 gacacggacactg-acacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggtatccgacacgacacgtgtccaac 6940333  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    ||   ||||| ||| ||| || || |||||||||||| ||||    
T  6940334 accaagacacacctaatcaaatgattgtccgtgcttcgtagt 6940375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 10535734 - 10535685
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||  |||||||||| |||| |||||||| ||||||||||||    
T  10535734 gtgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttcatag 10535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 19536436 - 19536391
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||    
T  19536436 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 19536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 21782816 - 21782743
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    ||||| |||||| | |||||||||||||  |||| |||||||| || |||   |||||||||||||||||||||    
T  21782816 tgtgttggtgtcaggcacgacacgtgtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcatagt 21782743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 31284041 - 31284118
Alignment:
Q  160 acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattat-atgtgtcggtgtcggacacgacac 236  Q
    |||||| ||||| |||||   ||| ||||||||||| ||| || ||||||||| |||||||||||| |||||||||||    
T  31284041 acacgccgacactgctaataatttgagaaaatcacataatccattgtaattattatgtgtcggtgttggacacgacac 31284118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 44860338 - 44860379
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||||||| || ||| ||||||||||||||||||||||||||    
T  44860338 agaaaatcgcataattcagtgtaattatatgtgtcggtgtcg 44860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 14996222 - 14996171
Alignment:
Q  222 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    |||||||||| ||||||||||||||| || |||||||| |||| |||||||||    
T  14996222 tgtcggacac-acacgtgtctgacaccggaacacgcctaatccgaggagtgtc 14996171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 18889632 - 18889592
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 225  Q
    ||||||||||| ||| ||||||||| |||||||||||||||    
T  18889632 agaaaatcacataattcagtgtaatcatatgtgtcggtgtc 18889592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 27447114 - 27447082
Alignment:
Q  130 atgaagcactgatacggacacggacaccggaca 162  Q
    ||||||||| |||||||||||||||||||||||    
T  27447114 atgaagcacggatacggacacggacaccggaca 27447082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 28524419 - 28524479
Alignment:
Q  160 acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcg 220  Q
    |||||| || ||||||||| ||||  | |||||||| ||| ||||||||||||||||||||    
T  28524419 acacgccgatacagctaaaattttgtgcaaatcacataattcagtgtaattatatgtgtcg 28524479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 28677929 - 28678033
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgt-----gtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    ||||||||| ||| ||||||||||||||||     |||||||||  |||||||| ||||| ||||| |||||||| || | |  |||||||||  |||||    
T  28677929 aaaatcacataattcagtgtaattatatgttcggtgtcggtgtcaaacacgacaagtgtccgacacagggacacggctgaccggaggagtgtctatgctt 28678028  T
Q  282 catag 286  Q
    |||||    
T  28678029 catag 28678033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 31283994 - 31284026
Alignment:
Q  130 atgaagcactgatacggacacggacaccggaca 162  Q
    ||||||||| |||||||||||||||||||||||    
T  31283994 atgaagcacagatacggacacggacaccggaca 31284026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 38355928 - 38355888
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 225  Q
    ||||||||||| ||| |||||| ||||||||||||||||||    
T  38355928 agaaaatcacataattcagtgtgattatatgtgtcggtgtc 38355888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 40361778 - 40361738
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacacgacacgtgtct 242  Q
    ||||||||||||| ||| |||||| ||||||||||||||||    
T  40361778 agtgtaattatatctgttggtgtcagacacgacacgtgtct 40361738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 41849354 - 41849422
Alignment:
Q  221 gtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagtt 288  Q
    ||||||||||| ||| |||||||||||| | ||||||||| || | ||  |||||||||||||||||||    
T  41849354 gtgtcggacaccgacgcgtgtctgacaccgcgacacgcctaattctagaggtgtccgtgcttcatagtt 41849422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 1e-49; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 43737892 - 43737752
Alignment:
Q  146 gacacggacaccgg-acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctga 244  Q
    |||||||||||||  |||||| | |||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  43737892 gacacggacaccgacacacgccggcacagctaaattttcttgaaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacaggtgtctga 43737793  T
Q  245 cacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  43737792 cacggggatacgccttatccaaggagtgtccgtgcttcata 43737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 167 - 291
Target Start/End: Complemental strand, 3951596 - 3951471
Alignment:
Q  167 gacacagctaaattttttagaaaa-tcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatcca 265  Q
    ||||||||||||||||| | |||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  3951596 gacacagctaaatttttaaaaaaaatcacaaaatgcagtgtacttatatgtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatcca 3951497  T
Q  266 aggagtgtccgtgcttcatagtttag 291  Q
    |||||| |||||||||||||| ||||    
T  3951496 aggagtttccgtgcttcatagcttag 3951471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 146 - 287
Target Start/End: Complemental strand, 34451116 - 34450960
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg----------------gac 229  Q
    ||||||| ||||| |||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||                |||    
T  34451116 gacacgggcaccg-acacactgacacagctaattttttttgaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcgtgtcggtgtcggac 34451018  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34451017 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 34450960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 130 - 286
Target Start/End: Complemental strand, 36450849 - 36450694
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| ||||||||||||||||| | |||||| |||||| ||||   ||| | ||||||||| ||| ||||||||||| | |||| ||||||||||    
T  36450849 atgaagcacggatacggacacggacactg-acacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggac 36450751  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| |||||| |||||  |||||||||| |||| ||||||||| |||||||||||    
T  36450750 acgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 185 - 284
Target Start/End: Original strand, 3025569 - 3025668
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||||||||| | |||||| || |||| |||||||||||||||||||    
T  3025569 agaaaatcacataattcagtgtaattataggtgtcagtgtcggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 33405425 - 33405324
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    |||||| |||| |||  ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| || |||||| ||||||||||||| |||    
T  33405425 agaaaaacacataatttagtgtaattatatgtgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgctccat 33405326  T
Q  285 ag 286  Q
    ||    
T  33405325 ag 33405324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 201 - 284
Target Start/End: Complemental strand, 926813 - 926730
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||| |||||| || |||||| |||||||||||||||||||    
T  926813 cagtgtaattataagtgtcggtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 26902217 - 26902104
Alignment:
Q  184 tagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgacacgtgtctgacacggggacacgccttatccaaggagtg 272  Q
    |||||||||||| ||| ||||||||||||||||||||||||||           ||||||||||||||||| |||||||||||||||||||  |||||||    
T  26902217 tagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtg 26902118  T
Q  273 tccgtgcttcatag 286  Q
    ||||||||||||||    
T  26902117 tccgtgcttcatag 26902104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 130 - 286
Target Start/End: Original strand, 14134663 - 14134818
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| ||||||||||| ||||| |||||||  ||||   ||||   ||| ||||||||||| ||| |||||||||||||| ||||||||||  ||    
T  14134663 atgaagcacggatacggacaccgacac-ggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtcaaac 14134761  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||| | |||  |||||||||| || | ||||||||||||| |||||||    
T  14134762 acgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcatag 14134818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 20679436 - 20679337
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| | | ||||||||||||| ||||||||||| ||| | ||||||||| ||||| ||||||||||||| || |||||||||| ||||||||    
T  20679436 agaaaatcacatagttcagtgtaattataagtgtcggtgtcagacgcaacacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgcttcat 20679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 130 - 281
Target Start/End: Complemental strand, 31109613 - 31109463
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    |||||||||||||| |||||||||||| | |||||| ||||| | |||   ||| ||||||||| | ||| |||| ||| |||||||||| |||||||||    
T  31109613 atgaagcactgatatggacacggacactg-acacgccgacaccgttaataatttgagaaaatcaaacaattcagtctaactatatgtgtcagtgtcggac 31109515  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    | |   ||||| |||||| ||||||||||| |||| ||||||||||||||||    
T  31109514 atgtgtcgtgtatgacactgggacacgcctaatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 40332209 - 40332307
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||||| ||| ||||||||||| | |||||||||| ||||||||||||||||  |||| ||||| ||||| |||| ||||||||||||| ||||    
T  40332209 agaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttca 40332307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 216 - 285
Target Start/End: Complemental strand, 29447109 - 29447040
Alignment:
Q  216 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||||| |||||||||||  |||||||||| |||| ||||||||||||||||||||    
T  29447109 tgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 143 - 282
Target Start/End: Original strand, 5813569 - 5813707
Alignment:
Q  143 acggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtct 242  Q
    ||||| |||||||| |||||||| |||||||||||   ||| | ||| ||||| | |  ||||||| || | |||||||||||||||||||||||||||     
T  5813569 acggatacggacac-ggacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcggacacgacacgtgtcc 5813667  T
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttc 282  Q
    ||||| ||||||||||| ||   |||||||||||||||||    
T  5813668 gacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 22652035 - 22652106
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| || |||| |||||||||||||||||||||    
T  22652035 gtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 29510304 - 29510233
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||||||| |||||| ||||| ||||||| ||| |||| |||||||||||||||||||||    
T  29510304 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 185 - 289
Target Start/End: Complemental strand, 37283851 - 37283752
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||  |||||||||| |||||||||||||||||   || |||||||| || |||| ||||||| |||||||||||    
T  37283851 agaaaatcacataattcagtgtaattat--gtgtcggtgtgggacacgacacgtgtct---accgggacacgtctaatccgaggagtgcccgtgcttcat 37283757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 4786379 - 4786277
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||||  || |  | |||| | ||||| ||| |||||||||||||||||    
T  4786379 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggatacgacatgtgttcgataacgagacatggcttattcaaagagtgtccgtgcttcat 4786280  T
Q  285 agt 287  Q
    |||    
T  4786279 agt 4786277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 221 - 292
Target Start/End: Complemental strand, 16641974 - 16641903
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagtttagg 292  Q
    ||||||||||||||| |||||| |||| ||||||| ||| |||| ||||||||| |||||||||||||||||    
T  16641974 gtgtcggacacgacatgtgtctaacaccgggacacacctaatccgaggagtgtctgtgcttcatagtttagg 16641903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 18407739 - 18407838
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| ||| ||||||||||| | |||||| || |||||||||||| |||| |||||  |||||||||| ||   |||||||||||||||||||||    
T  18407739 aaaatcacataattcagtgtaattacaagtgtcgctgccggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcatag 18407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 31557016 - 31557115
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| ||| ||||||||||| | || |||||||| |||||||||| |||| |||||  |||||||||| |||||||| |||||| ||| ||||||    
T  31557016 aaaatcacataattcagtgtaattacaagtttcggtgtcagacacgacacatgtccgacaccaggacacgcctaatccaaggtgtgtccatgcctcatag 31557115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 126369 - 126295
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    |||||||||||||||| |||||||||||||||||||||  | || |||||||| || |||| |||||||||||||    
T  126369 tgtaattatatgtgtcagtgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagtgtccgtg 126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 18964184 - 18964309
Alignment:
Q  174 ctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt-------cgg------acacgacacgtgtctgacacggggacacgcctt 260  Q
    |||| ||||||||||||||||| ||| || |||||||||||||||||||||       |||      ||||||||| ||||| |||||| ||||||||||    
T  18964184 ctaatttttttagaaaatcacataattcaatgtaattatatgtgtcggtgtgtcgtgtcggcgttgaacacgacacctgtctaacacggagacacgcctt 18964283  T
Q  261 atccaaggagtgtccgtgcttcatag 286  Q
    |||| ||||||||| |||||||||||    
T  18964284 atccgaggagtgtctgtgcttcatag 18964309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 15816129 - 15816058
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||| ||||||||||||||||||  || ||||| ||||||||||| |||| || ||||||||||||||||||    
T  15816129 gtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 13844665 - 13844591
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    ||||||||| ||||| |||||   ||| ||||||||||| |||  ||||||||||||||||||||||||||||||    
T  13844665 cggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 221 - 286
Target Start/End: Original strand, 8343381 - 8343446
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| ||||||||||||||| ||||| ||||||||||| |||| | ||||||| |||||||||||    
T  8343381 gtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 6065650 - 6065586
Alignment:
Q  222 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||| |||| ||||| || |||||| | || |||||||||||||||||||||||    
T  6065650 tgtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcatag 6065586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 31236646 - 31236570
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacga 233  Q
    ||||||||| ||||| |||||   ||| ||||||||||| ||| || |||||||||||||||||||| |||||||||    
T  31236646 cggacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggacacga 31236570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 214 - 289
Target Start/End: Original strand, 11803317 - 11803392
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagttt 289  Q
    ||||| ||||| ||| ||||||| |||| ||||| || ||||| || |||| ||||||||||||||||||||||||    
T  11803317 tgtgttggtgttggatacgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcatagttt 11803392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 21465471 - 21465542
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| |||||||||||||||||||||  |||| |||| |||||| ||   |||||||||||||||||||||    
T  21465471 gtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcatag 21465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 24205820 - 24205749
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||| |||| || | |||||||||| || |||||||| |||| ||||||||||||| ||||||    
T  24205820 tgtgtcggtgtcgaacacaacgcatgtctgacaccggaacacgcctaatccgaggagtgtccgtgtttcata 24205749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 28745557 - 28745628
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||||||||| |||| | ||| | |||| | || || |||||||||||||||||||||||    
T  28745557 gtgtcggtgtcggacacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgcttcatag 28745628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 29447503 - 29447574
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||| ||||||||| ||||| ||||| |||||| | || |||  |||||||||||||||||||||    
T  29447503 gtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatag 29447574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 286
Target Start/End: Complemental strand, 24413605 - 24413499
Alignment:
Q  180 tttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 279  Q
    |||| ||||||  ||| ||| ||| ||||||||| ||||| |||||||||||||  ||||||  |||  |||||||| || |||| || |||||||||||    
T  24413605 ttttgagaaaaatacataattcagggtaattataagtgtcagtgtcggacacgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgc 24413506  T
Q  280 ttcatag 286  Q
    |||||||    
T  24413505 ttcatag 24413499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 34897103 - 34897149
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  34897103 agaaaatcacataattcagtgtaattatatgtgtcgatgtcggacac 34897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 39820464 - 39820547
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||| ||| |||||| |||||||||| ||| |||||| |||||||| |||||||| |||| || ||||||||||||||||||    
T  39820464 agtgtaatcataggtgtcg-tgtcggacaccgacgcgtgtccgacacggg-acacgcctaatccgagaagtgtccgtgcttcatag 39820547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 4673418 - 4673354
Alignment:
Q  222 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||| | | || ||||| || |||||||| |||||||||||||| |||||||||||    
T  4673418 tgtcggacacgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcatag 4673354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 201 - 273
Target Start/End: Original strand, 8293859 - 8293931
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 273  Q
    |||||||||||||||||||||||||  ||| ||||| | ||||||||  |||||| ||| |||| ||||||||    
T  8293859 cagtgtaattatatgtgtcggtgtcaaacatgacacatatctgacacctggacacacctaatccgaggagtgt 8293931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 17751700 - 17751776
Alignment:
Q  212 tatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    |||||||||||||||||||| ||| | |  | ||||| ||||||||||| |||| ||||||||||| ||||||||||    
T  17751700 tatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatagt 17751776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 17760687 - 17760763
Alignment:
Q  212 tatgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    |||||||||||||||||||| ||| | |  | ||||| ||||||||||| |||| ||||||||||| ||||||||||    
T  17760687 tatgtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatagt 17760763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 22943349 - 22943301
Alignment:
Q  226 ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    |||||||||||||||| ||||| ||||||||||| |||| |||||||||    
T  22943349 ggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 11927125 - 11927086
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  11927125 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 11927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 13436953 - 13436910
Alignment:
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||    
T  13436953 gacaccgggacacgcctaatccaaggagtgtctgtgcttcatag 13436910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 22595952 - 22596068
Alignment:
Q  130 atgaagcactgatacggacac-ggacac----cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 224  Q
    ||||||||| ||||||||||| ||||||    | ||||||| |||||||||||   ||| | ||||| ||| ||| ||||||||||| | |||| |||||    
T  22595952 atgaagcacggatacggacaccggacacaacactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgt 22596051  T
Q  225 cggacacgacacgtgtc 241  Q
    ||||| |||||||||||    
T  22596052 cggacgcgacacgtgtc 22596068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 38079017 - 38079088
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 256  Q
    |||||||||||  || ||||||||||||||| |||| ||||||||||||| | |||| ||||| ||| ||||    
T  38079017 agaaaatcacatgattcagtgtaattatatgcgtcgatgtcggacacgacgcatgtccgacaccgggccacg 38079088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 4948672 - 4948718
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacga 233  Q
    ||||||||| ||| ||||||||||| | |||||||||||||||||||    
T  4948672 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 4948718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 8847277 - 8847315
Alignment:
Q  188 aaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  8847277 aaatcacataattcagtgtaattatatgtgtcggtgtcg 8847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 20873089 - 20873143
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 241  Q
    ||||||||| |||  |||||||||| | ||||||||||||||||||| |||||||    
T  20873089 aaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgatacgtgtc 20873143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 26915246 - 26915200
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgcctta 261  Q
    ||||||||||||||||||| ||||||| ||||  |||||||||||||    
T  26915246 gtgtcggtgtcggacacgatacgtgtcagacattgggacacgcctta 26915200  T

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Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 22197736 - 22197671
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| |||||||||| ||||| ||  ||||||| |||  |||||||||||||||| ||||    
T  22197736 gtgtcggacatgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctttatag 22197671  T

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Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 9383049 - 9383085
Alignment:
Q  250 ggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  9383049 ggacacgcctaatccaagcagtgtccgtgcttcatag 9383085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 9414912 - 9414860
Alignment:
Q  189 aatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 241  Q
    ||||||| ||| ||||| ||||||| |||| |||||| |||||||||||||||    
T  9414912 aatcacataattcagtgcaattataagtgttggtgtcagacacgacacgtgtc 9414860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 13009459 - 13009423
Alignment:
Q  249 gggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  13009459 gggacacgcctaatccaaggagcgtccgtgcttcata 13009423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 13397622 - 13397670
Alignment:
Q  238 tgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||| ||||| | ||||||||| || |||||||||||||||||||||||    
T  13397622 tgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcatag 13397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 28747482 - 28747430
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    ||||||||||||||| | |   || ||||||||||||||||||||||||||||    
T  28747482 ttttttagaaaatcagatagctcaatgtaattatatgtgtcggtgtcggacac 28747430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 34127208 - 34127172
Alignment:
Q  250 ggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  34127208 ggacacacctaatccaaggagtgtccgtgcttcatag 34127172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 44462215 - 44462151
Alignment:
Q  206 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggag 270  Q
    |||| ||||||||||||||| ||||||| || |||| ||||| |||||||| || |||| |||||    
T  44462215 taatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44462151  T

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Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 44469748 - 44469684
Alignment:
Q  206 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggag 270  Q
    |||| ||||||||||||||| ||||||| || |||| ||||| |||||||| || |||| |||||    
T  44469748 taatcatatgtgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccgaggag 44469684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 1e-42; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 146 - 285
Target Start/End: Original strand, 6401478 - 6401627
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt-----------cggacacgac 234  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||           ||||||||||    
T  6401478 gacacggacaccg-acacgccgacacaactaaattttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgac 6401576  T
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6401577 acgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 30099105 - 30098976
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| |||||| |||||||||||| | |||| || ||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30099105 gacacgccgacacaactaaattttttaaacaatcgcataattctgtgtaattatatgtgtcggtgtcggatacgacacgtgtctgacacggggacacgcc 30099006  T
Q  259 ttatccaaggagtgtccgtgcttcatagtt 288  Q
    ||||||||||||||| |||||||| |||||    
T  30099005 ttatccaaggagtgttcgtgcttcgtagtt 30098976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 158 - 287
Target Start/End: Original strand, 21814252 - 21814392
Alignment:
Q  158 ggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatat-----------gtgtcggtgtcggacacgacacgtgtctgaca 246  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||| ||    
T  21814252 ggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggca 21814351  T
Q  247 cggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  21814352 cggggacacgccttatccaaggaatgttcgtgcttcatagt 21814392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 21576784 - 21576685
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| ||| ||||||||||| | |||||| |||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  21576784 aaaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 182 - 286
Target Start/End: Original strand, 42029767 - 42029871
Alignment:
Q  182 tttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    |||||||||||||| ||| || ||||||||||||| ||||||||||||||||||| |||||| ||||  |||||||||||||| |||||||||||||| |    
T  42029767 tttagaaaatcacataattcaatgtaattatatgtatcggtgtcggacacgacacatgtctgtcacgtagacacgccttatccgaggagtgtccgtgcat 42029866  T
Q  282 catag 286  Q
    |||||    
T  42029867 catag 42029871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 30502429 - 30502330
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||| ||||||||| ||| ||||||||||    
T  30502429 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 30542772 - 30542673
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |||| ||||||||| ||| ||||||||||    
T  30542772 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 146 - 284
Target Start/End: Complemental strand, 21191135 - 21190998
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    ||||||||||| | ||| || |||||||||||   ||| | ||||||||| ||| ||||||||||| | ||||||||||||||||| ||||||||| |||    
T  21191135 gacacggacactg-acatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgac 21191037  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
     | ||||||||||| |||| |||||||||||||||||||    
T  21191036 tccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 32426965 - 32426870
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 225  Q
    ||||||||  |||||||||||||||||||||| | | ||||| ||||||||||||||||||||||| ||| || ||||||||| ||||||||||||    
T  32426965 atgaagcatggatacggacacggacaccggacgcaccgacacggctaaattttttagaaaatcacataattcattgtaattatttgtgtcggtgtc 32426870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 43564901 - 43565000
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| |||  |||||||||||| ||||||||||||||||||||| ||||| ||| | ||||||||||| |||| || ||||||||||||||||||    
T  43564901 aaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 28588715 - 28588614
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||||||||| | ||||||||  |||||||| | |||| | |||||||| ||||||||    
T  28588715 agaaaatcacataattcagtgtaattataggtgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcat 28588616  T
Q  285 ag 286  Q
    ||    
T  28588615 ag 28588614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 19453125 - 19452998
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgacacgtgtctgacacggggacac 255  Q
    ||||||| |||||||||||||||||||||||||  |  ||||||||||||||||||||||           |||||||||| ||||| |||||| || ||    
T  19453125 gacacagttaaattttttagaaaatcacaaaatataccgtaattatatgtgtcggtgtcgtgtcaatgtcggacacgacacatgtctcacacggagatac 19453026  T
Q  256 gccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||||||||| ||||||||||||    
T  19453025 gccttatccaaggagcgtccgtgcttca 19452998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 17123066 - 17123169
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| |||  |||  |||||||| ||||||||| |||||||| || |||| |||||||| |||||||| |||| |||||||||||||||||||    
T  17123066 agaaaatcacataatcaagtacaattatatatgtcggtgttggacacgaaacatgtccgacacggg-acacgcctaatccgaggagtgtccgtgcttcat 17123164  T
Q  285 agttt 289  Q
    |||||    
T  17123165 agttt 17123169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 39268613 - 39268541
Alignment:
Q  211 atatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    |||||||||||||| |||||||||| ||||| ||||| ||||||||||| |||| ||||||||||||||||||    
T  39268613 atatgtgtcggtgttggacacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 21522809 - 21522880
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||| |||||| |||||||||||| ||||||    
T  21522809 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 21533375 - 21533446
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||| |||||| |||||||||||| ||||||    
T  21533375 gtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 39758272 - 39758327
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt 222  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  39758272 gacacagctaaattttttagaaaatcacataattcagtgtaattatatgtgtcggt 39758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 21542089 - 21542159
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||| ||||||||| |||||    
T  21542089 gtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 21194164 - 21194063
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    |||||||||||  || ||||||||||||| || | ||||| ||||||||||| |||| ||||| ||| ||||||| |||| |||||||||||||||| ||    
T  21194164 agaaaatcacatcattcagtgtaattataggtattggtgttggacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttat 21194065  T
Q  285 ag 286  Q
    ||    
T  21194064 ag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 157 - 286
Target Start/End: Original strand, 42893350 - 42893479
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 256  Q
    ||||||| | |||||||||||   ||| | ||||||||| ||| ||||||||||| | ||||||||||| ||||| ||||||||| |||||  |||||||    
T  42893350 cggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacacaacacgtgtccgacaccaggacacg 42893449  T
Q  257 ccttatccaaggagtgtccgtgcttcatag 286  Q
    ||| ||   |||||||||| ||||||||||    
T  42893450 cctaatatgaggagtgtccatgcttcatag 42893479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 201 - 273
Target Start/End: Original strand, 26312803 - 26312875
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 273  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||  |||||| ||| |||| ||||||||    
T  26312803 cagtgtaattatatgtatcggtgtcggacacgatacgtgtctgacaccaggacacacctaatccgaggagtgt 26312875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 159 - 286
Target Start/End: Original strand, 31084315 - 31084447
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcg-----gtgtcggacacgacacgtgtctgacacggggac 253  Q
    ||||||| |||||||||||   ||| | ||||||||| ||| || |||||||| | ||||||     ||||||||||||||||||||| ||||| |||||    
T  31084315 gacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacactgggac 31084414  T
Q  254 acgccttatccaaggagtgtccgtgcttcatag 286  Q
    | |||| |||| ||||||||||||| |||||||    
T  31084415 atgcctaatccgaggagtgtccgtggttcatag 31084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 39698600 - 39698672
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    ||||||||||||||||||||| || || ||||| | ||||||||| |||| ||||||||||||||||||||||    
T  39698600 gtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatagt 39698672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 14873535 - 14873641
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc-----ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 279  Q
    |||||| |||| |||  ||||||||||||||||||||||||     |||| | |||||||||  |||| ||||||||||| |||| ||||||||||||||    
T  14873535 agaaaagcacataatttagtgtaattatatgtgtcggtgtcatgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgc 14873634  T
Q  280 ttcatag 286  Q
    |||||||    
T  14873635 ttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 18421882 - 18421779
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggg----gacacgccttatccaaggagtgtccgtgct 280  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||| | ||| ||    |||||| || |||| ||||||||| |||||    
T  18421882 agaaaatcacataatccagtgtaattatatgtgtcggcgtcggacacgacacatgtccggcaccgggactgacacgtctaatccgaggagtgtctgtgct 18421783  T
Q  281 tcat 284  Q
    ||||    
T  18421782 tcat 18421779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 30098391 - 30098460
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagttta 290  Q
    ||||||||||||||||||||| |||||  |||||| ||| |||| |||| ||||||||||||||||||||    
T  30098391 gtgtcggacacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcatagttta 30098460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 23016030 - 23015926
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcg-----gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 279  Q
    ||||||||||| ||| ||||||||||||| ||||||     || |||||||||||| ||||| ||||  ||||||||||| |||| ||||||||||| ||    
T  23016030 agaaaatcacataattcagtgtaattataggtgtcgatgttgtatcggacacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagc 23015931  T
Q  280 ttcat 284  Q
    |||||    
T  23015930 ttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 43001859 - 43001922
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    |||||||||||||||||||||  ||||  |||||||||| |||| |||||||||||||||||||    
T  43001859 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 23012430 - 23012380
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggaca 254  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  23012430 tgtaattatatgtgtcggtgttggacacgacacatgtctgacaccgggaca 23012380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 27932253 - 27932354
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||| ||| ||| ||||||||||| |  | | |||||||||||||||||||||| |||||  |||||||||| || | ||||||||  |||||||||    
T  27932253 agaaaattacataattcagtgtaattacaaatcttggtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcat 27932352  T
Q  285 ag 286  Q
    ||    
T  27932353 ag 27932354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 282
Target Start/End: Original strand, 4105282 - 4105374
Alignment:
Q  190 atcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 282  Q
    |||||| ||| ||||||||||| | |||| ||| || ||| ||| | |||||||| || ||||||||||| |||| |||||||||||||||||    
T  4105282 atcacataattcagtgtaattacaagtgtaggtatcagactcgatatgtgtctgatactgggacacgcctaatccgaggagtgtccgtgcttc 4105374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 18592132 - 18592200
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||||||||||| ||||||||||||||  |||||||| || || | | ||||||||||||||||    
T  18592132 gtgtcggtgtcggacacaacacgtgtctgacatcgggacacggctaattcgatgagtgtccgtgcttca 18592200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 7677764 - 7677835
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||| |||||| ||| |||| ||||| ||||||||||| |||| ||||| ||| |||||||||||    
T  7677764 gtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 15382533 - 15382592
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    |||||||||| ||||||||||| |||| ||||| ||||||||||| |||| |||||||||    
T  15382533 gtgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 286
Target Start/End: Complemental strand, 32630802 - 32630675
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||||||||| | |||   ||| ||||||| | | ||| || |||||||||||||||| |||||||| |||||||||||| ||||  | ||||| ||    
T  32630802 gacacgctgacaccgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgtcggatacgacacgtgtccgacattgagacacacc 32630703  T
Q  259 ttatccaaggagtgtccgtgcttcatag 286  Q
    | || | |||||||||  ||||||||||    
T  32630702 taattcgaggagtgtctatgcttcatag 32630675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 3966521 - 3966562
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  3966521 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcg 3966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 146 - 286
Target Start/End: Original strand, 6770523 - 6770655
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    ||||||||||| | |||| |||||||| ||||   ||| ||||||||||| ||| ||||||| ||||  ||||| |||||||||||||||| ||||        
T  6770523 gacacggacactg-acacactgacacaactaataatttaagaaaatcacataattcagtgtacttat--gtgtcagtgtcggacacgacacatgtc---- 6770615  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
     | || |||||||| |||| | |||||||||||||||||||    
T  6770616 -ctggtacacgcctaatccgaagagtgtccgtgcttcatag 6770655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 15884008 - 15884057
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||||||    
T  15884008 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacac 15884057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 287
Target Start/End: Complemental strand, 16304438 - 16304365
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    |||||| || |||||||||||||||| | ||||| | |||||| || |||| |||| |||||||||||||||||    
T  16304438 tgtgtcagtatcggacacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcatagt 16304365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 19579760 - 19579829
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||| |||||||||||||||  ||||| |||| ||||||||||| |||| |||||||| |||| |||||    
T  19579760 gtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaatccgaggagtgtacgtgtttcat 19579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 16203836 - 16203785
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    |||||||| || |||  ||||||||||||||||||||||||||||| |||||    
T  16203836 agaaaatctcataatttagtgtaattatatgtgtcggtgtcggacaagacac 16203785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 23290049 - 23289998
Alignment:
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||| |||||||| || ||||||| | ||||||||||||||||    
T  23290049 acgtgtctgacaccgggacacgtctaatccaagcaatgtccgtgcttcatag 23289998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 32766943 - 32766872
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||| | |||||||||||| |||||  ||| ||| || |||  |||||||||||||||||||||    
T  32766943 gtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 34879340 - 34879415
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||| | ||| ||||||  ||| ||||||||| | ||| ||||||||| |||||||||| |||||||||||    
T  34879340 cggacacgccggcaccgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcgatgtcggacacg 34879415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 37328883 - 37328844
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||||| ||||||||||| ||||||||||||||    
T  37328883 aaaatcacaaaattcagtgtaattacatgtgtcggtgtcg 37328844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 41995534 - 41995581
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||| |||||| |||||||||| |||| |||||||||||||||||||    
T  41995534 gtgtcggacacgaggacacgcctaatcctaggagtgtccgtgcttcat 41995581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 3966562 - 3966632
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||||||||| ||| |||||  |||  |||||||| || |||| ||||||||||||||||||||    
T  3966562 gtgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 6247642 - 6247692
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacg 237  Q
    ||||||||| ||| ||||||||||| | |||||||||||||||||| ||||    
T  6247642 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacggcacg 6247692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 15382423 - 15382457
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  15382423 atgaagcacggatacggacacggacaccggacacg 15382457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 19820389 - 19820328
Alignment:
Q  222 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||   |||| ||||| ||||||||||| |||  |||||||||||||||||||||    
T  19820389 tgtcggacacgac---tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 226 - 284
Target Start/End: Complemental strand, 24238661 - 24238603
Alignment:
Q  226 ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||||||||  |||| |||||| || | |||| |||||||||||||||||||    
T  24238661 ggacacgacacgtgtccaacactgggacatgcataatcctaggagtgtccgtgcttcat 24238603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 35017125 - 35017163
Alignment:
Q  249 gggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  35017125 gggacacgcctaatccgaggagtgtccgtgcttcatagt 35017163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 36642757 - 36642696
Alignment:
Q  220 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 282  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||   ||||||||| |||||||    
T  36642757 ggtgtcggacacgacacgtgtccgacac-gggacacgcctaattggaggagtgtcggtgcttc 36642696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 6471930 - 6471889
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| |||||||||||||||||| |||||||    
T  6471930 agaaaatcacataattcagtgtaattatatgtgtgggtgtcg 6471889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 40000558 - 40000493
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||| || ||||| ||| ||||||| | |||||| ||||||  |||||||||||||||||||||    
T  40000558 gtgtcgtacgcgacatgtgcctgacaccgagacacgtcttatctgaggagtgtccgtgcttcatag 40000493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 41091298 - 41091257
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| |||||||||||||||||||| |||||    
T  41091298 agaaaatcacataattcagtgtaattatatgtgtcgatgtcg 41091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 10298633 - 10298669
Alignment:
Q  250 ggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| |||| |||||||||||||||||||||    
T  10298633 ggacacgcctaatccgaggagtgtccgtgcttcatag 10298669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 17088358 - 17088402
Alignment:
Q  234 cacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    |||||||| ||||| ||||||||||| |||| |||||||||||||    
T  17088358 cacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 22423800 - 22423764
Alignment:
Q  250 ggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| |||| |||||||||||||||||||||    
T  22423800 ggacacgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 203 - 286
Target Start/End: Original strand, 39205916 - 39206004
Alignment:
Q  203 gtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||| |||||||     ||||||||||||| | ||||| |||| |||  | ||||||||||||||  ||||||||||    
T  39205916 gtgtaattatatgtgttggtgtcgtgtccgacacgacacgtgcccgacaccgggatacgtttaatccaaggagtgtctatgcttcatag 39206004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 222 - 286
Target Start/End: Original strand, 40131687 - 40131751
Alignment:
Q  222 tgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||| ||||||||  ||||||||||  |||||||| ||  ||||||||||||||||| |||||||    
T  40131687 tgtcagacacgacttgtgtctgacattgggacacgtctactccaaggagtgtccgtgtttcatag 40131751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 2e-41; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 146 - 287
Target Start/End: Complemental strand, 5414251 - 5414100
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgac 234  Q
    ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||           ||||||||    
T  5414251 gacacggacac-ggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgac 5414153  T
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  5414152 acgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcatagt 5414100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 159 - 287
Target Start/End: Complemental strand, 23293053 - 23292925
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| |||||||||||   ||| | ||||||||| ||| |||| |||||| | ||||||||||||||||||||||||||| ||||| ||||||||||    
T  23293053 gacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcc 23292954  T
Q  259 ttatccaaggagtgtccgtgcttcatagt 287  Q
    | |||| ||||||||||||||||||||||    
T  23292953 taatccgaggagtgtccgtgcttcatagt 23292925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 19097941 - 19097835
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||||||||||  ||| |||| ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |||| ||||||| |||    
T  19097941 ttttttagaaaatcacgtaattcagtataattatatttgtcggtgtcgaacatgacacgtgtctgacacggggacacgcctta-ccaaagagtgtctgtg 19097843  T
Q  279 cttcatag 286  Q
    ||||||||    
T  19097842 cttcatag 19097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 159 - 286
Target Start/End: Original strand, 49431017 - 49431145
Alignment:
Q  159 gacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgc 257  Q
    ||||||| ||||||||||| | |||  | ||||||||| ||| ||||||||||| | |||||||||||||||||||||||||||  |||| |||||||||    
T  49431017 gacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcggacacgacacgtgtccaacaccgggacacgc 49431116  T
Q  258 cttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||| |||||||||| ||||| ||||    
T  49431117 cttatccgaggagtgtccatgctttatag 49431145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 187 - 288
Target Start/End: Complemental strand, 28964287 - 28964186
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| ||| ||||||||||| | ||||| |||||||||||||||| | || ||||| ||||||||||| |||| |||||||||| ||||||||||    
T  28964287 aaaatcacataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T
Q  287 tt 288  Q
    ||    
T  28964187 tt 28964186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 8423759 - 8423657
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| |||||||||||||  ||||||||||||||||||||  |||| ||||| ||||||||||| |||  || ||||||||||| ||||    
T  8423759 agaaaatcacataattcagtgtaattataaatgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcat 8423660  T
Q  285 agt 287  Q
    |||    
T  8423659 agt 8423657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 215 - 285
Target Start/End: Complemental strand, 30982878 - 30982808
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||||| |||||| ||||||||||||||||||    
T  30982878 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 167 - 287
Target Start/End: Complemental strand, 46084050 - 46083919
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgacacgtgtctgacacggggacac 255  Q
    ||||||||||| | |||||| |||||||| |||  |||||||||||||||||||||||||           ||||||||||||||||||| |||||||||    
T  46084050 gacacagctaattgttttagtaaatcacataatctagtgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtgtctgacgcggggacac 46083951  T
Q  256 gccttatccaaggagtgtccgtgcttcatagt 287  Q
    |||||||   |||||||||| |||||||||||    
T  46083950 gccttataagaggagtgtccatgcttcatagt 46083919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 203 - 286
Target Start/End: Complemental strand, 12895297 - 12895214
Alignment:
Q  203 gtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||| ||||||||||||||||||||| || || ||||  ||||||||||| |||| |||||||| ||||||||||||    
T  12895297 gtgtaattataagtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 34306843 - 34306744
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||| | |||| |||||||||| | ||||||||||||||||||||||||||| ||||| | ||||||||| |||  |||| ||| ||||||||||||    
T  34306843 aaaatcagataatgtagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 715646 - 715545
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtc--ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| ||| ||||||||||| | |||| ||||||  | ||||||||| |||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  715646 aaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 715547  T
Q  285 ag 286  Q
    ||    
T  715546 ag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 752972 - 752871
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtc--ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| ||| ||||||||||| | |||| ||||||  | ||||||||| |||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  752972 aaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 752873  T
Q  285 ag 286  Q
    ||    
T  752872 ag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 215 - 285
Target Start/End: Original strand, 12323968 - 12324038
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||||| ||||||||| || |||||| |||| |||||||| ||||||||||||||||||||    
T  12323968 gtgtcggtgtcggacatgacacgtgtgtggcacgggaacacaccttatccgaggagtgtccgtgcttcata 12324038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 24613700 - 24613630
Alignment:
Q  216 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| |||||||||||||||||||||  ||||||| || |||| |||||||||||||||||||||    
T  24613700 tgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcatag 24613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 187 - 296
Target Start/End: Complemental strand, 12797377 - 12797268
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||| || |||||||||| |||||| | || |||| |||| ||| |||||||| |||    
T  12797377 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgcttcgtag 12797278  T
Q  287 tttaggactt 296  Q
    | || |||||    
T  12797277 tatatgactt 12797268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 187 - 288
Target Start/End: Complemental strand, 35158024 - 35157923
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| |||  |||||||||||| ||||||||||| |||||||||| ||||  |||| || |||||| | |||| || ||||||||||||||||||    
T  35158024 aaaatcacataatttagtgtaattataagtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T
Q  287 tt 288  Q
    ||    
T  35157924 tt 35157923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 35161054 - 35161155
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||| || || | ||||||||||||||||||| ||||| || |||| ||| |||| |  ||||||||||||||||    
T  35161054 agaaaatcacataattcagtgtaattataagtatcagagtcggacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcat 35161153  T
Q  285 ag 286  Q
    ||    
T  35161154 ag 35161155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 2361999 - 2361915
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| | |||||||||||||||||||| |||||||||||| | ||||| ||| |||  | |||||||||||||||||||    
T  2361999 agtgtaattaaaagtgtcggtgtcggacacgactcgtgtctgacaccgagacacacctaatctgacgagtgtccgtgcttcatag 2361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 16073414 - 16073513
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||| || ||| ||||||||||| | ||||||||||||||||||| || |||| |||||   ||||||||| |||| |||||||||| ||||||||||    
T  16073414 aaaatcgcataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcatag 16073513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 36635342 - 36635449
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgt-cg-----gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||||| ||| |||||||||||||||||| ||     ||||| ||||||||||| ||| ||||| ||||||||||| |||| | |||||||||||    
T  36635342 agaaaatcacataattcagtgtaattatatgtgttcgtgtgagtgtcagacacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtg 36635441  T
Q  279 cttcatag 286  Q
    ||||||||    
T  36635442 cttcatag 36635449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 54580087 - 54580008
Alignment:
Q  162 acgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 241  Q
    ||||||||||| ||||   ||| | ||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  54580087 acgctgacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtc 54580008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 3947766 - 3947702
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||| |||||  |||||| ||| |||| ||||||||||||||||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 19482727 - 19482798
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||| | |||||||||||||||| ||||| ||||||| ||| |||| |||||||| ||||||||||||    
T  19482727 gtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 19482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 19500858 - 19500787
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||||||||||  ||||| || | | ||||||| ||||||||||| ||||||||||||||    
T  19500858 gtgtcggtgtcggacacgacacgcctctgataccgaggcacgcctaatccaaggagtatccgtgcttcatag 19500787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 848015 - 848080
Alignment:
Q  220 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||||||||||| |||||||  |||| ||||||| ||| |||||||||||||||||| ||||||    
T  848015 ggtgtcggacacgaaacgtgtcgaacaccgggacacacctaatccaaggagtgtccgtgtttcata 848080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 29205464 - 29205533
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 256  Q
    ||||||||| ||| ||||||||||| | |||||||||| ||||||||||| |||| ||||| ||||||||    
T  29205464 aaaatcacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtccgacaccgggacacg 29205533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 36509131 - 36509074
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctga 244  Q
    ||||||||| |||  |||||||||||||||||||| ||||||| ||||||||||||||    
T  36509131 aaaatcacataatcaagtgtaattatatgtgtcggcgtcggacgcgacacgtgtctga 36509074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 40179675 - 40179626
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  40179675 aaaatcacataattcagtgtaattatatgcgtcggtgtcggacacgacac 40179626  T

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Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 4672125 - 4672025
Alignment:
Q  186 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| ||| ||| |||||||  ||||||||||||||||||| || | ||||||  ||||| || ||| | || |||||||||||||| ||||||||||    
T  4672125 gaaaattacataattcagtgtagctatatgtgtcggtgtcggatacaaaacgtgttcgacactggaacatgtctaatccaaggagtgtctgtgcttcata 4672026  T
Q  286 g 286  Q
    |    
T  4672025 g 4672025  T

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Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 286
Target Start/End: Original strand, 29205527 - 29205587
Alignment:
Q  226 ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||| |||| ||||| ||||||||||| |||| |||||||| ||||||||||||    
T  29205527 ggacacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

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Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 53381602 - 53381530
Alignment:
Q  215 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||| ||| ||| || ||||| ||||||| ||| |||| |||||||||||||||||||||    
T  53381602 gtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 53381530  T

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Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 167 - 274
Target Start/End: Original strand, 21945503 - 21945610
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    |||||||||||   ||| | ||||| ||| ||| ||||||||||| | |||||||||||||||| ||||| |||| ||||| |  |||||||| |||| |    
T  21945503 gacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccga 21945602  T
Q  267 ggagtgtc 274  Q
    ||||||||    
T  21945603 ggagtgtc 21945610  T

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Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 283
Target Start/End: Original strand, 28084589 - 28084640
Alignment:
Q  232 gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    |||||||||| ||||| ||||||||||| |||| ||||||||||||||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 32273524 - 32273461
Alignment:
Q  223 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||| || || ||||||||||| |  |||||||||||||| |||||||||||    
T  32273524 gtcggacacgacacgtatccgatacggggacacgacaaatccaaggagtgtcggtgcttcatag 32273461  T

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Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 42640549 - 42640643
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||     |||| | |||  |||||||||| |||| |||||| ||||||||||||||    
T  42640549 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg-----tgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcatag 42640643  T

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Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 285
Target Start/End: Complemental strand, 20950458 - 20950368
Alignment:
Q  195 aaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||||||||||||||||||||||| ||||||| || |||   |||| |  |||||| | |||||||||||| |||| |||||||    
T  20950458 aaaattcagtgtaattatatgtgtcggtgtcagacacgatacatgttcaacacagaaacacgcataatccaaggagtgcccgtacttcata 20950368  T

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Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 40613442 - 40613504
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcgg 221  Q
    ||||||| ||||| |||||  |||| ||||||||||| ||| |||||||||||||||||||||    
T  40613442 gacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

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Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 4157169 - 4157266
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| |||  |||| ||||| | |||||||||||||||||||||| |||| ||||| | || || ||| || | ||||||||| |||||||||    
T  4157169 aaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

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Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 187 - 284
Target Start/End: Original strand, 4157456 - 4157553
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| |||  |||| ||||| | |||||||||||||||||||||| |||| ||||| | || |||||| || | |||||||||  ||||||||    
T  4157456 aaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcat 4157553  T

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Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 18966567 - 18966628
Alignment:
Q  225 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||| ||||||||| ||||  |||| |||||| ||| ||||||||||||||||||||||    
T  18966567 cggacacaacacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcatag 18966628  T

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Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 30298910 - 30299006
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| |||||||||||||||| | ||||||| ||||||||||| | |||  | ||||| ||| ||| ||||||||||| | ||||||||||||    
T  30298910 atgaagcacagatacggacacggaca-ctgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30299006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 30327778 - 30327874
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| |||||||||||||||| | ||||||| ||||||||||| | |||  | ||||| ||| ||| ||||||||||| | ||||||||||||    
T  30327778 atgaagcacagatacggacacggaca-ctgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30327874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 13783261 - 13783340
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| | |||| | ||||| ||||| | ||| |||| |||||||||| ||||||||||||||||| ||||||||    
T  13783261 gacacggacactg-acacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaattatatgtgccggtgtcg 13783340  T

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Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 14465070 - 14465006
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||||||||||||  ||||| |||||||| || |||  ||||||||||||||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 210 - 286
Target Start/End: Complemental strand, 23861445 - 23861369
Alignment:
Q  210 tatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||| || ||||||| |||||| |||   ||||||||| || ||| |||||| ||||||||||||    
T  23861445 tatatgtgtcggtgtcagatacgacacatgtctgtcaccaagacacgcctaattcaaagagtgttcgtgcttcatag 23861369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 24343560 - 24343632
Alignment:
Q  215 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||| ||||| ||| |||||| ||||| |||||||||||  ||  |||||||||||||||||||||    
T  24343560 gtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

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Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 10499311 - 10499260
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    ||||||||||| |||  |||||||||||||||||| ||||||||| ||||||    
T  10499311 agaaaatcacataatttagtgtaattatatgtgtcagtgtcggacccgacac 10499260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 16189710 - 16189773
Alignment:
Q  168 acacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    |||| ||||||  ||| ||||||||||| ||| |||||||||||| |||||||||| |||||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcggtgacggacac 16189773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 22234890 - 22234819
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||| ||||||||||||||| |||||  ||||||  || |||| || ||||| ||||||||||||    
T  22234890 gtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcatag 22234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 44132691 - 44132644
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||||||||  ||| |||| |||||||||||||||||||||    
T  44132691 ttttttagaaaatcacgtaattcagtataattatatgtgtcggtgtcg 44132644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 218 - 288
Target Start/End: Original strand, 903984 - 904054
Alignment:
Q  218 tcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagtt 288  Q
    ||||||| |||||||||| ||||| ||||| |||||||  || ||||||| | ||||| ||||||||||||    
T  903984 tcggtgttggacacgacatgtgtccgacactgggacacatctaatccaagaaatgtccttgcttcatagtt 904054  T

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Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 3064926 - 3064868
Alignment:
Q  228 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| |||| ||| | | ||||||||| |||| |||||||||||||||||||||    
T  3064926 acacgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcatag 3064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 8402783 - 8402721
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||| | ||| |||||||||||||||| || ||||| |||||||||| |||| |||||    
T  8402783 agaaaatcatataattcagtgtaattatatgtctcagtgtcagacacgacacttgtccgacac 8402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 9996858 - 9996920
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||||||| ||| |||| ||||||||||| |||||||| ||||  ||||||||| |||||    
T  9996858 agaaaatcacataattcagtataattatatgtctcggtgtcagacataacacgtgtccgacac 9996920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 23293099 - 23293065
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  23293099 atgaagcacagatacggacacggacaccggacacg 23293065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 287
Target Start/End: Complemental strand, 30103397 - 30103296
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| |||  |||||||| |||||||||||||||  ||||||||  |||||||||   ||||||  || |||| |||||||||  ||||||||    
T  30103397 agaaaatcacataatt-agtgtaatcatatgtgtcggtgtcaaacacgacatatgtctgacatcaggacacatctaatccgaggagtgtctctgcttcat 30103299  T
Q  285 agt 287  Q
    |||    
T  30103298 agt 30103296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 30838269 - 30838335
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    ||||| ||||||||| ||||||||||| |||||   ||||||||| | || ||||||||||||||||    
T  30838269 gtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 5775341 - 5775304
Alignment:
Q  249 gggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  5775341 gggacacgcctaatccgaggagtgtccgtgcttcatag 5775304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 6879532 - 6879459
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||| |||| ||| ||||||||   ||||||||| |||  |||||||||| | ||||||||||||||||||    
T  6879532 gacacgccgacatagcaaaatttttggaaaaatcacataattaagtgtaattacaagtgtcggtgtcggacacg 6879459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 226
Target Start/End: Complemental strand, 12895210 - 12895116
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| |||||||||||||||||  ||||||| || ||||||||   ||| | ||||||||| ||| ||  ||||||| | ||||||||||||    
T  12895210 atgaagcacagatacggacacggacac--gacacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcg 12895116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 22440608 - 22440559
Alignment:
Q  235 acgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||| |||||  |||||||||| |||| |||||||||||||||||||    
T  22440608 acgtgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 42014965 - 42015022
Alignment:
Q  174 ctaaattttttagaaaatcaca-aaatgcagtgtaattatatgtgtcggtgtcggaca 230  Q
    ||||| |||| ||| ||||||| |||| |||||||||||||||||| |||||||||||    
T  42014965 ctaaaattttgagataatcacataaattcagtgtaattatatgtgttggtgtcggaca 42015022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 5775399 - 5775359
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtc 225  Q
    ||||||||||| |||  ||||||||||||||||||||||||    
T  5775399 agaaaatcacataattaagtgtaattatatgtgtcggtgtc 5775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 13307885 - 13307957
Alignment:
Q  175 taaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    |||| |||| ||||||| ||| ||| || |||||| | | |||| |||||||||||||||||||||| |||||    
T  13307885 taaaattttgagaaaatgacataattcaatgtaatcacaagtgttggtgtcggacacgacacgtgtcagacac 13307957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 287
Target Start/End: Complemental strand, 15724554 - 15724482
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    ||||||||||||||||| ||||||||| |||||    |||||||| |||| |||||| |  ||||||||||||    
T  15724554 gtgtcggtgtcggacacaacacgtgtcagacaccaaaacacgcctaatccgaggagtttatgtgcttcatagt 15724482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 143 - 226
Target Start/End: Complemental strand, 22234973 - 22234890
Alignment:
Q  143 acggacacggacaccggacacgctgacacagctaaattttttagaaaa-tcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||| |||||||| |||||||| ||||| ||||||  ||| | |||| ||||| ||| |||||||||| |||||||||||||||    
T  22234973 acggatacggacac-ggacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcg 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 40784028 - 40784072
Alignment:
Q  242 tgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||| ||||||| ||| |||| |||||||||||||||||||||    
T  40784028 tgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 40784072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 3e-40; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 159 - 286
Target Start/End: Original strand, 18367828 - 18367966
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgt-----------cggtgtcggacacgacacgtgtctgacac 247  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||           ||||||| |||||||||| ||||||||||    
T  18367828 gacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacac 18367927  T
Q  248 ggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18367928 ggggacacgccttatccaaggagtgtccgtgcttcatag 18367966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 158 - 287
Target Start/End: Complemental strand, 16488658 - 16488518
Alignment:
Q  158 ggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----------gacacgacacgtgtctgaca 246  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||||| ||    
T  16488658 ggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggca 16488559  T
Q  247 cggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  16488558 cggggacacgccttatccaaggaatgttcgtgcttcatagt 16488518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 146 - 286
Target Start/End: Original strand, 13789134 - 13789273
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    |||||||||| || |||||  ||||||||||||||||| | ||||||| |||||||||||||||||||||| ||  ||||||||| ||||||||||||||    
T  13789134 gacacggacatcg-acacgtcgacacagctaaatttttaaaaaaatcataaaatgcagtgtaattatatgtatcaatgtcggacatgacacgtgtctgac 13789232  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    | ||||| ||||||||| |||||||||| ||||||||||||    
T  13789233 atggggatacgccttattcaaggagtgttcgtgcttcatag 13789273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 146 - 286
Target Start/End: Original strand, 13797753 - 13797892
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    |||||||||| || |||||  ||||||||||||||||| | ||||||| |||||||||||||||||||||| ||  ||||||||| ||||||||||||||    
T  13797753 gacacggacatcg-acacgtcgacacagctaaatttttaaaaaaatcataaaatgcagtgtaattatatgtatcaatgtcggacatgacacgtgtctgac 13797851  T
Q  246 acggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    | ||||| ||||||||| |||||||||| ||||||||||||    
T  13797852 atggggatacgccttattcaaggagtgttcgtgcttcatag 13797892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 130 - 285
Target Start/End: Complemental strand, 17841684 - 17841530
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||   ||| | ||||||||| |||  |||||||||| | ||| |||||||||||    
T  17841684 atgaagcactgatacggacacggacactg-acacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcggac 17841586  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| ||||| ||||| | ||||||||| |||| ||||||||||||||||||||    
T  17841585 acgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 34595154 - 34595253
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||||||    
T  34595154 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 130 - 287
Target Start/End: Original strand, 28152063 - 28152218
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| |||| |||||||||||| | |||||| |||| ||||||   ||| | ||||||||| ||| ||||||||||| | |||||||||||||||    
T  28152063 atgaagcacggatatggacacggacactg-acacgccgacaaagctaataatttga-aaaatcacataattcagtgtaattacaagtgtcggtgtcggac 28152160  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    |||||||||||| ||||| |||||| |||| |||| |||||||| |||||||||||||    
T  28152161 acgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatagt 28152218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 146 - 285
Target Start/End: Original strand, 9658859 - 9658998
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgac 245  Q
    ||||||||||| | |||||| ||||| |||||   ||| ||||||||||| ||| |||||||||||||| |||||||||  |||||||||||||||||||    
T  9658859 gacacggacactg-acacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgttagacacgacacgtgtctgac 9658957  T
Q  246 acggggacacgcctta-tccaaggagtgtccgtgcttcata 285  Q
    || || |||||||| | ||||||||||||||||||||||||    
T  9658958 accggaacacgcctaattccaaggagtgtccgtgcttcata 9658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 162 - 286
Target Start/End: Complemental strand, 17327719 - 17327590
Alignment:
Q  162 acgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtc-----ggtgtcggacacgacacgtgtctgacacggggacacg 256  Q
    |||| |||||| ||||  |||| ||||||||||| |||  ||||||| ||||||||||      ||||||||||||||||||||||||||| ||||||||    
T  17327719 acgccgacacaactaagattttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcggacacgacacgtgtctgacacagggacacg 17327620  T
Q  257 ccttatccaaggagtgtccgtgcttcatag 286  Q
    ||| |||| |||||||||||||||||||||    
T  17327619 cctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 157 - 283
Target Start/End: Complemental strand, 32978969 - 32978842
Alignment:
Q  157 cggacacgctgacacagctaa-attttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacac 255  Q
    ||||||||| ||||||||||| | |||  | |||| |||| |||  |||||||||| | |||||||||||||||||||||| |||| ||||| |||||||    
T  32978969 cggacacgccgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacac 32978870  T
Q  256 gccttatccaaggagtgtccgtgcttca 283  Q
    | || |||||||||||||||||||||||    
T  32978869 gtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 283
Target Start/End: Complemental strand, 7996419 - 7996325
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||| | ||| ||||||||||||||| ||||||||||    |||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  7996419 agaaaatcatataattcagtgtaattatatgcgtcggtgtcg----cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 7996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 283
Target Start/End: Original strand, 8022382 - 8022476
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||||||| | ||| ||||||||||||||| ||||||||||    |||||||||||| |||||||||||||||| ||||||||||| |||||||||||    
T  8022382 agaaaatcatataattcagtgtaattatatgcgtcggtgtcg----cgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 8022476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 7377979 - 7378098
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    ||||| ||||||  ||| ||||||||||| ||| || |||||||||||||||||||||||||||||||| |  || ||||| |||||||| || |||  |    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacgacatgcatccgacaccgggacacggctaatctga 7378078  T
Q  267 ggagtgtccgtgcttcatag 286  Q
    | ||||||||||||||||||    
T  7378079 gaagtgtccgtgcttcatag 7378098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 12696383 - 12696446
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  12696383 gtgtcggacacgacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 33001328 - 33001229
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| |||  | |||||||||||||||||||||||||||||||||||||||||||| |  | |||||| |||||| ||||||  |||||||||||    
T  33001328 aaaatcacataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgtctgacaccgaaatacgcctaatccaaagagtgtttgtgcttcatag 33001229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 134 - 236
Target Start/End: Complemental strand, 5626792 - 5626686
Alignment:
Q  134 agcactgatacggacacggacac----cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||| |||||||||||||||||    | ||||||| |||||| |||| ||||||||||||||||  | | |||||||| ||||||||||||||||||||    
T  5626792 agcacggatacggacacggacacgacactgacacgccgacacaactaatttttttagaaaatcacttagttcagtgtaaatatatgtgtcggtgtcggac 5626693  T
Q  230 acgacac 236  Q
    |||||||    
T  5626692 acgacac 5626686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 7265634 - 7265535
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||| | || |||| ||||| || | | |||| |||| ||||| |||||||||||||    
T  7265634 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaatacatgtccgacaccggaatatgcctaatccgaggagcgtccgtgcttcat 7265535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 8365519 - 8365448
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| |||| |||||| ||||||||||||||    
T  8365519 gtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 10339125 - 10339054
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||| |||  |||||||||||||||||||||    
T  10339125 gtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 185 - 288
Target Start/End: Complemental strand, 13360413 - 13360311
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| |||||||||||||||| |||||||| ||||| |||  |||| ||||| | ||||||||| |||| | |||||||||||||||||    
T  13360413 agaaaatcacataattcagtgtaattatatgtttcggtgtcagacacaaca-atgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcat 13360315  T
Q  285 agtt 288  Q
    ||||    
T  13360314 agtt 13360311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 187 - 286
Target Start/End: Original strand, 28715315 - 28715414
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| ||| ||| ||||||||||| | ||||||||||||||||||||||||||  ||||| ||||||||||| || | || ||||| ||||||||||||    
T  28715315 aaaatgacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcatag 28715414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 185 - 288
Target Start/End: Complemental strand, 32511707 - 32511604
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||||||||||| |||| ||||||||| ||||||  |||||||||  ||  ||||||| |||  |||||||||||||||||||    
T  32511707 agaaaatcacataattcagtgtaattataagtgttggtgtcggatacgacatatgtctgacatcggagcacgcctaatcggaggagtgtccgtgcttcat 32511608  T
Q  285 agtt 288  Q
    ||||    
T  32511607 agtt 32511604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 146 - 286
Target Start/End: Complemental strand, 8777052 - 8776908
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacg-----tgt 240  Q
    ||||||||||| | |||||| |||||| ||||   ||| | ||||||||||||| ||||||||||| | |||| ||||||||||||||||||     |||    
T  8777052 gacacggacactg-acacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacgacacgacacgtgt 8776954  T
Q  241 ctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    | ||||| | ||||| ||| |||| |||||||||||||||||||||    
T  8776953 ccgacaccgagacacacctaatccgaggagtgtccgtgcttcatag 8776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 206 - 286
Target Start/End: Original strand, 4877982 - 4878061
Alignment:
Q  206 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||| | |||||||||||||||||||||| |||| ||||| || |||||||| |||| |||||||||||||||||||||    
T  4877982 taattacaagtgtcggtgtcggacacgacacatgtccgacacagg-acacgcctaatccgaggagtgtccgtgcttcatag 4878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 31384984 - 31385048
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||| ||||||||||||||||  |||| ||||||||||| |||||||||||||||||||||||||    
T  31384984 gtgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 16766756 - 16766827
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||| |||| | || ||||||||||||||||    
T  16766756 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 286
Target Start/End: Complemental strand, 13364746 - 13364645
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| | ||| ||||||||| |||||||||||||| |||||||| || ||||||||||  ||||||| ||  ||| | ||||||| |||||||||    
T  13364746 agaaaatcatataattcagtgtaatcatatgtgtcggtgttggacacgatacatgtctgacaccaggacacgtctattccgacgagtgtctgtgcttcat 13364647  T
Q  285 ag 286  Q
    ||    
T  13364646 ag 13364645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 19040344 - 19040421
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    ||||||| ||||| |||||   ||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  19040344 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacgacac 19040421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 7740660 - 7740712
Alignment:
Q  186 gaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgt 238  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  7740660 gaaaatcacaaaattgagtgtaattatatgtgtcagtgtcggacacgacacgt 7740712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 286
Target Start/End: Original strand, 4388088 - 4388199
Alignment:
Q  170 acagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaagga 269  Q
    ||||| || ||||||||||||||||| ||| ||| ||||||||||||||| ||||||    ||    |||||||||||| ||||||||||||||| || |    
T  4388088 acagccaatttttttagaaaatcacataatccagggtaattatatgtgtcagtgtcgtgg-cg----gtgtctgacacgaggacacgccttatccgagaa 4388182  T
Q  270 gtgtccgtgcttcatag 286  Q
    ||||| |||||||||||    
T  4388183 gtgtctgtgcttcatag 4388199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 286
Target Start/End: Complemental strand, 7977897 - 7977770
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| |||||||||||   ||| | ||||| ||| ||| ||||||||||| | ||||||||||||||||| |||  |||| ||||  |  |||||||    
T  7977897 gacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacacaacatatgtccgacaacgaaacacgcc 7977798  T
Q  259 ttatccaaggagtgtccgtgcttcatag 286  Q
    | ||| ||||||||| ||||||||||||    
T  7977797 taatctaaggagtgttcgtgcttcatag 7977770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 30851637 - 30851676
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctg 243  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30851637 tgtaattatatgtgtcggtgtcggacacgacacgtgtctg 30851676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 187 - 288
Target Start/End: Original strand, 24645501 - 24645602
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||| ||| |||| || ||| | ||||||||||| ||||||||||||||| |||||   |||||| || |||| | ||||||| |||||||||||    
T  24645501 aaaatcacataattcagtatagttacaagtgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcatag 24645600  T
Q  287 tt 288  Q
    ||    
T  24645601 tt 24645602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 26562679 - 26562748
Alignment:
Q  157 cggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| ||||| ||||||  ||| ||||||||||| ||| |||||||||||||||||||| |||||    
T  26562679 cggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcg 26562748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 34446618 - 34446691
Alignment:
Q  215 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    |||||||||||  |||| ||| ||| |||||||| ||||||| ||| |||||||||||||||||||||||||||    
T  34446618 gtgtcggtgtccaacaccgacgcgtatctgacactgggacacacctaatccaaggagtgtccgtgcttcatagt 34446691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 129
Target Start/End: Original strand, 7041466 - 7041574
Alignment:
Q  21 taaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaactcgt 120  Q
    |||||||||||| ||||||||| | |||  |||| || ||||||||  |||| ||||||||| | |  ||||| ||||||||||||||||| ||||| ||    
T  7041466 taaagatgacacaattccctttggcaacgcacaaatccgaagcagaaacagagaacgaacatacttctcccaagaacaaaaccctatcccctaaactagt 7041565  T
Q  121 caatttcac 129  Q
    ||| |||||    
T  7041566 caacttcac 7041574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 7248417 - 7248489
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    |||||||||| |||||| ||| ||||| ||||| |||||||| |  |||| ||||||||||||||||||||||    
T  7248417 gtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatagt 7248489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 9107370 - 9107299
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||| ||  ||||| ||||| ||||||| ||| |||| ||||||| |||||||||||||    
T  9107370 gtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 9025535 - 9025494
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  9025535 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 9629448 - 9629517
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagttta 290  Q
    ||||||||||| ||| ||||| ||||| | |||||| || |||| |||||||||| ||||||||||||||    
T  9629448 gtgtcggacacaacatgtgtccgacactgagacacgtctaatccgaggagtgtccatgcttcatagttta 9629517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 286
Target Start/End: Original strand, 16833267 - 16833427
Alignment:
Q  130 atgaagcactgatacggacacggacaccg-----gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 224  Q
    |||||||||||||||||||||| |||| |     ||||||| |||||| ||||   ||| | ||||||||| | | ||||||||||| | ||||||||||    
T  16833267 atgaagcactgatacggacacg-acacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgt 16833365  T
Q  225 cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
      ||||||||||| ||| |||||  |||||| ||  |||| ||||||||| || ||||||||    
T  16833366 tagacacgacacgcgtccgacaccaggacacaccgaatccgaggagtgtctgtacttcatag 16833427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 31579266 - 31579212
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtc 241  Q
    ||||||||||| ||| ||||||||||||  |||||||||||||||||||||| ||||    
T  31579266 agaaaatcacataattcagtgtaattat--gtgtcggtgtcggacacgacacatgtc 31579212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 4118444 - 4118412
Alignment:
Q  132 gaagcactgatacggacacggacaccggacacg 164  Q
    |||||||||||||||||||||||||||||||||    
T  4118444 gaagcactgatacggacacggacaccggacacg 4118412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 286
Target Start/End: Complemental strand, 6898305 - 6898221
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| | |||||||||||||||||||  ||||||  |||| |  |||||||| |||| | |||||| ||||||||||||    
T  6898305 agtgtaattacaagtgtcggtgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcatag 6898221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 10649371 - 10649407
Alignment:
Q  250 ggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10649371 ggacacgcctaatccaaggagtgtccgtgcttcatag 10649407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 853898 - 853811
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    ||||||||| |||  |||| ||||| | |||||||||||||| |||||| ||||| ||||  | ||||||||| |||||| |||||||    
T  853898 aaaatcacataattaagtgcaattacaagtgtcggtgtcggatacgacatgtgtccgacatagagacacgcctaatccaatgagtgtc 853811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 3209447 - 3209518
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| |||||| |||||||||| ||| |||||  |||||||||| |||| ||||||||  |||||||||||    
T  3209447 gtgtcagtgtcgaacacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 5732551 - 5732504
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||||| | |  |||||||||||||||||||||||||||||||    
T  5732551 agaaaatcacatattttagtgtaattatatgtgtcggtgtcggacacg 5732504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 226
Target Start/End: Original strand, 7027262 - 7027301
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| ||| ||||||||||||||||||||||||||    
T  7027262 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 8714039 - 8714110
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||||||||| | || ||||  ||||||||||  |||| |||||||||  ||||||||||    
T  8714039 gtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgtctttgcttcatag 8714110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 164
Target Start/End: Original strand, 7938062 - 7938096
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg 164  Q
    ||||||||| |||||||||||||||||||||||||    
T  7938062 atgaagcacggatacggacacggacaccggacacg 7938096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 8931668 - 8931602
Alignment:
Q  160 acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||||| ||||||||||||  ||| ||||||| ||| ||| |||| ||||||||||||||| |||||    
T  8931668 acacgccgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcg 8931602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 9107436 - 9107370
Alignment:
Q  160 acacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||||| |||||||||||   ||| | ||||||||||||| ||||||||||| | ||||||||||||    
T  9107436 acacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 9629401 - 9629443
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgg 227  Q
    ||||||||||| ||| || ||||||||||||||||||||||||    
T  9629401 agaaaatcacataattcaatgtaattatatgtgtcggtgtcgg 9629443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 201 - 231
Target Start/End: Complemental strand, 21924960 - 21924930
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacac 231  Q
    |||||||||||||||||||||||||||||||    
T  21924960 cagtgtaattatatgtgtcggtgtcggacac 21924930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 31959214 - 31959268
Alignment:
Q  231 cgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||| ||||| ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  31959214 cgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 7012784 - 7012845
Alignment:
Q  21 taaagatgacacgattccctttagtaacagacaactcagaagcagaggcagaaaacgaacat 82  Q
    |||||||||||  ||||||||| | |||| |||| || |||||| |||||||||||||||||    
T  7012784 taaagatgacagaattccctttggcaacacacaaatccgaagcacaggcagaaaacgaacat 7012845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 7029850 - 7029891
Alignment:
Q  88 ccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 129  Q
    |||||| ||||||||||||||||| ||||||||||| |||||    
T  7029850 ccccaagaacaaaaccctatccccgaaactcgtcaacttcac 7029891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 7938170 - 7938219
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| ||||| | ||||||||| |||| |||||||||||||||||||||    
T  7938170 gtgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttcatag 7938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 283
Target Start/End: Complemental strand, 8389513 - 8389411
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattata-tg---tgtcggtgtcggacacgacac-gtgtctgacacggggacacgccttatccaaggagtgtccgtgc 279  Q
    ||||||||| | ||| ||||||||||||| ||   |||||||||||||| | |||| ||||| ||||| ||||||| ||| |||| ||||||||||||||    
T  8389513 agaaaatcatataattcagtgtaattatagtgtcatgtcggtgtcggac-caacacggtgtccgacaccgggacacacctaatccgaggagtgtccgtgc 8389415  T
Q  280 ttca 283  Q
    ||||    
T  8389414 ttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 9159574 - 9159533
Alignment:
Q  88 ccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 129  Q
    |||||| ||||||||||||||||| |||||||| ||||||||    
T  9159574 ccccaagaacaaaaccctatcccctaaactcgttaatttcac 9159533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 129
Target Start/End: Original strand, 9170854 - 9170895
Alignment:
Q  88 ccccaaaaacaaaaccctatcccccaaactcgtcaatttcac 129  Q
    |||||| ||||||||||||||||| |||||||| ||||||||    
T  9170854 ccccaagaacaaaaccctatcccctaaactcgttaatttcac 9170895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 9617452 - 9617493
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| || |||||||||||||||||||||||    
T  9617452 agaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 29020932 - 29020985
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgt 240  Q
    |||||| || ||| ||||||||||||| ||||  ||||||||||||||||||||    
T  29020932 aaaatcgcataattcagtgtaattataggtgtttgtgtcggacacgacacgtgt 29020985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 1191759 - 1191679
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    |||||||||||   ||| | ||| ||||||||| ||||||||||| | |||||| ||| ||||||||| |||||| |||||    
T  1191759 gacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcgatgttggacacgacgcgtgtccgacac 1191679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 1700372 - 1700416
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacac 231  Q
    ||||||||| | | ||||||||||||| |||||||||||||||||    
T  1700372 aaaatcacatatttcagtgtaattataagtgtcggtgtcggacac 1700416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 5970215 - 5970183
Alignment:
Q  130 atgaagcactgatacggacacggacaccggaca 162  Q
    ||||||||| |||||||||||||||||||||||    
T  5970215 atgaagcacagatacggacacggacaccggaca 5970183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 9027158 - 9027237
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| | |||||| ||||| |||||   ||| ||| ||||||| ||| | ||||||||||||||||||||||||    
T  9027158 gacacggacactg-acacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcg 9027237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 9522949 - 9523001
Alignment:
Q  214 tgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    |||||||||||||||  ||||||||||| ||||| | ||||||||| ||||||    
T  9522949 tgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaatccaa 9523001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 221 - 281
Target Start/End: Original strand, 24138485 - 24138545
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    |||| ||||| |||||||||||||||| | |||| |||| |||| | ||||||||||||||    
T  24138485 gtgttggacatgacacgtgtctgacacagagacatgcctaatccgaagagtgtccgtgctt 24138545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 8e-35; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 18213080 - 18212973
Alignment:
Q  179 ttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| ||||||||| |||    
T  18213080 ttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcggacacgacccctttctgacacggggacacgccttatccgaggagtgtctgtg 18212981  T
Q  279 cttcatag 286  Q
    ||||||||    
T  18212980 cttcatag 18212973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 174 - 283
Target Start/End: Original strand, 39138451 - 39138560
Alignment:
Q  174 ctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgt 273  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| || ||||| ||||||||||||||||||||| | |||| |    
T  39138451 ctaaattttttagaaaatcacataattcagtgtaattatatatgtcggtgtcggacacgatacatgtctaacacggggacacgccttatcccaagagtat 39138550  T
Q  274 ccgtgcttca 283  Q
    | ||||||||    
T  39138551 ctgtgcttca 39138560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 130 - 286
Target Start/End: Original strand, 15680773 - 15680928
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| |||||||||| |||||| | |||||| |||| ||||||   ||  | ||||||||| |||  |||||||||||| |||||||||||||||    
T  15680773 atgaagcacggatacggacatggacactg-acacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcggac 15680871  T
Q  230 acgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||| ||||| | |||||| || || | |||||||||||||||||||||    
T  15680872 acgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 32287504 - 32287404
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||| ||||| || ||||||||||||||||||||| |||| ||||| ||||| ||||||| ||| |||| |||||||||||||||||||    
T  32287504 agaaaatcacataattcagtgcaagtatatgtgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 32287405  T
Q  285 a 285  Q
    |    
T  32287404 a 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 130 - 286
Target Start/End: Original strand, 9778454 - 9778624
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacg---------ctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcg 220  Q
    ||||||||| |||||||||||||||||||||||||         ||||||||||| |   ||| | ||||||||| ||| |||| |||||| | ||||||    
T  9778454 atgaagcacggatacggacacggacaccggacacgacacggacactgacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcg 9778553  T
Q  221 gtgt-----cggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||     ||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||    
T  9778554 gtgtcgtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 21880170 - 21880271
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||| ||| ||| ||||||||||| | |||||||||||||||||||||| |||| |||||  |||||||||| |||| || ||||||||||||||||    
T  21880170 agaaaattacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcat 21880269  T
Q  285 ag 286  Q
    ||    
T  21880270 ag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 159 - 286
Target Start/End: Complemental strand, 5409903 - 5409771
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggggac 253  Q
    |||||||||| ||||||||   ||| | ||||||||| ||| ||||| ||||| | ||||||||||||     ||||||||||||||| ||||| |||||    
T  5409903 gacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggac 5409804  T
Q  254 acgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||| |||| |||||||||||||||||||||    
T  5409803 acgcctaatccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 20549809 - 20549909
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||| |||| |||| ||||  | ||||||||| |||| ||||||| |||||||||||    
T  20549809 agaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcat 20549908  T
Q  285 a 285  Q
    |    
T  20549909 a 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 598245 - 598327
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||| || ||||||||||| ||||||||||||||| ||||| ||||||||||| |||| || ||||||||||||||||||    
T  598245 tgtaattgtaagtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 43027508 - 43027404
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    ||||||||| |||||||||||| || | ||||||||||||     ||||||||||||||| ||||| ||||||||||| |||| | ||||||||||||||    
T  43027508 aaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgctt 43027409  T
Q  282 catag 286  Q
    |||||    
T  43027408 catag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 24339701 - 24339772
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||||||||||| || ||||| ||||||||||| |||| ||||||| |||||||||||||    
T  24339701 gtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 21864843 - 21864927
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| | |||||| |||||||||||||||||||| ||||| |||||||| || || | ||||||||| |||||||||||    
T  21864843 agtgtaattacaagtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 32094020 - 32093952
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacac-ggggacacgccttatccaaggagtgtccgtgcttcatagtt 288  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||| |||||||| ||||||||||||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatagtt 32093952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 25822717 - 25822786
Alignment:
Q  218 tcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    ||||| |||||||||||||||||||||||  |||||| |||| ||| |||||||||||||| ||||||||    
T  25822717 tcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcatagt 25822786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 5835265 - 5835337
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgc 257  Q
    ||||||| ||| ||| ||||||||||||||||||||||||| |||| |||| |||||||| || |||||||||    
T  5835265 agaaaataacataattcagtgtaattatatgtgtcggtgtcagacatgacatgtgtctgataccgggacacgc 5835337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 9482952 - 9483003
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  9482952 agaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacgcgacac 9483003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 12278853 - 12278943
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggaca-cgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 275  Q
    ||||||| ||| ||| ||||||||||||||||||| |||||||||| | || |||||||||||| ||||||| ||| |||| ||||||||||    
T  12278853 agaaaatgacataattcagtgtaattatatgtgtc-gtgtcggacaccaacgcgtgtctgacaccgggacacacctaatcctaggagtgtcc 12278943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 26733324 - 26733411
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtc 274  Q
    ||||||||| ||| |||| |||||| |||||||||||||||||||||| | |||| || ||||| |||||||| |||| ||| |||||    
T  26733324 aaaatcacataattcagtctaattaaatgtgtcggtgtcggacacgacgcatgtccgatacgggaacacgcctaatccgaggggtgtc 26733411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 286
Target Start/End: Original strand, 33994236 - 33994331
Alignment:
Q  191 tcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| ||| ||||| ||||| | ||||||||||| |||||||||| ||||  |||| | ||||||||| ||||||||||||| |||| |||||||    
T  33994236 tcacataattcagtgcaattacaagtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcatag 33994331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 285
Target Start/End: Original strand, 22484017 - 22484143
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| ||||| |||||   |||||||||||  || ||| |||| |||||||||||||||||||| |||| ||||| |||| ||||  | |||| | |    
T  22484017 gacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtcagacatgacacatgtccgacatcgagacatgtc 22484116  T
Q  259 ttatccaaggagtgtccgtgcttcata 285  Q
    | |||| || |||||||||||||||||    
T  22484117 tgatccgagaagtgtccgtgcttcata 22484143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 286
Target Start/End: Original strand, 1433490 - 1433578
Alignment:
Q  203 gtgtaattatatgtgtcggtgtcg-----gacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||||||||||     |||| |||| ||||| |||||  ||||||| || |||| |||||||||||||||||||||    
T  1433490 gtgtaattatatgtgtcggtgtcgtgtcggacaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 285
Target Start/End: Complemental strand, 18035909 - 18035806
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgct 280  Q
    |||||| |||||||| ||| ||| ||||||| ||||||| ||||  || | ||||| |||||||||| || ||||| || |||| |||||||||||||||    
T  18035909 ttttaggaaatcacataattcagcgtaattacatgtgtcagtgtgagataggacacatgtctgacac-ggaacacgtctaatccgaggagtgtccgtgct 18035811  T
Q  281 tcata 285  Q
    |||||    
T  18035810 tcata 18035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 7133285 - 7133210
Alignment:
Q  214 tgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagtt 288  Q
    |||||||||||||||||| ||| |||||| ||||| ||||||| ||| |||  ||||| |||||||||||||||||    
T  7133285 tgtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatagtt 7133210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 286
Target Start/End: Complemental strand, 21568692 - 21568561
Alignment:
Q  156 ccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggaca-cgacacgtgtctgacacggggaca 254  Q
    |||||||||||||||| |||||   ||| |||||||| || |||  |||||||| ||||| |||||||||||| | | || |||||| ||||| ||||||    
T  21568692 ccggacacgctgacacggctaataatttaagaaaatctcataattaagtgtaatcatatgagtcggtgtcggataccaacgcgtgtcggacaccgggaca 21568593  T
Q  255 cgccttatccaaggagtgtccgtgcttcatag 286  Q
     || | |||  ||||||||| |||||||||||    
T  21568592 tgcttaatctgaggagtgtctgtgcttcatag 21568561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 159 - 286
Target Start/End: Original strand, 25481894 - 25482021
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgcc 258  Q
    ||||||| |||||||||||   ||| | ||||||||| ||| ||||||||||| | |||| |||||||||||||| | ||||| ||||  |  ||||||     
T  25481894 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacgatatgtgtccgacattgaaacacgct 25481993  T
Q  259 ttatccaaggagtgtccgtgcttcatag 286  Q
    | || ||| |||| ||||||||||||||    
T  25481994 taattcaaagagtatccgtgcttcatag 25482021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 187 - 278
Target Start/End: Original strand, 41020516 - 41020607
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtg 278  Q
    ||||||||| |||  |||||||||||||| |||||||| | ||||||||| | ||| |||| |||||||| || |||||| || ||||||||    
T  41020516 aaaatcacataatttagtgtaattatatgcgtcggtgttgaacacgacacatatctaacaccgggacacgtctaatccaaagaatgtccgtg 41020607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 286
Target Start/End: Original strand, 1401043 - 1401142
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||| ||||| ||| ||||||||||||| || |||||||| |||||||||  |||| ||||  ||||||| ||| |||  |||||||||| ||||||||    
T  1401043 agaaactcacataattcagtgtaattataagtatcggtgtccgacacgaca--tgtccgacatcgggacacacctaatctgaggagtgtccatgcttcat 1401140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 7438766 - 7438836
Alignment:
Q  216 tgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||  ||||||||| |||  |||||  |||||||||| || |||||||||||||||||||||||    
T  7438766 tgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcatag 7438836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 27093454 - 27093364
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 275  Q
    ||||||||||| |||  |||||||||||||| ||||||||  ||||||||| ||||| |||||  |||||| ||| |||| | ||||||||    
T  27093454 agaaaatcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaatccgatgagtgtcc 27093364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 275
Target Start/End: Original strand, 27184847 - 27184937
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 275  Q
    ||||||||||| |||  |||||||||||||| ||||||||  ||||||||| ||||| |||||  |||||| ||| |||| | ||||||||    
T  27184847 agaaaatcacataatttagtgtaattatatgcgtcggtgttagacacgacatgtgtccgacactaggacacacctaatccgatgagtgtcc 27184937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 29763187 - 29763129
Alignment:
Q  228 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||| ||||   |||||||||| |||| |||||||||||||||||||||    
T  29763187 acacgacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 19213817 - 19213870
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgac 234  Q
    ||||| ||||||||| |||||||||||| || | ||||||||||||||||||||    
T  19213817 ttttaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcggacacgac 19213870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 22602751 - 22602710
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  22602751 agaaaatcacataattcagtgtaattatatgtgtcggtgtcg 22602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 24105712 - 24105797
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||| | ||||||| ||||| ||| ||| ||||| ||||| ||||||||||| | || ||||||||  |||||||||||    
T  24105712 cagtgtaattacaagtgtcggagtcgggcacaacatgtgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 640134 - 640182
Alignment:
Q  188 aaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacac 236  Q
    |||||||| ||| ||||||||||||||||||||||||| || |||||||    
T  640134 aaatcacataattcagtgtaattatatgtgtcggtgtcagatacgacac 640182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 289
Target Start/End: Original strand, 6490786 - 6490838
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagttt 289  Q
    ||||| ||||| ||||||||| | |||| ||||||||||||||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatagttt 6490838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 8842322 - 8842282
Alignment:
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  8842322 gacaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 221 - 281
Target Start/End: Original strand, 13770750 - 13770810
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgctt 281  Q
    ||||||||||| ||||||||| ||||| || |||||||| |||| | ||||||||||||||    
T  13770750 gtgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 17852056 - 17852120
Alignment:
Q  223 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    |||||||| |||||||||| ||||| | ||||| ||| || | ||||||||||||||||||||||    
T  17852056 gtcggacatgacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatagt 17852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 25791617 - 25791711
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||| ||||||||||| |||| | ||||||| ||||| ||||| | ||| ||||| ||||| ||| || |||| ||||||||||||||||||    
T  25791617 atgaagcacggatacggacacagaca-ctgacacgccgacaccgctaattatttgagaaattcacataat-caatgtagttatatgtgtcggtgtcg 25791711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 3721111 - 3721158
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacg 232  Q
    ||||||||||| |||  ||| |||||||||||||||||||||||||||    
T  3721111 agaaaatcacataatttagtataattatatgtgtcggtgtcggacacg 3721158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 285
Target Start/End: Original strand, 4794951 - 4795018
Alignment:
Q  218 tcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||||||| ||||||||    ||||| || ||||||| |||||| ||||||||||    
T  4794951 tcggtgtcggacacgacacgtatctgacacctaaacacgtctaatccaagaagtgtctgtgcttcata 4795018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 266
Target Start/End: Original strand, 8234166 - 8234245
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaa 266  Q
    ||||| ||| ||| ||||||| ||| | ||| |||||||||||||||||| |||| ||||| | ||||||||| ||||||    
T  8234166 aaaataacataattcagtgtagttacaagtgccggtgtcggacacgacacatgtccgacaccgagacacgcctaatccaa 8234245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 11831494 - 11831565
Alignment:
Q  218 tcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagttt 289  Q
    |||||||||||||||||| |||| |||||| ||  ||||||| ||||||| | ||| | |||||||||||||    
T  11831494 tcggtgtcggacacgacatgtgtttgacaccggagcacgcctaatccaagaactgttcatgcttcatagttt 11831565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 17851445 - 17851488
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgt 224  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||    
T  17851445 ttttagaaaatcacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 35862027 - 35862070
Alignment:
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||| |||||||||| |||| |||||||||||||||||||||    
T  35862027 gacacgaggacacgcctaatccgaggagtgtccgtgcttcatag 35862070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 40287356 - 40287297
Alignment:
Q  232 gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagtttag 291  Q
    ||||| |||| ||||| |||||| |||| |||| ||||||||||||||||| ||||||||    
T  40287356 gacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcgtagtttag 40287297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 2334314 - 2334380
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 287  Q
    |||||||||||||||| |||| ||||| |  ||||| || |||| ||||||||||||| ||||||||    
T  2334314 gtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcatagt 2334380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 1656676 - 1656721
Alignment:
Q  167 gacacagctaaattttttagaaaatcacaaaatgcagtgtaattat 212  Q
    |||||| |||||||||||| ||||||||| ||| ||||||||||||    
T  1656676 gacacaactaaattttttaaaaaatcacataattcagtgtaattat 1656721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 285
Target Start/End: Complemental strand, 3554528 - 3554447
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||  ||||||||||||||||||||| | ||| |||| | |||||| || || | | ||||||| ||||||||||    
T  3554528 tgtaattatagatgtcggtgtcggacacgacacatatctaacactgagacacgtctaattcgaagagtgtctgtgcttcata 3554447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 11738236 - 11738151
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||| |||||| ||||||| | || ||||||   |||| | ||||||||| |||  ||||||||||||| |||||||    
T  11738236 cagtgtaattatacgtgtcgctgtcggaaatgagacgtgttccacactgagacacgcctaatcagaggagtgtccgtgtttcatag 11738151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 24146830 - 24146879
Alignment:
Q  181 ttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggaca 230  Q
    ||||||||||||||| ||| || | |||||||||||||||||||| ||||    
T  24146830 ttttagaaaatcacataattcaatataattatatgtgtcggtgtctgaca 24146879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 26033461 - 26033392
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| |||| |||||||||| || || | ||||| ||| |||| ||||||||||||| |||||    
T  26033461 gtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 28155624 - 28155673
Alignment:
Q  237 gtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| |||||  |||||||||| ||||||||| ||||||||||||||||    
T  28155624 gtgtcggacaccaggacacgcctaatccaaggaatgtccgtgcttcatag 28155673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 277
Target Start/End: Original strand, 41918906 - 41918975
Alignment:
Q  208 attatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgt 277  Q
    ||||||| ||||| ||||| ||||| || |||||||||||||  || ||| |||||| ||||||||||||    
T  41918906 attatatatgtcgttgtcgaacacggcaagtgtctgacacggaaacccgcattatccgaggagtgtccgt 41918975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 5307339 - 5307375
Alignment:
Q  250 ggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  5307339 ggacacgcctaatccaaggagtgtacgtgcttcatag 5307375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 247
Target Start/End: Original strand, 9933332 - 9933364
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacac 247  Q
    |||||||||||||||||||||| ||||||||||    
T  9933332 gtgtcggtgtcggacacgacacatgtctgacac 9933364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 201 - 285
Target Start/End: Original strand, 10359633 - 10359717
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||| |||||| ||||||| |||||  ||||| ||||| | |||||| || |||| |   ||||||||||||||||    
T  10359633 cagtgtaattataggtgtcgatgtcggatacgacttgtgtccgacaccgagacacgtctaatccgaaaggtgtccgtgcttcata 10359717  T

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Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 234 - 286
Target Start/End: Original strand, 14729770 - 14729822
Alignment:
Q  234 cacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||| ||||| ||||||||| | |||| |||||||||||| ||||||||    
T  14729770 cacgtgtccgacaccgggacacgcttaatccgaggagtgtccgtacttcatag 14729822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 20545249 - 20545185
Alignment:
Q  221 gtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    |||||| ||||||||| |||| ||||||||||||||  | || | ||||||||| ||||||||||    
T  20545249 gtgtcgtacacgacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcata 20545185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 32308084 - 32308179
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||||||||  ||||| ||| |||||| | |||||| ||||| |||||   ||| ||||||||||| ||| |||||||||| |||||||| ||||||    
T  32308084 atgaagcacaaatacgaacatggacactg-acacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcg 32308179  T

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Target: scaffold0623 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 6063 - 5926
Alignment:
Q  159 gacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgga-----------cacgacacgtgtctgacac 247  Q
    ||||||| || ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |           |||||||||||||||||||    
T  6063 gacacgccgatacatctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtatcggtgtcgaacacgacacgtgtctgacac 5964  T
Q  248 ggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
     | ||||||||||||||||||||||||||||| |||||    
T  5963 agagacacgccttatccaaggagtgtccgtgcctcata 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 501 - 403
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||| |||||| ||||| ||||||| ||| |||| ||||||||||||||||||||    
T  501 aaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 143 - 286
Target Start/End: Original strand, 14506 - 14646
Alignment:
Q  143 acggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtct 242  Q
    ||||| ||||||||||||||||| |||||| ||||   ||| | ||||||||| ||| ||||||||||| | |||   |||||||||||||||||||||     
T  14506 acggatacggacaccggacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg---gtgtcggacacgacacgtgtcc 14602  T
Q  243 gacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| | ||||||||| ||| ||||||||| ||||||||||||    
T  14603 gacaccgagacacgcctaatcgaaggagtgtacgtgcttcatag 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 9878 - 9957
Alignment:
Q  146 gacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    |||| |||||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9878 gacatggacaccg-acacgccgacacagctaatttttttagaaaatcataaaatgcagtgtaattatatgtgtcggtgtcg 9957  T

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Target: scaffold0306 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 13454 - 13523
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||||||||||||||| |||||||||  |||||| ||| ||||||||||||||||||||||||    
T  13454 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 21873 - 21804
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||||||||||||||| |||||||||  |||||| ||| ||||||||||||||||||||||||    
T  21873 gtgtcggtgtcggacacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

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Target: scaffold0083 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 45555 - 45470
Alignment:
Q  201 cagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||| | |||| |||| |||||| || ||| ||||||||||||    
T  45555 cagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgcgacatgcctaatccaaagattgtacgtgcttcatag 45470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 8833 - 8917
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||| | ||||||||| |||  |||||| ||||||||||||||    
T  8833 agtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatag 8917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 70298 - 70394
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttca 283  Q
    ||||| ||| ||| ||||||||||||| ||||||||||||||||||||||||||| |||||  ||||| |||| |||| | |||||| |||||||||    
T  70298 aaaataacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 241653 - 241724
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||| |||||||||||||||||||||| ||||| ||||||||||| |||| || ||||||||||||||||||    
T  241653 gtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

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Target: scaffold0793 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 4922 - 4821
Alignment:
Q  187 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtc--ggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| ||| ||||||||||| | |||| ||||||  | ||||||||| |||| ||||| ||||||||||| |||| |||||||||||||||||||    
T  4922 aaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 4823  T
Q  285 ag 286  Q
    ||    
T  4822 ag 4821  T

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Target: scaffold0475 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 3343 - 3427
Alignment:
Q  202 agtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||| | ||||| |||||||||| ||||||||   ||||| ||||||||||| |||| |||||||||||||||||||||    
T  3343 agtgtaattacaagtgtcagtgtcggacaagacacgtggtggacactgggacacgcctaatccgaggagtgtccgtgcttcatag 3427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 8649 - 8720
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||| |||| | |||||||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||    
T  8649 gtgtctgtgttgaacacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 8720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 71784 - 71855
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||| ||||||||| ||||| |||||||| || |||| ||||||||| |||||||||||    
T  71784 gtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcatag 71855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 204 - 286
Target Start/End: Complemental strand, 5058 - 4976
Alignment:
Q  204 tgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||| | ||||||||||||||||||||||||||| ||||  | |||| |||| |||| ||||||||| |||||||||||    
T  5058 tgtaattacaagtgtcggtgtcggacacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 92875 - 92940
Alignment:
Q  220 ggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 285  Q
    ||||||||||||||||| |||| |||||  |||||||||| |||| ||||||||||||||||||||    
T  92875 ggtgtcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 8635 - 8564
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||| |||||||||| ||||||| ||||| || |||||||| || | |||||||||||||||||||||    
T  8635 gtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 287
Target Start/End: Original strand, 90861 - 90963
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||| | ||| |||||||||||||| ||||| |||| ||||| ||||||||| |||||    |||||||| |||||| ||||||  |||||||||    
T  90861 agaaaatcatataattcagtgtaattatatatgtcgatgtcagacacaacacgtgtccgacaccaaaacacgcctaatccaatgagtgtatgtgcttcat 90960  T
Q  285 agt 287  Q
    |||    
T  90961 agt 90963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 44593 - 44529
Alignment:
Q  158 ggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggt 222  Q
    ||||| |||||||| ||||||  ||| ||||||||||| ||| ||||||||||||||||||||||    
T  44593 ggacaagctgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 53239 - 53303
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgc 279  Q
    |||||||||||||||| |||||||||| ||||| ||||||||  | ||||||| |||||||||||    
T  53239 gtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgc 53303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 3849 - 3778
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||| ||||||||||||||||| |||| ||||  | ||||||||| |||| |||||||||| ||||||||||    
T  3849 gtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcatag 3778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 2987 - 3058
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||| || ||||||||||||||  ||||| || |||||||| |||| ||||||||||||||| |||||    
T  2987 gtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgctccatag 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 15045 - 15090
Alignment:
Q  241 ctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||    
T  15045 ctgacacggggacacgccttatccgaggagtgtttgtgcttcatag 15090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 9747 - 9678
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    |||| |||||| |||||||||| |||||||||  ||||||||  | |||| |||||||||||||||||||    
T  9747 gtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgcttcat 9678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 9788 - 9747
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||  ||| ||||||||||||||||||||||||||    
T  9788 agaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 9747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 17737 - 17844
Alignment:
Q  130 atgaagcactgatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcggac 229  Q
    ||||||||| |||||||||||| |||| ||||||   |||||| |||  ||||| ||||||||||| ||  | |||||||| |||||||||||||| |||    
T  17737 atgaagcacagatacggacacg-acac-ggacacc--gacacaactagttttttaagaaaatcacacaactcggtgtaattgtatgtgtcggtgtcagac 17832  T
Q  230 acgacacgtgtc 241  Q
    |||||| |||||    
T  17833 acgacatgtgtc 17844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 13472 - 13543
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    |||||||||||||||||||||||| |  ||||  |||| || ||| |||| |||||||||||| ||||||||    
T  13472 gtgtcggtgtcggacacgacacgtatacgacatcgggatacacctaatccgaggagtgtccgtacttcatag 13543  T

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Target: scaffold0697 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 1683 - 1733
Alignment:
Q  206 taattatatgtgtcggtgtcggacacgacacgtgtctgacacggggacacg 256  Q
    |||||||| |||||||||||||||||||||| |||| |||||  |||||||    
T  1683 taattataagtgtcggtgtcggacacgacacatgtccgacactaggacacg 1733  T

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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 51785 - 51888
Alignment:
Q  140 gatacggacacggacaccggacacgctgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatg---tgtcggtgtcggacacgacac 236  Q
    ||||||||||||||||| | |||||| |||||||||||   ||| | ||||||||| ||| ||||||||||| | |   |||||||||| ||||||| ||    
T  51785 gatacggacacggacactg-acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttgtcggtgtcagacacgatac 51883  T
Q  237 gtgtc 241  Q
    |||||    
T  51884 gtgtc 51888  T

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Target: scaffold0057 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 24083 - 24155
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtct--gacacggggacacgccttatccaaggagtgtccgtgcttcatag 286  Q
    ||||||||||||||||| |||||||| |  ||||| || |||||||| |||| | |||||||||||||||||||    
T  24083 gtgtcggtgtcggacacaacacgtgtgtccgacactgg-acacgcctaatccgatgagtgtccgtgcttcatag 24155  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 46741 - 46779
Alignment:
Q  251 gacacgccttatccaaggagtgtccgtgcttcatagttt 289  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  46741 gacacgcctaatccgaggagtgtccgtgcttcatagttt 46779  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 135353 - 135312
Alignment:
Q  185 agaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcg 226  Q
    ||||||||||| ||| | ||||||||||||||||||||||||    
T  135353 agaaaatcacataattctgtgtaattatatgtgtcggtgtcg 135312  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 263372 - 263303
Alignment:
Q  215 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 284  Q
    ||||||||||| ||||||||||||||  || ||   ||||||||| |||| ||||||||||||| |||||    
T  263372 gtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

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