View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3818_low_9 (Length: 252)

Name: NF3818_low_9
Description: NF3818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3818_low_9
NF3818_low_9
[»] chr2 (27 HSPs)
chr2 (9-252)||(23019526-23019769)
chr2 (9-249)||(22798949-22799189)
chr2 (60-252)||(22740780-22740973)
chr2 (63-252)||(22758535-22758725)
chr2 (9-247)||(25963542-25963778)
chr2 (108-252)||(23038190-23038334)
chr2 (116-252)||(40622028-40622164)
chr2 (28-215)||(23103253-23103441)
chr2 (130-252)||(24673753-24673875)
chr2 (20-252)||(22811732-22811963)
chr2 (130-252)||(21918136-21918258)
chr2 (12-166)||(22738085-22738240)
chr2 (9-105)||(25616243-25616339)
chr2 (17-100)||(21916071-21916153)
chr2 (11-166)||(22731139-22731295)
chr2 (23-166)||(23076514-23076658)
chr2 (53-252)||(37524772-37524963)
chr2 (17-100)||(21318608-21318691)
chr2 (23-135)||(23060585-23060697)
chr2 (28-206)||(23660099-23660278)
chr2 (149-252)||(45677975-45678078)
chr2 (17-100)||(24716502-24716583)
chr2 (9-171)||(23654286-23654449)
chr2 (53-100)||(31344962-31345009)
chr2 (42-206)||(23285952-23286117)
chr2 (130-192)||(40428638-40428700)
chr2 (124-165)||(32451835-32451876)
[»] scaffold0023 (2 HSPs)
scaffold0023 (9-233)||(38318-38542)
scaffold0023 (27-252)||(23487-23711)
[»] chr4 (27 HSPs)
chr4 (9-252)||(15093829-15094072)
chr4 (116-252)||(13569675-13569811)
chr4 (116-252)||(44675795-44675931)
chr4 (124-252)||(23843649-23843777)
chr4 (9-252)||(16356773-16357014)
chr4 (124-252)||(15124974-15125101)
chr4 (9-252)||(16348485-16348726)
chr4 (17-252)||(16487898-16488132)
chr4 (130-252)||(12570198-12570320)
chr4 (16-100)||(5338953-5339037)
chr4 (23-166)||(22636507-22636650)
chr4 (37-100)||(13812991-13813053)
chr4 (132-251)||(15121624-15121743)
chr4 (28-166)||(16239875-16240014)
chr4 (28-162)||(16270145-16270280)
chr4 (42-239)||(14038739-14038937)
chr4 (23-166)||(44052901-44053045)
chr4 (17-100)||(20157432-20157514)
chr4 (27-154)||(43256080-43256205)
chr4 (23-135)||(7798846-7798958)
chr4 (23-171)||(12902829-12902978)
chr4 (23-122)||(7893775-7893874)
chr4 (53-100)||(43256386-43256433)
chr4 (43-100)||(4561306-4561363)
chr4 (124-165)||(6190636-6190677)
chr4 (45-129)||(23374302-23374386)
chr4 (42-122)||(6899981-6900061)
[»] scaffold0096 (1 HSPs)
scaffold0096 (9-251)||(16170-16411)
[»] chr8 (33 HSPs)
chr8 (9-252)||(23776654-23776898)
chr8 (116-252)||(19899258-19899394)
chr8 (116-252)||(17353757-17353893)
chr8 (12-200)||(20465911-20466098)
chr8 (116-252)||(19983256-19983392)
chr8 (116-252)||(21168541-21168677)
chr8 (17-247)||(30643116-30643346)
chr8 (116-252)||(21161878-21162014)
chr8 (9-233)||(17926546-17926768)
chr8 (124-252)||(16184899-16185027)
chr8 (9-252)||(16410075-16410316)
chr8 (144-252)||(21395802-21395910)
chr8 (144-252)||(21790295-21790403)
chr8 (130-252)||(24755898-24756020)
chr8 (17-247)||(15602842-15603071)
chr8 (17-247)||(15611294-15611523)
chr8 (144-252)||(21389272-21389380)
chr8 (130-212)||(377455-377537)
chr8 (162-252)||(19976654-19976744)
chr8 (9-105)||(18678069-18678165)
chr8 (11-166)||(23648613-23648769)
chr8 (9-105)||(32121790-32121886)
chr8 (23-166)||(18818314-18818458)
chr8 (6-166)||(20536263-20536424)
chr8 (130-211)||(19259443-19259524)
chr8 (23-166)||(21923833-21923977)
chr8 (53-98)||(16861300-16861345)
chr8 (23-166)||(21918905-21919049)
chr8 (42-166)||(18879142-18879266)
chr8 (28-166)||(28648949-28649088)
chr8 (53-83)||(21383738-21383768)
chr8 (102-239)||(6759406-6759545)
chr8 (23-135)||(16092279-16092391)
[»] chr5 (35 HSPs)
chr5 (9-252)||(21873308-21873548)
chr5 (26-252)||(37723976-37724203)
chr5 (116-252)||(14079311-14079447)
chr5 (116-252)||(23501165-23501301)
chr5 (118-252)||(23201533-23201668)
chr5 (116-252)||(23512270-23512406)
chr5 (120-252)||(26704233-26704365)
chr5 (120-252)||(26973966-26974098)
chr5 (17-252)||(21366486-21366719)
chr5 (116-252)||(22032479-22032615)
chr5 (116-212)||(18769864-18769960)
chr5 (9-105)||(17517168-17517264)
chr5 (28-166)||(24493645-24493784)
chr5 (28-239)||(9078029-9078241)
chr5 (9-252)||(20805606-20805846)
chr5 (23-166)||(25421604-25421748)
chr5 (23-166)||(25431466-25431610)
chr5 (17-100)||(24767518-24767600)
chr5 (23-166)||(23390401-23390545)
chr5 (28-206)||(8286707-8286886)
chr5 (28-154)||(20910719-20910843)
chr5 (59-166)||(24529328-24529436)
chr5 (17-100)||(1858950-1859031)
chr5 (28-154)||(18356390-18356514)
chr5 (9-100)||(20767028-20767117)
chr5 (17-100)||(23451410-23451491)
chr5 (33-171)||(22075101-22075240)
chr5 (132-212)||(23572258-23572338)
chr5 (6-100)||(23458643-23458735)
chr5 (6-100)||(23462904-23462996)
chr5 (53-100)||(18356042-18356089)
chr5 (53-100)||(20911144-20911191)
chr5 (30-114)||(21808347-21808431)
chr5 (59-166)||(13025418-13025526)
chr5 (59-166)||(13095602-13095710)
[»] scaffold1895 (1 HSPs)
scaffold1895 (41-252)||(1047-1258)
[»] chr1 (25 HSPs)
chr1 (9-252)||(21787862-21788105)
chr1 (11-252)||(22468516-22468757)
chr1 (17-252)||(18181941-18182175)
chr1 (63-252)||(21714659-21714849)
chr1 (63-252)||(42865031-42865221)
chr1 (116-252)||(20091293-20091429)
chr1 (17-201)||(22449137-22449320)
chr1 (91-252)||(48603654-48603816)
chr1 (130-252)||(6152032-6152154)
chr1 (131-252)||(22831198-22831319)
chr1 (16-176)||(8761529-8761689)
chr1 (9-166)||(20135245-20135403)
chr1 (130-214)||(21022815-21022899)
chr1 (23-135)||(22532341-22532453)
chr1 (23-166)||(34509852-34509996)
chr1 (37-239)||(3472759-3472959)
chr1 (17-100)||(17678559-17678640)
chr1 (23-171)||(27250629-27250778)
chr1 (45-171)||(21026774-21026901)
chr1 (28-166)||(22354477-22354616)
chr1 (28-154)||(33797596-33797720)
chr1 (53-100)||(20229118-20229165)
chr1 (53-87)||(33797367-33797401)
chr1 (130-191)||(18393845-18393906)
chr1 (103-206)||(50210078-50210182)
[»] scaffold0093 (1 HSPs)
scaffold0093 (9-187)||(4690-4867)
[»] scaffold0035 (1 HSPs)
scaffold0035 (9-252)||(46547-46789)
[»] scaffold0043 (1 HSPs)
scaffold0043 (116-252)||(18403-18539)
[»] chr3 (44 HSPs)
chr3 (116-252)||(17524972-17525108)
chr3 (108-249)||(23408587-23408728)
chr3 (116-239)||(14878338-14878462)
chr3 (37-251)||(11862875-11863088)
chr3 (17-252)||(12496319-12496553)
chr3 (17-245)||(19725739-19725965)
chr3 (37-247)||(322673-322882)
chr3 (9-233)||(11298368-11298590)
chr3 (17-252)||(18383737-18383970)
chr3 (116-239)||(23077311-23077434)
chr3 (173-252)||(15877648-15877727)
chr3 (130-252)||(15060468-15060590)
chr3 (18-249)||(11851644-11851868)
chr3 (91-208)||(14179572-14179690)
chr3 (25-166)||(14576738-14576880)
chr3 (116-252)||(856298-856434)
chr3 (23-166)||(43841004-43841148)
chr3 (9-105)||(46822323-46822419)
chr3 (17-100)||(14668619-14668701)
chr3 (23-166)||(13442346-13442490)
chr3 (9-105)||(12511115-12511211)
chr3 (23-166)||(23083266-23083410)
chr3 (23-166)||(26686959-26687103)
chr3 (17-100)||(12037925-12038007)
chr3 (17-100)||(14665463-14665545)
chr3 (130-212)||(16909926-16910008)
chr3 (28-165)||(24153115-24153253)
chr3 (23-166)||(17487928-17488072)
chr3 (23-166)||(18438606-18438750)
chr3 (130-252)||(16369584-16369706)
chr3 (130-247)||(23052902-23053019)
chr3 (108-172)||(15877947-15878011)
chr3 (23-135)||(17499410-17499522)
chr3 (23-166)||(25476290-25476434)
chr3 (53-100)||(4589082-4589129)
chr3 (53-100)||(5223149-5223196)
chr3 (53-100)||(11300739-11300786)
chr3 (53-100)||(12339551-12339598)
chr3 (53-100)||(15464950-15464997)
chr3 (53-87)||(8489458-8489492)
chr3 (53-87)||(11854502-11854536)
chr3 (9-127)||(30029898-30030015)
chr3 (23-205)||(42386482-42386666)
chr3 (30-129)||(12399288-12399387)
[»] scaffold0174 (1 HSPs)
scaffold0174 (106-252)||(18273-18419)
[»] scaffold0004 (1 HSPs)
scaffold0004 (63-252)||(69905-70095)
[»] chr6 (32 HSPs)
chr6 (60-252)||(25642003-25642196)
chr6 (63-252)||(19863089-19863279)
chr6 (63-252)||(19873231-19873421)
chr6 (17-250)||(18907173-18907405)
chr6 (108-252)||(22438957-22439101)
chr6 (109-252)||(22432408-22432551)
chr6 (138-252)||(22334711-22334825)
chr6 (130-225)||(15894276-15894371)
chr6 (11-252)||(21834710-21834948)
chr6 (11-100)||(21766751-21766839)
chr6 (9-104)||(15041518-15041613)
chr6 (130-233)||(21739861-21739964)
chr6 (17-100)||(18180556-18180637)
chr6 (16-100)||(22074184-22074268)
chr6 (144-252)||(16523223-16523331)
chr6 (28-166)||(19303446-19303585)
chr6 (91-165)||(29060680-29060755)
chr6 (9-105)||(23992485-23992578)
chr6 (23-166)||(20360865-20361009)
chr6 (17-100)||(20907954-20908036)
chr6 (28-164)||(20593850-20593987)
chr6 (23-166)||(20638188-20638332)
chr6 (23-166)||(22780132-22780276)
chr6 (28-154)||(27415861-27415985)
chr6 (37-100)||(16523357-16523419)
chr6 (17-100)||(22408276-22408358)
chr6 (53-100)||(23414730-23414777)
chr6 (28-166)||(25629260-25629399)
chr6 (53-100)||(27556488-27556535)
chr6 (53-100)||(31478119-31478166)
chr6 (29-111)||(17287757-17287839)
chr6 (20-100)||(27325581-27325662)
[»] chr7 (27 HSPs)
chr7 (116-252)||(9703430-9703566)
chr7 (17-252)||(12321562-12321796)
chr7 (63-252)||(18154656-18154846)
chr7 (110-252)||(24054626-24054768)
chr7 (17-252)||(14429945-14430178)
chr7 (63-250)||(19649306-19649494)
chr7 (162-252)||(11880462-11880552)
chr7 (116-252)||(17137883-17138019)
chr7 (116-252)||(12187177-12187313)
chr7 (17-100)||(2760193-2760276)
chr7 (29-166)||(12698910-12699048)
chr7 (28-165)||(18456319-18456457)
chr7 (23-166)||(9509261-9509405)
chr7 (17-191)||(3271885-3272058)
chr7 (37-100)||(2832414-2832476)
chr7 (30-171)||(26212075-26212217)
chr7 (37-100)||(39267872-39267934)
chr7 (39-100)||(9751728-9751788)
chr7 (9-120)||(14932685-14932797)
chr7 (9-120)||(15356120-15356232)
chr7 (9-120)||(15360234-15360346)
chr7 (53-100)||(7519331-7519378)
chr7 (53-100)||(13918753-13918800)
chr7 (53-100)||(25927476-25927523)
chr7 (43-100)||(12318204-12318261)
chr7 (28-136)||(38227557-38227665)
chr7 (28-72)||(40443467-40443511)
[»] scaffold0297 (1 HSPs)
scaffold0297 (116-249)||(15492-15625)
[»] scaffold0101 (1 HSPs)
scaffold0101 (116-252)||(8777-8913)
[»] scaffold0080 (2 HSPs)
scaffold0080 (9-201)||(18527-18718)
scaffold0080 (28-166)||(39989-40128)
[»] scaffold0021 (2 HSPs)
scaffold0021 (26-250)||(174839-175064)
scaffold0021 (91-166)||(124725-124801)
[»] scaffold0261 (1 HSPs)
scaffold0261 (108-252)||(1495-1639)
[»] scaffold0031 (2 HSPs)
scaffold0031 (108-252)||(65613-65757)
scaffold0031 (28-114)||(128827-128913)
[»] scaffold0425 (1 HSPs)
scaffold0425 (17-252)||(221-456)
[»] scaffold0149 (2 HSPs)
scaffold0149 (124-252)||(3913-4040)
scaffold0149 (124-252)||(8344-8471)
[»] scaffold0111 (1 HSPs)
scaffold0111 (63-252)||(32544-32733)
[»] scaffold0671 (1 HSPs)
scaffold0671 (116-248)||(6266-6398)
[»] scaffold0555 (1 HSPs)
scaffold0555 (116-252)||(745-881)
[»] scaffold0367 (1 HSPs)
scaffold0367 (9-252)||(951-1192)
[»] scaffold0139 (1 HSPs)
scaffold0139 (108-252)||(20138-20282)
[»] scaffold0081 (3 HSPs)
scaffold0081 (116-252)||(14835-14971)
scaffold0081 (116-252)||(23850-23986)
scaffold0081 (116-252)||(39274-39410)
[»] scaffold0037 (2 HSPs)
scaffold0037 (17-252)||(21389-21623)
scaffold0037 (53-87)||(80676-80710)
[»] scaffold0220 (1 HSPs)
scaffold0220 (116-250)||(4755-4889)
[»] scaffold0131 (1 HSPs)
scaffold0131 (63-252)||(36567-36757)
[»] scaffold0102 (1 HSPs)
scaffold0102 (118-252)||(48280-48414)
[»] scaffold0412 (1 HSPs)
scaffold0412 (9-252)||(6236-6477)
[»] scaffold0215 (1 HSPs)
scaffold0215 (116-252)||(26986-27122)
[»] scaffold0761 (1 HSPs)
scaffold0761 (17-247)||(6134-6363)
[»] scaffold0104 (2 HSPs)
scaffold0104 (9-238)||(1884-2111)
scaffold0104 (17-238)||(9575-9793)
[»] scaffold1296 (1 HSPs)
scaffold1296 (17-252)||(455-689)
[»] scaffold0079 (1 HSPs)
scaffold0079 (9-252)||(44135-44376)
[»] scaffold0198 (1 HSPs)
scaffold0198 (63-201)||(23954-24092)
[»] scaffold0393 (1 HSPs)
scaffold0393 (37-252)||(1575-1789)
[»] scaffold0346 (1 HSPs)
scaffold0346 (17-191)||(15149-15321)
[»] scaffold0311 (1 HSPs)
scaffold0311 (74-252)||(6898-7076)
[»] scaffold0158 (2 HSPs)
scaffold0158 (130-252)||(3016-3138)
scaffold0158 (130-252)||(6682-6804)
[»] scaffold0042 (2 HSPs)
scaffold0042 (130-252)||(34730-34852)
scaffold0042 (29-166)||(24206-24345)
[»] scaffold0280 (1 HSPs)
scaffold0280 (20-191)||(19173-19344)
[»] scaffold0676 (1 HSPs)
scaffold0676 (17-191)||(4492-4665)
[»] scaffold0615 (1 HSPs)
scaffold0615 (17-252)||(1904-2139)
[»] scaffold0185 (1 HSPs)
scaffold0185 (16-100)||(33608-33692)
[»] scaffold0476 (2 HSPs)
scaffold0476 (17-100)||(5648-5730)
scaffold0476 (17-100)||(6843-6925)
[»] scaffold0327 (3 HSPs)
scaffold0327 (17-100)||(351-434)
scaffold0327 (23-166)||(3434-3579)
scaffold0327 (130-191)||(453-514)
[»] scaffold1326 (1 HSPs)
scaffold1326 (17-189)||(1373-1544)
[»] scaffold0145 (2 HSPs)
scaffold0145 (28-166)||(38837-38976)
scaffold0145 (28-162)||(33018-33153)
[»] scaffold0121 (1 HSPs)
scaffold0121 (28-166)||(8438-8577)
[»] scaffold0324 (1 HSPs)
scaffold0324 (194-252)||(15642-15700)
[»] scaffold0175 (1 HSPs)
scaffold0175 (23-192)||(13164-13334)
[»] scaffold0056 (1 HSPs)
scaffold0056 (130-252)||(13897-14019)
[»] scaffold1124 (1 HSPs)
scaffold1124 (132-212)||(2055-2135)
[»] scaffold0231 (1 HSPs)
scaffold0231 (23-166)||(22954-23098)
[»] scaffold0216 (1 HSPs)
scaffold0216 (17-100)||(17083-17166)
[»] scaffold0210 (2 HSPs)
scaffold0210 (132-252)||(21626-21746)
scaffold0210 (132-252)||(29518-29638)
[»] scaffold0141 (1 HSPs)
scaffold0141 (28-242)||(39553-39768)
[»] scaffold0124 (1 HSPs)
scaffold0124 (17-201)||(42689-42867)
[»] scaffold0049 (1 HSPs)
scaffold0049 (28-242)||(75044-75259)
[»] scaffold0011 (1 HSPs)
scaffold0011 (23-166)||(51985-52129)
[»] scaffold0166 (1 HSPs)
scaffold0166 (17-100)||(10015-10097)
[»] scaffold0647 (1 HSPs)
scaffold0647 (23-135)||(6058-6170)
[»] scaffold0292 (2 HSPs)
scaffold0292 (23-166)||(3542-3686)
scaffold0292 (31-135)||(422-526)
[»] scaffold0193 (1 HSPs)
scaffold0193 (23-166)||(13283-13427)
[»] scaffold0016 (2 HSPs)
scaffold0016 (23-166)||(1923-2067)
scaffold0016 (27-100)||(207811-207885)
[»] scaffold0114 (1 HSPs)
scaffold0114 (116-212)||(7453-7549)
[»] scaffold1052 (1 HSPs)
scaffold1052 (17-100)||(2967-3049)
[»] scaffold0022 (1 HSPs)
scaffold0022 (17-100)||(73740-73821)
[»] scaffold0228 (3 HSPs)
scaffold0228 (28-239)||(4584-4796)
scaffold0228 (28-239)||(12166-12378)
scaffold0228 (28-239)||(22118-22330)
[»] scaffold0107 (1 HSPs)
scaffold0107 (28-154)||(15336-15460)
[»] scaffold0456 (1 HSPs)
scaffold0456 (26-73)||(10424-10471)
[»] scaffold0403 (1 HSPs)
scaffold0403 (30-157)||(4928-5056)
[»] scaffold0029 (1 HSPs)
scaffold0029 (132-201)||(12937-13006)
[»] scaffold0008 (1 HSPs)
scaffold0008 (19-100)||(30716-30795)
[»] scaffold0003 (2 HSPs)
scaffold0003 (28-154)||(71376-71500)
scaffold0003 (53-100)||(71147-71194)
[»] scaffold0120 (2 HSPs)
scaffold0120 (28-239)||(32791-33001)
scaffold0120 (28-239)||(46004-46214)
[»] scaffold0070 (1 HSPs)
scaffold0070 (40-191)||(4613-4764)
[»] scaffold0051 (1 HSPs)
scaffold0051 (53-100)||(30969-31016)
[»] scaffold0309 (1 HSPs)
scaffold0309 (45-166)||(6704-6826)
[»] scaffold0034 (1 HSPs)
scaffold0034 (108-165)||(51790-51848)
[»] scaffold0001 (1 HSPs)
scaffold0001 (18-100)||(422504-422585)
[»] scaffold0490 (1 HSPs)
scaffold0490 (45-142)||(2046-2143)


Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 23019769 - 23019526
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23019769 agcataggcagatcacaacaacaacatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 23019670  T
Q  109 tatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaa 208  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| |||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  23019669 tatatcacatcatattcaacattaacatttcataaaagcttcacaaattgcaaataacttcttatataggtcacattactacccaagggtccaactctaa 23019570  T
Q  209 tcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    | ||||||||||||||| ||||||||||||||||||||||||||    
T  23019569 ttaaattatgcgacacagatcgcaatatcctgacttgcactcag 23019526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 9 - 249
Target Start/End: Complemental strand, 22799189 - 22798949
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 108  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  22799189 agcataggcagatcacaacaacatcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaaggcacataacat 22799090  T
Q  109 tatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaa 208  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||| ||||||| ||||||    
T  22799089 tatatcacatcatattcaacattaacatttcataacagcttcacaaattgcagttaacttcttatataggtcacattactacccaggggtccatctctaa 22798990  T
Q  209 tcaaattatgcgacacatatcgcaatatcctgacttgcact 249  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  22798989 tcaaattatgcgacacagatcgcaatatcctaacttgcact 22798949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 60 - 252
Target Start/End: Complemental strand, 22740973 - 22740780
Alignment:
Q  60 caacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaacatttcataacagcttcacagattg 158  Q
    ||||||||||||||||||||| | |||  | ||||||||||  ||| | ||||||| ||||||||||||||||||||| |||||||| ||||| ||||||    
T  22740973 caacaacatcttaatcattcattcataattcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacaacttcaaagattg 22740874  T
Q  159 taattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
     | ||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  22740873 cagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcag 22740780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 63 - 252
Target Start/End: Complemental strand, 22758725 - 22758535
Alignment:
Q  63 caacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaa 161  Q
    |||||||| ||||||||| | |||  | ||||||||||  ||| | ||||||| ||||||||||||||||||||| |||||||||||||| |||||| |     
T  22758725 caacatctcaatcattcattcataattcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacagcttcatagattgcag 22758626  T
Q  162 ttaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||| |||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  22758625 ttaatttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcag 22758535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 247
Target Start/End: Complemental strand, 25963778 - 25963542
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cg 107  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||  ||| |     
T  25963778 agcataggcagatcacaacaacagcataatttcataatatcaa-ttcatttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatca 25963680  T
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||| ||| ||| | |  |||| ||| || |||| ||||||||||||||||  ||||||| ||||| ||| |||||||||||||| ||||||||||| |||    
T  25963679 ttaaatcacattacaaacaac-ttagcagttca-aacagcttcacagatttcaattaacatcttaaataggtcacattactacctaagggtccaacccta 25963582  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgca 247  Q
    ||||| ||||| || ||| ||||||| || || |||||||    
T  25963581 atcaacttatgagaaacagatcgcaacatactaacttgca 25963542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 108 - 252
Target Start/End: Original strand, 23038190 - 23038334
Alignment:
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||||||| ||||||||| |||| |||||| |||||| |||||||||||||| |  |||||||||||||| ||| || ||||||||||||||||| |||||    
T  23038190 ttatatcacatcatatttaacactaacatctcataagagcttcacagattgcagataacttcttatataggtctcaatactacccaagggtccatctcta 23038289  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||| |||||||||| |||||||| |||| ||||||||||||    
T  23038290 atcaaatcatgcgacacagatcgcaatttcctcacttgcactcag 23038334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 40622164 - 40622028
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||| ||||||  ||||| ||||||||||||||||||||| | ||||||||||||||| ||| |||||||||||||||||||| |||||| |||| |    
T  40622164 catcataatcaacacaaacatctcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaaacaaaat 40622065  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||| ||| ||||||||||||| ||||||||||||    
T  40622064 atgcgaaacagatcgcaatatcctcacttgcactcag 40622028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 215
Target Start/End: Complemental strand, 23103441 - 23103253
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattca 126  Q
    ||||||||||| | || ||||||| |||| |||| |||||||| ||||||||| | |||  | |||| |||||  ||| | ||||||| ||||| || ||    
T  23103441 aacagcatgacatgattatatcaaattcaattcatcaacatctcaatcattcattcataattcaagtcatgcaattaaacattatatcacatcaaatcca 23103342  T
Q  127 acattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||| |||||| ||||||||||||||||||||| | ||||||||||||||| ||| |||||||||| ||||||||| |||||||||||||    
T  23103341 acactaacatctcataacagcttcacagattgcagttaacttcttatataggtctcattactaccaaagggtccatctctaatcaaatt 23103253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 24673753 - 24673875
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatc 229  Q
    |||||||||||||| |||||||||||| | ||||||| || |||||| |||||||||||||  ||| ||||||| |||||||| |||||||||||| |||    
T  24673753 ttaacatttcataatagcttcacagatcgcaattaacatcctatataggtcacattactacttaagagtccaaccctaatcaatttatgcgacacagatc 24673852  T
Q  230 gcaatatcctgacttgcactcag 252  Q
    |||| ||||| ||||||| ||||    
T  24673853 gcaacatcctaacttgcattcag 24673875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 252
Target Start/End: Complemental strand, 22811963 - 22811732
Alignment:
Q  20 atcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa--cgttatatctca 117  Q
    ||||||||||||  || ||||||| ||||||||| ||||||||||||||||| ||||||||||||||  | | ||||||||  | |  | ||| ||| ||    
T  22811963 atcacaacaacattataacttcatcatatcaatt-catttcaacaacatcttgatcattcaataatacttcaggtaatgcaatttaatcattaaatcaca 22811865  T
Q  118 tcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattat 217  Q
    | ||| ||||| |||| | |||||| ||||||||||||||  | ||||| ||||| ||| |||||||||||||| || |||||||| |||||||| ||||    
T  22811864 ttataatcaac-ttaatagttcatagcagcttcacagatttcacttaacatcttaaataggtcacattactacctaaaggtccaacactaatcaatttat 22811766  T
Q  218 gcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |  | ||| ||||||| ||||| ||||||||||||    
T  22811765 g-aaaacagatcgcaacatcctaacttgcactcag 22811732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 21918258 - 21918136
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatc 229  Q
    |||||| |||||| ||||||||||||||  | ||||| ||||| ||| |||||||||||||| |||||||||||  ||||||| |||||||| ||| |||    
T  21918258 ttaacagttcatagcagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaaccataatcaatttatgcgaaacagatc 21918159  T
Q  230 gcaatatcctgacttgcactcag 252  Q
    |||| ||||| ||||||| ||||    
T  21918158 gcaacatcctaacttgcattcag 21918136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 22738240 - 22738085
Alignment:
Q  12 ataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgtta 110  Q
    |||||||| | |||| ||||||||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| |||||||||||||||| |||    
T  22738240 ataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcacataacatta 22738142  T
Q  111 tatctcatcatattcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    |||| ||||||| ||||||| ||||  || | |||||||||||||||| ||||||||    
T  22738141 tatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 22738085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 25616243 - 25616339
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa 105  Q
    ||||||||||||| ||| |||||||| ||| | | |||||||||| || ||||||||||||||||  |||||||||||||| |||||||||||||||    
T  25616243 agcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatcttaaatattcaataatatctcaagtaatgcacataa 25616339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 21916153 - 21916071
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  21916153 cagatcacaacaaaagcataaattcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 21916071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 22731295 - 22731139
Alignment:
Q  11 cataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgtt 109  Q
    ||||||||| | |||| ||||||||||| | |||||||||||| || |||| |||||| ||||  ||||||  || |||| |||||||||||||||| ||    
T  22731295 cataggcagtttacaaaaacagcatgacataataatatcaattgcaattcatcaacatattaaatattcaaatat-tcttcaagtaatgcacataacatt 22731197  T
Q  110 atatctcatcatattcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    ||||| ||||||| ||||||| ||||  || | |||||||||||||||| ||||||||    
T  22731196 atatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 22731139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 23076514 - 23076658
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | |||||||||||| ||  ||||||| |||||||  ||||||| |||  | |||||||||||||||| ||||||| |||||||    
T  23076514 acaaaaacagcatgacataataatatcaattgcaagtcaacaatatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcata 23076613  T
Q  123 ttcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
     ||||||| ||||   | | |||||||||||||||| ||||||||    
T  23076614 atcaacatcaacacagcttaaacagcttcacagattataattaac 23076658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 252
Target Start/End: Original strand, 37524772 - 37524963
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaacattaacatttcataacagcttcac 152  Q
    |||||||||| |||||||| ||||||||||||||| | ||||||||||  |||      ||| ||| ||| ||| | | |||| |||||| |||||||||    
T  37524772 ttcatttcaataacatcttgatcattcaataatatttcaagtaatgcaattaa------atcacattataatcagcct-aacagttcatagcagcttcac 37524864  T
Q  153 agattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||| |  ||||||| ||||| ||| |||||||||||||| |||||||||||  ||||||| ||||| || ||| ||||||| || || ||||||| ||||    
T  37524865 agacttcaattaacatctta-ataggtcacattactacctaagggtccaaccttaatcaacttatgtgaaacagatcgcaacatactaacttgcattcag 37524963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 21318691 - 21318608
Alignment:
Q  17 cagatcacaacaacagcatgacttcataa-tatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||| |||||| ||||||||| |||||| |||||||| |||||||||| || |||||| ||||||| ||||||||||    
T  21318691 cagatcacaacagcagcataacttcataattatcaa-ttcatttctacaacatcttgattattcaacaatatctcaagtaatgca 21318608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 23060585 - 23060697
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| |||| |||||| | |||||||||||| ||  |||||||||||||||  ||| ||| |||  | |||||||||||||||| ||||||| |||||||    
T  23060585 acaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatattaaattatacttcaagtaatgcacataacattatatcacatcata 23060684  T
Q  123 ttcaacattaaca 135  Q
     ||||||| ||||    
T  23060685 atcaacatcaaca 23060697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 206
Target Start/End: Original strand, 23660099 - 23660278
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||| ||||| | |||||||||| | ||  |||||||||||||||  ||||||| ||| || |||||||||  ||||| ||||||| ||||||| ||||    
T  23660099 aacaggatgacataataatatcaaatgcaaatcaacaacatcttaaatattcaatcataactcaagtaatgcgtataacattatatcacatcataatcaa 23660198  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactct 206  Q
    ||| ||||  || | |||||||| ||| ||| |||||||| || |  ||||||| || |||||||| | ||| |||||||    
T  23660199 catcaacacatcttaaacagctttacaaattataattaacatcatcaataagtctcaatactaccccaaggttcaactct 23660278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 45678078 - 45677975
Alignment:
Q  149 tcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcac 248  Q
    |||||||||| ||||||| || |||||| |||||||||||||| ||| ||||| | |||||||| | |||||||||| ||| ||| || || | ||||||    
T  45678078 tcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaactcatgcgacacagatcacaacattctcaattgcac 45677979  T
Q  249 tcag 252  Q
    ||||    
T  45677978 tcag 45677975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 24716583 - 24716502
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||||  || ||||||||| | ||||| ||||||||||||||| ||||||||||||||||| |  |||||||||    
T  24716583 cagatcacaacaacattat-acttcataacaacaatt-catttcaacaacatcataatcattcaataatatgtctagtaatgca 24716502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 23654449 - 23654286
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 108  Q
    |||||||||||   ||||  ||| |||||| | |||||||||||| || |||| |||||||||||  ||||||  ||  || |||||||||| | ||| |    
T  23654449 agcataggcagcatacaaatacatcatgacataataatatcaattgcaattcatcaacatcttaaatattcaagtattactcaagtaatgcataaaacat 23654350  T
Q  109 tatatctcatcatattcaacattaacatttcat-aacagcttcacagattgtaattaacttctt 171  Q
    |||||| ||||||| | ||||  ||||  || | |||||||||||||||| |||||||| ||||    
T  23654349 tatatcacatcataattaacaacaacacatcttaaacagcttcacagattataattaacctctt 23654286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 31344962 - 31345009
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  31344962 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 31345009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 206
Target Start/End: Original strand, 23285952 - 23286117
Alignment:
Q  42 ataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcatattcaacattaacatttca 140  Q
    |||||||||||| || |||| |||||||||||  ||||||   | |||| |||||||||| | ||| ||||||| ||||||| ||||||  ||||  ||     
T  23285952 ataatatcaattgcaattcatcaacatcttaaatattcaaatgt-tcttcaagtaatgcataaaacattatatcacatcataatcaacaacaacacatct 23286050  T
Q  141 taa-cagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactct 206  Q
    ||| |||||||||||||| |||||||| ||||   ||||||  | |||||||||| ||| |||||||    
T  23286051 taaacagcttcacagattataattaacatcttcattaagtcttaatactacccaaaggttcaactct 23286117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 40428638 - 40428700
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactaccc 192  Q
    |||||| ||||||||||||||||||||   | ||||| ||||| ||| |||||||||||||||    
T  40428638 ttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattactaccc 40428700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 32451876 - 32451835
Alignment:
Q  124 tcaacattaacatttcataacagcttcacagattgtaattaa 165  Q
    |||||||||||||  ||||||||||||||| |||||||||||    
T  32451876 tcaacattaacatcccataacagcttcacaaattgtaattaa 32451835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 193; Significance: 1e-105; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 9 - 233
Target Start/End: Complemental strand, 38542 - 38318
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 108  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38542 agcatagacagatcacaacaacaacatgacttcttaatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 38443  T
Q  109 tatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaa 208  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  38442 tatatcacatcatattcaacattaacatttcataacagcttcacagattgcaactaacttcttatataggtcacattactacccaagggtccaactctaa 38343  T
Q  209 tcaaattatgcgacacatatcgcaa 233  Q
    ||||||||||||||||| |||||||    
T  38342 tcaaattatgcgacacagatcgcaa 38318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 27 - 252
Target Start/End: Complemental strand, 23711 - 23487
Alignment:
Q  27 caacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattca 126  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23711 caacaacatgacttcttaatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatcacatcatattca 23612  T
Q  127 acattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacat 226  Q
    |||||||||||||||||||||||||||||||| || ||||||||| |||| ||||||||||||||||||||||||||  |||||||||||||||||| |     
T  23611 acattaacatttcataacagcttcacagattgcaactaacttctt-tataggtcacattactacccaagggtccaacattaatcaaattatgcgacaaag 23513  T
Q  227 atcgcaatatcctgacttgcactcag 252  Q
    |||||||  | || ||||||||||||    
T  23512 atcgcaaagttctcacttgcactcag 23487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 15093829 - 15094072
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 108  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||| |    
T  15093829 agcatagaaagatcacaacaacagcatgacttcataatatcaatttcatttctacaacatattaatcattcaataatatattaagtaatgcacataacat 15093928  T
Q  109 tatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaa 208  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  15093929 tatatcacatcatattcaacattaacatttcataacagcttcagagattgcagttaacttcttatataggtcacattactaaccaagggtccatctctaa 15094028  T
Q  209 tcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  15094029 tcaaattatgcgacacagatcgcaatatcctaacttgcactcag 15094072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 13569675 - 13569811
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  13569675 catcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaatt 13569774  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||  ||||||||||||| ||||||||||||    
T  13569775 atgcgacacggatcgcaatatcctcacttgcactcag 13569811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 44675795 - 44675931
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||||||||| | ||||||| |||||||||||||    
T  44675795 catcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattactacctaggggtccatctctaatcaaatt 44675894  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| ||||||| ||||| ||||||||||||    
T  44675895 atgcgacacagatcgcaacatcctcacttgcactcag 44675931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 23843649 - 23843777
Alignment:
Q  124 tcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgaca 223  Q
    ||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||    
T  23843649 tcaacattaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattaccacccaagggtccatctctaatcaaattatgcgaca 23843748  T
Q  224 catatcgcaatatcctgacttgcactcag 252  Q
    || ||||||| ||||| ||||||||||||    
T  23843749 cagatcgcaacatcctcacttgcactcag 23843777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 16357014 - 16356773
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cg 107  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||| ||||||||||||||| | ||||||||||  ||| |     
T  16357014 agcataggcagatcacaacaacagcataatttcataatatcaa-ttcatttccacaacatcttgatcattcaataatatttcaagtaatgcatttaatca 16356916  T
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||| ||| ||| | |   ||| ||| || |||| ||||||||||||||||  | ||||| ||||| ||| |||||||||||||| ||||||||||| |||    
T  16356915 ttaaatcacattacaaaaaac-ttagcagttca-aacagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaacccta 16356818  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||| |||||||| ||| ||||||| || || ||||||| ||||    
T  16356817 atcaacttatgcgaaacagatcgcaacatactaacttgcattcag 16356773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 124 - 252
Target Start/End: Complemental strand, 15125101 - 15124974
Alignment:
Q  124 tcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgaca 223  Q
    ||||||||||||||||||||||||||||||||||| | ||||| | ||| | | ||||| |||||||||| |||||||||||||| ||||||||||||||    
T  15125101 tcaacattaacatttcataacagcttcacagattgcagttaacat-ttaaaaaggtcactttactacccaggggtccaactctaaacaaattatgcgaca 15125003  T
Q  224 catatcgcaatatcctgacttgcactcag 252  Q
    ||||||| |||||||| ||||||||||||    
T  15125002 catatcgaaatatcctcacttgcactcag 15124974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 16348726 - 16348485
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cg 107  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||| || |||||||||||| ||||||||||||  ||| |     
T  16348726 agcataggcagatcacaacaacagcataatttcataatatcaa-ttcatttccacaacatcttgataattcaataatattttaagtaatgcatttaatca 16348628  T
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||| ||| ||| | |  |||| ||| || || | || |||||||||||||  | ||||| ||||| ||| |||||||||||||| ||||||||||| |||    
T  16348627 ttaaatcacattacaaacaac-ttagcagttta-aaaagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaacccta 16348530  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||| |||||||| ||| ||||||| || || ||||||| ||||    
T  16348529 atcaacttatgcgaaacagatcgcaacatactaacttgcattcag 16348485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 16488132 - 16487898
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    |||||||||| | |||||| ||||||||||||||||| | ||||||||||||||| ||||||||||||||| | ||||||||||  ||| | ||| |||     
T  16488132 cagatcacaaaagcagcataacttcataatatcaatt-cttttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatca 16488034  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||| ||| ||| | |||||| ||||||  ||||||||||||   ||||||| ||||| ||| | |||||||||||| ||||||||| | | |||||| ||    
T  16488033 cattataatcagc-ttaacagttcatagtagcttcacagatctcaattaacatcttaaataggacacattactacctaagggtccatcccaaatcaactt 16487935  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||| ||| ||||||| ||||| ||||||| ||||    
T  16487934 atgcgaaacagatcgcaacatcctaacttgcattcag 16487898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 12570198 - 12570320
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatc 229  Q
    ||||||||||||||||||||||||||||| | ||||| || |||||| |||||||||||||||||||||||| |||||| ||| ||||||||||||  ||    
T  12570198 ttaacatttcataacagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtc 12570297  T
Q  230 gcaatatcctgacttgcactcag 252  Q
    ||||  | || ||||||||||||    
T  12570298 gcaaagttctcacttgcactcag 12570320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 5339037 - 5338953
Alignment:
Q  16 gcagatcacaacaacagcatgacttcataat-atcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||||||| ||||| || |||||||||||||| ||||||||||    
T  5339037 gcagatcacaacaacagcataacttcataattatcaatt-catttcaacaaaatcttgattattcaataatatctcaagtaatgca 5338953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 22636507 - 22636650
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat 121  Q
    |||| ||||||||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| |||||||||| ||||| ||||||| ||||||    
T  22636507 acaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcatataacattatatcacatcat 22636605  T
Q  122 attcaacattaacatttcataacagcttcacagattgtaattaac 166  Q
    | || |||| ||||  || ||||||||||||||||| ||||||||    
T  22636606 aatcgacatcaacacatcttaacagcttcacagattataattaac 22636650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 13813053 - 13812991
Alignment:
Q  37 acttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  13813053 acttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 13812991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 15121743 - 15121624
Alignment:
Q  132 aacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgc 231  Q
    ||||| ||||| |||| |||||||||| | ||||||||||||||| ||| |||||||||| || ||||||  ||||| ||| |||| ||||||| |||||    
T  15121743 aacatctcatatcagcctcacagattgcagttaacttcttatataggtctcattactacctaatggtccatgtctaaacaagttattcgacacagatcgc 15121644  T
Q  232 aatatcctgacttgcactca 251  Q
    ||  | || |||||||||||    
T  15121643 aaagttctcacttgcactca 15121624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 16240014 - 16239875
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  |||||||||||||||  ||||||| |||  |||||||||||| ||||| |||||||  |||||| ||||    
T  16240014 aacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatactttaagtaatgcaaataacattatatcatatcataatcaa 16239915  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    ||| ||||  || | ||||||||| |||||| ||||||||    
T  16239914 catcaacacatcttaaacagcttcgcagattataattaac 16239875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 162
Target Start/End: Complemental strand, 16270280 - 16270145
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  | |||||||||||||  ||||||| |||  | |||||||||||||||| ||||||| ||||||| ||||    
T  16270280 aacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcataatcaa 16270181  T
Q  128 cattaacatttcat-aacagcttcacagattgtaat 162  Q
    ||| ||||  || | |||||||||||||||| ||||    
T  16270180 catcaacacatcttaaacagcttcacagattataat 16270145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 239
Target Start/End: Original strand, 14038739 - 14038937
Alignment:
Q  42 ataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaacattaacatttcat 141  Q
    |||||||||| | ||  |||||||||||| ||| || || | |||| | |||||||||||||||| ||||||| ||||||| ||||||| ||||  |  |    
T  14038739 ataatatcaaatgcaagtcaacaacatctcaattatacattcatatttcaagtaatgcacataacattatatcacatcataatcaacatcaacacatgtt 14038838  T
Q  142 -aacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcct 239  Q
     |||||||||||||||| |||||||  || |   |||||| || |||||||| | ||| ||||||| | ||| || ||||||||| ||||||| |||||    
T  14038839 aaacagcttcacagattataattaatatcatcattaagtctcaatactaccccaaggttcaactcttagcaacttgtgcgacacagatcgcaaaatcct 14038937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 44052901 - 44053045
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat 121  Q
    |||| ||||||||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| ||||||||| |||||| ||||||| ||||||    
T  44052901 acaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgctcataacattatatcacatcat 44052999  T
Q  122 attcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    | ||||||| | ||  || | |||||||||||||||| ||||||||    
T  44053000 aatcaacatcagcacatcttaaacagcttcacagattataattaac 44053045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 20157514 - 20157432
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||| |||| | || |||| |||||||||||| ||||||||||||||||  ||||||||||||||| | ||||||||||    
T  20157514 cagatcacatcaacggtataactttataatatcaatt-catttcaacaacatctagatcattcaataatatttcaagtaatgca 20157432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 43256205 - 43256080
Alignment:
Q  27 caacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatctcatcatattc 125  Q
    ||||| |||||| | ||||||||||||||| |||||||||||||| |  |||| |||||| |||||||||||||| ||||  ||||||| ||| ||| ||    
T  43256205 caacaacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataat-tcttaagtaatgcatataatattatatcacattataatc 43256107  T
Q  126 aacattaacatttcataacagcttcacag 154  Q
    |   ||||||||||| || ||||||||||    
T  43256106 a--cttaacatttcacaatagcttcacag 43256080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 7798846 - 7798958
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | |||||||||||| ||  ||| |||||||||||  ||||||| |||  | |||||||||||||||| || |||| || ||||    
T  7798846 acaaaaacagcatgacataataatatcaattgcaagtcatcaacatcttaaatattcaattatacttcaagtaatgcacataacattgtatcacaacata 7798945  T
Q  123 ttcaacattaaca 135  Q
     ||||||| ||||    
T  7798946 atcaacatcaaca 7798958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 12902829 - 12902978
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatctcatcat 121  Q
    |||| ||||||||||| | ||||||||||||  | |||| |||||||||||  |||| |||| ||| | |||||||||| | ||| ||||||| ||||||    
T  12902829 acaaaaacagcatgacataataatatcaattgtaattcatcaacatcttaaatattcaaatattat-tcaagtaatgcataaaacattatatcacatcat 12902927  T
Q  122 attcaacattaacatttcat-aacagcttcacagattgtaattaacttctt 171  Q
    | ||||||  ||||  || | |||||||||||||||| |||||||| ||||    
T  12902928 aatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 12902978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 7893775 - 7893874
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | |||||||||||| ||  |||||| ||||||||  ||||||| |||  | |||||||||||||| | |||| || |||||||    
T  7893775 acaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacataccattatttcacatcata 7893874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 43256433 - 43256386
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  43256433 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 43256386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 100
Target Start/End: Complemental strand, 4561363 - 4561306
Alignment:
Q  43 taatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||  |||||||||| || ||||||||||||||||  | ||||||||||    
T  4561363 taatatcaatttattttcaacaacttcctaatcattcaataataattcaagtaatgca 4561306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 6190636 - 6190677
Alignment:
Q  124 tcaacattaacatttcataacagcttcacagattgtaattaa 165  Q
    ||||||||||||| |||||||||||||||  |||||||||||    
T  6190636 tcaacattaacatctcataacagcttcacgaattgtaattaa 6190677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 23374386 - 23374302
Alignment:
Q  45 atatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatctcatcatattcaaca 129  Q
    ||||||||| || ||||||||||||||||  |||| |||||| ||| |||||||||| | ||| ||||||| ||||||| ||||||    
T  23374386 atatcaattgcaattcaacaacatcttaaatattcaaataat-tctcaagtaatgcataaaacattatatcacatcataatcaaca 23374302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 6899981 - 6900061
Alignment:
Q  42 ataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||||||||| | ||  |||||||||||||||  ||||||| |||  | |||||||| ||||||| ||||||| |||||||    
T  6899981 ataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgtacataacattatatcacatcata 6900061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 9 - 251
Target Start/End: Complemental strand, 16411 - 16170
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 108  Q
    |||||||||| |||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16411 agcataggcatatcacaacaacatcatgacttcataatatcaatta-atttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacat 16313  T
Q  109 tatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaa 208  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  16312 tatatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcatattactacccaagggtccacctctaa 16213  T
Q  209 tcaaattatgcgacacatatcgcaatatcctgacttgcactca 251  Q
    ||||||||||||||||| ||||||| | ||| |||||||||||    
T  16212 tcaaattatgcgacacagatcgcaacaacctcacttgcactca 16170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 23776898 - 23776654
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 108  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23776898 agcataggcagatcacaacatcagcatgacttcttaatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacat 23776799  T
Q  109 tatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaa 208  Q
    |||||  ||||||||||||||| |||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||| ||| ||||| ||||||    
T  23776798 tatataacatcatattcaacatcaacatttcataacagcttcacaaattgcagttaacttcttatataggtcacattactacctaagtgtccatctctaa 23776699  T
Q  209 tcaaattatgcgacacata-tcgcaatatcctgacttgcactcag 252  Q
     |||||||||||||||| | ||||||||||||  |||||||||||    
T  23776698 ccaaattatgcgacacagattcgcaatatcctagcttgcactcag 23776654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 19899258 - 19899394
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  19899258 catcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattactacccaagggtccatctctaatcaaatt 19899357  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| ||||||| ||||| ||||||||||||    
T  19899358 atgcgacacagatcgcaacatcctcacttgcactcag 19899394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 17353893 - 17353757
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||    
T  17353893 catcatattcaacataaacatttcataacagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcgaatt 17353794  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  17353793 atgcgacacaaatcgcaatatcctcacttgcactcag 17353757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 200
Target Start/End: Complemental strand, 20466098 - 20465911
Alignment:
Q  12 ataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgtta 110  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||  ||| | |||    
T  20466098 ataggcagatcacaacaacaacataacttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgcaattaatcatta 20466000  T
Q  111 tatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtcc 200  Q
     ||| ||| ||| ||||| ||| ||||||||||||||||||||||||| | ||||| ||||||||| |||||||||||||| ||||||||    
T  20465999 aatcacattataatcaac-ttagcatttcataacagcttcacagattgcagttaacctcttatataggtcacattactacctaagggtcc 20465911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 19983256 - 19983392
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||||||||||| || |||| |||||||||||||    
T  19983256 catcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttaaataggtcacattactacccagggttccatctctaatcaaatt 19983355  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| ||||||| ||||| | ||||||||||    
T  19983356 atgcgacacagatcgcaacatcctcatttgcactcag 19983392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 21168677 - 21168541
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| || | |||||||||||| |||||| ||||||||||| |    
T  21168677 catcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaact 21168578  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| ||||||| ||||| ||||||||||||    
T  21168577 atgcgacacagatcgcaacatcctcacttgcactcag 21168541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 30643346 - 30643116
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||  ||| | ||| |||     
T  30643346 cagatcacaacaacaacataacttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatca 30643248  T
Q  116 catcatattcaacattaacatttcataacagc-ttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaat 214  Q
     || ||| ||||| |||||| ||| ||||||| ||||||||||| | ||||| ||||| ||| |||||||||||||| ||||||||||| |||||||| |    
T  30643247 tattataatcaac-ttaacagttcgtaacagctttcacagattgcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaatt 30643149  T
Q  215 tatgcgacacatatcgcaatatcctgacttgca 247  Q
    | ||||| ||| ||||||| ||||| |||||||    
T  30643148 tgtgcgaaacagatcgcaacatcctaacttgca 30643116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 21162014 - 21161878
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| || | |||||||||||| |||||| ||||||||||| |    
T  21162014 catcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttgtataggttatattactacccaaaggtccatctctaatcaaact 21161915  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    || ||||||| ||||||| ||||| ||||||||||||    
T  21161914 atacgacacagatcgcaacatcctcacttgcactcag 21161878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 233
Target Start/End: Complemental strand, 17926768 - 17926546
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cg 107  Q
    ||||||||||||||| ||||||||||| | |||| |||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||  ||| |     
T  17926768 agcataggcagatcaaaacaacagcataatttcacaatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatca 17926670  T
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||| ||| ||| | |  |||| ||| || |||| ||||||||||||||||  ||||||| ||||| ||| |||||||||||||| ||||||||||| |||    
T  17926669 ttaaatcacattacaaacaac-ttagcagttca-aacagcttcacagatttcaattaacatcttaaataggtcacattactacctaagggtccaacccta 17926572  T
Q  208 atcaaattatgcgacacatatcgcaa 233  Q
    ||||| |||||||| ||| |||||||    
T  17926571 atcaatttatgcgaaacagatcgcaa 17926546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 16184899 - 16185027
Alignment:
Q  124 tcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgaca 223  Q
    ||||||||||||| ||||| ||||||||||||||| | ||||| ||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||    
T  16184899 tcaacattaacatctcatatcagcttcacagattgcagttaacatcttatataggtcacattactacccaggggtccatctctaatcaaattatgcgaca 16184998  T
Q  224 catatcgcaatatcctgacttgcactcag 252  Q
    ||  |||||| ||||| ||||||| ||||    
T  16184999 caggtcgcaacatcctaacttgcattcag 16185027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 16410316 - 16410075
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cg 107  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||| ||||||||||||||||| ||||||||||||||| | ||||||||||  ||| |     
T  16410316 agcataggcagatcacaacaacagcataatttcataataccaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatca 16410218  T
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||| ||| ||| | |  |||| ||| || |||| |||||| ||||| |||  | ||||  ||||| ||| |||||||||||||| ||||||||||| |||    
T  16410217 ttaaatcacattacaaacaac-ttagcagttca-aacagcctcacatatttcagttaatatcttaaataggtcacattactacctaagggtccaacccta 16410120  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||| || ||||||||| ||||||| ||||| | ||||| ||||    
T  16410119 atcaatttgtgcgacacagatcgcaacatcctaatttgcattcag 16410075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 21395910 - 21395802
Alignment:
Q  144 cagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgact 243  Q
    ||||||||||||||  ||||||||||||||||| ||| |||||||||||||||||||| |||||||||||| |||||||||| |||||| | |||| |||    
T  21395910 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcact 21395811  T
Q  244 tgcactcag 252  Q
    |||||||||    
T  21395810 tgcactcag 21395802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 21790403 - 21790295
Alignment:
Q  144 cagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgact 243  Q
    ||||||||||||||  ||||||||||||||||| ||| |||||||||||||||||||| |||||||||||| |||||||||| |||||| | |||| |||    
T  21790403 cagcttcacagattacaattaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcact 21790304  T
Q  244 tgcactcag 252  Q
    |||||||||    
T  21790303 tgcactcag 21790295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 24755898 - 24756020
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatc 229  Q
    ||||||||||||||||||||||||||||| | ||||| || |||||| |||||||||||||||||||||||| |||||| ||| ||||||||||||  ||    
T  24755898 ttaacatttcataacagcttcacagattgcagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtc 24755997  T
Q  230 gcaatatcctgacttgcactcag 252  Q
    ||||  | || ||||||||||||    
T  24755998 gcaaagttctcacttgcactcag 24756020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 15603071 - 15602842
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    ||||||||| ||||||||  | ||||||||||| ||| ||||||||||||||||| ||||||||||||||| | ||||||||||  ||| | ||| |||     
T  15603071 cagatcacatcaacagcaaaatttcataatatcgatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatca 15602973  T
Q  116 catcatattcaacattaaca-tttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaat 214  Q
    ||| | |  |||| ||| || ||||| ||||||||||||||||  | ||||| ||||| ||| |||||||||||||  ||||||||||| |||||||| |    
T  15602972 cattacagacaac-ttagcagtttca-aacagcttcacagatttcagttaacatcttaaataggtcacattactacttaagggtccaaccctaatcaact 15602875  T
Q  215 tatgcgacacatatcgcaatatcctgacttgca 247  Q
    ||||||| ||| ||||||| || || |||||||    
T  15602874 tatgcgaaacagatcgcaacatactaacttgca 15602842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 15611523 - 15611294
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    ||||||||| ||||||||  | ||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||  ||| | ||| |||     
T  15611523 cagatcacatcaacagcaaaatttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatca 15611425  T
Q  116 catcatattcaacattaaca-tttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaat 214  Q
    ||| | |  |||| |||  | ||||| ||||||||||||||||  | ||||| ||||| ||| |||||||||||||  ||||||||||| |||||||| |    
T  15611424 cattacagacaac-ttagtagtttca-aacagcttcacagatttcagttaacatcttaaataggtcacattactacttaagggtccaaccctaatcaact 15611327  T
Q  215 tatgcgacacatatcgcaatatcctgacttgca 247  Q
    ||||||| ||| ||||||| || || |||||||    
T  15611326 tatgcgaaacagatcgcaacatactaacttgca 15611294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 21389380 - 21389272
Alignment:
Q  144 cagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgact 243  Q
    |||||||||| |||  |||||||||| |||||  ||| |||||||||||||||||||| |||||||||||| |||||||||| |||||| | |||| |||    
T  21389380 cagcttcacatattacaattaacttcatatattggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcact 21389281  T
Q  244 tgcactcag 252  Q
    |||||||||    
T  21389280 tgcactcag 21389272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 377455 - 377537
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaa 212  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||| |||||||||||||| ||||||||| | ||||||||    
T  377455 ttaacatttcataacagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccctaatcaa 377537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 19976654 - 19976744
Alignment:
Q  162 ttaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||||||| ||| |||||||||||||| | || |||| ||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  19976654 ttaacttcttaaataggtcacattactacctagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcag 19976744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 18678165 - 18678069
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa 105  Q
    ||||||||||||| ||| |||||||| ||| | | |||||||||| || ||||||||||||||||  |||||||||||||| |||||||||||||||    
T  18678165 agcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatcttaaatattcaataatatctcaagtaatgcacataa 18678069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 23648613 - 23648769
Alignment:
Q  11 cataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgtta 110  Q
    ||||||||||| ||||||||| |||||| | ||||||||| || || | ||||||||||||||  ||||||||| |  | |||||||||||| ||| |||    
T  23648613 cataggcagattacaacaacaacatgacataataatatcatttgcaatacaacaacatcttaaatattcaataaaacttcaagtaatgcacacaacatta 23648712  T
Q  111 tatctcatcatattcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    |||| ||||||| ||||||| ||||  || | |||||||| ||||||| ||||||||    
T  23648713 tatcacatcataatcaacatcaacacatcttaaacagcttaacagattataattaac 23648769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 32121790 - 32121886
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa 105  Q
    ||||||||||||| ||| |||||||| ||| | | |||||||||| || ||||||||||||||||  |||||||||||||| |||||||||||||||    
T  32121790 agcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaacaacatcttaaatattcaataatatctcaagtaatgcacataa 32121886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 18818458 - 18818314
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | ||||||||||||  |  |||||| ||||||||  ||||||| |||  | |||||||||||||||| ||||||| || ||||    
T  18818458 acaaaaacagcatgacataataatatcaattgtaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacataacattatatcacaacata 18818359  T
Q  123 ttcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
     ||||||| ||||  || | |||||||||||||||| ||||||||    
T  18818358 atcaacatcaacacatcttaaacagcttcacagattataattaac 18818314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 20536263 - 20536424
Alignment:
Q  6 agaagcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacata 104  Q
    |||| |||||||||   |||| ||||||||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| ||||||||||||||    
T  20536263 agaaacataggcagtatacaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcacata 20536361  T
Q  105 acgttatatctcatcatattcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    || ||||||| ||||||| || |||| ||||  || | |||| ||||||||||| ||||||||    
T  20536362 acattatatcacatcataatcgacatcaacacatcttaaacaacttcacagattataattaac 20536424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 19259524 - 19259443
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatca 211  Q
    |||||| ||||||| |||||||||||||| | ||||| |||| |||| |||||||||||||| ||||||||| | |||||||    
T  19259524 ttaacagttcataatagcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatccctaatca 19259443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 21923977 - 21923833
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| |||| |||||| | |||||||||||| ||  |||||||||||||||  ||||||| |||  | |||||||||||||||| |||| |  |||||||    
T  21923977 acaaaaacaacatgacatgataatatcaattgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgcacataaccttattttgcatcata 21923878  T
Q  123 ttcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
     ||||||  ||||  || | |||||||||||||||| ||||||||    
T  21923877 atcaacaacaacacatcttaaacagcttcacagattataattaac 21923833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 16861345 - 16861300
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatg 98  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||    
T  16861345 ttcatttcaacaacatcttaatcattcaataatatttcaagtaatg 16861300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 21919049 - 21918905
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattc-aataatatctt-aagtaatgcacataacgttatatctcatca 120  Q
    |||| ||||||||||| | |||||||||||| || ||||||||||||||||  |||| |||||| |||| |||||||||| | ||| ||||||| |||||    
T  21919049 acaaaaacagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataat-tcttcaagtaatgcata-aacattatatcacatca 21918952  T
Q  121 tattcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    || ||| ||  ||||  || | ||||||||||||||| |||||||||    
T  21918951 taatcagcagcaacacatcttaaacagcttcacagatcgtaattaac 21918905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 18879266 - 18879142
Alignment:
Q  42 ataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcatattcaacattaacatttca 140  Q
    |||||||||||| || |||| |||||||||||  ||||||  || |||| ||||||||| |||||| ||||||| ||||||| ||||||| | ||  ||     
T  18879266 ataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgctcataacattatatcacatcataatcaacatcagcacatct 18879168  T
Q  141 taacagcttcacagattgtaattaac 166  Q
    || |||||||||||||| || |||||    
T  18879167 tatcagcttcacagattatagttaac 18879142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 28649088 - 28648949
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  |||||||||||||||| || || | |||  | ||||||||   ||||| ||||||| ||||||| ||||    
T  28649088 aacagcatgacataataatatcaaatgcaagtcaacaacatcttaattatacattcataattcaagtaatgtgtataacattatatcacatcataatcaa 28648989  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    ||| ||||  || | |||||||||||| ||| ||||||||    
T  28648988 catcaacacatcttaaacagcttcacatattataattaac 28648949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 83
Target Start/End: Original strand, 21383738 - 21383768
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaata 83  Q
    |||||||||||||||||||||||||||||||    
T  21383738 ttcatttcaacaacatcttaatcattcaata 21383768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 239
Target Start/End: Original strand, 6759406 - 6759545
Alignment:
Q  102 ataacgttatatctcatcatattcaacattaacatttcataa--cagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtc 199  Q
    ||||| ||||||| ||||||| ||||||| ||||  || |||  |||||||||||||| |||||||| || |   |||||| || |||||||| | |||     
T  6759406 ataacattatatcacatcataatcaacatcaacacatcttaaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggtt 6759505  T
Q  200 caactctaatcaaattatgcgacacatatcgcaatatcct 239  Q
    ||||||| | ||| || ||||||||| || |||| |||||    
T  6759506 caactcttagcaacttgtgcgacacagattgcaaaatcct 6759545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 16092391 - 16092279
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | |||||||||| | ||  |||||||||||| ||  || || | |||  |||||||||||  ||||| ||||||| |||||||    
T  16092391 acaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataatttaagtaatgcgtataacattatatcacatcata 16092292  T
Q  123 ttcaacattaaca 135  Q
     ||||||| ||||    
T  16092291 atcaacatcaaca 16092279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 6e-89; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 21873308 - 21873548
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 108  Q
    |||||||||||   |||||| ||||||||||||||||||||||| ||||||||||   ||||||| |||||||||||||||||||||||||||||||| |    
T  21873308 agcataggcaggatacaacatcagcatgacttcataatatcaatctcatttcaac---atcttaaccattcaataatatcttaagtaatgcacataacat 21873404  T
Q  109 tatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaa 208  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||| || ||||||    
T  21873405 tatatcacatcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggttcatctctaa 21873504  T
Q  209 tcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||    
T  21873505 tcaaattatgcgacacagatctcaatatcctaacttgcactcag 21873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 26 - 252
Target Start/End: Original strand, 37723976 - 37724203
Alignment:
Q  26 acaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatatt 124  Q
    ||||||||||||| | || ||||||| || | |||| |||||||| ||||||||| | |||  | ||||||||||  ||| | ||||||| |||||||||    
T  37723976 acaacagcatgacatgattatatcaaattaaattcatcaacatctcaatcattcattcataattcaagtaatgcaattaaacattatatcacatcatatt 37724075  T
Q  125 caacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacac 224  Q
    ||||| |||||| ||| ||||||||||||||||| | ||||||||||||||| ||| || ||||||| ||||||||| ||||||||||||||||||||||    
T  37724076 caacactaacatctcaaaacagcttcacagattgcagttaacttcttatataggtctcaatactaccgaagggtccatctctaatcaaattatgcgacac 37724175  T
Q  225 atatcgcaatatcctgacttgcactcag 252  Q
    | |||||||| |||| ||||||||||||    
T  37724176 agatcgcaatctcctcacttgcactcag 37724203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 14079311 - 14079447
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    |||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||    
T  14079311 catcatattcaacattaacatttcataagagcttcacagattgcagttaacttcttaaataggtcacattactacccaggggtccatctctaatcaaatt 14079410  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| ||||||| ||||| ||||||||||||    
T  14079411 atgcgacacagatcgcaacatcctcacttgcactcag 14079447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 23501301 - 23501165
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||    
T  23501301 catcatattcaacattaacaattcataacagcttcacagattgcaattaacttcttatataggtctcattactacccaagggtccatctctaatcaactt 23501202  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    || ||||||| ||||||| || || |||| |||||||    
T  23501201 atacgacacagatcgcaacattctcactttcactcag 23501165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 118 - 252
Target Start/End: Original strand, 23201533 - 23201668
Alignment:
Q  118 tcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattacta-cccaagggtccaactctaatcaaatta 216  Q
    |||||||||||||||||| |||||||||||||||||||||| | |||||||||| |||| ||| |||||||| |||||||||||| |||||| |||||||    
T  23201533 tcatattcaacattaacaattcataacagcttcacagattgcagttaacttcttctataggtctcattactaccccaagggtccatctctaaacaaatta 23201632  T
Q  217 tgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||||| ||||||||||||| ||||||||||||    
T  23201633 tgcgacacagatcgcaatatcctcacttgcactcag 23201668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 23512270 - 23512406
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||| |||| | ||||| |||||| | | ||||||||||||| |||| | ||||||||||||||||| |||||||||||||    
T  23512270 catcatattcaacattaacattttataagatcttcaaagattgcagtaaacttcttatataggtcataatactacccaagggtccacctctaatcaaatt 23512369  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| ||||||| ||||| || |||||||||    
T  23512370 atgcgacacagatcgcaacatcctaacatgcactcag 23512406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 26704233 - 26704365
Alignment:
Q  120 atattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgc 219  Q
    |||||||||| |||||| ||||||||||||||||||||| | ||||||||||||||| ||| |||||||||||||||||||| | |||||||||| ||||    
T  26704233 atattcaacactaacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgc 26704332  T
Q  220 gacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||| ||| || | |||| ||||||||||||    
T  26704333 gacacagatcacattttccttacttgcactcag 26704365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 120 - 252
Target Start/End: Original strand, 26973966 - 26974098
Alignment:
Q  120 atattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgc 219  Q
    |||||||||| |||||| ||||||||||||||||||||| | ||||||||||||||| ||| |||||||||||||||||||| | |||||||||| ||||    
T  26973966 atattcaacactaacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatccctaatcaaatcatgc 26974065  T
Q  220 gacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||| ||| || | |||| ||||||||||||    
T  26974066 gacacagatcacattttccttacttgcactcag 26974098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 21366719 - 21366486
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    |||||||||||||||  || ||||||| ||||||||| ||||||| ||||||||| ||||||||||||||| | ||||||||||  ||| | ||| |||     
T  21366719 cagatcacaacaacattat-acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatca 21366622  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||| ||| ||| | |||||| |||||| |||||||||||||   | ||||| ||||| ||| |||||||||||||| ||||||||||| |||||||| ||    
T  21366621 cattataatcagc-ttaacagttcatagcagcttcacagatctcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaattt 21366523  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||| ||| ||||||| || || ||||||| ||||    
T  21366522 atgcgaaacagatcgcaacatactaacttgcattcag 21366486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 22032479 - 22032615
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||  ||||| || || ||||||||||||||| | ||||||||||||||| ||| |||||||||| ||||||||| |||||||||| |     
T  22032479 catcatattcaacacaaacatctcgtatcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatctctaatcaattc 22032578  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    | || ||||||||| ||| || || ||||||||||||    
T  22032579 aagcaacacatatcacaacattctcacttgcactcag 22032615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 18769960 - 18769864
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaa 212  Q
    ||||||||||||||  ||||| ||||| ||||||||||||||| | ||||||||||||||| ||| |||||||||| ||||||||| | ||||||||    
T  18769960 catcatattcaacacaaacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 18769864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 17517264 - 17517168
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa 105  Q
    ||||||||||||| ||| |||||||| ||| | | |||||||||  || ||||||||||||||||  |||||||||||||| |||||||||||||||    
T  17517264 agcataggcagattacatcaacagcaagacataaaaatatcaatcgcaattcaacaacatcttaaatattcaataatatctcaagtaatgcacataa 17517168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 24493645 - 24493784
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  |||||||||||||||  ||||||| |||  | |||| ||||||||||| ||||||| ||||||| ||||    
T  24493645 aacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtgatgcacataacattatatcacatcataatcaa 24493744  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    ||| ||||| || | || ||||||||||||| ||||||||    
T  24493745 catcaacatatcttaaatagcttcacagattataattaac 24493784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 9078029 - 9078241
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  |||||||||||| ||| || || | ||| || |||||||||  ||||| ||||||| ||||||| ||||    
T  9078029 aacagcatgacataataatatcaagtgcaagtcaacaacatctcaattatacattcataactcaagtaatgcgtataacattatatcacatcataatcaa 9078128  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacat 226  Q
    ||| ||||  || | |||||||||||||||| |||||||| || |   |||||| || |||||||| | ||| |||| || | ||| || |||||||||     
T  9078129 catcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacacag 9078228  T
Q  227 atcgcaatatcct 239  Q
    ||||||| |||||    
T  9078229 atcgcaaaatcct 9078241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 20805606 - 20805846
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cg 107  Q
    |||||||||||||||||| ||||  || | ||||||||||||||| |||| |||||||||||  |||||||||||| || | ||||||||||  ||| |     
T  20805606 agcataggcagatcacaagaacaaaataatttcataatatcaatt-catt-caacaacatctagatcattcaataacatttcaagtaatgcatttaatca 20805703  T
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||| ||| ||| |     ||| ||| || |||| |||||| |||||||||  | ||||| ||||| ||| |||||||||||||| ||||||| ||| |||    
T  20805704 ttaaatcacattaccaataac-ttagcagttca-aacagcctcacagatttcagttaacatcttaaataggtcacattactacctaagggtcaaacccta 20805801  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||| || ||||||||| ||||||| ||||| | ||||| ||||    
T  20805802 atcaatttgtgcgacacagatcgcaacatcctaatttgcattcag 20805846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 25421604 - 25421748
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| |||| |||||| | |||||||||||| ||  |||||| ||||||||  ||||||| |||  | |||||||||||||||| ||||||| |||||||    
T  25421604 acaaaaacaacatgacataataatatcaattgcaagtcaacagcatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcata 25421703  T
Q  123 ttcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
     ||||||| |||   || | |||||||||||||||| ||||||||    
T  25421704 atcaacatcaacgcatcttaaacagcttcacagattataattaac 25421748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 25431466 - 25431610
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| |||| |||||| | |||||||||||| ||  |||||||||||||||   |||||| |||  | |||||||||||||||| ||||||| |||||||    
T  25431466 acaaaaacaacatgacataataatatcaattgcaagtcaacaacatcttaaatgttcaattatacttcaagtaatgcacataacattatatcacatcata 25431565  T
Q  123 ttcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
     ||||||| |||   || | |||||||||||||||| ||||||||    
T  25431566 atcaacatcaacgcatcttaaacagcttcacagattataattaac 25431610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 24767600 - 24767518
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||| ||| || || |||| |||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  24767600 cagatcacatcaatagtataactttataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 24767518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 23390545 - 23390401
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat 121  Q
    |||| |||| |||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| |||||||||||||||| ||||||| ||||||    
T  23390545 acaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcacataacattatatcacatcat 23390447  T
Q  122 attcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    | ||||||| ||||  || | || ||||||||||||| ||||||||    
T  23390446 aatcaacatcaacacatcttaaatagcttcacagattataattaac 23390401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 206
Target Start/End: Complemental strand, 8286886 - 8286707
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcatattca 126  Q
    ||||||||||| | |||||||||||| || |||| |||||||||||  | ||||  || |||| |||||||||||||||| ||||||| ||||||| |||    
T  8286886 aacagcatgacataataatatcaattgcaattcatcaacatcttaaataatcaaacat-tcttcaagtaatgcacataacattatatcacatcataatca 8286788  T
Q  127 acattaacatttcat-aacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactct 206  Q
    |||| ||||  || | |||||||||||| | | |||||||| ||||   ||||||  | |||||||||| ||| |||||||    
T  8286787 acatcaacacatcttaaacagcttcacataatataattaacatcttcattaagtcttaatactacccaaaggttcaactct 8286707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 154
Target Start/End: Complemental strand, 20910843 - 20910719
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaa-taatatcttaagtaatgcacataacgttatatctcatcatattca 126  Q
    ||||||||||| | ||||||||||||||| |||||||||||||| | ||||||| |||| |||||||||||||| | ||| ||||||| ||| ||| |||    
T  20910843 aacagcatgacataataatatcaatttcaattcaacaacatcttgaacattcaaataat-tcttaagtaatgcataaaacattatatcacattataatca 20910745  T
Q  127 acattaacatttcataacagcttcacag 154  Q
       ||| ||||||| || ||||||||||    
T  20910744 --cttagcatttcacaatagcttcacag 20910719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 24529328 - 24529436
Alignment:
Q  59 tcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaacattaacatttcat-aacagcttcacagatt 157  Q
    |||||||||||||||| || || | |||||| |||||||||  ||||| ||||||| ||||||||||||||| ||||  || | ||||||||||||||||    
T  24529328 tcaacaacatcttaattatacattcatatctcaagtaatgcttataacattatatcacatcatattcaacatcaacacatcttaaacagcttcacagatt 24529427  T
Q  158 gtaattaac 166  Q
     || |||||    
T  24529428 atagttaac 24529436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 1859031 - 1858950
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||||  || ||||||||| | ||||| ||||||||||||||| ||||||||||||||||| | ||||||||||    
T  1859031 cagatcacaacaacattat-acttcataacaacaatt-catttcaacaacatcataatcattcaataatatttcaagtaatgca 1858950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 18356390 - 18356514
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||  | ||||||||||||||| |||||||||||||| |  ||||||  || |||||||||||||| | ||| ||||||| ||| ||| |||     
T  18356390 aacagcatgatataataatatcaatttcaattcaacaacatcttgaatattcaaatatttcttaagtaatgcataaaacattatatcacattataatca- 18356488  T
Q  128 cattaacatttcataacagcttcacag 154  Q
      ||||||||||| || ||||||||||    
T  18356489 -cttaacatttcacaatagcttcacag 18356514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 20767028 - 20767117
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||| |||||||||||| ||| | ||||||||||||| |||| |||||||||||||  |||||||||||| || | ||||||||||    
T  20767028 agcataggcaaatcacaacaacaacataagttcataatatcaa-ttca-ttcaacaacatctagatcattcaataacatttcaagtaatgca 20767117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 23451410 - 23451491
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||||  || ||||||||| ||||||| | ||||||||||||| ||||||||||||||||| | ||||||||||    
T  23451410 cagatcacaacaacattat-acttcataacatcaatt-cttttcaacaacatcataatcattcaataatatttcaagtaatgca 23451491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 22075101 - 22075240
Alignment:
Q  33 catgacttcataatatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatctcatcatattcaacatt 131  Q
    |||||| | |||||||||||| || ||||||||||||||||  |||| |||||| ||| |||||||||| | ||| ||||||| ||||||| ||||||      
T  22075101 catgacataataatatcaattgcaattcaacaacatcttaaatattcaaataat-tctcaagtaatgcataaaacattatatcacatcataatcaacaac 22075199  T
Q  132 aacatttcat-aacagcttcacagattgtaattaacttctt 171  Q
    ||||  || | |||||||||||| ||| |||||||| ||||    
T  22075200 aacacatcttaaacagcttcacatattataattaacctctt 22075240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 23572258 - 23572338
Alignment:
Q  132 aacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaa 212  Q
    ||||| ||||| || ||||||| |||| | ||||||||||||||| ||| |||||||||| ||||||||| | ||||||||    
T  23572258 aacatctcatatcaacttcacaaattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 23572338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 23458643 - 23458735
Alignment:
Q  6 agaagcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||  |||||||||||||||  || ||||||||| | ||||| | |||||||| |||| ||||||||||||||||| | ||||||||||    
T  23458643 agaagcataatcagatcacaacaacactat-acttcataacagcaatt-cttttcaacagcatcataatcattcaataatatttcaagtaatgca 23458735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 23462904 - 23462996
Alignment:
Q  6 agaagcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||  |||||||||||||||  || ||||||||| | ||||| | |||||||| |||| ||||||||||||||||| | ||||||||||    
T  23462904 agaagcataatcagatcacaacaacactat-acttcataacagcaatt-cttttcaacagcatcataatcattcaataatatttcaagtaatgca 23462996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 18356042 - 18356089
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  18356042 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 18356089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 20911191 - 20911144
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  20911191 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 20911144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 21808431 - 21808347
Alignment:
Q  30 cagcatgacttcataatatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatc 114  Q
    ||||||||| | |||||||||||| || ||||||||||||||||  |||| |||||| ||| |||||||||| | ||| |||||||    
T  21808431 cagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataat-tctcaagtaatgcataaaacattatatc 21808347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 13025418 - 13025526
Alignment:
Q  59 tcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaacattaacatttcat-aacagcttcacagatt 157  Q
    |||||||||||||||  ||||||| |||  | || ||||| ||||||| ||||||| |||| || ||||||| ||||| || | |||| ||||||| |||    
T  13025418 tcaacaacatcttaaatattcaattatacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatatt 13025517  T
Q  158 gtaattaac 166  Q
     ||||||||    
T  13025518 ataattaac 13025526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 13095602 - 13095710
Alignment:
Q  59 tcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaacattaacatttcat-aacagcttcacagatt 157  Q
    |||||||||||||||  ||||||| |||  | || ||||| ||||||| ||||||| |||| || ||||||| ||||| || | |||| ||||||| |||    
T  13095602 tcaacaacatcttaaatattcaattatacttcaaataatgtacataacattatatcacatcgtaatcaacatcaacatatcttaaacaacttcacatatt 13095701  T
Q  158 gtaattaac 166  Q
     ||||||||    
T  13095702 ataattaac 13095710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 41 - 252
Target Start/End: Complemental strand, 1258 - 1047
Alignment:
Q  41 cataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaacattaacatttca 140  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  1258 cataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaaataatgcacataacattatatcacatcatattcaacattaatatttca 1159  T
Q  141 taacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctg 240  Q
    |||||||||||| ||||| | ||||||||||||||| |||| |||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||     
T  1158 taacagcttcactgattgcagttaacttcttatataggtcatattactacccaaggatccatctctaatcaaattatgcgacacagatcgcaatatcctc 1059  T
Q  241 acttgcactcag 252  Q
    ||||||||||||    
T  1058 acttgcactcag 1047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 21788105 - 21787862
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 108  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21788105 agcataggcagatcacaacaacagcatgacttcgtaatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacat 21788006  T
Q  109 tatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaa 208  Q
    |||||  ||||||| ||||||| ||||||||||||||||| || |||||| | ||||||||||||||| || ||||||||||||||||||||| ||||||    
T  21788005 tatataacatcataatcaacatcaacatttcataacagctgcatagattgcagttaacttcttatataggttacattactacccaagggtccatctctaa 21787906  T
Q  209 tcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
     ||| ||||||||||||  ||||||  | || ||||||||||||    
T  21787905 acaagttatgcgacacaggtcgcaaatttctcacttgcactcag 21787862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 252
Target Start/End: Complemental strand, 22468757 - 22468516
Alignment:
Q  11 cataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgtta 110  Q
    ||||||||||| |||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||| |||||||||||||||| |||    
T  22468757 cataggcagattacaacaacagcatgacatcataatatcaattgcaattcaacaacatcttaattattcaataatatctcaagtaatgcacataacatta 22468658  T
Q  111 tatctcatcatattcaacattaacatttcat-aacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaat 209  Q
    |||| ||||||| |  |||| | ||  || | |||||||||||||||| |||||| |  |||  | | ||| || ||||||||||||||||| |||||||    
T  22468657 tatcacatcataat-tacatcagcacatcttaaacagcttcacagattataattaccaacttcaaaaggtctcaatactacccaagggtccatctctaat 22468559  T
Q  210 caaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    | |||||||||||||||||||||||| ||| ||||||||||||    
T  22468558 cgaattatgcgacacatatcgcaataccctcacttgcactcag 22468516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 18182175 - 18181941
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||| | ||||||||||  ||| | ||  |||     
T  18182175 cagatcacaacaacagcataacttcataatatcaattt-atttcaacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattgaatca 18182077  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||| |||  |||| ||| ||| ||||||||||||||||| ||| | ||||||||||||| |||||||||||||||| ||| ||||| | |||||||| ||    
T  18182076 cattataaacaac-ttagcatctcataacagcttcacagtttgcagttaacttcttatacaagtcacattactacctaagagtccatccctaatcaattt 18181978  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| ||||||| ||||| ||||||||||||    
T  18181977 atgcgacacagatcgcaacatcctaacttgcactcag 18181941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 63 - 252
Target Start/End: Original strand, 21714659 - 21714849
Alignment:
Q  63 caacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaa 161  Q
    |||||||| ||||||||| | |||  | ||||||||||  ||| | ||||||| |||||||||||||| |||||| ||||||||||||||||||||| |     
T  21714659 caacatctcaatcattcattcataattcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataacagcttcacagattgcag 21714758  T
Q  162 ttaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||||||| |||||||||| |||||| | |||| ||||||||||||    
T  21714759 ttaacttcttatataggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcag 21714849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 63 - 252
Target Start/End: Complemental strand, 42865221 - 42865031
Alignment:
Q  63 caacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaa 161  Q
    |||||||| ||||| ||| | ||| || ||||||||||  ||| | ||| ||| ||| ||| ||||||||||| ||||||||||||||||||||||| |     
T  42865221 caacatctcaatcactcattcataactcaagtaatgcaattaatcattaaatcacattataatcaacattaacctttcataacagcttcacagattgcag 42865122  T
Q  162 ttaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  42865121 ttaacatcttatataggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcag 42865031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 20091429 - 20091293
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    |||||||||||||||||||||  | |||||||||||||||||| | ||||||||||| ||| ||| |||||||||||||||||||| ||| |||||||||    
T  20091429 catcatattcaacattaacatcacgtaacagcttcacagattgcagttaacttcttaaataggtctcattactacccaagggtccatctcaaatcaaatt 20091330  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| ||||||||||||| | ||||||||||    
T  20091329 atgcgacacagatcgcaatatcctcatttgcactcag 20091293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 201
Target Start/End: Complemental strand, 22449320 - 22449137
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    ||||||||||||| ||||| | ||||||||||||||  | ||||||||||||||| ||||||||||||||| | |||||||| |  ||| | ||| |||     
T  22449320 cagatcacaacaagagcataatttcataatatcaata-cttttcaacaacatcttgatcattcaataatatttcaagtaatgaaattaatcattaaatca 22449222  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtcca 201  Q
    ||| ||| ||||| |||||| |||||||||||||||||||||| | ||||| ||||||||| |||||||||||||| |||||||||    
T  22449221 cattataatcaac-ttaacagttcataacagcttcacagattgcagttaacatcttatatatgtcacattactacctaagggtcca 22449137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 91 - 252
Target Start/End: Original strand, 48603654 - 48603816
Alignment:
Q  91 aagtaatgcacataacgttatatctcatcatattcaacattaacatttcataa-cagcttcacagattgtaattaacttcttatataagtcacattacta 189  Q
    |||||||||| | ||| ||||||| ||||||| ||||||  ||||  || ||| |||||||||||||| |||||||||||||||||| |||||| |||||    
T  48603654 aagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatacta 48603753  T
Q  190 cccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    || | ||||||| |||||||||| | |||| ||||| ||||||| ||||| ||||||||||||    
T  48603754 cctaggggtccatctctaatcaattcatgcaacacagatcgcaacatcctaacttgcactcag 48603816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 6152032 - 6152154
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatc 229  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||| |||||||||||||| ||| ||||| | |||||||| | |||||||||| |||    
T  6152032 ttaacatttcataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatc 6152131  T
Q  230 gcaatatcctgacttgcactcag 252  Q
    |||| ||||| || |||| ||||    
T  6152132 gcaacatcctaacatgcattcag 6152154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 252
Target Start/End: Complemental strand, 22831319 - 22831198
Alignment:
Q  131 taacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcg 230  Q
    |||||||||||||||||||||||||||| ||||||| || |||||| |||||||||||||| ||| ||||| | |||| ||| | |||||||||| ||||    
T  22831319 taacatttcataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaagtcatgcgacacagatcg 22831220  T
Q  231 caatatcctgacttgcactcag 252  Q
    ||| || || | ||||||||||    
T  22831219 caacattctcaattgcactcag 22831198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 8761689 - 8761529
Alignment:
Q  16 gcagatcacaacaacagcatgacttcataat-atcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatat 113  Q
    |||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||| || |||||||||||||| ||||||||||  ||| |  || ||    
T  8761689 gcagatcacaacaacaacataacttcataattatcaatt-catttcaacaacatcttgattattcaataatatctcaagtaatgcaattaatcaataaat 8761591  T
Q  114 ctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatata 176  Q
    | ||||||| | | | |||| | |||||||||||||||||||||  | ||||| |||||||||    
T  8761590 cacatcataattagc-ttaatagttcataacagcttcacagatttcatttaacatcttatata 8761529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 166
Target Start/End: Original strand, 20135245 - 20135403
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 108  Q
    ||||||||||||| ||||||||| |||||| | |||||||||  | || ||||||||||||||||  ||||||||| |  | |||||||||| | ||| |    
T  20135245 agcataggcagattacaacaacatcatgacataataatatcatgtgcaattcaacaacatcttaagtattcaataaaacttcaagtaatgcatacaacat 20135344  T
Q  109 tatatctcatcatattcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    ||||||  |||||| | ||||| ||||  || | |||||||||||||||| ||||||||    
T  20135345 tatatcatatcataatgaacatcaacacatcttaaacagcttcacagattataattaac 20135403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 21022815 - 21022899
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaat 214  Q
    |||||| ||||||| |||||||||||||| | ||||| ||||||||| |||||||||||||| ||||||||| |  |||||||||    
T  21022815 ttaacagttcataatagcttcacagattgcagttaacatcttatataggtcacattactacctaagggtccatccttaatcaaat 21022899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 22532341 - 22532453
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | |||||||| ||| || ||||||||||||||||  ||||| | |||  | |||||||||||||||| ||||||| |||||||    
T  22532341 acaaaaacagcatgacataataatatccattgcaattcaacaacatcttaaatattcattcataattcaagtaatgcacataacattatatcacatcata 22532440  T
Q  123 ttcaacattaaca 135  Q
     ||||||| ||||    
T  22532441 atcaacatcaaca 22532453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 34509852 - 34509996
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | || ||||||| | ||  |||||||||||||||| || || | |||||| |||||||||  ||||| ||||||| |||||||    
T  34509852 acaaaaacagcatgacataatgatatcaaatgcaagtcaacaacatcttaattatacattcatatctcaagtaatgcttataacattatatcacatcata 34509951  T
Q  123 ttcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    |||||||| ||||  || | |||||||||| ||||| ||||||||    
T  34509952 ttcaacatcaacacatcttaaacagcttcaaagattataattaac 34509996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 3472959 - 3472759
Alignment:
Q  37 acttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaaca 135  Q
    ||||||||||||||| | || |||||||||||||| ||||||||| ||||| | ||||||| ||  ||| | ||| ||| |||   |  |||| ||| ||    
T  3472959 acttcataatatcaaat-cacttcaacaacatcttgatcattcaacaatatttcaagtaattcatttaatcattaaatcacatttcaaacaac-ttagca 3472862  T
Q  136 tttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaata 235  Q
    ||||||||||||||||||||||   |||||| ||||| ||| |||||||||||||| ||| ||||||| |||||||  || ||||| ||| ||||||| |    
T  3472861 tttcataacagcttcacagattcccattaacatctta-ataggtcacattactacctaagagtccaaccctaatcagtttgtgcgaaacagatcgcaaca 3472763  T
Q  236 tcct 239  Q
    ||||    
T  3472762 tcct 3472759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 17678640 - 17678559
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||||  || ||||||||| | ||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  17678640 cagatcacaacaacattat-acttcataacaacaatt-catttcaacaacatcttaatcattcaataatatttcaagtaatgca 17678559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 27250778 - 27250629
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatctcatcat 121  Q
    |||| ||||||||||| | |||||||||||| || |||| |||||||||||  |||| |||| ||| | |||||||||| | ||| ||||||| ||||||    
T  27250778 acaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatattat-tcaagtaatgcataaaacattatatcacatcat 27250680  T
Q  122 attcaacattaacatttcat-aacagcttcacagattgtaattaacttctt 171  Q
    | ||||||  ||||  || | |||||||||||||||| |||||||| ||||    
T  27250679 aatcaacaacaacacatcttaaacagcttcacagattataattaacctctt 27250629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 171
Target Start/End: Original strand, 21026774 - 21026901
Alignment:
Q  45 atatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatctcatcatattcaacattaacatttcat-a 142  Q
    ||||||||| || ||||||||||||||||  |||| |||||| ||| |||||||||| | ||| ||||||| ||||||| ||||||  ||||  || | |    
T  21026774 atatcaattgcaattcaacaacatcttaaatattcaaataat-tctcaagtaatgcataaaacattatatcacatcataatcaacagcaacacatcttaa 21026872  T
Q  143 acagcttcacagattgtaattaacttctt 171  Q
    ||||||||||||||| |||||||| ||||    
T  21026873 acagcttcacagattataattaacctctt 21026901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 22354616 - 22354477
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcatattca 126  Q
    ||||||||||| | | |||||||||| || |||| |||||||||||  ||||||  || |||| |||||||| | ||||| ||||||| ||||||| |||    
T  22354616 aacagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgtatataacattatatcacatcataatca 22354518  T
Q  127 acattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    |||| ||||  || | |||||||||||||||| ||||||||    
T  22354517 acatcaacacatcttaaacagcttcacagattataattaac 22354477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 33797596 - 33797720
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatctcatcatattca 126  Q
    |||| |||||| | ||||||||||||||| |||||||||||||| |  |||| |||||| |||||||||||||| | ||| ||||||| ||| ||| |||    
T  33797596 aacaacatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataat-tcttaagtaatgcataaaacattatatcacattataatca 33797694  T
Q  127 acattaacatttcataacagcttcacag 154  Q
       ||||||||||| || ||||||||||    
T  33797695 --cttaacatttcacaatagcttcacag 33797720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 20229165 - 20229118
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  20229165 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 20229118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 33797367 - 33797401
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatat 87  Q
    ||||||||||||||||||| |||||||||||||||    
T  33797367 ttcatttcaacaacatcttgatcattcaataatat 33797401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 18393906 - 18393845
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacc 191  Q
    |||||| ||||||||||||||||||||   | ||||| ||||| ||| ||||||||||||||    
T  18393906 ttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattactacc 18393845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 206
Target Start/End: Complemental strand, 50210182 - 50210078
Alignment:
Q  103 taacgttatatctcatcatattcaacattaacatttcataa-cagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtcca 201  Q
    |||| ||||||| ||||||| ||||||| ||||  || ||| |||||||||||||| |||||||| || |   |||||| || |||||||||| ||| ||    
T  50210182 taacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaatactacccaaaggttca 50210083  T
Q  202 actct 206  Q
    |||||    
T  50210082 actct 50210078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 9 - 187
Target Start/End: Complemental strand, 4867 - 4690
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 108  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  4867 agcataggcagatcacaacaacagcttgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatatacataacgt 4768  T
Q  109 tatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattac 187  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||| ||||||||||    
T  4767 tatatcacatcatattcaacattaacatttcat-acagcttcacagattgcagttaacttcttatataggtcacattac 4690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 46789 - 46547
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cg 107  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| |||||| |||||||||| ||||||||||||||| | ||||||||||  ||| |     
T  46789 agcataggcagatcacaacaatagcataacttcataatatcaatt-catttccacaacatcttgatcattcaataatatttcaagtaatgcaattaatca 46691  T
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||| ||| ||| ||| ||||| ||| ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| ||| ||||| | |||    
T  46690 ttaaatcacattataatcaac-ttagcatttcataacagcttcacagattgcagttaacttcttatataggtcacattactacctaagagtccatcccta 46592  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||| |||||||||||| ||||||| ||||| ||||||||||||    
T  46591 atcaatttatgcgacacagatcgcaacatcctaacttgcactcag 46547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 18403 - 18539
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  18403 catcataatcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaatt 18502  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||||||||||||||||| ||||||||||||    
T  18503 atgcgacacatatcgcaatatcctcacttgcactcag 18539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 3e-57; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 17525108 - 17524972
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  17525108 catcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattactacccaagggtccatctctaatcaaatt 17525009  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  17525008 atgcgacacagatcgcaatatcctcacttgcactcag 17524972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 108 - 249
Target Start/End: Original strand, 23408587 - 23408728
Alignment:
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||||||||| | ||||||||| | ||| || ||| ||||||||||||||||| |||||    
T  23408587 ttatatcacatcatattcaacactaacatctcataacagcttcacagattgcagttaacttctaaaataggtaacaatactacccaagggtccatctcta 23408686  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcact 249  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  23408687 atcaaattatgcgacacagatcgcaatatcctcacttgcact 23408728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 116 - 239
Target Start/End: Complemental strand, 14878462 - 14878338
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactaccca-agggtccaactctaatcaaat 214  Q
    |||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  14878462 catcatattcaacattaacatttcataatagcttcacagattgcagttaacttcttatataagtcacattactacctagggggtccatctctaatcaaat 14878363  T
Q  215 tatgcgacacatatcgcaatatcct 239  Q
    ||||||||||| |||||||||||||    
T  14878362 tatgcgacacagatcgcaatatcct 14878338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 37 - 251
Target Start/End: Original strand, 11862875 - 11863088
Alignment:
Q  37 acttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaaca 135  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||||||| | ||||||||||  ||| | ||| ||| ||||||| ||| | ||||||    
T  11862875 acttcataatatcaatt-catttcaacaacatcttggtcattcaataatatttcaagtaatgcaattaatcattaaatcacatcataatcagc-ttaaca 11862972  T
Q  136 tttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaata 235  Q
     |||||| ||||||||||||||  || |||| ||||| ||| ||||||||| |||| ||||||||||  |||||||| |||| ||| ||| ||||||| |    
T  11862973 gttcatagcagcttcacagatttcaaataacatcttaaataggtcacattaatacctaagggtccaatcctaatcaatttatacgaaacagatcgcaaca 11863072  T
Q  236 tcctgacttgcactca 251  Q
    |||| |||||||||||    
T  11863073 tcctaacttgcactca 11863088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 12496319 - 12496553
Alignment:
Q  17 cagatcacaacaacagcatgacttcataat-atcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatc 114  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||| |||||||||| ||||||||||||||| | ||||||||||  ||| | ||| |||    
T  12496319 cagatcacaacaacagcataacttcataattatcaatt-catttctacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatc 12496417  T
Q  115 tcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaat 214  Q
     ||| | |  |||| ||| || |||| ||||||||||||||||  | ||||| ||||| ||| |||||||||||||| ||||||||||| |||||||| |    
T  12496418 acattacaaacaac-ttagcagttca-aacagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaact 12496515  T
Q  215 tatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||| ||| ||||||| || || ||||||| ||||    
T  12496516 tatgcgaaacagatcgcaacatactaacttgcattcag 12496553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 19725965 - 19725739
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| | |||||||| |  ||| | ||| |||     
T  19725965 cagatcacatcaacagcatgact-cataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgtaattaatcattaaatca 19725868  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||| ||| ||| | |||||| |||||| ||| ||||||||||  | || || ||||| ||  |||||||||||||| ||||||||||| |||||||| ||    
T  19725867 cattataatcagc-ttaacagttcatagcagtttcacagatttcagttgacatcttaaatgggtcacattactacctaagggtccaaccctaatcaattt 19725769  T
Q  216 atgcgacacatatcgcaatatcctgacttg 245  Q
    |||||| ||| ||||||| ||||| |||||    
T  19725768 atgcgaaacagatcgcaacatcctaacttg 19725739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 37 - 247
Target Start/End: Original strand, 322673 - 322882
Alignment:
Q  37 acttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaaca 135  Q
    ||||||| ||||||||| ||||||| ||||||||| ||||||||||||||| | ||||||||||  ||| | ||| ||| ||| ||| ||| | ||||||    
T  322673 acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagc-ttaaca 322770  T
Q  136 tttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaata 235  Q
     ||||||||||||||||||||  || ||||| ||||| ||| |||||||||||||| ||||||||||| |||||||| |||||||| | | ||||||| |    
T  322771 cttcataacagcttcacagatcttagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaatttatgcgaaatagatcgcaaca 322870  T
Q  236 tcctgacttgca 247  Q
    | || |||||||    
T  322871 tactaacttgca 322882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 233
Target Start/End: Complemental strand, 11298590 - 11298368
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cg 107  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||  ||| |     
T  11298590 agcataggcagatcacaacaacaacataatttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatca 11298492  T
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||| ||| ||| | |  |||| ||| || |||| |||||| ||||| |||  | ||||  ||||| ||| |||||||||||||| ||||||||||| |||    
T  11298491 ttaaatcacattacaaacaac-ttagcagttca-aacagcctcacaaatttcagttaatatcttaaataggtcacattactacctaagggtccaacccta 11298394  T
Q  208 atcaaattatgcgacacatatcgcaa 233  Q
    ||||||||||| || ||| |||||||    
T  11298393 atcaaattatgagaaacagatcgcaa 11298368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 18383970 - 18383737
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    |||||||||||||||  || ||||||| ||||||||| ||||||| ||||||||| ||||||||||||||| | ||||||||||  ||| | ||| |||     
T  18383970 cagatcacaacaacattat-acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatca 18383873  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||| | | ||| | |||||| |||||||||||||||| |||   | ||||| ||||| ||| |||||||||||||| ||||||||||| |||||||| ||    
T  18383872 cattaaaatcagc-ttaacagttcataacagcttcactgatctcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaattt 18383774  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||| ||| ||||||| || || ||||||| ||||    
T  18383773 atgcgaaacagatcgcaacatactaacttgcattcag 18383737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 116 - 239
Target Start/End: Complemental strand, 23077434 - 23077311
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    |||||||  |||||| |||||||||||||||||||||| |||  | | ||||||| ||||| ||| |||||||||| ||||||||| |||||||||||||    
T  23077434 catcataaccaacataaacatttcataacagcttcacaaattacagtaaacttctcatataggtctcattactacctaagggtccatctctaatcaaatt 23077335  T
Q  216 atgcgacacatatcgcaatatcct 239  Q
    |||||||||| ||||||| |||||    
T  23077334 atgcgacacagatcgcaaaatcct 23077311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 252
Target Start/End: Complemental strand, 15877727 - 15877648
Alignment:
Q  173 tataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||| ||| |||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  15877727 tataggtctcattactacccaagggtccatctctaatcaaattatgcgacactgatcgcaatatcctcacttgcactcag 15877648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 15060468 - 15060590
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatc 229  Q
    |||||| ||||||| |||||||||||||| | ||| | ||||||||| |||||| ||||||| ||||||||| | |||||||| | |||||||||| |||    
T  15060468 ttaacagttcataatagcttcacagattgcagttaccatcttatataggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatc 15060567  T
Q  230 gcaatatcctgacttgcactcag 252  Q
    |||| ||||| ||||||| ||||    
T  15060568 gcaacatcctaacttgcaatcag 15060590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 11851644 - 11851868
Alignment:
Q  18 agatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctc 116  Q
    ||||||||||||||  || ||||||||||||||||| |||||||||||||||||  |||||||||||||| | ||||||||||  ||| | ||| ||| |    
T  11851644 agatcacaacaacattataacttcataatatcaatt-catttcaacaacatcttgttcattcaataatatttcaagtaatgcaattaatcattaaatcac 11851742  T
Q  117 atcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatta 216  Q
    |||||| ||| | |||||| |||||| |||||||||| |||  |  |||| ||||| ||| ||||||||       ||||||||||  |||||||| |||    
T  11851743 atcataatcagc-ttaacagttcatagcagcttcacaaatttcagataacatcttaaataggtcacatt------taagggtccaatcctaatcaattta 11851835  T
Q  217 tgcgacacatatcgcaatatcctgacttgcact 249  Q
    | ||| ||| ||||||| ||||| |||||||||    
T  11851836 tacgaaacagatcgcaacatcctaacttgcact 11851868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 208
Target Start/End: Original strand, 14179572 - 14179690
Alignment:
Q  91 aagtaatgcacataacgttatatctcatcatattcaacattaacatttcataa-cagcttcacagattgtaattaacttcttatataagtcacattacta 189  Q
    |||||||||| | ||| ||||||| ||||||| ||||||  ||||  || ||| |||||||||||||| |||||||||||||||||| |||||| |||||    
T  14179572 aagtaatgcataaaacattatatcacatcataatcaacaacaacacatcttaaacagcttcacagattataattaacttcttatataggtcacaatacta 14179671  T
Q  190 cccaagggtccaactctaa 208  Q
    |||| ||||||| ||||||    
T  14179672 cccaggggtccatctctaa 14179690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 166
Target Start/End: Complemental strand, 14576880 - 14576738
Alignment:
Q  25 aacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatatt 124  Q
    |||||||||||||| | |||||||||||| ||  |||||||||||||||  ||||||| |||  | |||||||||| ||||| ||||||| ||||||| |    
T  14576880 aacaacagcatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgcatataacattatatcacatcataat 14576781  T
Q  125 caacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    |||||| ||||  || | |||| ||||||||||| ||||||||    
T  14576780 caacatcaacacatcttaaacaacttcacagattataattaac 14576738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 856298 - 856434
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    |||||||||| |||  ||||| |||||  |||||||||||||| | ||||||||||||||| ||| |||||||||| ||||||||| | |||||||| |     
T  856298 catcatattcgacacaaacatctcatataagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattc 856397  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    | || ||||| ||| ||| || || ||||||||||||    
T  856398 aagcaacacagatcacaacattctcacttgcactcag 856434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 43841004 - 43841148
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | |||||||||||| ||  |||||| ||||||||  ||||||| |||  | |||||||||||||||| ||||||| || ||||    
T  43841004 acaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacataacattatatcacaacata 43841103  T
Q  123 ttcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
     ||||||| ||||  || | |||||||||||||||| ||||||||    
T  43841104 atcaacatcaacacatcttaaacagcttcacagattataattaac 43841148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 46822323 - 46822419
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa 105  Q
    ||||||||||||| ||| ||||| || ||| | | |||||||||| || ||||||||||||||||  |||||||||||||| |||||||||||||||    
T  46822323 agcataggcagattacatcaacaacaagacataaaaatatcaattgcaattcaacaacatcttaaatattcaataatatctcaagtaatgcacataa 46822419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 14668619 - 14668701
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||| |||||| || |||| |||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  14668619 cagatcacatcaacagtataactttataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 14668701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 13442346 - 13442490
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat 121  Q
    |||| |||| |||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| |||||||||||||||| ||||||| ||||||    
T  13442346 acaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcacataacattatatcacatcat 13442444  T
Q  122 attcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    | ||||||| ||||  || | |||||||||||||||| ||||||||    
T  13442445 aatcaacatcaacacatcttaaacagcttcacagattataattaac 13442490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 12511115 - 12511211
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa 105  Q
    ||||||||||||| ||| ||||| || ||| | | |||||||||| || |||||||||||||| |  |||||||||||||| |||||||||||||||    
T  12511115 agcataggcagattacatcaacaacaagacataaaaatatcaattgcaattcaacaacatcttcaatattcaataatatctcaagtaatgcacataa 12511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 23083410 - 23083266
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||| ||||| | |||||||||||| ||  |||||||||||||||  |||||||  ||  |  ||||||||||||||| ||||||| |||||||    
T  23083410 acaaaaacagaatgacataataatatcaattgcaagtcaacaacatcttaaatattcaattttacttctagtaatgcacataacattatatcacatcata 23083311  T
Q  123 ttcaacattaacatttcataa-cagcttcacagattgtaattaac 166  Q
     |||| || ||||  || ||| |||||||||||||||||||||||    
T  23083310 atcaatatcaacacatcttaaacagcttcacagattgtaattaac 23083266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 26686959 - 26687103
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | |||||||||||| ||  |||||| ||||||||  |||| || |||  | |||||||||||||||| ||||||| || ||||    
T  26686959 acaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattccattatacttcaagtaatgcacataacattatatcacaacata 26687058  T
Q  123 ttcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
     ||||||| ||||  || | |||||||||||||||| ||||||||    
T  26687059 atcaacatcaacacatcttaaacagcttcacagattataattaac 26687103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 12038007 - 12037925
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||||  || | ||||||| | ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  12038007 cagatcacaacaacattataatttcataacaacaatt-catttcaacaacatcttgatcattcaataatatctcaagtaatgca 12037925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 14665463 - 14665545
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||| |||||| || |||| | |||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  14665463 cagatcacatcaacagtataactttaaaatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 14665545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 16909926 - 16910008
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaa 212  Q
    |||||| ||||||| |||||||||||||| | ||||| |||| |||| |||||||||||||| ||||||||| | ||||||||    
T  16909926 ttaacaattcataaaagcttcacagattgcagttaacatcttgtataggtcacattactacctaagggtccatccctaatcaa 16910008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 165
Target Start/End: Complemental strand, 24153253 - 24153115
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  |||||||||||||||  ||||||| |||  | || ||||||||||||| | ||||| ||||||| ||||    
T  24153253 aacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaaataatgcacataacataatatcacatcataatcaa 24153154  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaa 165  Q
    ||| ||||  || | |||||||||||||||| |||||||    
T  24153153 catcaacacatcttaaacagcttcacagattataattaa 24153115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 17487928 - 17488072
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat 121  Q
    |||| ||||||||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| |||||||||| ||||| ||||||| ||||||    
T  17487928 acaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcatataacattatatcacatcat 17488026  T
Q  122 attcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    | ||||||| ||||  || | ||||| |||||||||| ||||||||    
T  17488027 aatcaacatcaacacatcttaaacagattcacagattataattaac 17488072  T

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Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 18438606 - 18438750
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||  | |||||||||| | ||  |||||||||||||  | || || | |||||| |||||||||| ||||| ||||||| |||||||    
T  18438606 acaaaaacagcatgatataataatatcaaatgcaagtcaacaacatcttttttatacattcatatctcaagtaatgcatataacattatatcacatcata 18438705  T
Q  123 ttcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    |||||||| ||||  || | |||||||||||||||| || |||||    
T  18438706 ttcaacatcaacacatcttaaacagcttcacagattatagttaac 18438750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 16369584 - 16369706
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatc 229  Q
    |||||| ||||||||||||||||| |||| | ||||| |||||||||  ||||||||||||| ||||||  | | |||||||| | | || |||||||||    
T  16369584 ttaacagttcataacagcttcacatattggagttaacatcttatatagatcacattactacctaagggtgtatccctaatcaattcaagcaacacatatc 16369683  T
Q  230 gcaatatcctgacttgcactcag 252  Q
     | | || || ||||||||||||    
T  16369684 acgacattctcacttgcactcag 16369706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 247
Target Start/End: Complemental strand, 23053019 - 23052902
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatc 229  Q
    |||| ||||||||| ||||||||| | || | | ||| || || |||  ||||||||||||||| ||||||| |||||||||| ||||||||||||  ||    
T  23053019 ttaaaatttcataatagcttcacaaactgcattaaacatcctaaatagatcacattactacccaggggtccatctctaatcaagttatgcgacacaggtc 23052920  T
Q  230 gcaatatcctgacttgca 247  Q
    | || ||||| |||||||    
T  23052919 gtaacatcctcacttgca 23052902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 15878011 - 15877947
Alignment:
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttctta 172  Q
    ||||||| |||||||||||||| |||||| |||||||| | |||||||||| | |||||||||||    
T  15878011 ttatatcacatcatattcaacactaacatctcataacaacatcacagattgcagttaacttctta 15877947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 17499410 - 17499522
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat 121  Q
    |||| ||||||||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| |||||||||| ||||| ||||||| |||||     
T  17499410 acaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcatataacattatatcacatcaa 17499508  T
Q  122 attcaacattaaca 135  Q
    | ||||||| ||||    
T  17499509 aatcaacatcaaca 17499522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 25476434 - 25476290
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | |||||||||| | ||  |||||||||||| ||  || || | |||  | ||||||||| |||||| ||||||| ||||||     
T  25476434 acaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaagtatacattcataattcaagtaatgcgcataacattatatcacatcatt 25476335  T
Q  123 ttcaacattaacatttcataa-cagcttcacagattgtaattaac 166  Q
     ||| ||| ||||  || ||| |||||||||||||||||||||||    
T  25476334 atcatcatcaacacatcttaaacagcttcacagattgtaattaac 25476290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 4589129 - 4589082
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  4589129 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 4589082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 5223149 - 5223196
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  5223149 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 5223196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 11300786 - 11300739
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  11300786 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 11300739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 12339551 - 12339598
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  12339551 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 12339598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 15464950 - 15464997
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  15464950 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 15464997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 8489492 - 8489458
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatat 87  Q
    ||||||||||||||||||| |||||||||||||||    
T  8489492 ttcatttcaacaacatcttgatcattcaataatat 8489458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 11854502 - 11854536
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatat 87  Q
    ||||||||||||||||||||||| |||||||||||    
T  11854502 ttcatttcaacaacatcttaatctttcaataatat 11854536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 30029898 - 30030015
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgt 108  Q
    ||||||| ||||| |||||||||||||||| | | ||||||| || || ||| ||||| ||||||  ||||||||| |  | |||||||| ||| ||| |    
T  30029898 agcatagacagattacaacaacagcatgacataagaatatcatttgcaattc-acaacgtcttaaatattcaataaaacttcaagtaatgtacacaacat 30029996  T
Q  109 tatatctcatcatattcaa 127  Q
    |||||| ||||||| ||||    
T  30029997 tatatcacatcataatcaa 30030015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 205
Target Start/End: Original strand, 42386482 - 42386666
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | | |||||||| | ||  |||||||||||| ||  ||||| | |||  | ||| |||||| ||||| ||||||| |||||||    
T  42386482 acaaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaaatattcattcataattcaagcaatgcatataacattatatcacatcata 42386581  T
Q  123 ttcaacattaa--catttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactc 205  Q
     ||||||| ||  ||| | | |||||||||||||||| | |||||| || || | ||||| || |||||||| | ||| ||||||    
T  42386582 atcaacatcaaaacatcttaaaacagcttcacagattatcattaacatcataaacaagtcccaatactaccccaaggttcaactc 42386666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 12399288 - 12399387
Alignment:
Q  30 cagcatgacttcataatatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatctcatcatattcaac 128  Q
    ||||||||| | |||||||||| | || ||||||||||||||||  |||| |||||| ||| |||||||||| |  || ||||||| ||||||| |||||    
T  12399288 cagcatgacataataatatcaaatgcaattcaacaacatcttaaatattcaaataat-tctcaagtaatgcataagacattatatcacatcataatcaac 12399386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 106 - 252
Target Start/End: Complemental strand, 18419 - 18273
Alignment:
Q  106 cgttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactc 205  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| ||||||| |||    
T  18419 cgttaaatcacatcatattcaacattaacatttcataacagcttcacagattgtagttaacttcttaaataggtcacattactacccaggggtccatctc 18320  T
Q  206 taatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||    
T  18319 taatcaaattatgcgacacaaatcgcaatatcctcacttgcactcag 18273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 63 - 252
Target Start/End: Original strand, 69905 - 70095
Alignment:
Q  63 caacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaa 161  Q
    |||||||| ||||||||| | |||  | ||||||||||  ||| | ||||||| |||||||||||||| |||||| ||||||||||||||||||||| |     
T  69905 caacatctcaatcattcattcataattcaagtaatgcaattaatcattatatcacatcatattcaacactaacatctcataacagcttcacagattgcag 70004  T
Q  162 ttaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  70005 ttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcag 70095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 4e-53; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 60 - 252
Target Start/End: Complemental strand, 25642196 - 25642003
Alignment:
Q  60 caacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaacatttcataacagcttcacagattg 158  Q
    ||||||||||||||||||||| | |||  | ||||||||||  ||| | ||||||| ||||||||||||||||||||| |||||||| ||||| ||||||    
T  25642196 caacaacatcttaatcattcattcataattcaagtaatgcaattaatcattatatcacatcatattcaacattaacatctcataacaacttcaaagattg 25642097  T
Q  159 taattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
     | ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  25642096 cagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattatgcgacacagttcgcaatatcctcacttgcactcag 25642003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 63 - 252
Target Start/End: Original strand, 19863089 - 19863279
Alignment:
Q  63 caacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaa 161  Q
    |||||||| ||||||||| | |||| | ||||||||||  ||| | ||||||| ||||| |||||||| |||||| ||||||||||||||||||||| |     
T  19863089 caacatctcaatcattcattcatatttcaagtaatgcaattaatcattatatcacatcacattcaacactaacatctcataacagcttcacagattgcag 19863188  T
Q  162 ttaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||||||| ||| |||||| ||||||||||||| ||||||||||||    
T  19863189 ttaacttcttatataggtctcattactacccaagggtccatctctaatcaaatgatgtgacacagatcgcaatatccttacttgcactcag 19863279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 63 - 252
Target Start/End: Original strand, 19873231 - 19873421
Alignment:
Q  63 caacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaa 161  Q
    |||||||| ||||||||| | |||| | ||||||||||  ||| | ||||||| ||||| |||||||| |||||| ||||||||||||||||||||| |     
T  19873231 caacatctcaatcattcattcatatttcaagtaatgcaattaatcattatatcacatcacattcaacactaacatctcataacagcttcacagattgcag 19873330  T
Q  162 ttaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||| ||||||||||||    
T  19873331 ttaacttcttatataggtctcattactacccaagggtccatctctaataaaatgatgcgacacagatcgcaatatccttacttgcactcag 19873421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 18907173 - 18907405
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||  ||| | ||| |||     
T  18907173 cagatcacaacaacagcataacttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatca 18907271  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||| ||| | ||| |||||| ||||||||||||||||| |||| | ||||| ||||| ||| |||||||||||||| ||||||||| | |||||||| |     
T  18907272 cattataatgaac-ttaacagttcataacagcttcacatattgcagttaacatcttaaataggtcacattactacctaagggtccatccctaatcaattc 18907370  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactc 250  Q
    |||||||||| ||||||| || || | ||||||||    
T  18907371 atgcgacacagatcgcaacattctcatttgcactc 18907405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 108 - 252
Target Start/End: Original strand, 22438957 - 22439101
Alignment:
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||||||| ||||||| |||||| |||||| ||||||||||||||||||||| | |||||||||||||||  || |||||||||||||||||||| ||| |    
T  22438957 ttatatcacatcataatcaacactaacatctcataacagcttcacagattgcagttaacttcttatatagatctcattactacccaagggtccatctcaa 22439056  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||| |||||||||||||| |||||||||| || ||||||||||||    
T  22439057 atcgaattatgcgacacagatcgcaatattctcacttgcactcag 22439101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 109 - 252
Target Start/End: Original strand, 22432408 - 22432551
Alignment:
Q  109 tatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaa 208  Q
    |||||| ||||||| |||||| | |||| ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||| ||| ||    
T  22432408 tatatcacatcataatcaacactgacatctcataacagcttcacagattgtagttaacttcttatataggtctcattactacccaagggtccatctcaaa 22432507  T
Q  209 tcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||| ||| |||||| |||||||||| || ||||||||||||    
T  22432508 tcaaataatgagacacagatcgcaatatactaacttgcactcag 22432551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 138 - 252
Target Start/End: Complemental strand, 22334825 - 22334711
Alignment:
Q  138 tcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatc 237  Q
    |||||||||||| |||||||| | ||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  22334825 tcataacagctttacagattgcagttaacttcttatataggtctcattgctacccaggggtccaactctaatcaaattatgcgacacagatcgcaatatc 22334726  T
Q  238 ctgacttgcactcag 252  Q
    || ||||||| ||||    
T  22334725 ctcacttgcattcag 22334711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 15894371 - 15894276
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacaca 225  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  15894371 ttaacatttcataacagcttcacagattgtagttaacatcctatataggtcacattactacccaagggtccatctctaaacaagttatgcgacaca 15894276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 252
Target Start/End: Complemental strand, 21834948 - 21834710
Alignment:
Q  11 cataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgtt 109  Q
    |||||| |||||||||||||| ||| | ||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||| ||  ||| | ||    
T  21834948 cataggtagatcacaacaacaacataatttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatacatttaatcatt 21834850  T
Q  110 atatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaat 209  Q
    | ||| ||| ||| ||||| ||| || ||   ||||||||||||||||  | ||||| ||||| ||| |||| ||||||||  ||||||||| | |||||    
T  21834849 aaatcacattataatcaac-ttagcagtt--aaacagcttcacagatttcagttaacatcttaaataggtcagattactactgaagggtccatccctaat 21834753  T
Q  210 caaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||| |||||||| ||| ||||||| ||||| ||||||| ||||    
T  21834752 caatttatgcgaaacagatcgcaacatcctaacttgcattcag 21834710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 100
Target Start/End: Original strand, 21766751 - 21766839
Alignment:
Q  11 cataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||||| ||| | ||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  21766751 cataggcagatcacaacaacaacataatttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 21766839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 15041613 - 15041518
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacata 104  Q
    |||||||||||||||||||||||||||||| | |||||||||| | || ||||| ||||||||||  ||||||||| |||| ||||||||||||||    
T  15041613 agcataggcagatcacaacaacagcatgacattataatatcaaatgcaattcaataacatcttaagtattcaataaaatctcaagtaatgcacata 15041518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 21739964 - 21739861
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatc 229  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||| |||||||||||||| ||| ||||| | |||| ||| | ||| |||||| |||    
T  21739964 ttaacatttcataacagcttcacagattgcaattaacatcctatataggtcacattactacctaagagtccatccctaaacaactcatgtgacacagatc 21739865  T
Q  230 gcaa 233  Q
    ||||    
T  21739864 gcaa 21739861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 18180556 - 18180637
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||||  || ||||||||| | ||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  18180556 cagatcacaacaacattat-acttcataacaacaatt-catttcaacaacatcttaatcattcaataatatttcaagtaatgca 18180637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 22074268 - 22074184
Alignment:
Q  16 gcagatcacaacaacagcatgacttcataat-atcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||| |||||| || || |||||||||||||| ||||||||||    
T  22074268 gcagatcacaacaacagcataacttcatgattatcaatt-catttcagcaacattttgattattcaataatatctcaagtaatgca 22074184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 16523331 - 16523223
Alignment:
Q  144 cagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgact 243  Q
    |||||||||||||   | ||||| ||||| ||| |||||||||||||| |||| |||||| |||||||| |||||||| ||| ||||||| || || |||    
T  16523331 cagcttcacagatctcagttaacatcttaaataggtcacattactacctaaggatccaaccctaatcaatttatgcgaaacagatcgcaacatactaact 16523232  T
Q  244 tgcactcag 252  Q
    |||| ||||    
T  16523231 tgcattcag 16523223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 19303585 - 19303446
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    |||| |||||| | |||||||||| | ||  |||||||||||| ||| || || | |||| | |||||||| ||||||| ||||||| ||||||| ||||    
T  19303585 aacaacatgacataataatatcaaatgcaagtcaacaacatctcaattatacattcatatttcaagtaatgtacataacattatatcacatcataatcaa 19303486  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    ||| ||||  || | |||||||||||||||| ||||||||    
T  19303485 catcaacacatcttcaacagcttcacagattataattaac 19303446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 29060680 - 29060755
Alignment:
Q  91 aagtaatgcacataacgttatatctcatcatattcaacattaacatttcat-aacagcttcacagattgtaattaa 165  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||  || | |||||||||||||||| |||||||    
T  29060680 aagtaatgcacataacattatatctcatcataatcaacatcaacacatcttaaacagcttcacagattataattaa 29060755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 23992485 - 23992578
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa 105  Q
    ||||||||||||| ||| |||||||| ||| | | |||||||||| || ||||||   |||||||  |||||||||||||| |||||||||||||||    
T  23992485 agcataggcagattacatcaacagcaagacataaaaatatcaattgcaattcaac---atcttaaatattcaataatatctcaagtaatgcacataa 23992578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 20361009 - 20360865
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat 121  Q
    |||| ||||||||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| |||||||||| ||||| ||||||| ||||||    
T  20361009 acaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcatataacattatatcacatcat 20360911  T
Q  122 attcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    | ||||||  ||||  || | |||||||||||| ||| ||||||||    
T  20360910 aatcaacaacaacacatcttaaacagcttcacatattataattaac 20360865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 20908036 - 20907954
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||| ||| | ||||||| | ||||| ||||||||||||||||| ||||||||| ||||  | ||||||||||    
T  20908036 cagatcacaacaacatcataatttcataacaacaatt-catttcaacaacatcttgatcattcaagaataattcaagtaatgca 20907954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 164
Target Start/End: Original strand, 20593850 - 20593987
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  |||||||||||| ||| || |||| |||  | |||||||||  |||||  |||||| ||||||| ||||    
T  20593850 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacaatcataaatcaagtaatgcgtataacaatatatcacatcataatcaa 20593949  T
Q  128 cattaacatttcat-aacagcttcacagattgtaatta 164  Q
    ||| ||||  || | |||||||||||||||| ||||||    
T  20593950 catcaacacatcttaaacagcttcacagattataatta 20593987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 20638332 - 20638188
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat 121  Q
    |||| |||| |||||| | |||||||||||| || || | ||||||||| |  ||||||  || |||| |||||||||| | ||||||||||| ||||||    
T  20638332 acaaaaacaacatgacataataatatcaattgcaatttatcaacatctttaatattcaaacat-tcttcaagtaatgcataaaacgttatatcacatcat 20638234  T
Q  122 attcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    | ||||||| ||||  || | |||||||||||||||| ||||||||    
T  20638233 aatcaacatcaacacatcttaaacagcttcacagattataattaac 20638188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 22780276 - 22780132
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| |||||| |||| | |||||||||||| ||  |||||| ||||||||  ||||||| |||  | |||||||||||  ||| ||||||| || ||||    
T  22780276 acaaaaacagcttgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacgcaacattatatcacaacata 22780177  T
Q  123 ttcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
     ||||||| ||||  || | |||||||||||||||| | ||||||    
T  22780176 atcaacatcaacacatcttaaacagcttcacagattatgattaac 22780132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 154
Target Start/End: Complemental strand, 27415985 - 27415861
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatctcatcatattca 126  Q
    ||||||||||| | ||| ||||||||||| |||||||||||||| |  |||| |||||| ||||| |||||||| | ||| ||||||| ||| ||| |||    
T  27415985 aacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataat-tcttaggtaatgcataaaacattatatcacattataatca 27415887  T
Q  127 acattaacatttcataacagcttcacag 154  Q
       ||||||||||| || ||||||||||    
T  27415886 --cttaacatttcacaatagcttcacag 27415861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 16523419 - 16523357
Alignment:
Q  37 acttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||| ||||||||| ||||||| ||||||||| ||||||||||||||| | | ||||||||    
T  16523419 acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaggtaatgca 16523357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 22408358 - 22408276
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||   || ||||||||| | ||||| ||||||||||||||||  ||||||||| ||||| | ||||||||||    
T  22408358 cagatcacaacaactttataacttcataacaacaatt-catttcaacaacatctagatcattcaagaatatttcaagtaatgca 22408276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 23414730 - 23414777
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  23414730 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 23414777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 25629399 - 25629260
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | | |||||||| | ||  |||||||||||| ||| || || | |||  | |||||||||  ||||| ||||||| ||||||| ||||    
T  25629399 aacagcatgacataacaatatcaaatgcaagtcaacaacatctcaattatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 25629300  T
Q  128 cattaacatttcataa-cagcttcacagattgtaattaac 166  Q
    ||| ||||  || ||| |||||||||||||| ||||||||    
T  25629299 catcaacacatcttaaacagcttcacagattataattaac 25629260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 27556488 - 27556535
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  27556488 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 27556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 31478166 - 31478119
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  31478166 ttcattttaacaacatcttgatcattcaataatatttcaagtaatgca 31478119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 17287839 - 17287757
Alignment:
Q  29 acagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttat 111  Q
    |||||||||| | |||||||||||| ||  |||||| ||||||||  ||||||| |||  | |||||||||||||||| ||||    
T  17287839 acagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacataacattat 17287757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 27325662 - 27325581
Alignment:
Q  20 atcacaacaacagcatgacttcataatatcaatttcatttc-aacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||| |||||| || |||||||||||||||||   |||| ||||||| ||| ||||||| ||||||| | ||||||||||    
T  27325662 atcacatcaacagtataacttcataatatcaattcattttcaaacaacaacttgatcattccataatatttcaagtaatgca 27325581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 9703430 - 9703566
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  9703430 catcataatcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtcacattaatacccaagggtccatctctaatcaaatt 9703529  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||  ||||||||||||| ||||||||||||    
T  9703530 atgcgacacggatcgcaatatcctcacttgcactcag 9703566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 12321796 - 12321562
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| ||||||| | ||||||||||  ||| | ||| |||     
T  12321796 cagatcacaacaacagcataacttcataatatcaatt-catttcaacaacatcttgatcattccataatatttcaagtaatgcaattaatcattaaatca 12321698  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||| ||| ||||| |||||| |||||||||| ||||||||||| | ||||| ||||||||| |||||||||||||| ||| ||||| | |||||||| |     
T  12321697 cattataatcaac-ttaacagttcataacagtttcacagattgcagttaacatcttatataggtcacattactacctaagagtccatccctaatcaattc 12321599  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| ||||| | || || | ||||||||||    
T  12321598 atgcgacacagatcgctacattctcatttgcactcag 12321562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 63 - 252
Target Start/End: Complemental strand, 18154846 - 18154656
Alignment:
Q  63 caacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaa 161  Q
    |||||||| ||||||||| | |||  | ||||||||||  ||| | ||||||| ||||||||||||||||||||| |||||||||||||||| |||| |     
T  18154846 caacatctcaatcattcattcataattcaagtaatgcaattaaacattatatcgcatcatattcaacattaacatctcataacagcttcacatattgcag 18154747  T
Q  162 ttaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||||||||||| ||| ||||||||||||| |||||| || ||||||||| |||||||||| |||||| |  ||| ||||||||||||    
T  18154746 ttaacttcttatataggtctcattactacccaatggtccatctttaatcaaatcatgcgacacagatcgcatttccctcacttgcactcag 18154656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 110 - 252
Target Start/End: Original strand, 24054626 - 24054768
Alignment:
Q  110 atatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaat 209  Q
    ||||| ||||||| |||||| |||||| ||||||||||||||||||||| | |||||| |||||||| ||| |||||||||||||||||||| |||||||    
T  24054626 atatcacatcataatcaacactaacatctcataacagcttcacagattgcagttaactccttatataggtctcattactacccaagggtccatctctaat 24054725  T
Q  210 caaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    | |||||||||||||| |||||||||| || |||| |||||||    
T  24054726 cgaattatgcgacacagatcgcaatattctcactttcactcag 24054768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 14429945 - 14430178
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    |||||||||||||||| || ||||||| ||||||||| ||||||| ||||||||| ||||||||||||||| | ||||||||||  ||| | ||| |||     
T  14429945 cagatcacaacaacagtat-acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatca 14430042  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||| ||| ||| | |||||| |||||| |||||||||||||   | ||||| ||||| ||| |||||||||||||| ||||||||||| |||||||| ||    
T  14430043 cattataatcagc-ttaacagttcatagcagcttcacagatctcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaattt 14430141  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||| ||| ||||||| || || ||||||| ||||    
T  14430142 atgcgaaacagatcgcaacatactaacttgcattcag 14430178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 63 - 250
Target Start/End: Complemental strand, 19649494 - 19649306
Alignment:
Q  63 caacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaa 161  Q
    |||||||| ||||||||| | |||  | ||||||||||  ||| | ||||||| |||||||||||||| ||||||  | |||| ||||||||||||| |     
T  19649494 caacatctcaatcattcattcataattcaagtaatgcaattaatcattatatcacatcatattcaacactaacatcacttaactgcttcacagattgcag 19649395  T
Q  162 ttaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactc 250  Q
    ||||||||| || || ||| || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||| |||||    
T  19649394 ttaacttctaatttaggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttacactc 19649306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 11880462 - 11880552
Alignment:
Q  162 ttaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  11880462 ttaacatcttatataggtcacattactacccaagggtccatctcaaatcaaattatgcgacacatatcgcaacatcctcacttgcactcag 11880552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 17138019 - 17137883
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||  ||||| ||||| ||||||||||||||| | ||||||||||||||| ||| |||||||||| ||||||||| | |||||||| |     
T  17138019 catcatattcaacacaaacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaattc 17137920  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    | || ||||| ||| ||| || || ||||||||||||    
T  17137919 aagcaacacagatcacaacattctcacttgcactcag 17137883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 12187177 - 12187313
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    |||||||||||||   ||||| || || ||||||||||||||| | ||||||||||||||| ||| |||||||||| || |||||| |||||||||| |     
T  12187177 catcatattcaactcaaacatctcttatcagcttcacagattgcagttaacttcttatataggtctcattactacctaatggtccatctctaatcaattc 12187276  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    | || ||| ||||| | |||| || ||||||||||||    
T  12187277 aagcaacatatatcactatattctcacttgcactcag 12187313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 2760193 - 2760276
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||||  || |||||||||||||||||   ||||||||||||| | ||||||||||||||||| ||||||||||    
T  2760193 cagatcacaacaacattataacttcataatatcaattcattttcaacaacatcatgatcattcaataatatctcaagtaatgca 2760276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 12698910 - 12699048
Alignment:
Q  29 acagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcatattcaa 127  Q
    |||||||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| |||||||||||||||| ||||||| ||||||| ||||    
T  12698910 acagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcacataacattatatcacatcataatcaa 12699008  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    ||| ||||  || | |||||||||||||||| ||||||||    
T  12699009 catcaacacatcttaaacagcttcacagattataattaac 12699048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 165
Target Start/End: Complemental strand, 18456457 - 18456319
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    |||| |||||| | |||||||||| | ||  |||||||||||||||  ||||||| |||  | |||||||||||||||| ||||||| ||||||| ||||    
T  18456457 aacaacatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcataatcaa 18456358  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaa 165  Q
    ||| ||||  || | |||||||||||||||| |||||||    
T  18456357 catcaacacatcttaaacagcttcacagattataattaa 18456319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 9509261 - 9509405
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat 121  Q
    |||| ||||||||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| ||||||||||||||||  |||||| ||||||    
T  9509261 acaataacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcacataacactatatcacatcat 9509359  T
Q  122 attcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    | ||||||| ||||  || | |||||||||||||||| ||||||||    
T  9509360 aatcaacatcaacacatcttaaacagcttcacagattataattaac 9509405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 3271885 - 3272058
Alignment:
Q  17 cagatcacaacaacagcatgacttcataa-tatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatc 114  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||| |||||||||| || |||||||||||| | ||||||||||  ||| |  || |||    
T  3271885 cagatcacaacaacagcataacttcataattatcaa-ttcatttctacaacatcttgattattcaataatat-tcaagtaatgcaattaatcagtaaatc 3271982  T
Q  115 tcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacc 191  Q
     ||||||| ||| | |||| | ||||||||||||||||| |||  | ||||| ||||||||| ||| || |||||||    
T  3271983 acatcataatcagc-ttaatagttcataacagcttcacatatttcatttaacatcttatataggtctcactactacc 3272058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 2832476 - 2832414
Alignment:
Q  37 acttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||| |||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  2832476 actttataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 2832414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 171
Target Start/End: Original strand, 26212075 - 26212217
Alignment:
Q  30 cagcatgacttcataatatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatctcatcatattcaac 128  Q
    ||||||||| | |||||||||||| || ||||||||||||||||  |||| |||||| ||| |||||||||| | ||| ||||||| ||| ||| |||||    
T  26212075 cagcatgacataataatatcaattgcaattcaacaacatcttaaatattcaaataat-tctcaagtaatgcataaaacattatatcacattataatcaac 26212173  T
Q  129 attaacatttcat-aacagcttcacagattgtaattaacttctt 171  Q
    |  ||||  || | |||||||||||||||| |||||||| ||||    
T  26212174 aacaacacatcttaaacagcttcacagattataattaacctctt 26212217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 100
Target Start/End: Complemental strand, 39267934 - 39267872
Alignment:
Q  37 acttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  39267934 acttcataatatcaatt-catttcaacaacatcttgatcattcaatactatttcaagtaatgca 39267872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 9751788 - 9751728
Alignment:
Q  39 ttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||||| | ||||||||||    
T  9751788 ttcataatatcaatt-cattccaacaacatcttgatcattcaataatatttcaagtaatgca 9751728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 14932797 - 14932685
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttc-atttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacg 107  Q
    |||||||| |||| ||||||| |||||||| | |||||||||||| | ||||||||||||  ||||  ||||||||| |  | |||||||||||| |||     
T  14932797 agcataggtagattacaacaatagcatgacataataatatcaattgcaatttcaacaacactttaaatattcaataaaacttcaagtaatgcacacaaca 14932698  T
Q  108 ttatatctcatca 120  Q
    ||||||| |||||    
T  14932697 ttatatcacatca 14932685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 15356232 - 15356120
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttc-atttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacg 107  Q
    |||||||| |||| ||||||| |||||||| | |||||||||||| | ||||||||||||  ||||  ||||||||| |  | |||||||||||| |||     
T  15356232 agcataggtagattacaacaatagcatgacataataatatcaattgcaatttcaacaacactttaaatattcaataaaacttcaagtaatgcacacaaca 15356133  T
Q  108 ttatatctcatca 120  Q
    ||||||| |||||    
T  15356132 ttatatcacatca 15356120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 15360346 - 15360234
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttc-atttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacg 107  Q
    |||||||| |||| ||||||| |||||||| | |||||||||||| | ||||||||||||  ||||  ||||||||| |  | |||||||||||| |||     
T  15360346 agcataggtagattacaacaatagcatgacataataatatcaattgcaatttcaacaacactttaaatattcaataaaacttcaagtaatgcacacaaca 15360247  T
Q  108 ttatatctcatca 120  Q
    ||||||| |||||    
T  15360246 ttatatcacatca 15360234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 7519378 - 7519331
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  7519378 ttcatttcaacaacatcttgatcattcaataatatttcaagtaatgca 7519331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 13918800 - 13918753
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  13918800 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 13918753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 25927523 - 25927476
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  25927523 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 25927476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 100
Target Start/End: Original strand, 12318204 - 12318261
Alignment:
Q  43 taatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||   |||||||||| |||||||||||||||||||  | ||||||||||    
T  12318204 taatatcaattcattttcaacaacttcttaatcattcaataataattcaagtaatgca 12318261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 38227557 - 38227665
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  |||||||||||||||  ||||||| |||  | || ||||| ||||| | ||||||| |||| || ||||    
T  38227557 aacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaattaatgtacatatcattatatcacatcttaatcaa 38227656  T
Q  128 cattaacat 136  Q
    ||| |||||    
T  38227657 catcaacat 38227665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 40443467 - 40443511
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatctta 72  Q
    ||||||||||| | ||||||||||||||| |||| ||||||||||    
T  40443467 aacagcatgacataataatatcaatttcaattcatcaacatctta 40443511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 116 - 249
Target Start/End: Complemental strand, 15625 - 15492
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  15625 catcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttatataggtctcattactacccaagggtccatctctaatcaaatt 15526  T
Q  216 atgcgacacatatcgcaatatcctgacttgcact 249  Q
    | |||||||| ||| ||||||||| |||||||||    
T  15525 aagcgacacagatcacaatatcctcacttgcact 15492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 8913 - 8777
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||  | ||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||    
T  8913 catcatattcaacatcaacatttcataacagcttcacagattacagttaacttcttatataggtctcattactacccaagggtccatctctaatcgaatt 8814  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||||||  |||||||||||| ||||||||||||    
T  8813 atgcgacacaggtcgcaatatcctcacttgcactcag 8777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 201
Target Start/End: Complemental strand, 18718 - 18527
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cg 107  Q
    |||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||||||||| ||||||||||||||| | |||||||| |  ||| |     
T  18718 agcataggcagatcacaacaacagaataacttcataatatcaa-ttcgtttcaacaacatcttgatcattcaataatatttcaagtaatggaattaatca 18620  T
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtcca 201  Q
    ||| ||| ||| ||| |||||| || ||||||||||||||||||||||||| | ||||||||||||||| ||| |||||||||| |||||||||    
T  18619 ttaaatcacattataatcaaca-taccatttcataacagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtcca 18527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 39989 - 40128
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    |||| |||||| | |||||||||| | ||| |||| ||||||||||  |||  || |||  | |||||||||||||||| ||||||| ||||||| ||||    
T  39989 aacaacatgacataataatatcaaatgcatgtcaataacatcttaaatatttgattatacttcaagtaatgcacataacattatatcacatcataatcaa 40088  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    ||| ||||  |||| || ||||||||||||| ||||||||    
T  40089 catcaacacatcataaagagcttcacagattataattaac 40128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 250
Target Start/End: Original strand, 174839 - 175064
Alignment:
Q  26 acaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatatt 124  Q
    ||||||||||||| | || ||||||| |||| ||||||||||||| ||||||||| | |||  | ||||||||||  ||| | ||||||| | |||||||    
T  174839 acaacagcatgacatgattatatcaaattcaattcaacaacatctcaatcattcattcataattcaagtaatgcaactaaacattatatcacgtcatatt 174938  T
Q  125 caacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacac 224  Q
    ||||| |||||| |||||| |||||||||||||  | ||||||||||||||| ||| |||||||||| ||||||||| |||||||||||| |||||||||    
T  174939 caacactaacatctcataatagcttcacagatttcagttaacttcttatataggtctcattactaccaaagggtccatctctaatcaaatcatgcgacac 175038  T
Q  225 atatcgcaatatcctgacttgcactc 250  Q
    | |||||| | |||| ||||| ||||    
T  175039 agatcgcattttcctcacttggactc 175064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 124725 - 124801
Alignment:
Q  91 aagtaatgcacataacgttatatctcatcatattcaacattaacatttcataa-cagcttcacagattgtaattaac 166  Q
    |||||||||| ||||| ||||||| ||||||| ||||||| ||||  || ||| |||||||||||||| ||||||||    
T  124725 aagtaatgcatataacattatatcacatcataatcaacatcaacacatcttaaacagcttcacagattataattaac 124801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 108 - 252
Target Start/End: Original strand, 1495 - 1639
Alignment:
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||||||| |||||||||||||| |||||| | |||||||||||  |||||| | ||||||||||||||| ||| || ||||||||||||||||| |||||    
T  1495 ttatatcacatcatattcaacactaacatctaataacagcttcgtagattgcatttaacttcttatataggtctcaatactacccaagggtccatctcta 1594  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  1595 atcaaattatgcgacacagatcgcaatatcctcacttgcactcag 1639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 65757 - 65613
Alignment:
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||||||| |||||||||||||| |||||| |||||||||  |||||| ||| | ||||||||||||||| ||| |||||||||||||||||||| |||||    
T  65757 ttatatcacatcatattcaacactaacatctcataacaggatcacaggttgcagttaacttcttatataggtctcattactacccaagggtccatctcta 65658  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||||||||| | ||||||||||||| ||||||||||||    
T  65657 atcaaattatgcgacaaagatcgcaatatcctcacttgcactcag 65613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 128827 - 128913
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatc 114  Q
    ||||||||||| | |||||||||| | ||  |||||||||||||||  ||||||| |||  | |||||||| ||||||| |||||||    
T  128827 aacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgtacataacattatatc 128913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 221 - 456
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    ||||||||| ||||| ||| |||||||||||||||||   ||||||||||||||| ||||||||||||||| | ||||||||||  ||  | ||| |||     
T  221 cagatcacatcaacaacataacttcataatatcaattcattttcaacaacatcttgatcattcaataatatttcaagtaatgcaattagtcattaaatca 320  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||| ||| ||||| |||||| |||||||||||||||||||||    ||||| |||||  || |||||||||||||| ||||||||| | |||||||| ||    
T  321 cattataatcaac-ttaacagttcataacagcttcacagatttccgttaacatcttaattaggtcacattactacctaagggtccatccctaatcaattt 419  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| |||  |||||||| ||||||||||||    
T  420 atgcgacacagatccaaatatcctaacttgcactcag 456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 3913 - 4040
Alignment:
Q  124 tcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgaca 223  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |    
T  3913 tcaacattaacatttcataacagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaa-tatgcgata 4011  T
Q  224 catatcgcaatatcctgacttgcactcag 252  Q
    || ||||||| ||||| ||||||||||||    
T  4012 cagatcgcaacatcctcacttgcactcag 4040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 8344 - 8471
Alignment:
Q  124 tcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgaca 223  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |    
T  8344 tcaacattaacatttcataacagcttcacagattgcaattaatatcttatataggtcacattactacccaagggtccatctctaatcaaa-tatgcgata 8442  T
Q  224 catatcgcaatatcctgacttgcactcag 252  Q
    || ||||||| ||||| ||||||||||||    
T  8443 cagatcgcaacatcctcacttgcactcag 8471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 63 - 252
Target Start/End: Original strand, 32544 - 32733
Alignment:
Q  63 caacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaa 161  Q
    |||||||| ||||||||| | ||| || ||||||||||  ||| | ||| ||| ||| ||| ||||||||||||||||||||||||||||||||||| ||    
T  32544 caacatctcaatcattcattcataactcaagtaatgcaattaatcattaaatcacattataatcaacattaacatttcataacagcttcacagattgcaa 32643  T
Q  162 ttaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||| | ||| | | ||||| |||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  32644 ttaacattttaaa-aggtcactttactacccaggggtccaactctaaacaaattatgcgacacagatcgcgatatcctcacttgcactcag 32733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 116 - 248
Target Start/End: Original strand, 6266 - 6398
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||  | |||||||||| || |||| |||||||||||||    
T  6266 catcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttgtataggtttctttactacccagggatccatctctaatcaaatt 6365  T
Q  216 atgcgacacatatcgcaatatcctgacttgcac 248  Q
    |||||||||| ||||||| ||||| ||||||||    
T  6366 atgcgacacagatcgcaacatcctcacttgcac 6398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 745 - 881
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    |||||||||||||||||||||  | |||||||||||||||||| | ||||||||||| ||| ||| |||||||||| ||||||||| |||||||||||||    
T  745 catcatattcaacattaacatcacgtaacagcttcacagattgcagttaacttcttaaataggtctcattactaccgaagggtccatctctaatcaaatt 844  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| ||||||||||||| | || |||||||    
T  845 atgcgacacagatcgcaatatcctcatttacactcag 881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 951 - 1192
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cg 107  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||  ||| ||    
T  951 agcataggcagatcacaacaacagcataatttcataatatcaa-ttcatttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcg 1049  T
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||| ||| ||| | |  |||| ||| ||  ||| |||||| |||||||||  | ||||| ||||| ||| |||||||||||||  ||||||||||| |||    
T  1050 ttaaatcacattacaaacaac-ttagcaggtca-aacagcctcacagatttcagttaacatcttaaataggtcacattactacttaagggtccaacccta 1147  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||| || ||||||||| ||||||| ||||| | ||||| ||||    
T  1148 atcaatttgtgcgacacagatcgcaacatcctaatttgcattcag 1192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 108 - 252
Target Start/End: Original strand, 20138 - 20282
Alignment:
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||||| ||| | ||||||||||||||| ||| |||||||||||||||||||| | |||    
T  20138 ttatatcacatcatattcaacactaacatctcataacagcttcacaggttgcagttaacttcttatataggtctcattactacccaagggtccatcccta 20237  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||| |||||||||| ||  || |||||| ||||||||||||    
T  20238 atcaaatcatgcgacacagattacattatcctcacttgcactcag 20282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 14835 - 14971
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||  |||||||||||| | ||||| |||||||||||||    
T  14835 catcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggagtccatctctaatcaaatt 14934  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| || ||| |||||| ||| ||||||||    
T  14935 atgcgacacagattgcagtatcctcactggcactcag 14971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 23850 - 23986
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||  |||||||||||| | ||||| |||| ||||||||    
T  23850 catcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaatt 23949  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| || ||| |||||| ||| ||||||||    
T  23950 atgcgacacagattgcagtatcctcactggcactcag 23986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 39274 - 39410
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||  |||||||||||| | ||||| |||| ||||||||    
T  39274 catcatattcaacattaacatttcataacagcttcacagattgcagttaacttcttgtataggtttcattactacccaggtgtccatctcttatcaaatt 39373  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||||| || ||| |||||| ||| ||||||||    
T  39374 atgcgacacagattgcagtatcctcactggcactcag 39410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 21623 - 21389
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    |||||||||||||||  || ||||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||| ||  ||| | ||| |||     
T  21623 cagatcacaacaacattataacttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatacaattaatcattaaatca 21525  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||| ||| ||| | |||||| |||||| |||||||||| |||  | ||||| ||||| ||| |||||||||||||| ||||||||| | |||||||| ||    
T  21524 cattataatcagc-ttaacagttcatagcagcttcacaaatttcagttaacatcttaaataggtcacattactacctaagggtccatccctaatcaattt 21426  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||| ||| ||||||| ||||| ||||||| ||||    
T  21425 atgcgaaacagatcgcaacatcctaacttgcattcag 21389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 80710 - 80676
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatat 87  Q
    ||||||||||||||||||| |||||||||||||||    
T  80710 ttcatttcaacaacatcttgatcattcaataatat 80676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 250
Target Start/End: Complemental strand, 4889 - 4755
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||| |||| | | ||||||||| ||||| |||| ||||||||    
T  4889 catcatattcaacattaacatttcataacagcttcacagattgcagtaaacttcttatataggtcataatgctacccaagagtccacctctgatcaaatt 4790  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactc 250  Q
    |||||||||| |||||||| |||| | ||||||||    
T  4789 atgcgacacaaatcgcaatgtcctcaattgcactc 4755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 63 - 252
Target Start/End: Original strand, 36567 - 36757
Alignment:
Q  63 caacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaa 161  Q
    |||||||| ||||||||| | |||  | ||||||||||  ||| | ||||||| |||||||||||||| |||||| ||||||||||||||||||||| |     
T  36567 caacatctcaatcattcattcatagttcaagtaatgcaattaaacattatatcacatcatattcaacactaacatctcataacagcttcacagattgcag 36666  T
Q  162 ttaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||||||||| ||| ||| |||||||||||||||||||  |||||| ||||| |||||||||| |||| | | |||| ||||||||||||    
T  36667 ttaacttcttaaataggtctcattactacccaagggtccttctctaaacaaatcatgcgacacagatcgtattttcctcacttgcactcag 36757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 118 - 252
Target Start/End: Complemental strand, 48414 - 48280
Alignment:
Q  118 tcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattat 217  Q
    ||||||||||| |||||||  || |||||||||||| |||| | ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  48414 tcatattcaactttaacatcacacaacagcttcacatattgcatttaacttcttatataggtctcattactacccaagggtccatctctaatcaaattat 48315  T
Q  218 gcgacacatatcgcaatatcctgacttgcactcag 252  Q
    | |||||| |||||||||| || ||||||||||||    
T  48314 gtgacacagatcgcaatattcttacttgcactcag 48280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 9 - 252
Target Start/End: Complemental strand, 6477 - 6236
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cg 107  Q
    |||||||| |||||||||||| ||||| | ||||||||||||||| ||||||||||||||||| ||||||||||||||| |  |||||||||  ||| |     
T  6477 agcataggaagatcacaacaatagcataatttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcgagtaatgcatttaatca 6379  T
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||| ||| ||| | |  |||  ||| || |||| |||||||||||| |||  | ||||| ||||| ||| |||||||||||||| ||||||||||| |||    
T  6378 ttaaatcacattacaaacaag-ttagcagttca-aacagcttcacatatttcagttaacatcttaaataggtcacattactacctaagggtccaacccta 6281  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||| |||||||| ||| ||||||||||||| ||||||| ||||    
T  6280 atcaacttatgcgaaacaaatcgcaatatcctaacttgcattcag 6236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 26986 - 27122
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||||||| ||||||  ||||| ||||||||||||||||||||| | ||||||||||||||| ||| |||||||||||||||||||| |||||| |||| |    
T  26986 catcataatcaacacaaacatctcataacagcttcacagattgcagttaacttcttatatatgtctcattactacccaagggtccatctctaaacaaaat 27085  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    || ||| ||| ||||||||||||| ||||||||||||    
T  27086 attcgaaacagatcgcaatatcctcacttgcactcag 27122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 6363 - 6134
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||||| |||| ||||||||||||||| | ||||||||||  |||   ||| |||     
T  6363 cagatcacaacaacatcataacttcataatatcaatt-catttcaacaacttcttgatcattcaataatatttcaagtaatgcaattaataattaaatca 6265  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||  |||  |||| |||||||||||||| |||||||||||||| | ||||| || || |||  ||||||||||||  | ||||||| |||||||||| ||    
T  6264 caatataaacaac-ttaacatttcataatagcttcacagattgcatttaacatcctaaatagatcacattactacttaggggtccatctctaatcaagtt 6166  T
Q  216 atgcgacacatatcgcaatatcctgacttgca 247  Q
    ||||||||||  |||||| ||||| |||||||    
T  6165 atgcgacacaagtcgcaacatcctcacttgca 6134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 238
Target Start/End: Original strand, 1884 - 2111
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cg 107  Q
    ||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||  ||| |     
T  1884 agcataggcagatcacaacaacagcataatttcataatatcaa-ttcatttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatca 1982  T
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||| ||| ||| | |  |||| ||| || |||| ||||| ||||||||||    ||||| ||||| ||| ||||||||||| || |||||||||||||||    
T  1983 ttaaatcacattacaaacaac-ttagcagttca-aacagtttcacagatttcggttaacatcttaaataggtcacattactccctaagggtccaactcta 2080  T
Q  208 atcaaattatgcgacacatatcgcaatatcc 238  Q
    ||||| || ||||| ||| ||||||| ||||    
T  2081 atcaatttgtgcgaaacagatcgcaacatcc 2111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 9575 - 9793
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    ||||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||  ||| | ||| |||     
T  9575 cagatcacatcaacagcataact-cataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatca 9672  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||| | |  |||| ||| || |||| ||||| ||||||||||    ||||| ||||| ||| ||||||||||| || |||||||||||||||||||| ||    
T  9673 cattacaaacaac-ttagcagttca-aacagtttcacagatttcggttaacatcttaaataggtcacattactccctaagggtccaactctaatcaattt 9770  T
Q  216 atgcgacacatatcgcaatatcc 238  Q
     ||||| ||| ||||||| ||||    
T  9771 gtgcgaaacagatcgcaacatcc 9793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 455 - 689
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    |||||||||||| |||||| ||||||||||||||| ||| ||||||| ||||||| ||||||||||||||| | ||||||||||  ||| | ||| |||     
T  455 cagatcacaacagcagcataacttcataatatcaa-ttcttttcaacgacatcttgatcattcaataatatttcaagtaatgcatttaatcattaaatca 553  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaatt 215  Q
    ||| ||| ||| | |||||| ||||||  ||||||||||||   ||||||| ||||| ||| ||| |||||||||| ||||||||| | | |||||| ||    
T  554 cattataatcagc-ttaacagttcatagtagcttcacagatctcaattaacatcttaaataggtcgcattactacctaagggtccatcccaaatcaactt 652  T
Q  216 atgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||| ||| ||||||| ||||| ||||||| ||||    
T  653 atgcgaaacagatcgcaacatcctaacttgcattcag 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 252
Target Start/End: Original strand, 44135 - 44376
Alignment:
Q  9 agcataggcagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cg 107  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||| || |||||||||||| ||||||||||||  ||| |     
T  44135 agcataggcagatcacaacaacagcataatttcataatatcaa-ttcatttccacaacatcttgataattcaataatattttaagtaatgcatttaatca 44233  T
Q  108 ttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactcta 207  Q
    ||| ||| ||| | |  |||| ||| || || | || |||||||||||||  | ||||| ||||| ||| |||||||||||||| ||||||||||| |||    
T  44234 ttaaatcacattacaaacaac-ttagcagttta-aaaagcttcacagatttcagttaacatcttaaataggtcacattactacctaagggtccaacccta 44331  T
Q  208 atcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    ||||| |||||||| | | ||||||| || || ||||||| ||||    
T  44332 atcaacttatgcgaaaaagatcgcaacatactaacttgcattcag 44376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 63 - 201
Target Start/End: Original strand, 23954 - 24092
Alignment:
Q  63 caacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaat 162  Q
    |||||||| ||||||||| | |||  | |||||||| |  |||| ||||||| |||||||||||||| |||||| || |||||||||||||||||| | |    
T  23954 caacatctcaatcattcattcatagttcaagtaatgaaattaacattatatcacatcatattcaacactaacatctcttaacagcttcacagattgcagt 24053  T
Q  163 taacttcttatataagtcacattactacccaagggtcca 201  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  24054 taacttcttatataggtctcattactacccaagggtcca 24092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 37 - 252
Target Start/End: Original strand, 1575 - 1789
Alignment:
Q  37 acttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaaca 135  Q
    ||||||| ||||||||| ||||||| ||||||||| ||||||||||||||| | ||||||||||  ||| | ||| ||| ||| ||| ||| | ||||||    
T  1575 acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatcacattataatcagc-ttaaca 1672  T
Q  136 tttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaata 235  Q
     |||||| |||||||||||||   | ||||| ||||| ||| |||||||||||||| ||||||||||| |||||||| |||||| | ||| ||||||| |    
T  1673 gttcatagcagcttcacagatctcagttaacatcttaaataggtcacattactacctaagggtccaaccctaatcaatttatgcaaaacagatcgcaaca 1772  T
Q  236 tcctgacttgcactcag 252  Q
    | || ||||||| ||||    
T  1773 tactaacttgcattcag 1789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 15149 - 15321
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||  ||| | ||| |||     
T  15149 cagatcacaaca-cagcataacttcataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgcaattaatcattaaatca 15246  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacc 191  Q
    ||| ||| ||||| ||||| ||| ||||||||||||||||||| | ||||| ||||||| | ||| || |||||||    
T  15247 cattataatcaac-ttaactttttataacagcttcacagattgcagttaacatcttataaaggtctcactactacc 15321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 7076 - 6898
Alignment:
Q  74 tcattcaataatatcttaagtaatgcacataa-cgttatatctcatcatattcaacattaacatttcataacagcttcacagattgtaattaacttctta 172  Q
    ||||||| ||| |||| ||||||||||  ||| | ||| ||||||| ||| ||| | ||||||||||||||||||||||||||||| | ||||| |||||    
T  7076 tcattcattaacatctcaagtaatgcaattaatcattaaatctcattataatcagc-ttaacatttcataacagcttcacagattgcagttaacatctta 6978  T
Q  173 tataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||| |||||||||||||| ||||| ||| | |||||||| | |||||||||| ||||||| || || | ||||||||||    
T  6977 tataggtcacattactacctaagggcccatccctaatcaactcatgcgacacagatcgcaacattctcaattgcactcag 6898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 3016 - 3138
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatc 229  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||| |||||| ||||||| ||| ||||||| |||||||| |||||||||||| |||    
T  3016 ttaacatttcataacagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacagatc 3115  T
Q  230 gcaatatcctgacttgcactcag 252  Q
     ||| |||||  |||||| ||||    
T  3116 acaacatcctatcttgcattcag 3138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 6682 - 6804
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatc 229  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||| |||||| ||||||| ||| ||||||| |||||||| |||||||||||| |||    
T  6682 ttaacatttcataacagcttcacagattgcaattaacatcctatataggtcacactactacctaagagtccaaccctaatcaatttatgcgacacagatc 6781  T
Q  230 gcaatatcctgacttgcactcag 252  Q
     ||| |||||  |||||| ||||    
T  6782 acaacatcctatcttgcattcag 6804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 34852 - 34730
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatc 229  Q
    |||||| |||||||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||| |||||| ||| ||||| |||| |  ||    
T  34852 ttaacaattcataacagcttcacagattgcagttaacatcttatataggtcacattactacccaagggtccatctctaaacaagttatgtgacaaaggtc 34753  T
Q  230 gcaatatcctgacttgcactcag 252  Q
    ||||| | || ||||||||||||    
T  34752 gcaatgttctcacttgcactcag 34730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 24345 - 24206
Alignment:
Q  29 acagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat-attca 126  Q
    |||||||||| | | |||||||||| || |||| |||||||||||  ||||||  || |||| |||||||||||||||| ||||||| |||||| |||||    
T  24345 acagcatgacataaaaatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcacataacattatatcacatcataattca 24247  T
Q  127 acattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    |||| ||||  || | |||||||||||||||| ||||||||    
T  24246 acatcaacacatcttaaacagcttcacagattataattaac 24206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 19344 - 19173
Alignment:
Q  20 atcacaacaacagcatgacttcataat-atcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatctca 117  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||||||||| || |||||||||||||| ||||||||||  ||| |  || ||| ||    
T  19344 atcacaacaacagcataacttcataattatcaatt-catttcaacaacatcttgattattcaataatatctcaagtaatgcaattaatcaataaatcaca 19246  T
Q  118 tcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacc 191  Q
    ||||| ||| | |||| | |||||||||||||||||||||  | ||||| ||||||||| ||| || |||||||    
T  19245 tcataatcagc-ttaatagttcataacagcttcacagatttcatttaacatcttatataggtctcactactacc 19173  T

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Target: scaffold0676 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 4492 - 4665
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||||||||| ||||||| ||||||| | ||||||||||  ||| |  || |||     
T  4492 cagatcacaacaacagcataatttcataatatcaatt-catttcaacaacatcttgatcattcgataatatttcaagtaatgcaattaatcaataaatca 4590  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacc 191  Q
    ||| ||| ||||| ||| |||||||||| || ||||||| ||  | ||||||||||||||| ||| || |||||||    
T  4591 cattataatcaac-ttagcatttcataatagtttcacagtttacagttaacttcttatataggtctcactactacc 4665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 2139 - 1904
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    ||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||| |||||||||| | || | ||||||||||  ||| | ||| ||      
T  2139 cagatcacaacaacaacataacttcataatatcaa-tccatttcaacaacatcttgatcattcaatgaaatttcaagtaatgcatttaatcattaaatta 2041  T
Q  116 catcatattcaacattaaca-tttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaat 214  Q
    ||| | |  |||| ||| || |||||||||||||||||| |||  | ||||  ||||| ||| |||||||||||||| ||||||||||| |||||| | |    
T  2040 cattacaaacaac-ttagcattttcataacagcttcacatatttcagttaatatcttaaataggtcacattactacctaagggtccaaccctaatcgatt 1942  T
Q  215 tatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
     |||||||||| ||| ||| || || | ||||||||||    
T  1941 catgcgacacagatcacaacattctcatttgcactcag 1904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 33608 - 33692
Alignment:
Q  16 gcagatcacaacaacagcatgacttcataat-atcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| || |||||||||||||| ||||||||||    
T  33608 gcagatcacaacaacagcataacttcataattatcaatt-catttcaacaacatcttgattattcaataatatctcaagtaatgca 33692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 5648 - 5730
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| | |||||||||||||||   ||||||||||||||| ||||||||||||||||| ||||||||||    
T  5648 cagatcacaacaacagcat-agttcataatatcaattcattttcaacaacatcttgatcattcaataatatctcaagtaatgca 5730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 6843 - 6925
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| | |||||||||||||||   ||||||||||||||| ||||||||||||||||| ||||||||||    
T  6843 cagatcacaacaacagcat-agttcataatatcaattcattttcaacaacatcttgatcattcaataatatctcaagtaatgca 6925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 351 - 434
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||||  || ||||||||| | ||||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  351 cagatcacaacaacaatataacttcataacaacaatttcatttcaacaacatcttgatcattcaataatatttaaagtaatgca 434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 3579 - 3434
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | |||||||||| | ||  |||||||||||| ||| || || | |||  | |||||||||  ||||| ||||||| |||||||    
T  3579 acaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaattatacactcataattcaagtaatgcgtataacattatatcacatcata 3480  T
Q  123 ttcaacatta--acatttcataacagcttcacagattgtaattaac 166  Q
     ||||||| |  |||| | | |||||||||| ||||| ||||||||    
T  3479 atcaacatcaacacatcttaaaacagcttcatagattataattaac 3434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 453 - 514
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacc 191  Q
    |||||| ||||||||||||||||||||   | ||||| ||||| ||| ||||||||||||||    
T  453 ttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattactacc 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 1544 - 1373
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacata-acgttatatct 115  Q
    |||||||||||||||  || ||||||||| | ||||| ||||||||||||||||| ||||||||||||||| | ||||||||||  ||  |||||  ||     
T  1544 cagatcacaacaacattataacttcataacaacaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgcaattattcgttaagtca 1446  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattacta 189  Q
    ||| ||| ||| | |||||| ||||||||||||||||||||   | ||||| ||||| ||| ||||||||||||    
T  1445 cattataatcagc-ttaacaattcataacagcttcacagatctcagttaacatcttaaataggtcacattacta 1373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 38837 - 38976
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  | |||||||||||||  ||||||| |||  | |||||||||||||||| ||||||| ||||||| ||||    
T  38837 aacagcatgacataataatatcaaatgcaaataaacaacatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcataatcaa 38936  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    ||| ||||  || | |||||||||||||||| ||||||||    
T  38937 catcaacacatcttaaacagcttcacagattataattaac 38976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 33018 - 33153
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  | |||||||||||||  ||||||| |||  | |||||||||||||||| ||||||| ||||||| ||||    
T  33018 aacagcatgacataataatatcaaatgcaagttaacaacatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcataatcaa 33117  T
Q  128 cattaacatttcat-aacagcttcacagattgtaat 162  Q
    ||| ||||  || | |||||||||||||||| ||||    
T  33118 catcaacacatcttaaacagcttcacagattataat 33153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 8577 - 8438
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||||| ||  |||||| ||||||||  ||||||| |||  | |||||||||||||||| ||||||| || |||| ||||    
T  8577 aacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacataacattatatcacaacataatcaa 8478  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    ||| ||||  || | |||||||||||||||| ||||||||    
T  8477 catcaacacatcttaaacagcttcacagattataattaac 8438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 15642 - 15700
Alignment:
Q  194 agggtccaactctaatcaaattatgcgacacatatcgcaatatcctgacttgcactcag 252  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  15642 agggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcag 15700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 13164 - 13334
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | |||||||||||| ||  |||||| ||||||||  ||||||| |||  | |||||||||||||||| ||||||| || ||||    
T  13164 acaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacataacattatatcacaacata 13263  T
Q  123 ttcaacattaacatttcat-aacagcttcacagattgtaattaacttcttatataagtcacattactaccc 192  Q
     ||||||| ||||  || | ||||| |||||||||| |||||||| ||||   |||||| || ||||||||    
T  13264 atcaacatcaacacatcttaaacagtttcacagattataattaacatcttcattaagtcccaatactaccc 13334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 14019 - 13897
Alignment:
Q  130 ttaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatc 229  Q
    ||||||||||||||||||||||||||||  | ||||| || |||||| ||||  |||||||||||||||||  ||||||  || ||||||||||||  ||    
T  14019 ttaacatttcataacagcttcacagatttcagttaacatcctatataggtcattttactacccaagggtccttctctaaataagttatgcgacacaggtc 13920  T
Q  230 gcaatatcctgacttgcactcag 252  Q
    ||||  | || ||||||||||||    
T  13919 gcaaagttctcacttgcactcag 13897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 2055 - 2135
Alignment:
Q  132 aacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaa 212  Q
    ||||| ||||| ||||||||||||||| | ||||||||||||||| ||| |||||||||| ||||||||| | ||||||||    
T  2055 aacatctcatatcagcttcacagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 2135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 22954 - 23098
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | |||||||||| | ||  |||||||||||||||  ||||||| |||  | |||||||||||||||| ||||||| |||| ||    
T  22954 acaaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatattcaattatacttcaagtaatgcacataacattatatcacatcgta 23053  T
Q  123 ttcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
     ||||||| ||||  || | |||||||||||||||| ||| ||||    
T  23054 atcaacatcaacacatcttaaacagcttcacagattataaataac 23098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 17166 - 17083
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttc-aacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||| | ||||||||||||| | ||||||||||    
T  17166 cagatcacatcaacagcataacttcataatatcaatt-catttccaacaacatcttgaacattcaataatatttcaagtaatgca 17083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 21746 - 21626
Alignment:
Q  132 aacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgc 231  Q
    ||||| ||||||||||||||||||||| | ||||| ||||||||| ||| |||||||||| ||||||||| | |||| ||| | | || ||||| ||| |    
T  21746 aacatctcataacagcttcacagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcac 21647  T
Q  232 aatatcctgacttgcactcag 252  Q
    || || || ||||||||||||    
T  21646 aacattctcacttgcactcag 21626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 29638 - 29518
Alignment:
Q  132 aacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacatatcgc 231  Q
    ||||| ||||||||||||||||||||| | ||||| ||||||||| ||| |||||||||| ||||||||| | |||| ||| | | || ||||| ||| |    
T  29638 aacatctcataacagcttcacagattgcagttaacatcttatataggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcac 29539  T
Q  232 aatatcctgacttgcactcag 252  Q
    || || || ||||||||||||    
T  29538 aacattctcacttgcactcag 29518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 242
Target Start/End: Original strand, 39553 - 39768
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  |||||||||||| ||  || || | |||  | |||||||||||||||| ||||||| ||||||| ||||    
T  39553 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcacataacattatatcacatcataatcaa 39652  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaacttc-ttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacaca 225  Q
    ||| ||||  || | |||||||||| ||||| |||||||| || |||| |||||| || |||||||| | ||| |||| || | ||| || |||||||||    
T  39653 catcaacacatcttaaacagcttcatagattataattaacatcattat-taagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacaca 39751  T
Q  226 tatcgcaatatcctgac 242  Q
     ||||||| ||||||||    
T  39752 gatcgcaaaatcctgac 39768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 201
Target Start/End: Original strand, 42689 - 42867
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataa-cgttatatct 115  Q
    |||||||||||||||  |  ||||||||||||||||| ||||||||||   |||| ||||||||||||||| | ||||||||||  ||| | ||| |||     
T  42689 cagatcacaacaacatta--acttcataatatcaatt-catttcaaca---tcttgatcattcaataatatttcaagtaatgcatttaatcattaaatca 42782  T
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtcca 201  Q
    ||| | | ||| | |||||| ||||||||||||||||||||   | ||||| ||||| ||| |||||||||||||| |||||||||    
T  42783 cattagaatcagc-ttaacagttcataacagcttcacagatctcagttaacatcttaaataggtcacattactacctaagggtcca 42867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 242
Target Start/End: Complemental strand, 75259 - 75044
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  |||||||||||| ||  || || | |||  | |||||||||||||||| ||||||| ||||||| ||||    
T  75259 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcacataacattatatcacatcataatcaa 75160  T
Q  128 cattaacatttcat-aacagcttcacagattgtaattaacttc-ttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacaca 225  Q
    ||| ||||  || | |||||||||| ||||| |||||||| || |||| |||||| || |||||||| | ||| |||| || | ||| || |||||||||    
T  75159 catcaacacatcttaaacagcttcatagattataattaacatcattat-taagtctcaatactaccccaaggttcaacccttaacaacttgtgcgacaca 75061  T
Q  226 tatcgcaatatcctgac 242  Q
     ||||||| ||||||||    
T  75060 gatcgcaaaatcctgac 75044  T

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Target: scaffold0011 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 51985 - 52129
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcata 122  Q
    |||| ||||||||||| | |||||||||||| ||  |||||| ||||||||  ||||||| |||  | |||||||||||||||| ||||||| || ||||    
T  51985 acaaaaacagcatgacataataatatcaattgcaagtcaacatcatcttaaatattcaattatacttcaagtaatgcacataacattatatcacaacata 52084  T
Q  123 ttcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
     || |||| ||||  || | |||||||||||||||| ||||||||    
T  52085 atctacatcaacacatcttaaacagcttcacagattataattaac 52129  T

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Target: scaffold0166 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 10097 - 10015
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||| ||| || || |||| |||||||||||| ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  10097 cagatcacatcaatagtataactttataatatcaatt-catttcaacaacatcttgatcattcaataatatttcaagtaatgca 10015  T

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Target: scaffold0647 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 6170 - 6058
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat 121  Q
    |||| ||||||||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| |||||||||||||||| ||||||| ||||||    
T  6170 acaaaaacagcatgacatgataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcacataacattatatcacatcat 6072  T
Q  122 attcaacattaaca 135  Q
    | ||||||| ||||    
T  6071 aatcaacatcaaca 6058  T

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Target: scaffold0292 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 3542 - 3686
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat 121  Q
    |||| ||||||||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| |||||||||| ||||| ||||||| ||||||    
T  3542 acaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcaaataacattatatcacatcat 3640  T
Q  122 attcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    | ||||||| ||||  || | |||||||||| ||||| ||||||||    
T  3641 aatcaacatcaacacatcttaaacagcttcatagattataattaac 3686  T

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Target: scaffold0292; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 422 - 526
Alignment:
Q  31 agcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaacat 130  Q
    |||||||| | ||||||||||||  |  |||||||||||||||  |||| || |||  | |||||||||||||||| ||||||| ||||||| |||||||    
T  422 agcatgacgtaataatatcaattggaagtcaacaacatcttaaatattcgattatacttcaagtaatgcacataacattatatcacatcataatcaacat 521  T
Q  131 taaca 135  Q
     ||||    
T  522 caaca 526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 13283 - 13427
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat 121  Q
    |||| ||||||||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| |||||||||| ||||| ||||||| ||||||    
T  13283 acaaaaacagcatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcatataacattatatcacatcat 13381  T
Q  122 attcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    | ||||||| ||||  || | |||||||||||| ||| ||||||||    
T  13382 aatcaacatcaacacatcttaaacagcttcacaaattataattaac 13427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 1923 - 2067
Alignment:
Q  23 acaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatctt-aagtaatgcacataacgttatatctcatcat 121  Q
    |||| |||| |||||| | |||||||||||| || |||| |||||||||||  ||||||  || |||| |||||||||||||||| ||||||| ||||||    
T  1923 acaaaaacaacatgacataataatatcaattgcaattcatcaacatcttaaatattcaaatat-tcttcaagtaatgcacataacattatatcacatcat 2021  T
Q  122 attcaacattaacatttcat-aacagcttcacagattgtaattaac 166  Q
    | ||||||| ||||  || | || ||||||||||||| ||||||||    
T  2022 aatcaacatcaacacatcttaaatagcttcacagattataattaac 2067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 207885 - 207811
Alignment:
Q  27 caacagcatgacttcataatatcaatttcatttcaa-caacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||| || |||||||||||||||||   |||||| ||||| ||| ||||||||||||||| | ||||||||||    
T  207885 caacagtataacttcataatatcaattcattttcaaacaacaacttgatcattcaataatatttcaagtaatgca 207811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 7453 - 7549
Alignment:
Q  116 catcatattcaacattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaa 212  Q
    |||||||||||||   ||||| ||||| ||| |||| |||||| | ||||||||||||||| ||| |||||||||| ||||||||| | ||||||||    
T  7453 catcatattcaacgcaaacatctcatatcagtttcatagattgcagttaacttcttatataggtctcattactacctaagggtccatccctaatcaa 7549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1052 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 2967 - 3049
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||| |||||  || |||| ||||||||||||  |||||||||||||||| ||||||||||||||| | ||||||||||    
T  2967 cagatcacatcaacaatataactttataatatcaatta-atttcaacaacatcttgatcattcaataatatttcaagtaatgca 3049  T

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Target: scaffold0022 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 73821 - 73740
Alignment:
Q  17 cagatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||||  || ||||||| ||||||||| ||||||| ||||||||| ||||||||||||||| | ||||||||||    
T  73821 cagatcacaacaacattat-acttcatcatatcaatt-catttcatcaacatcttgatcattcaataatatttcaagtaatgca 73740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 4584 - 4796
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  |||||||||||| ||  || || | |||  | |||||||||  ||||| ||||||| ||||||| ||||    
T  4584 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 4683  T
Q  128 cattaacatttcataa-cagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacat 226  Q
    ||| ||||  || ||| |||||||||||||| |||||||| || |   |||||| || |||||||| | ||| ||||||| | ||| || ||||||||      
T  4684 catcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactg 4783  T
Q  227 atcgcaatatcct 239  Q
    ||||||| |||||    
T  4784 atcgcaaaatcct 4796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 12166 - 12378
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  |||||||||||| ||  || || | |||  | |||||||||  ||||| ||||||| ||||||| ||||    
T  12166 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 12265  T
Q  128 cattaacatttcataa-cagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacat 226  Q
    ||| ||||  || ||| |||||||||||||| |||||||| || |   |||||| || |||||||| | ||| ||||||| | ||| || ||||||||      
T  12266 catcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactg 12365  T
Q  227 atcgcaatatcct 239  Q
    ||||||| |||||    
T  12366 atcgcaaaatcct 12378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 22118 - 22330
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||| | ||  |||||||||||| ||  || || | |||  | |||||||||  ||||| ||||||| ||||||| ||||    
T  22118 aacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatatacattcataattcaagtaatgcgtataacattatatcacatcataatcaa 22217  T
Q  128 cattaacatttcataa-cagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacat 226  Q
    ||| ||||  || ||| |||||||||||||| |||||||| || |   |||||| || |||||||| | ||| ||||||| | ||| || ||||||||      
T  22218 catcaacacatcttaaacagcttcacagattataattaacatcatcattaagtctcaatactaccccaaggttcaactcttaacaacttgtgcgacactg 22317  T
Q  227 atcgcaatatcct 239  Q
    ||||||| |||||    
T  22318 atcgcaaaatcct 22330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 154
Target Start/End: Complemental strand, 15460 - 15336
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatctcatcatattca 126  Q
    ||||||||||| | ||||||||||||||| |||||||||||||| |  |||| |||||| |||||||||||||| | ||| ||||||| ||| ||| |||    
T  15460 aacagcatgacataataatatcaatttcaattcaacaacatcttgaatattcaaataat-tcttaagtaatgcataaaacattatatcacattataatca 15362  T
Q  127 acattaacatttcataacagcttcacag 154  Q
       ||| ||||||| || ||||||||||    
T  15361 --cttatcatttcacaatagcttcacag 15336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 10471 - 10424
Alignment:
Q  26 acaacagcatgacttcataatatcaatttcatttcaacaacatcttaa 73  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||||    
T  10471 acaacagcatgacataataatatcaatttcaattcaacaacatcttaa 10424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 4928 - 5056
Alignment:
Q  30 cagcatgacttcataatatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatctcatcatattcaac 128  Q
    ||||||||| | |||||||||| | || ||||||||||||||||  |||| |||||| ||| |||||||||| | ||| ||||||| ||||||| |||||    
T  4928 cagcatgacataataatatcaaatgcaattcaacaacatcttaagtattcaaataat-tctcaagtaatgcataaaacattatatcacatcataatcaac 5026  T
Q  129 attaacatttcat-aacagcttcacagatt 157  Q
    |  ||||  || | ||||||||||||||||    
T  5027 aacaacacatcttaaacagcttcacagatt 5056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 12937 - 13006
Alignment:
Q  132 aacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtcca 201  Q
    ||||| |||||  ||||||||| |||| | ||||||||||||||| ||| |||||||||| |||||||||    
T  12937 aacatctcatattagcttcacaaattgcagttaacttcttatataggtctcattactacctaagggtcca 13006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 30795 - 30716
Alignment:
Q  19 gatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||  || ||||||||| | ||||| ||||||||| ||||||| ||||||||||||||| | ||||||||||    
T  30795 gatcacaacaacattat-acttcataacaacaatt-catttcaactacatctttatcattcaataatatttcaagtaatgca 30716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 71376 - 71500
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattc-aataatatcttaagtaatgcacataacgttatatctcatcatattca 126  Q
    ||||||||||| | ||| ||||||||||| |||||||||||||| |  |||| |||||| ||||| |||||||| | ||| ||||||| ||| ||| |||    
T  71376 aacagcatgacataatattatcaatttcaattcaacaacatcttgagtattcaaataat-tcttaggtaatgcataaaacattatatcacattataatca 71474  T
Q  127 acattaacatttcataacagcttcacag 154  Q
       ||||||||||| || ||||||||||    
T  71475 --cttaacatttcacaatagcttcacag 71500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 71147 - 71194
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| | || |||||||    
T  71147 ttcatttcaacaacatcttgatcattcaataatatttaaaataatgca 71194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 239
Target Start/End: Complemental strand, 33001 - 32791
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||||| || ||||||||||||||||  |||| || |||  |  ||||||||| ||||| ||||| | ||||||  ||||    
T  33001 aacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-attatacttcgagtaatgcatataacattataacacatcatgatcaa 32903  T
Q  128 cattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacata 227  Q
    ||| | |||   | || ||||||||||||| ||| ||||  |||  ||||||  || |||||||| | ||| ||||||| | ||| |  ||||||||| |    
T  32902 catcagcatcataaaatagcttcacagattataactaacaccttcaataagtttcaatactaccccaaggttcaactcttaacaattggtgcgacacaga 32803  T
Q  228 tcgcaatatcct 239  Q
    |||||| |||||    
T  32802 tcgcaaaatcct 32791  T

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Target: scaffold0120; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 46004 - 46214
Alignment:
Q  28 aacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaa 127  Q
    ||||||||||| | |||||||||||| || ||||||||||||||||  |||| || |||  |  ||||||||| ||||| ||||| | ||||||  ||||    
T  46004 aacagcatgacataataatatcaattgcaattcaacaacatcttaaatattc-attatacttcgagtaatgcatataacattataacacatcatgatcaa 46102  T
Q  128 cattaacatttcataacagcttcacagattgtaattaacttcttatataagtcacattactacccaagggtccaactctaatcaaattatgcgacacata 227  Q
    ||| | |||   | || ||||||||||||| ||| ||||  |||  ||||||  || |||||||| | ||| ||||||| | ||| |  ||||||||| |    
T  46103 catcagcatcataaaatagcttcacagattataactaacaccttcaataagtttcaatactaccccaaggttcaactcttaacaattggtgcgacacaga 46202  T
Q  228 tcgcaatatcct 239  Q
    |||||| |||||    
T  46203 tcgcaaaatcct 46214  T

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Target: scaffold0070 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 191
Target Start/End: Original strand, 4613 - 4764
Alignment:
Q  40 tcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaacattaacatttc 139  Q
    |||||||||||| |  | ||||||||||||||||  ||||| | |||  | |||||||||| |  || ||||||| ||||||  ||||||| ||||| |     
T  4613 tcataatatcaaatataattcaacaacatcttaaatattcatttatacttcaagtaatgcataatacattatatcacatcatgatcaacatcaacatctt 4712  T
Q  140 ataacagcttcacagattgtaattaacttcttatataagtcacattactacc 191  Q
    | |||||| ||||| ||| |||||||| ||||  ||||||| || |||||||    
T  4713 aaaacagcctcacaaattataattaacatcttcaataagtctcaatactacc 4764  T

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Target: scaffold0051 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 30969 - 31016
Alignment:
Q  53 ttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    ||||||||||||||||||| ||||||||||||||| |  |||||||||    
T  30969 ttcatttcaacaacatcttgatcattcaataatatttcgagtaatgca 31016  T

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Target: scaffold0309 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 6704 - 6826
Alignment:
Q  45 atatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaacattaacatttcata-a 143  Q
    ||||||||  || ||||||||||||||||  ||||||  ||   | |||||||||| | ||||||||||| ||||||| ||||||  ||||| ||||| |    
T  6704 atatcaatagcaattcaacaacatcttaaatattcaaacattattcaagtaatgcataaaacgttatatcacatcataatcaacaacaacatatcatata 6803  T
Q  144 cagcttcacagattgtaattaac 166  Q
    |||||| ||||||| ||| ||||    
T  6804 cagctttacagattataaataac 6826  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 51848 - 51790
Alignment:
Q  108 ttatatctcatcatat-tcaacattaacatttcataacagcttcacagattgtaattaa 165  Q
    ||||||| |||||||  |||||||||| || |||||||||||||||| |||||||||||    
T  51848 ttatatcacatcataaatcaacattaatatctcataacagcttcacaaattgtaattaa 51790  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 422585 - 422504
Alignment:
Q  18 agatcacaacaacagcatgacttcataatatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgca 100  Q
    |||||||||||||| ||| | ||||||| | ||||| ||||||||||||||||  ||||||||| ||||  | ||||||||||    
T  422585 agatcacaacaacatcataatttcataacaacaatt-catttcaacaacatctagatcattcaagaataattcaagtaatgca 422504  T

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Target: scaffold0490 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 2046 - 2143
Alignment:
Q  45 atatcaatttcatttcaacaacatcttaatcattcaataatatcttaagtaatgcacataacgttatatctcatcatattcaacattaacatttcata 142  Q
    ||||||||| || ||||||||||||||||  ||||||  ||   | |||||||||| | ||| ||||||||||||||| ||||||  ||||| |||||    
T  2046 atatcaattgcaattcaacaacatcttaaatattcaaacattattcaagtaatgcataaaacattatatctcatcataatcaacaacaacatatcata 2143  T

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