View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3819_low_3 (Length: 414)

Name: NF3819_low_3
Description: NF3819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3819_low_3
NF3819_low_3
[»] chr6 (23 HSPs)
chr6 (34-392)||(31895579-31895937)
chr6 (36-375)||(14262414-14262753)
chr6 (38-392)||(34773296-34773639)
chr6 (141-381)||(34759025-34759266)
chr6 (144-391)||(7497069-7497315)
chr6 (141-391)||(30385034-30385272)
chr6 (34-362)||(6197472-6197800)
chr6 (38-350)||(2300744-2301056)
chr6 (225-389)||(31067567-31067721)
chr6 (33-362)||(1391506-1391835)
chr6 (242-392)||(4200401-4200541)
chr6 (50-350)||(7051744-7052044)
chr6 (36-362)||(29076482-29076810)
chr6 (36-362)||(29111455-29111784)
chr6 (147-342)||(28002661-28002856)
chr6 (141-290)||(3848202-3848348)
chr6 (38-195)||(7497005-7497162)
chr6 (32-83)||(30385290-30385341)
chr6 (142-251)||(656957-657065)
chr6 (141-206)||(28002613-28002678)
chr6 (318-362)||(2238678-2238722)
chr6 (143-206)||(3848114-3848177)
chr6 (32-83)||(34759284-34759334)
[»] chr4 (83 HSPs)
chr4 (34-392)||(5441287-5441645)
chr4 (34-392)||(27767939-27768297)
chr4 (38-390)||(54341031-54341383)
chr4 (36-392)||(37828367-37828721)
chr4 (33-389)||(51320803-51321159)
chr4 (32-375)||(54853450-54853793)
chr4 (34-390)||(30967276-30967622)
chr4 (40-391)||(32321980-32322331)
chr4 (141-381)||(37915817-37916057)
chr4 (41-391)||(41725015-41725359)
chr4 (141-391)||(23987204-23987444)
chr4 (222-392)||(48261198-48261368)
chr4 (44-391)||(49834799-49835126)
chr4 (42-391)||(49501485-49501828)
chr4 (42-391)||(49507550-49507893)
chr4 (42-359)||(50018142-50018449)
chr4 (34-391)||(5799861-5800208)
chr4 (38-293)||(29649731-29649986)
chr4 (38-362)||(25331018-25331342)
chr4 (36-362)||(41881077-41881405)
chr4 (141-348)||(44770862-44771070)
chr4 (49-362)||(32950831-32951144)
chr4 (34-350)||(1044693-1045006)
chr4 (149-359)||(55302841-55303051)
chr4 (38-374)||(12913110-12913437)
chr4 (141-375)||(32683990-32684203)
chr4 (141-371)||(36479228-36479447)
chr4 (38-350)||(22201902-22202214)
chr4 (141-362)||(12112935-12113156)
chr4 (142-362)||(34228578-34228798)
chr4 (147-362)||(1112889-1113104)
chr4 (141-369)||(9163066-9163286)
chr4 (38-362)||(39479350-39479676)
chr4 (30-336)||(19740929-19741234)
chr4 (34-327)||(28541581-28541874)
chr4 (43-362)||(37046445-37046766)
chr4 (141-362)||(7007364-7007585)
chr4 (138-350)||(39307260-39307472)
chr4 (38-362)||(30009672-30009996)
chr4 (141-350)||(3436583-3436792)
chr4 (175-391)||(28483923-28484127)
chr4 (175-362)||(42786708-42786895)
chr4 (36-348)||(20021229-20021531)
chr4 (43-362)||(31314737-31315042)
chr4 (222-362)||(41320881-41321021)
chr4 (147-362)||(46635643-46635852)
chr4 (141-337)||(53275829-53276025)
chr4 (43-362)||(24130976-24131286)
chr4 (141-320)||(28370914-28371093)
chr4 (38-315)||(23464840-23465119)
chr4 (263-371)||(8711978-8712086)
chr4 (147-328)||(25446047-25446227)
chr4 (38-367)||(40537150-40537464)
chr4 (222-327)||(7249795-7249900)
chr4 (263-362)||(24736447-24736546)
chr4 (37-201)||(37915671-37915835)
chr4 (97-299)||(25504697-25504899)
chr4 (227-362)||(27454073-27454208)
chr4 (228-362)||(56445350-56445474)
chr4 (38-198)||(29855569-29855728)
chr4 (138-350)||(41581796-41582007)
chr4 (283-370)||(36727937-36728023)
chr4 (36-195)||(23987141-23987300)
chr4 (282-367)||(11090435-11090520)
chr4 (34-89)||(56445632-56445687)
chr4 (33-161)||(11090273-11090401)
chr4 (141-210)||(11090339-11090408)
chr4 (141-206)||(37915733-37915798)
chr4 (41-89)||(467773-467821)
chr4 (42-89)||(24736335-24736382)
chr4 (38-89)||(28483870-28483921)
chr4 (38-89)||(34141634-34141685)
chr4 (141-237)||(46635804-46635900)
chr4 (138-203)||(7007318-7007384)
chr4 (41-195)||(32684108-32684261)
chr4 (141-237)||(1112841-1112937)
chr4 (34-89)||(6334463-6334518)
chr4 (34-89)||(6335413-6335468)
chr4 (99-194)||(39307374-39307469)
chr4 (141-183)||(42786716-42786758)
chr4 (141-203)||(7249968-7250031)
chr4 (36-89)||(36728080-36728133)
chr4 (38-83)||(42786654-42786699)
[»] chr1 (61 HSPs)
chr1 (34-392)||(6312451-6312809)
chr1 (35-392)||(25612035-25612392)
chr1 (34-391)||(9322466-9322823)
chr1 (38-387)||(29396358-29396707)
chr1 (34-387)||(15835023-15835376)
chr1 (99-392)||(51701522-51701815)
chr1 (32-372)||(48177447-48177787)
chr1 (36-391)||(28387359-28387714)
chr1 (38-391)||(46327923-46328276)
chr1 (34-374)||(29219165-29219493)
chr1 (46-375)||(18798380-18798689)
chr1 (141-375)||(38536081-38536305)
chr1 (141-375)||(38558299-38558523)
chr1 (38-371)||(9577418-9577751)
chr1 (38-391)||(45272468-45272809)
chr1 (33-279)||(49230762-49231008)
chr1 (41-346)||(5495117-5495412)
chr1 (37-359)||(21222028-21222349)
chr1 (43-350)||(35279558-35279865)
chr1 (36-362)||(45760004-45760331)
chr1 (34-360)||(35679125-35679451)
chr1 (38-362)||(28824368-28824691)
chr1 (97-362)||(19451803-19452068)
chr1 (45-372)||(48668770-48669084)
chr1 (33-362)||(50192545-50192875)
chr1 (141-362)||(37014635-37014856)
chr1 (43-362)||(49198264-49198581)
chr1 (142-362)||(6304247-6304468)
chr1 (141-362)||(47780695-47780916)
chr1 (34-347)||(32588963-32589277)
chr1 (43-362)||(47654346-47654668)
chr1 (37-242)||(8141243-8141448)
chr1 (141-337)||(45535928-45536124)
chr1 (45-350)||(49417972-49418277)
chr1 (37-322)||(730029-730314)
chr1 (225-350)||(31572204-31572329)
chr1 (99-362)||(29556046-29556310)
chr1 (141-328)||(48524303-48524490)
chr1 (36-244)||(22183249-22183457)
chr1 (37-350)||(33025392-33025696)
chr1 (38-201)||(953700-953863)
chr1 (36-126)||(42290723-42290813)
chr1 (222-314)||(51085860-51085952)
chr1 (141-280)||(47784371-47784509)
chr1 (37-203)||(19452004-19452170)
chr1 (230-289)||(955823-955882)
chr1 (225-280)||(31622536-31622591)
chr1 (247-349)||(38319996-38320098)
chr1 (36-185)||(14494091-14494237)
chr1 (38-161)||(38536243-38536366)
chr1 (38-161)||(38558461-38558584)
chr1 (138-201)||(51701519-51701582)
chr1 (141-203)||(953761-953823)
chr1 (141-203)||(14494151-14494213)
chr1 (244-290)||(43885157-43885203)
chr1 (138-203)||(29556043-29556108)
chr1 (146-206)||(48524266-48524326)
chr1 (146-179)||(25831084-25831117)
chr1 (38-83)||(28541385-28541430)
chr1 (39-124)||(25831139-25831224)
chr1 (139-199)||(45535884-45535944)
[»] chr8 (49 HSPs)
chr8 (33-392)||(14782099-14782458)
chr8 (34-392)||(44725774-44726132)
chr8 (36-375)||(18958708-18959047)
chr8 (36-381)||(19717856-19718201)
chr8 (45-391)||(39467433-39467778)
chr8 (34-391)||(10295344-10295703)
chr8 (36-375)||(9288438-9288770)
chr8 (38-392)||(18305935-18306279)
chr8 (36-375)||(4402993-4403332)
chr8 (38-391)||(7466223-7466566)
chr8 (39-391)||(26855957-26856308)
chr8 (36-375)||(42305776-42306105)
chr8 (141-391)||(43166655-43166905)
chr8 (38-375)||(16362084-16362411)
chr8 (97-375)||(32497472-32497740)
chr8 (38-375)||(31623583-31623900)
chr8 (36-280)||(4031334-4031578)
chr8 (35-362)||(26374424-26374749)
chr8 (33-362)||(5576614-5576943)
chr8 (37-362)||(2704813-2705138)
chr8 (45-362)||(42938111-42938428)
chr8 (141-362)||(24501807-24502028)
chr8 (36-362)||(42735271-42735597)
chr8 (38-362)||(23115163-23115486)
chr8 (43-362)||(7506893-7507212)
chr8 (147-347)||(10392246-10392446)
chr8 (141-362)||(42937344-42937563)
chr8 (175-375)||(37857144-37857334)
chr8 (139-374)||(39189798-39190030)
chr8 (43-362)||(41478990-41479299)
chr8 (97-362)||(43959605-43959859)
chr8 (42-195)||(43166809-43166962)
chr8 (43-280)||(32711358-32711595)
chr8 (222-362)||(4950010-4950150)
chr8 (228-299)||(8410455-8410526)
chr8 (222-337)||(13478269-13478384)
chr8 (40-199)||(32497373-32497532)
chr8 (42-183)||(39189944-39190085)
chr8 (293-340)||(4031294-4031341)
chr8 (42-89)||(43308546-43308593)
chr8 (139-199)||(29930843-29930904)
chr8 (231-279)||(9770497-9770545)
chr8 (223-279)||(41070018-41070074)
chr8 (33-83)||(8543402-8543452)
chr8 (33-83)||(24502044-24502094)
chr8 (39-89)||(37857092-37857142)
chr8 (138-211)||(9770962-9771035)
chr8 (141-206)||(32497432-32497497)
chr8 (34-82)||(9771089-9771137)
[»] chr3 (87 HSPs)
chr3 (34-392)||(36674095-36674453)
chr3 (36-391)||(44906479-44906834)
chr3 (37-375)||(11431412-11431750)
chr3 (36-392)||(31646251-31646605)
chr3 (141-392)||(34483995-34484246)
chr3 (36-391)||(26107146-26107501)
chr3 (48-392)||(54628740-54629085)
chr3 (33-391)||(52617937-52618289)
chr3 (38-367)||(40897030-40897360)
chr3 (34-391)||(48379041-48379397)
chr3 (140-390)||(32580166-32580415)
chr3 (141-391)||(17946278-17946528)
chr3 (38-391)||(51737693-51738044)
chr3 (36-364)||(50903233-50903564)
chr3 (141-372)||(52810368-52810599)
chr3 (34-392)||(10660418-10660752)
chr3 (30-387)||(23753377-23753713)
chr3 (37-375)||(50762042-50762370)
chr3 (145-387)||(18749606-18749848)
chr3 (38-346)||(20832882-20833187)
chr3 (141-375)||(10728633-10728857)
chr3 (141-381)||(39038030-39038260)
chr3 (140-375)||(37454850-37455075)
chr3 (34-362)||(20498093-20498420)
chr3 (50-371)||(6035039-6035359)
chr3 (45-362)||(19253721-19254038)
chr3 (45-362)||(37820472-37820789)
chr3 (38-362)||(996081-996404)
chr3 (38-362)||(6589450-6589775)
chr3 (33-362)||(10139141-10139469)
chr3 (43-362)||(3206200-3206510)
chr3 (29-347)||(35337612-35337930)
chr3 (97-362)||(44762032-44762297)
chr3 (141-362)||(3999640-3999861)
chr3 (141-359)||(33807796-33808015)
chr3 (141-362)||(40246834-40247055)
chr3 (43-362)||(54625484-54625803)
chr3 (100-374)||(44276338-44276598)
chr3 (45-362)||(25418260-25418577)
chr3 (141-362)||(29448853-29449074)
chr3 (146-350)||(33996548-33996752)
chr3 (193-391)||(39842460-39842648)
chr3 (149-362)||(53929123-53929336)
chr3 (228-362)||(5825139-5825273)
chr3 (141-349)||(29029996-29030203)
chr3 (32-211)||(18749451-18749630)
chr3 (147-342)||(51699495-51699689)
chr3 (43-350)||(52114422-52114728)
chr3 (175-285)||(539476-539586)
chr3 (141-289)||(6975739-6975884)
chr3 (38-192)||(27240408-27240562)
chr3 (293-370)||(45862983-45863060)
chr3 (141-299)||(1440010-1440169)
chr3 (35-251)||(12103516-12103729)
chr3 (141-322)||(22057751-22057933)
chr3 (156-374)||(15492850-15493061)
chr3 (274-362)||(6131228-6131316)
chr3 (141-313)||(55235176-55235347)
chr3 (222-362)||(27899415-27899545)
chr3 (246-362)||(1439889-1440005)
chr3 (36-195)||(52810305-52810464)
chr3 (38-127)||(39842659-39842748)
chr3 (227-289)||(52080003-52080065)
chr3 (222-278)||(23535890-23535946)
chr3 (139-203)||(51699675-51699739)
chr3 (138-201)||(6131327-6131390)
chr3 (36-112)||(10728844-10728920)
chr3 (38-89)||(15493999-15494050)
chr3 (34-112)||(17946214-17946291)
chr3 (144-183)||(27899379-27899418)
chr3 (39-89)||(539649-539699)
chr3 (141-203)||(1440149-1440210)
chr3 (34-83)||(12734114-12734163)
chr3 (138-202)||(6131410-6131473)
chr3 (141-201)||(27240441-27240501)
chr3 (307-359)||(33807678-33807730)
chr3 (37-89)||(50901209-50901261)
chr3 (40-82)||(29029895-29029937)
chr3 (141-203)||(40246792-40246854)
chr3 (138-183)||(1440084-1440129)
chr3 (294-335)||(12103733-12103774)
chr3 (34-83)||(16010746-16010795)
chr3 (38-75)||(32580063-32580100)
chr3 (141-186)||(38772325-38772370)
chr3 (141-177)||(2024155-2024191)
chr3 (36-87)||(39037982-39038031)
chr3 (139-179)||(53929339-53929378)
[»] chr7 (78 HSPs)
chr7 (36-392)||(28342227-28342583)
chr7 (38-392)||(29614728-29615082)
chr7 (38-390)||(23101180-23101532)
chr7 (40-383)||(39783983-39784326)
chr7 (39-391)||(9882202-9882553)
chr7 (36-391)||(18838269-18838624)
chr7 (38-391)||(3022808-3023161)
chr7 (38-381)||(7993024-7993367)
chr7 (41-391)||(33382522-33382872)
chr7 (47-391)||(28034770-28035114)
chr7 (34-391)||(37327805-37328152)
chr7 (50-391)||(12740267-12740607)
chr7 (149-391)||(8675326-8675567)
chr7 (41-391)||(44121875-44122216)
chr7 (141-392)||(509641-509882)
chr7 (30-391)||(46405406-46405757)
chr7 (34-322)||(32883659-32883948)
chr7 (41-391)||(41827199-41827539)
chr7 (36-371)||(10068346-10068682)
chr7 (60-390)||(40460683-40461003)
chr7 (39-391)||(39027980-39028322)
chr7 (45-388)||(44256734-44257077)
chr7 (41-371)||(12963587-12963911)
chr7 (34-362)||(973068-973397)
chr7 (32-362)||(30440679-30441009)
chr7 (138-375)||(29585497-29585723)
chr7 (43-350)||(43581096-43581403)
chr7 (43-362)||(47914160-47914479)
chr7 (34-362)||(12893293-12893621)
chr7 (38-362)||(44343390-44343714)
chr7 (38-347)||(33892269-33892569)
chr7 (36-362)||(17001037-17001343)
chr7 (38-362)||(40996643-40996968)
chr7 (242-391)||(37972832-37972981)
chr7 (48-289)||(19251431-19251672)
chr7 (38-362)||(18914729-18915053)
chr7 (43-362)||(47879062-47879381)
chr7 (43-350)||(20275269-20275576)
chr7 (97-362)||(34695221-34695486)
chr7 (36-371)||(3797052-3797377)
chr7 (141-362)||(7719254-7719475)
chr7 (228-374)||(43187339-43187485)
chr7 (169-362)||(7718356-7718549)
chr7 (38-362)||(34008904-34009226)
chr7 (227-362)||(32142911-32143046)
chr7 (141-353)||(47066688-47066881)
chr7 (33-201)||(48117748-48117916)
chr7 (141-362)||(39219371-39219592)
chr7 (141-316)||(10676460-10676635)
chr7 (141-326)||(25805677-25805862)
chr7 (227-327)||(43679492-43679592)
chr7 (227-362)||(7113530-7113665)
chr7 (147-362)||(9179871-9180076)
chr7 (34-289)||(31638760-31639015)
chr7 (140-280)||(44623352-44623492)
chr7 (141-252)||(29893066-29893177)
chr7 (231-363)||(19810874-19810996)
chr7 (36-127)||(21067762-21067853)
chr7 (38-195)||(509580-509737)
chr7 (38-203)||(34695120-34695285)
chr7 (225-286)||(447852-447913)
chr7 (43-337)||(727406-727691)
chr7 (141-299)||(1470291-1470447)
chr7 (36-181)||(43187518-43187663)
chr7 (38-201)||(8078284-8078448)
chr7 (36-192)||(29893003-29893159)
chr7 (36-183)||(10676551-10676698)
chr7 (39-123)||(37973007-37973091)
chr7 (262-371)||(10617024-10617134)
chr7 (333-391)||(32883944-32884002)
chr7 (39-83)||(43679359-43679403)
chr7 (38-89)||(29585439-29585490)
chr7 (344-391)||(29893173-29893220)
chr7 (141-184)||(43187557-43187600)
chr7 (42-89)||(47066630-47066677)
chr7 (144-214)||(7113409-7113479)
chr7 (138-211)||(10616931-10617003)
chr7 (141-185)||(32143132-32143176)
[»] chr5 (32 HSPs)
chr5 (34-392)||(14000069-14000427)
chr5 (40-391)||(13925821-13926172)
chr5 (37-391)||(1152068-1152422)
chr5 (33-367)||(4550246-4550580)
chr5 (42-385)||(4240433-4240766)
chr5 (36-391)||(5948995-5949339)
chr5 (150-391)||(7947538-7947779)
chr5 (34-381)||(40013687-40014021)
chr5 (177-387)||(39852372-39852582)
chr5 (38-362)||(22746185-22746501)
chr5 (32-380)||(37013796-37014124)
chr5 (105-391)||(1461113-1461389)
chr5 (34-362)||(21146951-21147279)
chr5 (34-362)||(33656035-33656365)
chr5 (141-350)||(7016745-7016954)
chr5 (141-350)||(5272925-5273134)
chr5 (138-350)||(139261-139473)
chr5 (141-362)||(27458944-27459164)
chr5 (43-323)||(6460685-6460965)
chr5 (141-359)||(32157891-32158113)
chr5 (145-304)||(14465279-14465438)
chr5 (228-337)||(849225-849334)
chr5 (43-362)||(9689554-9689869)
chr5 (147-362)||(9220711-9220916)
chr5 (38-183)||(7016870-7017015)
chr5 (43-203)||(5273114-5273275)
chr5 (43-127)||(7948546-7948630)
chr5 (141-206)||(5273153-5273218)
chr5 (34-83)||(43319130-43319179)
chr5 (141-237)||(32158059-32158156)
chr5 (141-201)||(16894057-16894117)
chr5 (170-206)||(17518474-17518510)
[»] chr2 (44 HSPs)
chr2 (36-392)||(26788671-26789026)
chr2 (38-391)||(28844444-28844797)
chr2 (36-391)||(33135510-33135864)
chr2 (36-391)||(10657293-10657648)
chr2 (44-375)||(28740277-28740598)
chr2 (147-383)||(18177265-18177501)
chr2 (142-391)||(25288152-25288401)
chr2 (36-381)||(3463558-3463894)
chr2 (38-390)||(13833401-13833743)
chr2 (34-330)||(7026488-7026775)
chr2 (43-362)||(16269585-16269904)
chr2 (34-391)||(215206-215550)
chr2 (36-362)||(24776242-24776568)
chr2 (38-362)||(31170621-31170945)
chr2 (38-362)||(12407269-12407593)
chr2 (43-362)||(22551760-22552079)
chr2 (43-362)||(35316956-35317275)
chr2 (142-391)||(6224535-6224765)
chr2 (97-362)||(20605184-20605449)
chr2 (38-280)||(3574736-3574978)
chr2 (43-362)||(14198574-14198892)
chr2 (39-374)||(10125285-10125612)
chr2 (239-391)||(43078653-43078805)
chr2 (34-337)||(1789327-1789630)
chr2 (141-362)||(43847638-43847859)
chr2 (97-362)||(5093044-5093309)
chr2 (43-313)||(44765669-44765939)
chr2 (141-391)||(378929-379169)
chr2 (54-350)||(32125155-32125454)
chr2 (38-360)||(305464-305788)
chr2 (142-362)||(9120119-9120339)
chr2 (38-289)||(26601270-26601521)
chr2 (313-391)||(7027051-7027129)
chr2 (43-201)||(20605046-20605204)
chr2 (36-181)||(378866-379011)
chr2 (293-371)||(3574971-3575049)
chr2 (36-89)||(43825078-43825131)
chr2 (222-278)||(21370631-21370687)
chr2 (34-112)||(43078560-43078638)
chr2 (141-237)||(20605102-20605198)
chr2 (29-201)||(19144904-19145078)
chr2 (38-83)||(9120057-9120102)
chr2 (141-181)||(8172170-8172210)
chr2 (170-206)||(24193595-24193631)
[»] scaffold0543 (1 HSPs)
scaffold0543 (42-387)||(10452-10797)
[»] scaffold0110 (1 HSPs)
scaffold0110 (56-391)||(39583-39918)
[»] scaffold1504 (1 HSPs)
scaffold1504 (37-391)||(750-1101)
[»] scaffold0042 (2 HSPs)
scaffold0042 (141-391)||(58042-58292)
scaffold0042 (38-127)||(58264-58353)
[»] scaffold0306 (2 HSPs)
scaffold0306 (141-392)||(13873-14114)
scaffold0306 (36-195)||(13810-13969)
[»] scaffold0152 (3 HSPs)
scaffold0152 (141-392)||(21213-21454)
scaffold0152 (262-392)||(28463-28584)
scaffold0152 (36-195)||(21358-21517)
[»] scaffold0922 (1 HSPs)
scaffold0922 (34-287)||(4084-4337)
[»] scaffold0400 (1 HSPs)
scaffold0400 (36-362)||(15028-15351)
[»] scaffold0365 (1 HSPs)
scaffold0365 (36-362)||(15671-15994)
[»] scaffold0054 (3 HSPs)
scaffold0054 (222-391)||(36876-37042)
scaffold0054 (141-195)||(37027-37081)
scaffold0054 (47-89)||(37091-37133)
[»] scaffold0037 (1 HSPs)
scaffold0037 (38-350)||(100099-100411)
[»] scaffold0004 (1 HSPs)
scaffold0004 (138-362)||(102081-102307)
[»] scaffold0113 (1 HSPs)
scaffold0113 (141-362)||(38890-39111)
[»] scaffold0839 (1 HSPs)
scaffold0839 (251-388)||(3661-3798)
[»] scaffold0151 (2 HSPs)
scaffold0151 (175-362)||(38600-38786)
scaffold0151 (43-83)||(38794-38834)
[»] scaffold0347 (2 HSPs)
scaffold0347 (282-381)||(14892-14991)
scaffold0347 (33-127)||(14778-14872)
[»] scaffold0276 (1 HSPs)
scaffold0276 (97-367)||(529-799)
[»] scaffold0010 (6 HSPs)
scaffold0010 (98-208)||(233685-233795)
scaffold0010 (98-208)||(234533-234643)
scaffold0010 (98-208)||(222517-222627)
scaffold0010 (34-72)||(222469-222507)
scaffold0010 (34-72)||(233637-233675)
scaffold0010 (34-72)||(234485-234523)
[»] scaffold0651 (1 HSPs)
scaffold0651 (43-181)||(8655-8793)
[»] scaffold0492 (2 HSPs)
scaffold0492 (34-89)||(12041-12096)
scaffold0492 (42-83)||(11998-12039)
[»] scaffold0007 (1 HSPs)
scaffold0007 (230-305)||(199905-199980)


Alignment Details
Target: chr6 (Bit Score: 264; Significance: 1e-147; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 34 - 392
Target Start/End: Original strand, 31895579 - 31895937
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  31895579 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 31895678  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||||||||||    
T  31895679 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 31895778  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31895779 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatg 31895878  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31895879 aaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 31895937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 36 - 375
Target Start/End: Complemental strand, 14262753 - 14262414
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||||||||||       |||||||||||||||| || | ||||||||| ||         
T  14262753 agggggatgtattggattaggattctacgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaa 14262654  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||       ||||||||||||||    
T  14262653 aagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattc 14262554  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14262553 aaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 14262454  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagtta 375  Q
    |||||| |||||||||||||||||||| ||||||||||||    
T  14262453 aagatgggatttcttgagattgtttttcttttaaaagtta 14262414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 38 - 392
Target Start/End: Original strand, 34773296 - 34773639
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||           
T  34773296 ggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 34773395  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||        |||||||||||||||    
T  34773396 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaa 34773495  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34773496 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaa 34773595  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||           |||||||||||||| ||||||||||||||||    
T  34773596 gatgagatttctt-----------tattttaaaagttactatctttttcttctca 34773639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 141 - 381
Target Start/End: Complemental strand, 34759266 - 34759025
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||       ||||||||||||||||||    
T  34759266 ttgtggtattcaatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaa 34759167  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 339  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34759166 tcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaga 34759067  T
Q  340 tgagatttcttgagattgtttttattttaaaagttaatatct 381  Q
    ||||||||||||||||| ||||| |||||||||||| |||||    
T  34759066 tgagatttcttgagattatttttcttttaaaagttactatct 34759025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 144 - 391
Target Start/End: Original strand, 7497069 - 7497315
Alignment:
Q  144 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 243  Q
    ||||||||||||||||||  |||  | || ||||||||||||  |||||||||||||||||||||||| ||       ||||||||||||||||||||||    
T  7497069 tggtattcaatcaagacttgttgcaacttaaaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 7497168  T
Q  244 tcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 343  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7497169 tcaaatttcgaaggagtgtttaataaattggattttgatggattttgtgg-attttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 7497267  T
Q  344 atttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||| ||||| |||||||||||| ||||| ||| |||||    
T  7497268 atttcttgagattatttttcttttaaaagttactatctctttattctc 7497315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 141 - 391
Target Start/End: Complemental strand, 30385272 - 30385034
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | ||||||||| ||       |||||||||||||||||||    
T  30385272 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaat 30385173  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  30385172 cattcaaatttcgaaggattgtttaataaattggat----------tttgtgggattttgtagtgtaattttaaca--acaaagtctttcatgaaaagat 30385085  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||||||||||||||||| |||||||| ||| ||||| |||||||||    
T  30385084 gagatttcttgagattgtttttcttttaaaaattactatctctttcttctc 30385034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 34 - 362
Target Start/End: Complemental strand, 6197800 - 6197472
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||| |||||||||| ||||||||| |||||||||||| | ||||| || ||       || ||||||||||||| || ||| ||| ||||||       
T  6197800 ttaggggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaa 6197701  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||    
T  6197700 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 6197601  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||    
T  6197600 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 6197501  T
Q  334 aaaagatgagatttcttgagattgttttt 362  Q
    |||| ||||||||||||  ||||||||||    
T  6197500 aaaacatgagatttcttaggattgttttt 6197472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 38 - 350
Target Start/End: Complemental strand, 2301056 - 2300744
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  2301056 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 2300957  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       ||||  ||||||| ||    
T  2300956 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaa 2300857  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  2300856 aatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 2300757  T
Q  338 gatgagatttctt 350  Q
     ||||||||||||    
T  2300756 catgagatttctt 2300744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 225 - 389
Target Start/End: Original strand, 31067567 - 31067721
Alignment:
Q  225 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaag 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  31067567 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaag 31067656  T
Q  325 tctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttc 389  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31067657 tctttcataaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttc 31067721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 33 - 362
Target Start/End: Original strand, 1391506 - 1391835
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||| || |||||||||| |||||||||  |||||||||| || ||||| || ||       |||||||||||||||| || ||| ||| ||||||      
T  1391506 cttaggtgggtgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaa 1391605  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || ||||| ||||||||||||| || ||||||||| || |||||||||  |||||||||||||| | || |||| ||       |||| ||||||    
T  1391606 aaaaagtcttgtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 1391705  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 332  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||  || |||||||||||||||    
T  1391706 ttcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcat 1391805  T
Q  333 gaaaagatgagatttcttgagattgttttt 362  Q
    ||||| |||||||| |||  ||||||||||    
T  1391806 gaaaacatgagattccttaggattgttttt 1391835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 242 - 392
Target Start/End: Complemental strand, 4200541 - 4200401
Alignment:
Q  242 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T
Q  342 agatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4200451 agatttcttgagattgtttttattttaaaagttactatctttttcttctca 4200401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 50 - 350
Target Start/End: Original strand, 7051744 - 7052044
Alignment:
Q  50 gattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtat 149  Q
    ||||| ||||||| | |||||||||||| ||||| || ||       ||||||| |||||||| || ||| ||||||| ||       || |||||||||    
T  7051744 gattaggattctaagagattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttgcaacttaaaaaaagtcttgtggtat 7051843  T
Q  150 tcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 249  Q
     | ||||||| |||||||||||| ||||||||||||  |||| ||||||||| | ||||||| ||       ||| |||| |||||||||||||||||||    
T  7051844 acgatcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaat 7051943  T
Q  250 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 349  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||  ||||||| || |||||||| |||||| |||  |||||||||||    
T  7051944 ttcgaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgagatttct 7052043  T
Q  350 t 350  Q
    |    
T  7052044 t 7052044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 36 - 362
Target Start/End: Original strand, 29076482 - 29076810
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnn 134  Q
    |||||| |||||||||| ||||||||| | |||||||||||| |||||| || ||       ||||||| |||||||| || ||| ||| ||||||        
T  29076482 aggggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaat 29076581  T
Q  135 nnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtat 233  Q
       || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||| ||||| || |||| ||        |||| || ||||    
T  29076582 aaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtat 29076681  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||| ||||| ||||||| || |||||| ||||||||     
T  29076682 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcata 29076781  T
Q  334 aaaagatgagatttcttgagattgttttt 362  Q
    |||| ||||||||| ||  ||||||||||    
T  29076782 aaaacatgagattttttaggattgttttt 29076810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 36 - 362
Target Start/End: Original strand, 29111455 - 29111784
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnn 134  Q
    |||||| |||||||||| ||||||||| | |||||||||||| |||||| || ||       ||||||| |||||||| || ||| ||| ||||||        
T  29111455 aggggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaat 29111554  T
Q  135 nnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn--gtcttgtggta 232  Q
       || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||| ||||| || |||| ||         |||| || |||    
T  29111555 aaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagta 29111654  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 332  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||| ||||| ||||||| || |||||| ||||||||    
T  29111655 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcat 29111754  T
Q  333 gaaaagatgagatttcttgagattgttttt 362  Q
     |||| ||||||||| ||  ||||||||||    
T  29111755 aaaaacatgagattttttaggattgttttt 29111784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 147 - 342
Target Start/End: Original strand, 28002661 - 28002856
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| | |||||||||| |||||||||||   |||||||||||||| | || |||| ||       |||| ||| ||||||||||||||||    
T  28002661 tattcaatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattca 28002760  T
Q  247 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||  ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  28002761 aatttggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 290
Target Start/End: Original strand, 3848202 - 3848348
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||| ||| |||||||||| ||| |||| |||  ||| |||||||||| ||  ||||| ||       || ||||||||||||||||    
T  3848202 ttgtggtattcaatcaaaactttttgtcatttaaaacaagtattgtggtaatcaatcaagactt--catcacttaaaaaaagttttgtggtattcaaaat 3848299  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttg 290  Q
    |||| |||||| ||| ||||||||||||||||| |||||| |||||||||    
T  3848300 catttaaattttgaatgattgtttaataaattgaattttg-tggattttg 3848348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 195
Target Start/End: Original strand, 7497005 - 7497162
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||||||||||||  |||||||| ||||||||||||||||||||||||       | || ||||||||||| || |||| |||||| ||           
T  7497005 ggggatgtattggattagaattctatgagattttaaaagattttttaattatgaaaaagtattctggtattcaatcaagacttgttgcaacttaaaaaaa 7497104  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
    || ||||||||||||||||||| | ||  ||| || ||||||||||||  ||||||||    
T  7497105 gtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaa 7497162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 30385341 - 30385290
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  30385341 tcttagggggatgtattggattaggattctatgagattttaaaagatttttt 30385290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 251
Target Start/End: Original strand, 656957 - 657065
Alignment:
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    |||| ||||||||||||| |||||| ||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||| |||||    
T  656957 tgtgttattcaatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatc 657055  T
Q  242 attcaaattt 251  Q
    ||||||||||    
T  657056 attcaaattt 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 28002613 - 28002678
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    |||| ||||||||||||||||||||   |||| ||||||||||||   ||||||||||||||||||    
T  28002613 ttgtcgtattcaatcaagactctttccaatttaaaaaaagtcttgtcttattcaatcaagattttt 28002678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 2238678 - 2238722
Alignment:
Q  318 gaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  2238678 gaaaaaatctttcatgaaaacatgagatttcttaagattgttttt 2238722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 3848114 - 3848177
Alignment:
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||| ||||||  | || ||||||||||||  |||||||||||| ||||||    
T  3848114 gtggtattcaatcaagattctttgcaacttaaaaaaagtcttgtggtattcaatcaatattttt 3848177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 34759334 - 34759284
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||| |||||    
T  34759334 tcttaggggg-tgtattggattaggattctatgagattttaaaagacttttt 34759284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 264; Significance: 1e-147; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 34 - 392
Target Start/End: Original strand, 5441287 - 5441645
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  5441287 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 5441386  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  5441387 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 5441486  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5441487 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 5441586  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5441587 aaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 5441645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 34 - 392
Target Start/End: Original strand, 27767939 - 27768297
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || | ||||||||||||       
T  27767939 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaa 27768038  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  27768039 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 27768138  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27768139 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 27768238  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27768239 aaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 27768297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 38 - 390
Target Start/End: Original strand, 54341031 - 54341383
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||           
T  54341031 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 54341130  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||||    
T  54341131 gtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 54341230  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54341231 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 54341330  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttct 390  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  54341331 gatgagatttcttgagattgtttttattttaaaagttactatttttttcttct 54341383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 36 - 392
Target Start/End: Complemental strand, 37828721 - 37828367
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||||||||  |||||  | |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||         
T  37828721 agggggatgtattggattagaattct--gagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaa 37828624  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
       | ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||       ||||||||||||||    
T  37828623 aaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattc 37828524  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  37828523 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaa 37828424  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  37828423 aagatgagatttcttgagattgtttttattttaaaaattactatctttttcttctca 37828367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 33 - 389
Target Start/End: Original strand, 51320803 - 51321159
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||||||||||||||||||| ||||||| || ||||||||||| |||||||||||       | |||||||||||||| || ||||||||||| ||      
T  51320803 cttagggggatgtattggattaggattctacggaattttaaaagactttttaattatgaaaaaattttgtggtattcaatcaagactttttgcaacttaa 51320902  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||    
T  51320903 aaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 51321002  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| ||||||    
T  51321003 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcat 51321102  T
Q  333 gaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttc 389  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||    
T  51321103 gaaaagatgagatttcttgagattgtttttcttttaaaagttactatctctttcttc 51321159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 32 - 375
Target Start/End: Complemental strand, 54853793 - 54853450
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttn 131  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||| ||||||||||        |||||||||||||||| || ||||||||||| ||     
T  54853793 tcttagggggatgtattggattaggattttatggaattttaaaagactttttaattacgaaaaagtcttgtggtattcaatcaagactttttgcaactta 54853694  T
Q  132 nnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggt 231  Q
          || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||       ||||||||||    
T  54853693 aaaaaagtcttgtggtattcaatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggt 54853594  T
Q  232 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 331  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54853593 attcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttca 54853494  T
Q  332 tgaaaagatgagatttcttgagattgtttttattttaaaagtta 375  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  54853493 tgaaaagatgagatttcttgagattgtttttcttttaaaagtta 54853450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 34 - 390
Target Start/End: Complemental strand, 30967622 - 30967276
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||| || ||||||||||||||       
T  30967622 ttaggtggatgtattggattatgattttatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 30967523  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||       ||||||||||||    
T  30967522 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtat 30967423  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||||| ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30967422 tcaaaatcattcaaatttcaaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatg 30967333  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttct 390  Q
    |||| || ||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  30967332 aaaaaataagatttcttgagattgttttttttttaaaagttactatctctttcttct 30967276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 40 - 391
Target Start/End: Original strand, 32321980 - 32322331
Alignment:
Q  40 ggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngt 139  Q
    ||||||||||||||| ||||||||  || ||||||||| |||||||||||       | |||||||||||||| || | |||||| || ||       ||    
T  32321980 ggatgtattggattaggattctatcagaatttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagattttttgtaacttaaaaaaagt 32322079  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
      |||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||       ||||||||||||||||||    
T  32322080 catgtgatatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaa 32322179  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 339  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  32322180 tcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaaga 32322279  T
Q  340 tgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||||||| |||||| |||||  |||| |||||||||    
T  32322280 tgagatttcttgagattgtttttcttttaatagttatcatctctttcttctc 32322331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 141 - 381
Target Start/End: Original strand, 37915817 - 37916057
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||||||||||    
T  37915817 ttgtggtattcaatcaagactctctatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 37915916  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  37915917 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagat 37916016  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatct 381  Q
     |||||| |||||||||||||| |||||||||||| |||||    
T  37916017 aagatttattgagattgtttttcttttaaaagttactatct 37916057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 41 - 391
Target Start/End: Original strand, 41725015 - 41725359
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtt 140  Q
    ||||||||| |||| ||||||||   |||||||||||||||||||||||       ||||||| |||||||| || | ||||||||| ||        |     
T  41725015 gatgtattgaattaggattctataaaattttaaaagattttttaattataaaaaagtcttgtgatattcaatcaagattttttgcaacttaaaaaaaata 41725114  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| |||||||||  |       |||||||| ||||||||||    
T  41725115 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaat 41725214  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||| ||||||||||||||   |||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  41725215 cattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagat 41725311  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||||||   ||| ||||||||||||||||| |||||||||||||||    
T  41725312 gagatttcttg---ttggttttattttaaaagttactatctttttcttctc 41725359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 141 - 391
Target Start/End: Original strand, 23987204 - 23987444
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||       |||||||||||||||||||    
T  23987204 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaat 23987303  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||||||||||||||||||| |||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23987304 cattcaaatttcgaaggattgtttaataaattagattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 23987393  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  23987394 gagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 23987444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 222 - 392
Target Start/End: Original strand, 48261198 - 48261368
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 321  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  322 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  48261298 aaatctttcatgaaaatatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 48261368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 44 - 391
Target Start/End: Complemental strand, 49835126 - 49834799
Alignment:
Q  44 gtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttg 143  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       || |||    
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 49835027  T
Q  144 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 243  Q
    |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||||||| ||       ||||||||||||||||||||||    
T  49835026 tggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 49834927  T
Q  244 tcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 343  Q
    |||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  49834926 tcaaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaagaagtctttcattaaaagatgag 49834847  T
Q  344 atttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||| | |||||||||| ||||| |||||||||    
T  49834846 atttcttgagattgtttttctattaaaagttactatctatttcttctc 49834799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 42 - 391
Target Start/End: Complemental strand, 49501828 - 49501485
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaat-taacactttttgcaatttnnnnnnn-gt 139  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||       |||||||||||| ||| ||| |||||||| |||||        ||    
T  49501828 atgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattgaatctaagactttttgtaatttaaaaaaaagt 49501729  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
     |||  ||||||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||| ||       ||||||||| ||||||||    
T  49501728 cttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaa 49501629  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc--atgaaaa 337  Q
    |||||||||||||||| ||||||||||||||||||||          ||||||| ||||||||||||||||||||||||||||||||||||  || ||||    
T  49501628 tcattcaaatttcgaatgattgtttaataaattggat----------tttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaa 49501539  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  49501538 gatgagatttcttgagattgtttttcttttaaaagttattatctctttcttctc 49501485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 42 - 391
Target Start/End: Complemental strand, 49507893 - 49507550
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaat-taacactttttgcaatttnnnnnnn-gt 139  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||       |||||||||||| ||| ||| |||||||| |||||        ||    
T  49507893 atgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattgaatctaagactttttgtaatttaaaaaaaagt 49507794  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
     |||  ||||||||||||||||||||||||||||||| || |||||| |||||||||||||| ||||||||| ||       ||||||||| ||||||||    
T  49507793 cttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaa 49507694  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc--atgaaaa 337  Q
    |||||||||||||||| ||||||||||||||||||||          ||||||| ||||||||||||||||||||||||||||||||||||  || ||||    
T  49507693 tcattcaaatttcgaatgattgtttaataaattggat----------tttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaa 49507604  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  49507603 gatgagatttcttgagattgtttttcttttaaaagttattatctctttcttctc 49507550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 42 - 359
Target Start/End: Original strand, 50018142 - 50018449
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttt 141  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||       |||||||||||||||| || ||||||| ||||||       || |    
T  50018142 atgtattggattagaattctatgggattttaaaatattttttaattataaaaaagtcttgtggtattcaatcaagactttttacaatttaaaaaaagtct 50018241  T
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    | ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||       |||||||||||||||| |||    
T  50018242 tatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatc 50018341  T
Q  242 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 341  Q
    |||||||||| ||||||||||||||||||||| ||||| ||          ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50018342 attcaaattttgaaggattgtttaataaattgaattttaat----------ggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatg 50018431  T
Q  342 agatttcttgagattgtt 359  Q
    |||||| |||||||||||    
T  50018432 agatttattgagattgtt 50018449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 34 - 391
Target Start/End: Original strand, 5799861 - 5800208
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||| || |||| ||||| |||| ||||||||||||||||| |||||||||||       | |||||||||| |||||| ||||||||||| ||       
T  5799861 ttaggggtatctattagattaggattttatgggattttaaaagactttttaattatgaaaagtt-ttgtggtattaaattaagactttttgcaacttaaa 5799959  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggta 232  Q
        ||||||||||||||||||||||||||||||||||||||||||   |||| |||||  ||||| | ||||||||| ||        |||||||||||    
T  5799960 aaaagttttgtggtattcaatcaagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaaaaagtcttgtggta 5800059  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 332  Q
    |||||||||||||||||||| ||||||||||||||||||||||          ||||||| |||||||||| ||||||||||||||||||||||||| ||    
T  5800060 ttcaaaatcattcaaatttcaaaggattgtttaataaattgga----------ttttgtgagattttgtagagtaattttaacaagaaaaagtctttaat 5800149  T
Q  333 gaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||| |||||| |||||||||||||| |||||||||||| ||||| |||| ||||    
T  5800150 gaaaagataagattttttgagattgtttttcttttaaaagttattatctctttcatctc 5800208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 38 - 293
Target Start/End: Complemental strand, 29649986 - 29649731
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||||       | |||||||||||||| || ||||||||||||||           
T  29649986 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaatttaaaaaaa 29649887  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||||||||  || || |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||    
T  29649886 gtcttgtggtattagattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 29649787  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgg 293  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29649786 aatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 25331018 - 25331342
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| |||||||||   |||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  25331018 gggggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 25331117  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||| |||||||    
T  25331118 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaa 25331217  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  25331218 aatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 25331317  T
Q  338 gatgagatttcttgagattgttttt 362  Q
     ||||||||||||  ||||||||||    
T  25331318 catgagatttcttaggattgttttt 25331342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 41881405 - 41881077
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnn 134  Q
    |||||| |||||||||| |||||| || |||||||||||||| |||||| || ||       |||||||||||||||| || ||| ||| ||||||        
T  41881405 aggggggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaa 41881306  T
Q  135 nnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtat 233  Q
       || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        || | |||||||    
T  41881305 aaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtat 41881206  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||    
T  41881205 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 41881106  T
Q  334 aaaagatgagatttcttgagattgttttt 362  Q
    |||| ||||||||||||  ||||||||||    
T  41881105 aaaacatgagatttcttaggattgttttt 41881077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 141 - 348
Target Start/End: Complemental strand, 44771070 - 44770862
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagta-ttcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| ||        |||  ||||||||||||    
T  44771070 ttgtgatattcaatcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtattcaaaa 44770971  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 339  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||||||||||  | |    
T  44770970 tcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtctttcatgacgaca 44770871  T
Q  340 tgagatttc 348  Q
    |||||||||    
T  44770870 tgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 49 - 362
Target Start/End: Complemental strand, 32951144 - 32950831
Alignment:
Q  49 ggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggta 148  Q
    |||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||||| ||    
T  32951144 ggatcatgattctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgtta 32951045  T
Q  149 ttcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaa 248  Q
    ||||||||||| | |||||||||| ||||||||| ||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||||    
T  32951044 ttcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa 32950945  T
Q  249 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 348  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||    
T  32950944 tttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttc 32950845  T
Q  349 ttgagattgttttt 362  Q
    || ||||| |||||    
T  32950844 ttaagatttttttt 32950831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 34 - 350
Target Start/End: Original strand, 1044693 - 1045006
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||| |||||||||| ||||||||| |||||||||||||||||||| || ||       |||||||||||||||| || ||| ||| ||||||       
T  1044693 ttaggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 1044792  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||||| || |||||||||  |||||||||||  |||||||||||||| | || |||| ||       |||| |||||||    
T  1044793 aaa-gtcttgtgttattcaatcaagattccttgtcattt--aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 1044889  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    |||||| ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||    
T  1044890 tcaaaaccattcaactttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 1044989  T
Q  334 aaaagatgagatttctt 350  Q
    |||| || |||||||||    
T  1044990 aaaacataagatttctt 1045006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 149 - 359
Target Start/End: Original strand, 55302841 - 55303051
Alignment:
Q  149 ttcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaa 248  Q
    ||||||||||| |||||||||||||||||||||| ||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||||    
T  55302841 ttcaatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa 55302940  T
Q  249 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 348  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||    
T  55302941 tttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 55303040  T
Q  349 ttgagattgtt 359  Q
    || ||||||||    
T  55303041 ttaagattgtt 55303051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 38 - 374
Target Start/End: Original strand, 12913110 - 12913437
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||| |||| ||||| || |||| | |||||||||||||||||||||| |       |||||||||||||||| || ||| |||  |||||           
T  12913110 ggggatatattcgattaggaatctaagagattttaaaagattttttaattttgaaaaagtcttgtggtattcaatcaagactctttataatttaaaaaaa 12913209  T
Q  138 -gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||       ||||  |||||||||    
T  12913210 agtcttgtggtatttaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattca 12913309  T
Q  237 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 336  Q
    ||||||||||||||| |||||||||||||||||||          |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||     
T  12913310 aaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaag 12913399  T
Q  337 agatgagatttcttgagattgtttttattttaaaagtt 374  Q
    | |||||||||||||  ||| ||||| |||||||||||    
T  12913400 acatgagatttcttggaattatttttcttttaaaagtt 12913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 32684203 - 32683990
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||| |||| ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||       |||||||||||||||||||    
T  32684203 ttgtggtattcaattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcatttaaaaaa-gtcttgtggtattcaaaat 32684105  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||||||||||    
T  32684104 cattcaaatttcgaaggattgtttaataaattggatt--------------------ttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 32684025  T
Q  341 gagatttcttgagattgtttttattttaaaagtta 375  Q
    ||||||| |||||||||||||| ||||||||||||    
T  32684024 gagatttattgagattgtttttcttttaaaagtta 32683990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 141 - 371
Target Start/End: Complemental strand, 36479447 - 36479228
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||       |||| ||||||||||||||    
T  36479447 ttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaat 36479348  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||||           ||||| ||||||| ||| ||||||||||| ||||||| ||    
T  36479347 tattcaaatttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaaaagtcttttatgaaaacat 36479259  T
Q  341 gagatttcttgagattgtttttattttaaaa 371  Q
    |||||||||||||||| ||||| ||||||||    
T  36479258 gagatttcttgagattatttttcttttaaaa 36479228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 38 - 350
Target Start/End: Original strand, 22201902 - 22202214
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       ||||||| |||||||| || ||| ||| ||||||           
T  22201902 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaa 22202001  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||||    
T  22202002 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 22202101  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||| ||||||| || |||||||||||||||   ||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  22202102 aatcattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 22202201  T
Q  338 gatgagatttctt 350  Q
     || |||||||||    
T  22202202 cattagatttctt 22202214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 12112935 - 12113156
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||| | | || |||| ||       ||||  |||||||||||||    
T  12112935 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaat 12113034  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  12113035 cattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 12113134  T
Q  341 gagatttcttgagattgttttt 362  Q
    ||||||||||| ||||||||||    
T  12113135 gagatttcttgggattgttttt 12113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 34228798 - 34228578
Alignment:
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    |||| ||||||||||||| |||||||||||| ||||||||| ||  |||||||||||| ||| || |||| ||       |||| |||||||||||||||    
T  34228798 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatc 34228699  T
Q  242 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 341  Q
    ||| |||||||||| |||||||||||||||  |||||||||||||||||| ||||||| ||||| ||||||| || |||||||||||||||||||| |||    
T  34228698 attgaaatttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 34228599  T
Q  342 agatttcttgagattgttttt 362  Q
    ||||||||| |||||||||||    
T  34228598 agatttcttaagattgttttt 34228578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 147 - 362
Target Start/End: Original strand, 1112889 - 1113104
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||    
T  1112889 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattca 1112988  T
Q  247 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 346  Q
    |||||| || |||||||||||||||  |||||||||||||||||||||||||  ||||  |||||||||| |||||||||||||||||||| ||||||||    
T  1112989 aatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatt 1113088  T
Q  347 tcttgagattgttttt 362  Q
    ||||  ||||||||||    
T  1113089 tcttaggattgttttt 1113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 141 - 369
Target Start/End: Original strand, 9163066 - 9163286
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||  |       |||||||| ||||||||||    
T  9163066 ttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaat 9163165  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| ||||| ||||||| || |||        ||||||||| ||    
T  9163166 cattcaaatttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattttagcatgaa--------tcatgaaaacat 9163257  T
Q  341 gagatttcttgagattgtttttattttaa 369  Q
    ||||||||||  |||||||||| ||||||    
T  9163258 gagatttcttatgattgttttttttttaa 9163286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 38 - 362
Target Start/End: Complemental strand, 39479676 - 39479350
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| |||||| || |  ||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  39479676 gggggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 39479577  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn--gtcttgtggtattc 235  Q
    || ||||| ||||||||||||| || ||||||||| ||||||||||||  |||||||||||||| | || |||| ||         | ||||||||||||    
T  39479576 gtcttgtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattc 39479477  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  39479476 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaa 39479377  T
Q  336 aagatgagatttcttgagattgttttt 362  Q
    |  ||||||||||||  ||||||||||    
T  39479376 agcatgagatttcttaggattgttttt 39479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 19741234 - 19740929
Alignment:
Q  30 agtcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatt 129  Q
    ||||| |||||||||||||  || |||||||||   |||||||||||| |||||| | ||       |||||||||||||||| || ||| ||| |||||    
T  19741234 agtctaagggggatgtattcaatcatgattctaaaagattttaaaagacttttta-tcatgaaaaaatcttgtggtattcaatcaagactctttccaatt 19741136  T
Q  130 tnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtg 229  Q
    |       || ||||| ||||||||||||| ||||||||||||  |||||||| ||  ||||||| |||||| |||| |||| ||       ||||||||    
T  19741135 taaaaaaagtcttgtgttattcaatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtg 19741036  T
Q  230 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 329  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |  ||||||||||||    
T  19741035 gtattaaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtcttt 19740936  T
Q  330 catgaaa 336  Q
    |||||||    
T  19740935 catgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 34 - 327
Target Start/End: Original strand, 28541581 - 28541874
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||| || |||||||||| ||||||||| ||||||||||||||  |||| |||||       |||||||||||||||| || ||| ||| ||||||       
T  28541581 ttaggagggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 28541680  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||||| |||||||||||| |||||||||| |  |||||||||||||| | || |||| ||       |||| |||||||    
T  28541681 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 28541780  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 327  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || ||||||||||    
T  28541781 tcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 43 - 362
Target Start/End: Complemental strand, 37046766 - 37046445
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| || |||||||||||| |||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  37046766 tgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 37046667  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattcaaaatc 241  Q
    ||| ||||||||||||| |||||||||||| |||||||| |||  |||||||||||||| | || |||| ||        |||| ||| |||| ||||||    
T  37046666 gtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatc 37046567  T
Q  242 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg-taattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| |||||  ||||||| || |||||||||||||||||||| ||    
T  37046566 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatat 37046467  T
Q  341 gagatttcttgagattgttttt 362  Q
    ||||||||||  ||||||||||    
T  37046466 gagatttcttaggattgttttt 37046445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 7007364 - 7007585
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| ||| |||||||| ||||||||| ||  |||||||||||||| | || |||| ||       |||| ||||||||||||||    
T  7007364 ttgtgttattcaatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 7007463  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || |||||  | ||||||||||| ||    
T  7007464 cattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacat 7007563  T
Q  341 gagatttcttgagattgttttt 362  Q
    |||||||||| |||||||||||    
T  7007564 gagatttcttaagattgttttt 7007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 138 - 350
Target Start/End: Complemental strand, 39307472 - 39307260
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||||  |||||||||||||||| ||||||||||       |||||||||||||||     
T  39307472 gttttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcat 39307373  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||| || |||| |||||| |||||  |||||||| ||||||||||||||| ||||| |||||||||| |||||||| | | || ||||    
T  39307372 aatcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaa 39307273  T
Q  338 gatgagatttctt 350  Q
     ||||||||||||    
T  39307272 catgagatttctt 39307260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 38 - 362
Target Start/End: Complemental strand, 30009996 - 30009672
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| ||||||||||||||  |||| |||||       |||| | ||||||||| || ||| ||| ||||||           
T  30009996 gggggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttattgtattcaatcaagactctttccaatttaaaaaaa 30009897  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| |||| |||||| | ||||| |||||| ||||||||| ||  |||||||||||||| | || |||| ||       |||| |||||||||||    
T  30009896 gtcttgtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 30009797  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||| ||||||  || |||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| || ||||||||||||||||||||    
T  30009796 aatcatttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaa 30009697  T
Q  338 gatgagatttcttgagattgttttt 362  Q
     |||||||||||| |||||||||||    
T  30009696 catgagatttcttaagattgttttt 30009672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 141 - 350
Target Start/End: Original strand, 3436583 - 3436792
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| | |||||| ||| |||||| |||||   ||||||||||||| | || |||||||        |||  |||||||||||||    
T  3436583 ttgtgttattcaatcaagattttttgtcgtttaaaaaaaatcttgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaat 3436682  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||    
T  3436683 cattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacat 3436782  T
Q  341 gagatttctt 350  Q
     |||||||||    
T  3436783 aagatttctt 3436792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 175 - 391
Target Start/End: Original strand, 28483923 - 28484127
Alignment:
Q  175 aaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 274  Q
    |||||||||||| |||||||||||||| ||||||||| ||       |||| |||||||||||||||||||||||||||||||||| ||||||||||       
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat--- 28484019  T
Q  275 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 374  Q
           |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||| ||    
T  28484020 -------tggattttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaagacgagatttcttaagattatttttcttttaaaa-tt 28484110  T
Q  375 aatatctttttcttctc 391  Q
    | ||||| |||||||||    
T  28484111 actatctctttcttctc 28484127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 175 - 362
Target Start/End: Original strand, 42786708 - 42786895
Alignment:
Q  175 aaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 274  Q
    |||||||||||  |||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||       
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcat 42786807  T
Q  275 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    ||||||||||||||||||| ||||| ||||| ||||||| ||  ||||||||||||||||||| ||||||||||||  ||||||||||    
T  42786808 attttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 42786895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 36 - 348
Target Start/End: Original strand, 20021229 - 20021531
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||||||||| ||| || |||||||||||||| |||||||||||       |||||||||||| ||| || ||| ||||||||||         
T  20021229 agggggatgtattggattataattttaagggattttaaaagactttttaattatgaaaaagtcttgtggtatttaatcaagactctttgcaatttaaaaa 20021328  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||       ||||  | ||        
T  20021329 aagttttgtggtattcaatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcatcactt-aaaaaagtctcattgt---- 20021423  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac-aagaaaaagtctttcatga 334  Q
          ||||||||||  ||||||||||||||||||| ||||||| |||||||| ||||||||| || || ||||||||| || ||||| ||||||||||    
T  20021424 ------attcaaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatga 20021517  T
Q  335 aaagatgagatttc 348  Q
    | | || |||||||    
T  20021518 agacataagatttc 20021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 43 - 362
Target Start/End: Complemental strand, 31315042 - 31314737
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||||||||| || ||       | |||||||||||||| || ||||||| ||||||       || ||    
T  31315042 tgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtctt 31314943  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| |||| |||||||| |||||||||||| ||||||||||||  ||||||||    || | || |||| ||       |||| ||||||||||||||||    
T  31314942 gtgttatttaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa----gactcttaatcacttaaaaaaagtctagtggtattcaaaatca 31314847  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    |||||||||||||||||||||||||||||  |||||||          ||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  31314846 ttcaaatttcgaaggattgtttaataaatcagattttg----------tgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 31314757  T
Q  343 gatttcttgagattgttttt 362  Q
    ||||||||  ||||||||||    
T  31314756 gatttcttaggattgttttt 31314737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 222 - 362
Target Start/End: Original strand, 41320881 - 41321021
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 321  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| || ||||| |||||||  | ||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaa 41320980  T
Q  322 aagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    ||||||||||| |||| |||||||||||| |||||| ||||    
T  41320981 aagtctttcataaaaacatgagatttcttaagattgatttt 41321021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 147 - 362
Target Start/End: Complemental strand, 46635852 - 46635643
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       || | || |||||||||||||||||    
T  46635852 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattca 46635753  T
Q  247 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 346  Q
    |||||||||||||||||||||||||  ||||      |||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||    
T  46635752 aatttcgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatt 46635659  T
Q  347 tcttgagattgttttt 362  Q
    ||||  ||||||||||    
T  46635658 tcttaggattgttttt 46635643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 141 - 337
Target Start/End: Original strand, 53275829 - 53276025
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| |||||||| |||| | |||||||||| |||||||||||| |||||||||||||||||||| |||| ||       |||| ||| |||| |||||    
T  53275829 ttgtgttattcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaat 53275928  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||| |||||| || |  ||||||| || ||||||||||||||| ||||    
T  53275929 cattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaa 53276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 43 - 362
Target Start/End: Complemental strand, 24131286 - 24130976
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  24131286 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 24131187  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||        
T  24131186 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa---- 24131091  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaag-aaaaagtctttcatgaaaagatg 341  Q
          ||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||  | | ||||| ||||||||||||| |||    
T  24131090 ------tttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacatg 24130997  T
Q  342 agatttcttgagattgttttt 362  Q
    |||||||||  ||||||||||    
T  24130996 agatttcttaggattgttttt 24130976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 141 - 320
Target Start/End: Original strand, 28370914 - 28371093
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||  ||||||||||| | |||| |||| ||       ||||  |||||||||||||    
T  28370914 ttgtggtattcaatcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaat 28371013  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaa 320  Q
    |||||||||||  |||||||||||||||||||| |||||| || ||||||||||||||| ||||| |||||||| |||||    
T  28371014 cattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaattttaagaagaa 28371093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 38 - 315
Target Start/End: Original strand, 23464840 - 23465119
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagatttttta--attatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||||||||| || |||||||||||||||||   || ||       |||||||||||||||| || ||| ||| |||| |         
T  23464840 ggggatgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatataaaaa 23464939  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||  ||||||||||||| || ||||||||| |||||||| ||| | ||||||||||||| | || |||| ||       |||| |||||||||    
T  23464940 aagtcttgtattattcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattc 23465039  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac 315  Q
    |||| |||||||||||||||||||||||||||||||  || ||||||||||||||||||||||| ||||  |||||||||    
T  23465040 aaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagttaaattttaac 23465119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 263 - 371
Target Start/End: Original strand, 8711978 - 8712086
Alignment:
Q  263 ttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgttttt 8712077  T
Q  363 attttaaaa 371  Q
     ||||||||    
T  8712078 cttttaaaa 8712086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 147 - 328
Target Start/End: Original strand, 25446047 - 25446227
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| | |||||||||| |||||| |||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||    
T  25446047 tattcaatcaagatt-tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattca 25446145  T
Q  247 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 328  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||    
T  25446146 aatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 38 - 367
Target Start/End: Complemental strand, 40537464 - 40537150
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| |||||| || |||||||||||||| ||||  || ||       ||||||||||||||||||| ||| |||  |||||           
T  40537464 gggggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaa 40537365  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| |||||||||||||||||||||||||| ||||||||||||  |||||||||||| | | || |||| ||           ||||||||||||    
T  40537364 gtcttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaa-----tgtggtattcaa 40537270  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||| |||||||||| |||||||||||||||  |||||||||||||||||||          ||| ||||||| || ||||||||||||||||||||    
T  40537269 aatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtg----------gtgaaattttagcatgaaaaagtctttcatgaaaa 40537180  T
Q  338 gatgagatttcttgagattgtttttatttt 367  Q
     ||||||||||||  |||| ||||| ||||    
T  40537179 catgagatttcttaggattttttttttttt 40537150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 222 - 327
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 321  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7249801  T
Q  322 aagtct 327  Q
    ||||||    
T  7249800 aagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 263 - 362
Target Start/End: Original strand, 24736447 - 24736546
Alignment:
Q  263 ttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    |||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 37 - 201
Target Start/End: Original strand, 37915671 - 37915835
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||       |||||||||||||||| || |||||||| || ||          
T  37915671 ggggggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgtaacttaaaaaa 37915770  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
     || ||||||||||||||||||||| ||||||| || ||||||||||||  ||||||||||||||    
T  37915771 agtcttgtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaaga 37915835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 97 - 299
Target Start/End: Complemental strand, 25504899 - 25504697
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| ||||  |||||| |||||| |||||   ||||||||    
T  25504899 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaat 25504800  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggat 296  Q
    ||||| | || |||| ||       |||  ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  25504799 caagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggat 25504700  T
Q  297 ttt 299  Q
    |||    
T  25504699 ttt 25504697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 27454208 - 27454073
Alignment:
Q  227 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 326  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||  |||||||||| ||||||||| ||||| ||||| ||||||  || |||||||||    
T  27454208 gtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaagtc 27454109  T
Q  327 tttcatgaaaagatgagatttcttgagattgttttt 362  Q
    ||||||||||| || | |||| || |||||||||||    
T  27454108 tttcatgaaaacataatatttgttaagattgttttt 27454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 228 - 362
Target Start/End: Complemental strand, 56445474 - 56445350
Alignment:
Q  228 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 327  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||          ||||||||| ||||| || |||| |||||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg----------tgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  328 ttcatgaaaagatgagatttcttgagattgttttt 362  Q
    ||||| || | ||||||||||||||||||||||||    
T  56445384 ttcataaagacatgagatttcttgagattgttttt 56445350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 38 - 198
Target Start/End: Original strand, 29855569 - 29855728
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||| |||||||||| |||||||||| |||||||||||||||| ||||||       ||||||| ||||||||||| ||||||||||||||           
T  29855569 ggggatttattggattaggattctatggaattttaaaagatttttaaattatgaaaaagtcttgtgatattcaattaagactttttgcaatttaaaaaaa 29855668  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatca 198  Q
    ||||||| ||||| |||||||||| ||||||||||||||||| | |||| |||||||||||    
T  29855669 gttttgt-gtatttaatcaagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 138 - 350
Target Start/End: Complemental strand, 41582007 - 41581796
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    ||||||| ||| ||| |||||||  |||||||||||||||||||||||  ||||||| | |||| ||||| | | ||       |||| |||||||| |     
T  41582007 gttttgtagtactcagtcaagacattttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggtatttag 41581908  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaag-aaaaagtctttcatgaaa 336  Q
    | |||||||||||| |||  ||||||||||||||||||  |||||  ||||||||||||||| ||||| |||||||||| | ||||| | ||||||| ||    
T  41581907 agtcattcaaattttgaataattgtttaataaattgga--ttgatatattttgtgggattttctagtgaaattttaacatgaaaaaaatatttcatgtaa 41581810  T
Q  337 agatgagatttctt 350  Q
    | ||||||||||||    
T  41581809 acatgagatttctt 41581796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 370
Target Start/End: Complemental strand, 36728023 - 36727937
Alignment:
Q  283 ggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 370  Q
    ||||||||| ||||||| ||||| ||||||||||||||||| ||||||||| | | ||||||||| |||||||||||||| |||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattttttgagattgttttttttttaaa 36727937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 195
Target Start/End: Original strand, 23987141 - 23987300
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||       |||||||||||||||| || ||| ||||  ||||         
T  23987141 agggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaatactctttgtcattttaaaa 23987240  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
      || ||| ||||||||||||| ||| ||  ||| || ||||||||||||  ||||||||    
T  23987241 aagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaa 23987300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 367
Target Start/End: Original strand, 11090435 - 11090520
Alignment:
Q  282 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatttt 367  Q
    |||||||||||||||||| ||||| ||||||| ||  ||||||||||| || |||| ||||||||||||  |||||||||| ||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgtttttctttt 11090520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 56445687 - 56445632
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||||||||||||||||||| ||||||| || ||||||||||| |||||||||||    
T  56445687 ttagggggatgtattggattaagattctaaggaattttaaaagactttttaattat 56445632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 161
Target Start/End: Original strand, 11090273 - 11090401
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||||||||||||| ||||  ||||| | |||||||||||| |||||||||||||       |||||||||||||||| || | | ||||| | ||      
T  11090273 cttagggggatgtatttgattgggattccaagggattttaaaatattttttaattatgagaatgtcttgtggtattcaatcaagaatctttgccacttaa 11090372  T
Q  133 nnnnngttttgtggtattcaatcaagact 161  Q
         ||||||||||||||||||||||||    
T  11090373 aaaaagttttgtggtattcaatcaagact 11090401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 11090339 - 11090408
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatc 210  Q
    ||||||||||||||||||| |||||| || || |||||||| |||  |||||||||||||| ||||||||    
T  11090339 ttgtggtattcaatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcatc 11090408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 37915733 - 37915798
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||||||| ||||| | || ||||||||||||  |||||||||||||| ||||    
T  37915733 ttgtggtattcaatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttt 37915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 467773 - 467821
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||||||||||||||||||||  || |||||||||||||||||||||||    
T  467773 gatgtattggattatgattcttaggaattttaaaagattttttaattat 467821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 24736335 - 24736382
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||||||||||| ||||||| || |||||||||||||||||||||||    
T  24736335 atgtattggattaggattctaaggaattttaaaagattttttaattat 24736382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 28483870 - 28483921
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||||||||||| |||| ||||||||| |||||||||||| |||||||||||    
T  28483870 ggggatgtattgaattaggattctatgagattttaaaagactttttaattat 28483921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 34141685 - 34141634
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||||||||||||||| |||| |||| |||||||||||| |||||||||||    
T  34141685 ggggatgtattggattaagattttatgagattttaaaagactttttaattat 34141634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 46635900 - 46635804
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    |||||||||||||||||||||||||   |||| |||||| ||||| | ||||||||||||||| ||  ||||||       ||||||||||||||||    
T  46635900 ttgtggtattcaatcaagactctttccaatttaaaaaaaatcttgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 46635804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 7007318 - 7007384
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcatttt--aaaaaagtcttgaagtattcaatcaagatt 203  Q
    |||||||||||||||||||||||||||| ||| |||  ||||||||||||   |||||||||||||||    
T  7007318 gttttgtggtattcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaagatt 7007384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 32684261 - 32684108
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtt 140  Q
    ||||||||| |||| |||||||| | |||||||| || |||||||||||       ||||||||||||||||||| | | ||||  ||||       ||     
T  32684261 gatgtattgaattaggattctatagaattttaaaggactttttaattatgaaaaagtcttgtggtattcaattaagattctttgtcattttaaaaaagta 32684162  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
    ||| ||||||||||||||||| ||  ||| |||||||||||||||  ||||||||    
T  32684161 ttgaggtattcaatcaagacttttcatca-tttaaaaaagtcttgtggtattcaa 32684108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 1112841 - 1112937
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    ||||| |||||||||||||||||||   |||| |||||||| ||| | ||||||||||||||| ||  ||||||       ||||||||||||||||    
T  1112841 ttgtgttattcaatcaagactctttccgatttaaaaaaagtattgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 1112937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 6334518 - 6334463
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||| ||||||| |||||||| ||||||| | |||||||||||| |||||||||||    
T  6334518 ttagagggatgtgttggattaggattctaagagattttaaaagaatttttaattat 6334463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 6335468 - 6335413
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||| ||||||| |||||||| ||||||| | |||||||||||| |||||||||||    
T  6335468 ttagagggatgtgttggattaggattctaagagattttaaaagaatttttaattat 6335413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 194
Target Start/End: Complemental strand, 39307469 - 39307374
Alignment:
Q  99 ttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattca 194  Q
    |||||||||||||| || | ||||||| ||||       || ||||||||||||||||||| ||||  |||||| ||||||||||||  |||||||    
T  39307469 ttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattca 39307374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 42786716 - 42786758
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtct 183  Q
    ||||||||||||||||||||||||  |||||| ||||||||||    
T  42786716 ttgtggtattcaatcaagactcttaatcatttaaaaaaagtct 42786758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 7250031 - 7249968
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcatttt--aaaaaagtcttgaagtattcaatcaagatt 203  Q
    ||||||||||||||||||||||||| ||| |||  ||||||||||||   |||||||||||||||    
T  7250031 ttgtggtattcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaagatt 7249968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 36728133 - 36728080
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||| ||| |||||||||| ||||||   ||||||||||||||||||||||||    
T  36728133 aggggaatgaattggattataattctaacagattttaaaagattttttaattat 36728080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 42786654 - 42786699
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||| |||||||||| ||||||||| |||||||||||||| |||||    
T  42786654 gggggtgtattggatcatgattctaagggattttaaaagacttttt 42786699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 264; Significance: 1e-147; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 34 - 392
Target Start/End: Original strand, 6312451 - 6312809
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  6312451 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 6312550  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  6312551 aaaagttttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 6312650  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6312651 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 6312750  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6312751 aaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 6312809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 35 - 392
Target Start/End: Original strand, 25612035 - 25612392
Alignment:
Q  35 tagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnn 134  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||        
T  25612035 tagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaaa 25612134  T
Q  135 nnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtatt 234  Q
       || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||       |||||||||||||    
T  25612135 aaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtatt 25612234  T
Q  235 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 334  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25612235 caaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatga 25612334  T
Q  335 aaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25612335 aaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 25612392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 34 - 391
Target Start/End: Complemental strand, 9322823 - 9322466
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  9322823 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 9322724  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
          ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||       ||| ||||||||    
T  9322723 aaaaaatttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtat 9322624  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9322623 tcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatg 9322524  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  9322523 aaaagatgagatttcttgagattgtttttattttaaaatttactatctttttcttctc 9322466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 38 - 387
Target Start/End: Complemental strand, 29396707 - 29396358
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||||| ||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||           
T  29396707 ggggatgtattggattaggattctatggtattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 29396608  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
     | || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||||    
T  29396607 atcttttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 29396508  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29396507 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 29396408  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttct 387  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  29396407 gatgagatttcttgagattgtttttgttttaaaagttactatctctttct 29396358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 34 - 387
Target Start/End: Complemental strand, 15835376 - 15835023
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  15835376 ttagagggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 15835277  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||        |||||||||||    
T  15835276 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtat 15835177  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15835176 tcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatg 15835077  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttct 387  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  15835076 aaaagatgagatttcttgagattgtttttgttttaaaagttactatctctttct 15835023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 99 - 392
Target Start/End: Original strand, 51701522 - 51701815
Alignment:
Q  99 ttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatca 198  Q
    |||||||||||||| || ||||||||||||||       || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  51701522 ttgtggtattcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatca 51701621  T
Q  199 agatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattt 298  Q
    ||| ||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51701622 agacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattt 51701721  T
Q  299 tgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  51701722 tgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattttttgagattgtttttattttaaaagttactatctttttcttctca 51701815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 32 - 372
Target Start/End: Complemental strand, 48177787 - 48177447
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttn 131  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||  ||||||||||||       |||||||||||||||| || ||||||||||| ||     
T  48177787 tcttaggggaatgtattggattaagattctatgggattttaaaatgttttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaactta 48177688  T
Q  132 nnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggt 231  Q
           | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||       ||||||||||    
T  48177687 aaaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggt 48177588  T
Q  232 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 331  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48177587 attcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 48177488  T
Q  332 tgaaaagatgagatttcttgagattgtttttattttaaaag 372  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  48177487 tgaaaagatgagatttcttgagattgtttttcttttaaaag 48177447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 36 - 391
Target Start/End: Complemental strand, 28387714 - 28387359
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||| |||||||||| |||||||||||||||||||||| |||||||||||       |||| ||||||||||| || ||||||||||||||         
T  28387714 agggggatttattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaa 28387615  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || || |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||        |||||||||||||    
T  28387614 aagtcttttggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattc 28387515  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||    
T  28387514 aaattcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaa 28387415  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  28387414 aagatgagatttcttgagattgtttttgttttaaaagttattatctctttcttctc 28387359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 38 - 391
Target Start/End: Original strand, 46327923 - 46328276
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||||||||||       ||||||| |||||||| || ||||||||||| ||           
T  46327923 ggggatgcattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtgttattcaatcaaaactttttgcaacttaaaaaaa 46328022  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||| |||||||||||    
T  46328023 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaa 46328122  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46328123 aatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaa 46328222  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||| |||||||| || ||||||||| |||||||||||| ||||| |||||||||    
T  46328223 gataagatttctcgaaattgtttttcttttaaaagttactatctctttcttctc 46328276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 34 - 374
Target Start/End: Original strand, 29219165 - 29219493
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       
T  29219165 ttagggggatgtattggattaggattatatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 29219264  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||  |||||||||||||||||||||  ||||||||||||| ||||||||| ||       ||||||||||||    
T  29219265 aaaagtcttgtggtattcaatcaagactct--gtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 29219362  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| |||||||    
T  29219363 tcaaaatcattcaaattaagaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtatttcatg 29219452  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagtt 374  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  29219453 aaaagatgagatttcttgagattgtttttcttttaaaagtt 29219493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 46 - 375
Target Start/End: Original strand, 18798380 - 18798689
Alignment:
Q  46 attggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtg 145  Q
    ||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       || |||||    
T  18798380 attggattaggattctatgagattttaaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtg 18798479  T
Q  146 gtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattc 245  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||||||||||||    
T  18798480 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattc 18798579  T
Q  246 aaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 345  Q
    ||||||||||||||||||||||||||||||                    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18798580 aaatttcgaaggattgtttaataaattgga--------------------ttttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 18798659  T
Q  346 ttcttgagattgtttttattttaaaagtta 375  Q
    |||| |||||||||||| ||||||||||||    
T  18798660 ttctagagattgtttttgttttaaaagtta 18798689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 38536305 - 38536081
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||| | ||       |||||||||||||||||||    
T  38536305 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaat 38536206  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  38536205 tattcaaatttcaaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagat 38536116  T
Q  341 gagatttcttgagattgtttttattttaaaagtta 375  Q
    |||||||||||||||||||||| ||||||||||||    
T  38536115 gagatttcttgagattgtttttcttttaaaagtta 38536081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 38558523 - 38558299
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||| | ||       |||||||||||||||||||    
T  38558523 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaat 38558424  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  38558423 tattcaaatttcaaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagat 38558334  T
Q  341 gagatttcttgagattgtttttattttaaaagtta 375  Q
    |||||||||||||||||||||| ||||||||||||    
T  38558333 gagatttcttgagattgtttttcttttaaaagtta 38558299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 38 - 371
Target Start/End: Complemental strand, 9577751 - 9577418
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||| | |||||||||||||| |||||||| ||       | |||||||||||||| || ||| ||||||| ||           
T  9577751 ggggatgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaagttttgtggtattcaatcaagactatttgcaacttaaaaaaa 9577652  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||| ||||||||||||||| |||||||||||||||||||||||||  |||| |||||| | |||| |||| ||       |||||||| |||||||    
T  9577651 gtattgttgtattcaatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaa 9577552  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||  | |||||| |||||||||||||    
T  9577551 aatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaa 9577452  T
Q  338 gatgagatttcttgagattgtttttattttaaaa 371  Q
     ||||||||||||| |||||||||| ||||||||    
T  9577451 catgagatttcttgggattgtttttcttttaaaa 9577418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 38 - 391
Target Start/End: Original strand, 45272468 - 45272809
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||       | |||||||||||||| || ||||||||||| ||           
T  45272468 ggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaaatattgtggtattcaataaagactttttgcaacttaaaaaaa 45272567  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
     | |||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||||||||| ||        ||| |||||||||||    
T  45272568 atcttgttgtattcaatcaaaactctttgtcattttaaaaa-gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaa 45272666  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||| ||| |||||||||||||| |||||||||||||||          ||||||| |||||||||||||||||||||||||||||| ||||| || ||||    
T  45272667 aattatttaaatttcgaaggat-gtttaataaattgga----------ttttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaa 45272755  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||||| |||||||||||||| |||||||||||| ||||| |||||||||    
T  45272756 gatgagattttttgagattgtttttcttttaaaagttattatctgtttcttctc 45272809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 33 - 279
Target Start/End: Original strand, 49230762 - 49231008
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||       || ||||||||||||| || ||||||||||| ||      
T  49230762 cttagggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaaattaa 49230861  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||    
T  49230862 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 49230961  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 279  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  49230962 ttcaaaatcattcaaatttcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 41 - 346
Target Start/End: Complemental strand, 5495412 - 5495117
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtt 140  Q
    |||||||||||||| ||||||||| |||||||||| | |||||||||||       || ||||||||||||| || ||||||||||| ||       ||     
T  5495412 gatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaacttaaaggaagtc 5495313  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||| ||||||||||||||    
T  5495312 ttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaat 5495213  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||| ||||||| ||||||| ||||||||||          ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  5495212 catttaaatttcaaaggattatttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagat 5495123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 37 - 359
Target Start/End: Original strand, 21222028 - 21222349
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||| |||||||||| ||||||||| |||||||||||||  ||||| || ||       |||||||||||||||| || ||| ||| ||||||          
T  21222028 ggggggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaa 21222127  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     |||| ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| | ||||||||    
T  21222128 agttt-gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattca 21222226  T
Q  237 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 336  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||    
T  21222227 aaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaa 21222326  T
Q  337 agatgagatttcttgagattgtt 359  Q
    | ||||||||||||  |||||||    
T  21222327 acatgagatttcttaggattgtt 21222349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 43 - 350
Target Start/End: Original strand, 35279558 - 35279865
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| | |||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       |  ||    
T  35279558 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagactt 35279657  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||    
T  35279658 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatca 35279757  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    || ||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||| |||| |||||||||||||||||||| ||||    
T  35279758 tttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatga 35279857  T
Q  343 gatttctt 350  Q
    ||||||||    
T  35279858 gatttctt 35279865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 45760331 - 45760004
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| ||||||||| |||||||||||||||||||| || ||       |||||||||||||||| || ||| ||| ||||||         
T  45760331 aggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaaaaa 45760232  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtatt 234  Q
      || ||||| ||||||||||||| ||||||||| ||||||||| ||| ||  |||||||||||||| | || |||| ||       |||| ||||||||    
T  45760231 aagtcttgtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatt 45760132  T
Q  235 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 334  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||| ||| ||||    
T  45760131 caaaatcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatga 45760032  T
Q  335 aaagatgagatttcttgagattgttttt 362  Q
    ||| ||||||||||||  ||||||||||    
T  45760031 aaacatgagatttcttaggattgttttt 45760004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 34 - 360
Target Start/End: Complemental strand, 35679451 - 35679125
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||| || ||||||| || |||||| || |||||||||||||| ||||| || ||       |||||||||||||||| ||  || ||| ||||||       
T  35679451 ttaggagggtgtattgaatcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaaggctcttttcaatttaaa 35679352  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||||||||||||||||| |||||||||||| |||||| ||||| ||||||||||||||| | || |||| ||       ||| ||||||||    
T  35679351 aaaagtcttgtggtattcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtat 35679252  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||  ||||||||| ||||| ||||||| || ||||||||||||||||    
T  35679251 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatg 35679152  T
Q  334 aaaagatgagatttcttgagattgttt 360  Q
    || | |||||||||||| |||||||||    
T  35679151 aagacatgagatttcttaagattgttt 35679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 38 - 362
Target Start/End: Complemental strand, 28824691 - 28824368
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| |||  |||||           
T  28824691 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaa 28824592  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| | |||||||||| ||||||||||||  |||||||||||||| | || |||| ||       ||||||||||||||||    
T  28824591 gtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaa 28824492  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| | |||||||||| |||||||||||| || ||||    
T  28824491 aatcattcaaatttcgaag-attgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaa 28824393  T
Q  338 gatgagatttcttgagattgttttt 362  Q
     ||||||||||||  ||||||||||    
T  28824392 catgagatttcttaggattgttttt 28824368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 97 - 362
Target Start/End: Complemental strand, 19452068 - 19451803
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| |||||||||||| ||||||||||||  ||||| |||    
T  19452068 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaat 19451969  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggat 296  Q
    ||||| | || |||| ||       |||| ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  19451968 caagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggattttgtgggat 19451869  T
Q  297 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    ||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  19451868 tttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgttttt 19451803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 45 - 372
Target Start/End: Complemental strand, 48669084 - 48668770
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||||| |||  ||| |||||||||||||||||||||||||       | ||| |||||| ||| || |  ||||| |||||       |||||||    
T  48669084 tattggattaggatattataggattttaaaagattttttaattatgaaaaggttttgaggtatttaatcaaaaaattttgtaatttaaaaaacgttttgt 48668985  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    | ||||||||||||||||||||||||||||||||||| |||| |||||||||||   |||||||||| ||       |||  |||||||||||||| |||    
T  48668984 gatattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatca---tttttcatcacttaaaaaaagtcacgtggtattcaaaattatt 48668888  T
Q  245 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 344  Q
    ||||||||||| ||||||||||||||||||||||||          ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48668887 caaatttcgaaagattgtttaataaattggattttg----------tgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 48668798  T
Q  345 tttcttgagattgtttttattttaaaag 372  Q
    ||| ||| |||||||||| |||||||||    
T  48668797 tttgttgggattgtttttcttttaaaag 48668770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 33 - 362
Target Start/End: Complemental strand, 50192875 - 50192545
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    ||||||||| ||||||| || ||||||||| || ||||||||||| ||||| |||||       |||||||||||||||| || | | ||| ||||||      
T  50192875 cttaggggggtgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagattctttccaatttaa 50192776  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggt 231  Q
          | ||||| ||||||||||||| || ||||||||||||||||||||||  |||||||||||||| | || |||| ||        |||| |||||    
T  50192775 aaaaaatcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggt 50192676  T
Q  232 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 331  Q
    |||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||    
T  50192675 attcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 50192576  T
Q  332 tgaaaagatgagatttcttgagattgttttt 362  Q
    |||||| ||||||||| ||  ||||||||||    
T  50192575 tgaaaacatgagattttttaggattgttttt 50192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 37014856 - 37014635
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||| |||||||||||||||||  || ||||||||  |||||||||||| ||| ||||||| ||       |||||||| ||||||||||    
T  37014856 ttgtggtattcaattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaat 37014757  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||| || |||||||| |||||||| ||||||||||||||||| ||||||| ||||| ||||||| || |||||||||| |||| |||| ||    
T  37014756 cattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacat 37014657  T
Q  341 gagatttcttgagattgttttt 362  Q
    |||||||||| |||||||||||    
T  37014656 gagatttcttaagattgttttt 37014635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 43 - 362
Target Start/End: Complemental strand, 49198581 - 49198264
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| || ||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  49198581 tgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaa-gtctt 49198483  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| |||||||| |||  ||||||||| |||| | || |||| ||       ||   ||||||||||||||||    
T  49198482 gtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaatca 49198384  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  49198383 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 49198284  T
Q  343 gatttcttgagattgttttt 362  Q
     |||||||  ||||||||||    
T  49198283 tatttcttaggattgttttt 49198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 142 - 362
Target Start/End: Complemental strand, 6304468 - 6304247
Alignment:
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattt-ttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||  |||||||| ||| |  | || |||| ||       |||| ||||||||||||||    
T  6304468 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaat 6304369  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  6304368 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 6304269  T
Q  341 gagatttcttgagattgttttt 362  Q
    || |||||||  ||||||||||    
T  6304268 gaaatttcttatgattgttttt 6304247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 47780695 - 47780916
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| | | |||||||| ||||||||| ||  |||||||||||||| | || |||| ||       |||| ||| ||||||||||    
T  47780695 ttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaat 47780794  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||| ||  ||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||||| |||||||| ||||||||||| ||    
T  47780795 cattcaaaattaaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacat 47780894  T
Q  341 gagatttcttgagattgttttt 362  Q
    |||||||||| |||||||||||    
T  47780895 gagatttcttaagattgttttt 47780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 34 - 347
Target Start/End: Complemental strand, 32589277 - 32588963
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa-tttnn 132  Q
    ||||||||||||||||||||||||||||||| |||||||||| | ||||| || ||       |  ||| ||||||||| || ||| ||| ||| |||      
T  32589277 ttagggggatgtattggattatgattctatgagattttaaaaaacttttttatcatgaaaaagttatgttgtattcaatcaagactcttttcaactttaa 32589178  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
          | || |||||||||||||||||||||| |||||  | || | |||||  | |||||||||||| | ||||||| ||       |||||||||||    
T  32589177 aaaaaatcttctggtattcaatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggta 32589078  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 332  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| ||||| ||||||| ||  ||||||||||||||    
T  32589077 ttcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagtctttcat 32588978  T
Q  333 gaaaagatgagattt 347  Q
    ||||| |||||||||    
T  32588977 gaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 43 - 362
Target Start/End: Complemental strand, 47654668 - 47654346
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngt-t 140  Q
    |||||||||| ||||||||| |||||||||||||| |||||| || ||       ||||||||||||| || || ||| ||| ||||||       || |    
T  47654668 tgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcgatcaagactctttccaatttaaaaaaagtct 47654569  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattcaaaa 239  Q
    ||||| ||||||||||||| |||||||||||| ||| ||||||||  |||||||||||| | | || |||| ||        |||| |||||||||||||    
T  47654568 ttgtgttattcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaa 47654469  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 339  Q
    | ||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||| | ||||||| || |||||||| ||||||||||| |    
T  47654468 ttattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaaca 47654369  T
Q  340 tgagatttcttgagattgttttt 362  Q
    |||||||||||  ||||||||||    
T  47654368 tgagatttcttaggattgttttt 47654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 37 - 242
Target Start/End: Complemental strand, 8141448 - 8141243
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||          
T  8141448 gggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 8141349  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||| ||       |||||| ||||||||    
T  8141348 agttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactattcatcacttaaaaaaagtcttgaggtattca 8141249  T
Q  237 aaatca 242  Q
    ||||||    
T  8141248 aaatca 8141243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 141 - 337
Target Start/End: Original strand, 45535928 - 45536124
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||| | |||||||||||| || ||||| |||  |||||||||||||| | || |||  ||       |||| ||||||||||||||    
T  45535928 ttgtgttattcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaat 45536027  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  45536028 cattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 45536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 45 - 350
Target Start/End: Original strand, 49417972 - 49418277
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||| ||||||||| | |||||||||||| ||||| || ||       || |||| |||||||| || ||| ||| ||||||       || ||||    
T  49417972 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtgatattcaatcaagactctttccaatttagaaaaagtcttgt 49418071  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    | ||||||||||||| || ||||||||| |||||| |  ||  ||||||||| |||| | || |||| ||       |||| ||||||||||||||||||    
T  49418072 gttattcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 49418171  T
Q  245 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 344  Q
    |||||||| ||||||||||||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||| ||||||||||||| ||||||    
T  49418172 caaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgaga 49418271  T
Q  345 tttctt 350  Q
    ||||||    
T  49418272 tttctt 49418277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 37 - 322
Target Start/End: Original strand, 730029 - 730314
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||| |||||||||| ||||||||| |||||||||||||| |||||  | ||       |||||||||||||||| || ||| ||| ||||||          
T  730029 ggggggtgtattggatcatgattctaagggattttaaaagactttttt-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 730127  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattc 235  Q
     || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        |||| |||||||||    
T  730128 agtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattc 730227  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 322  Q
    ||||||||||||||||||| | ||||||||||||||  ||||||||||||||||||| |||||| ||||| ||||||| || |||||    
T  730228 aaaatcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 225 - 350
Target Start/End: Complemental strand, 31572329 - 31572204
Alignment:
Q  225 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaag 324  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||  | |||||||    
T  31572329 ttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaag 31572230  T
Q  325 tctttcatgaaaagatgagatttctt 350  Q
    ||||||||||||  ||||||||||||    
T  31572229 tctttcatgaaatcatgagatttctt 31572204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 99 - 362
Target Start/End: Original strand, 29556046 - 29556310
Alignment:
Q  99 ttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatca 198  Q
    |||||||||||||| || ||| ||| ||||||       || ||||| |||||||| |||| || |||| |||| ||||||||||||   ||||||||||    
T  29556046 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaattaagattcattgttatttaaaaaaagtcttgtgttattcaatca 29556145  T
Q  199 agatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattt 298  Q
    ||| | || |||| ||        ||| ||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||    
T  29556146 agactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatggattttatgggattt 29556245  T
Q  299 tgtagtgtaattttaacaagaaaaagtctttcatgaaa-agatgagatttcttgagattgttttt 362  Q
    | || || ||||||| |  |||||||||||| |||||| | ||||||||||||  ||||||||||    
T  29556246 tctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagatttcttaggattgttttt 29556310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 328
Target Start/End: Original strand, 48524303 - 48524490
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| | |||||||||| |||||| || ||  ||||| |||||| | | || |||| ||       |||||||| ||||||||||    
T  48524303 ttgtgttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaat 48524402  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 328  Q
    ||||||||||| ||| |||||||||||||||  | |||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  48524403 cattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 22183249 - 22183457
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| |||||||||  ||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||         
T  22183249 aggggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaa 22183348  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      |||||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||||||    
T  22183349 aagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattc 22183448  T
Q  236 aaaatcatt 244  Q
    |||||||||    
T  22183449 aaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 37 - 350
Target Start/End: Original strand, 33025392 - 33025696
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||| |||||||||| ||||||||| | || ||||||||| ||||| || ||       |||||||||||||||| || |  |||| ||||||          
T  33025392 ggggggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaaaaaattttccaatttaaaaaa 33025491  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattt-ttcatcatttnnnnnnngtcttgtggtattc 235  Q
     |||||||  ||||||||||||| |||||| |||||| ||||| |||||  |||||||||||| |  | || |||| ||       ||||||||||||||    
T  33025492 agttttgtcttattcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattc 33025591  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    |||||||||||||||| |||||||||||||||| ||            |||||||||||||||| || |  ||||||| || ||||||||||||||||||    
T  33025592 aaaatcattcaaattttgaaggattgtttaatacat----------cagattttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaa 33025681  T
Q  336 aagatgagatttctt 350  Q
    || ||||||||||||    
T  33025682 aacatgagatttctt 33025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 953700 - 953863
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  953700 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 953799  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||| |||||||    
T  953800 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaaga 953863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 42290723 - 42290813
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgca 126  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||       |||||||||||||||| || ||||||||||    
T  42290723 agggggatttattggattaagattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgca 42290813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 222 - 314
Target Start/End: Original strand, 51085860 - 51085952
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaa 314  Q
    |||| |||||||||||||| |||||||||| |||||||| || ||||||||||||||||||| ||||||||| ||||| | ||| ||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaattttaa 51085952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 280
Target Start/End: Original strand, 47784371 - 47784509
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||||| ||||  | || ||||||||||||  |||||||||||||| | ||  ||||||       |||||||||||||||||||    
T  47784371 ttgtgatattcaatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaa-gtcttgtggtattcaaaat 47784469  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttg 280  Q
     ||||||| ||| || ||||||||||||||||||||||||    
T  47784470 tattcaaacttctaaagattgtttaataaattggattttg 47784509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 37 - 203
Target Start/End: Complemental strand, 19452170 - 19452004
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||| |||||||||| ||||||||| |||||||||||||| ||||| ||  |       |||||||||||||||| || ||| ||| ||||||          
T  19452170 ggggggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 19452071  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
     || |||||||||||||||||||||||||   |||| ||||||||||||   |||||||||||||||    
T  19452070 agtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 19452004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 230 - 289
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  230 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 289  Q
    |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 31622591 - 31622536
Alignment:
Q  225 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 280  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  31622591 ttgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 349
Target Start/End: Original strand, 38319996 - 38320098
Alignment:
Q  247 aatttcgaaggattgtttaataaattggattttgatggattttgt-gggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 345  Q
    ||||| ||| ||||||||| ||||| |||||||||| |||||||| ||| |||| ||||| ||||||| ||  ||||||||||||||||||| |||| ||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtg-aattttagcacaaaaaagtctttcatgaaaatatgatat 38320094  T
Q  346 ttct 349  Q
    ||||    
T  38320095 ttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 14494091 - 14494237
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| ||||||||| |||   |||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||         
T  14494091 aggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaa 14494187  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttg 185  Q
      || ||||| ||||||||||||| |||||||||||| ||||||||||||    
T  14494188 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttg 14494237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 161
Target Start/End: Complemental strand, 38536366 - 38536243
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||||||| |||| |||| ||||||||||||||||| |||||| ||||       |||||||||||||||| || ||| ||||  ||||           
T  38536366 ggggatgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 38536267  T
Q  138 gttttgtggtattcaatcaagact 161  Q
    |||||| |||||||||||||||||    
T  38536266 gttttgaggtattcaatcaagact 38536243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 161
Target Start/End: Complemental strand, 38558584 - 38558461
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||||||| |||| |||| ||||||||||||||||| |||||| ||||       |||||||||||||||| || ||| ||||  ||||           
T  38558584 ggggatgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaa 38558485  T
Q  138 gttttgtggtattcaatcaagact 161  Q
    |||||| |||||||||||||||||    
T  38558484 gttttgaggtattcaatcaagact 38558461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 51701519 - 51701582
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    |||||||||||||||||||||||| ||||  |||| |||| |||||||  ||||||||||||||    
T  51701519 gttttgtggtattcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaaga 51701582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 953761 - 953823
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    |||||||||||||||||||||||||   |||| ||||||||||||   |||||||||||||||    
T  953761 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 953823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 14494151 - 14494213
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    |||||||||||||||||||||||||   |||| ||||||||||||   |||||||||||||||    
T  14494151 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 14494213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 43885203 - 43885157
Alignment:
Q  244 tcaaatttcgaaggattgtttaataaattggattttgatggattttg 290  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||    
T  43885203 tcaaattttgaatgattatttaataaattggattttgatggattttg 43885157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 29556043 - 29556108
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    ||||||||||||||||||||||||||||   |||| ||||||||||||   |||||||| ||||||    
T  29556043 gttttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaattaagatt 29556108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 48524266 - 48524326
Alignment:
Q  146 gtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||||||   |||| ||||||||||||   ||||||||||||||||||    
T  48524266 gtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 48524326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 179
Target Start/End: Complemental strand, 25831117 - 25831084
Alignment:
Q  146 gtattcaatcaagactctttgtcattttaaaaaa 179  Q
    ||||||||||||| ||||||||||||||||||||    
T  25831117 gtattcaatcaaggctctttgtcattttaaaaaa 25831084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 28541385 - 28541430
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||| |||||||||| ||||||||| | ||||||||||||||||||    
T  28541385 gggggtgtattggatcatgattctaagcgattttaaaagatttttt 28541430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 25831224 - 25831139
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttg 124  Q
    |||||| ||| ||| ||||||||| || ||||||||||| |||||||||||       |||| || ||||||||||| ||||||||    
T  25831224 gggatgcattcgatcatgattctaaggaattttaaaagactttttaattatgaaaaaatcttttgatattcaattaagactttttg 25831139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 45535884 - 45535944
Alignment:
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaa 199  Q
    ||||||| |||||||||||||||||||   |||| ||||||||||||   |||||||||||    
T  45535884 ttttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaa 45535944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 33 - 392
Target Start/End: Complemental strand, 14782458 - 14782099
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||      
T  14782458 cttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaa 14782359  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       |||||||||||    
T  14782358 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 14782259  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 332  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14782258 ttcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 14782159  T
Q  333 gaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14782158 gaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 14782099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 34 - 392
Target Start/End: Complemental strand, 44726132 - 44725774
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  44726132 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 44726033  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  44726032 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 44725933  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44725932 tcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 44725833  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44725832 aaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 44725774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 36 - 375
Target Start/End: Complemental strand, 18959047 - 18958708
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||| ||||||||| || ||||||||||||||         
T  18959047 agggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtagtattcaatcaagactttttgcaatttaaaaa 18958948  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||    
T  18958947 aagtcttgtggtattcaatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 18958848  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18958847 aaaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 18958748  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagtta 375  Q
    ||||| |||||| |||||||||||||| ||||||||||||    
T  18958747 aagattagattttttgagattgtttttgttttaaaagtta 18958708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 36 - 381
Target Start/End: Complemental strand, 19718201 - 19717856
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||| |||||||||||||| ||||||||||||||||||||||  ||||||||||       || || |||||||||| || ||||||||||||||         
T  19718201 agggagatgtattggattaggattctatgggattttaaaagaccttttaattatgaaaaagtcctgcggtattcaatcaagactttttgcaatttaaaaa 19718102  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||    
T  19718101 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattc 19718002  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19718001 aaaatcattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaa 19717902  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagttaatatct 381  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||    
T  19717901 aagatgagatttcttgagattgtttttgttttaaaagttactatct 19717856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 45 - 391
Target Start/End: Complemental strand, 39467778 - 39467433
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||| ||| ||       || ||||    
T  39467778 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaa-gtcttgt 39467680  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       |||||||||||||||||||||||    
T  39467679 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatt 39467580  T
Q  245 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 344  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39467579 caaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 39467480  T
Q  345 tttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||| |||||||||||||| |||||||||||| ||||| |||||||||    
T  39467479 ttttttgagattgtttttcttttaaaagttactatctctttcttctc 39467433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 34 - 391
Target Start/End: Complemental strand, 10295703 - 10295344
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||| |||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       
T  10295703 ttagggagatgtattggattaggattctatgggattttaaaagagtttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaag 10295604  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || || ||| ||||||||||||||||| |||| || ||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||    
T  10295603 aaaagtcttctggcattcaatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 10295504  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt-gtgggattttgtagtgtaattttaacaagaaaaagtctttcat 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10295503 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 10295404  T
Q  333 gaaaagatgagatttcttgagattgt-ttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||||||||||||||||||||| |||| |||||||||||||| ||  |||||||||    
T  10295403 gaaaagatgagatttcttgagattgtttttttttttaaaagttaatgtcactttcttctc 10295344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 36 - 375
Target Start/End: Complemental strand, 9288770 - 9288438
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||       |||||||||        || ||||||||||||||         
T  9288770 agggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtc-------aagactttttgcaatttaaaaa 9288678  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||       ||||||||||||||    
T  9288677 aagtcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattc 9288578  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9288577 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 9288478  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagtta 375  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  9288477 aagatgagatttcttgagattgtttttcttttaaaagtta 9288438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 38 - 392
Target Start/End: Complemental strand, 18306279 - 18305935
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||||||| |||| |||||||||| |||||| ||||||||||||||||       |||||||||||||||| || ||||||||||| ||           
T  18306279 ggggatgtattgaattaggattctatggaattttagaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 18306180  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||||    
T  18306179 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 18306080  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18306079 aatcattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 18305990  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||| || |||||||||||| ||||| ||||||||||    
T  18305989 gatgagatttcttgagattgttattcttttaaaagttactatctctttcttctca 18305935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 36 - 375
Target Start/End: Original strand, 4402993 - 4403332
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||||| |       |||| ||||||||||| || ||||||||||| ||         
T  4402993 agggggatgtattggattatgattatatgagattttaaaagactttttaattgtgaaaaagtcttttggtattcaatcaaaactttttgcaacttaaaaa 4403092  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||| ||        ||| |||||||||    
T  4403093 aagtcttgtggtattcaatcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattc 4403192  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4403193 aaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaa 4403292  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagtta 375  Q
    || ||||||||||||| |||||||||| ||||||||||||    
T  4403293 aatatgagatttcttgggattgtttttcttttaaaagtta 4403332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 38 - 391
Target Start/End: Original strand, 7466223 - 7466566
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||       |||||||||||||||| || ||||||||||| ||           
T  7466223 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 7466322  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||  ||       ||||||||||||||||    
T  7466323 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaa 7466422  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||| |||| ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7466423 aatcattcaaattttgaagaattgtttaataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 7466512  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||||||||| ||||||||||||  |||| |||||||||    
T  7466513 gatgagatttcttgagattgtttttcttttaaaagttacgatctctttcttctc 7466566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 39 - 391
Target Start/End: Original strand, 26855957 - 26856308
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnng 138  Q
    |||||||||||||||| ||||||||| |||||||||||| |||  ||||||       | |||||||||||||| || ||||||||||| ||            
T  26855957 gggatgtattggattaggattctatgagattttaaaagacttt--aattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaa 26856054  T
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtctt-gaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    | |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| ||       ||||||||||||||||    
T  26856055 tattgtggtattcaatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 26856154  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  26856155 aatcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaa 26856254  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
     || ||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  26856255 aataagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 26856308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 36 - 375
Target Start/End: Complemental strand, 42306105 - 42305776
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||       ||||||| |||||||| || | ||||||||||||         
T  42306105 agggggatgtattggattaggattctatgtgattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaagaatttttgcaatttaaaaa 42306006  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||        |||||||||||||    
T  42306005 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattc 42305906  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| ||          |||||||||||||||||||||||||||||||||| ||||||||    
T  42305905 aaaataattcaaatttcgaaggattgtttaatcaattggattttaat----------ggattttgtagtgtaattttaacaagaaaaagtcattcatgaa 42305816  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagtta 375  Q
    || |||||||||||||||||||||||| |||| |||||||    
T  42305815 aaaatgagatttcttgagattgtttttgtttttaaagtta 42305776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 141 - 391
Target Start/End: Complemental strand, 43166905 - 43166655
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||| ||||  |||| ||||||||||||  |||||||||||||| | ||  ||||||       |||||||||||||||||||    
T  43166905 ttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaat 43166806  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  43166805 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagat 43166706  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||| |||| |||||||||||| ||||| |||| ||||    
T  43166705 gagatttcttgagattggttttcttttaaaagttactatctctttcctctc 43166655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 38 - 375
Target Start/End: Original strand, 16362084 - 16362411
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||||||||       | |||||||||||||| || |||||||| || ||           
T  16362084 ggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgtaacttaaaaaaa 16362183  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
     | ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||       |||| |||||||||||    
T  16362184 atcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaa 16362283  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||| ||||| || ||||    
T  16362284 aatcattcaaatttcgaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaaatcttttataaaaa 16362373  T
Q  338 gatgagatttcttgagattgtttttattttaaaagtta 375  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  16362374 gatgagatttcttgagattgtttttcttttaaaagtta 16362411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 97 - 375
Target Start/End: Original strand, 32497472 - 32497740
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||||||||||| ||        | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  32497472 tcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaat 32497571  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggat 296  Q
    ||||| ||||||||| ||       |||||||||||||||||||||||||||||||||| |||||||||||||||          |||||||||||||||    
T  32497572 caagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggat 32497661  T
Q  297 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtta 375  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32497662 tttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtta 32497740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 38 - 375
Target Start/End: Original strand, 31623583 - 31623900
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||       |||||||| ||||||| || |||||||| || ||           
T  31623583 ggggatgtattggattaggattctatggaattttaaaagattttttaattatgaaaaagtcttgtggcattcaatcaagactttttgtaacttaaaaaaa 31623682  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||    
T  31623683 gtctcttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 31623782  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||||||||||||| |||||||||||    
T  31623783 aatcattcaaatttcgaaggattgtttaataaattgga--------------------ttttgtagtgtaattttaacaagaaaaagtttttcatgaaaa 31623862  T
Q  338 gatgagatttcttgagattgtttttattttaaaagtta 375  Q
    ||| ||||||||||||||||||||| ||||||||||||    
T  31623863 gataagatttcttgagattgtttttcttttaaaagtta 31623900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 36 - 280
Target Start/End: Complemental strand, 4031578 - 4031334
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||       ||||||||||||| || || ||||||||||||||         
T  4031578 agggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagactttttgcaatttaaaaa 4031479  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| | ||       ||||||||||||||    
T  4031478 aagtcttgtggtattcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattc 4031379  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttg 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  4031378 aaaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 35 - 362
Target Start/End: Complemental strand, 26374749 - 26374424
Alignment:
Q  35 tagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnn 134  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||| || ||       ||||||| |||||||| || ||| ||| ||||||        
T  26374749 tagggggatgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaa 26374650  T
Q  135 nnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtatt 234  Q
       ||| |||  ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||    
T  26374649 aaagttgtgt--tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatt 26374552  T
Q  235 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 334  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||    
T  26374551 caaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 26374452  T
Q  335 aaagatgagatttcttgagattgttttt 362  Q
    ||| ||||||||||||  ||||||||||    
T  26374451 aaacatgagatttcttaggattgttttt 26374424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 33 - 362
Target Start/End: Complemental strand, 5576943 - 5576614
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||  | ||       |||||||||||||||| || ||| ||| ||||||      
T  5576943 cttaggggg-tgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgtggtattcaatcaagactctttccaatttaa 5576845  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggt 231  Q
         || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        |||  |||||    
T  5576844 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggt 5576745  T
Q  232 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 331  Q
    ||||||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||| |    
T  5576744 attcaaaatcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttta 5576645  T
Q  332 tgaaaagatgagatttcttgagattgttttt 362  Q
    |||||| ||||||||||||  ||||||||||    
T  5576644 tgaaaacatgagatttcttaggattgttttt 5576614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 37 - 362
Target Start/End: Complemental strand, 2705138 - 2704813
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||| |||||||||| |||||| ||  ||||||||||||||||||| || ||       |||||||||||||||| || ||| ||| ||| ||          
T  2705138 ggggggtgtattggatcatgattgtaaaggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaaattaaaaaa 2705039  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||    
T  2705038 agtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattca 2704939  T
Q  237 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 336  Q
    ||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||| |||||  |||||| || |||||||||||||||||||    
T  2704938 aaatcattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaa 2704839  T
Q  337 agatgagatttcttgagattgttttt 362  Q
    | ||||||||||||  ||||||||||    
T  2704838 acatgagatttcttaggattgttttt 2704813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 45 - 362
Target Start/End: Complemental strand, 42938428 - 42938111
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    ||||||||||| ||| || |||||||||||||| ||||| |  ||       |||||||||||||||| || ||| ||| ||||||       || ||||    
T  42938428 tattggattataattttaagggattttaaaagacttttttaccatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgt 42938329  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    | ||||||||||||| | |||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||    
T  42938328 gttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 42938229  T
Q  245 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 344  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| |  |||||||||||||||||||| ||||||    
T  42938228 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgaga 42938129  T
Q  345 tttcttgagattgttttt 362  Q
    ||||||  ||||||||||    
T  42938128 tttcttaggattgttttt 42938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 24502028 - 24501807
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| ||||| |||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||    
T  24502028 ttgtgttattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 24501929  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  24501928 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 24501829  T
Q  341 gagatttcttgagattgttttt 362  Q
    ||||||||||  ||||||||||    
T  24501828 gagatttcttaggattgttttt 24501807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 42735597 - 42735271
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||         
T  42735597 aggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaa 42735498  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||| ||||||||||||| ||||| |||||| ||||||| ||||  ||||||||| |||| | || |||| ||       |||| |||||||||    
T  42735497 aagtcttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattc 42735398  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| |  ||||||||||||||| ||    
T  42735397 aaaatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaa 42735298  T
Q  336 aagatgagatttcttgagattgttttt 362  Q
    || ||||||||||||  ||||||||||    
T  42735297 aacatgagatttcttaggattgttttt 42735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 38 - 362
Target Start/End: Complemental strand, 23115486 - 23115163
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  23115486 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 23115387  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||| ||||||  |||||||||||||| | || |||| ||       |||| |||||||||||    
T  23115386 gtcttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 23115287  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    | |||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| || || ||||||  || ||||||||||||||||||||    
T  23115286 a-tcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaa 23115188  T
Q  338 gatgagatttcttgagattgttttt 362  Q
     |||||||| |||  ||||||||||    
T  23115187 catgagattccttaggattgttttt 23115163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 43 - 362
Target Start/End: Complemental strand, 7507212 - 7506893
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||         |||    
T  7507212 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaagttt 7507113  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||| ||| || ||||||||| | ||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||| ||    
T  7507112 gtgttattcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaacca 7507013  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||| ||| ||||    
T  7507012 ttcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatga 7506913  T
Q  343 gatttcttgagattgttttt 362  Q
    ||||||||  ||||||||||    
T  7506912 gatttcttaggattgttttt 7506893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 147 - 347
Target Start/End: Complemental strand, 10392446 - 10392246
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| ||||||||||||||||||| |||||   ||||||||||||| |||| |||| ||       |||| |||||||||| |||||||||    
T  10392446 tattcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattca 10392347  T
Q  247 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 346  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||    
T  10392346 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatt 10392247  T
Q  347 t 347  Q
    |    
T  10392246 t 10392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 42937344 - 42937563
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| | |||||||||| ||||||||||||  ||||||||||  || | || |||| ||       |||| ||||||||||||||    
T  42937344 ttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaat 42937441  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||  ||||||||||||||||||| ||    
T  42937442 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacat 42937541  T
Q  341 gagatttcttgagattgttttt 362  Q
    ||||||||||  ||||||||||    
T  42937542 gagatttcttatgattgttttt 42937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 175 - 375
Target Start/End: Original strand, 37857144 - 37857334
Alignment:
Q  175 aaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 274  Q
    ||||||| |||| ||||||||| |||||||||||||| ||       ||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgg 37857243  T
Q  275 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 374  Q
    ||||||||||||          ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37857244 attttgatggat----------tttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtt 37857333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 139 - 374
Target Start/End: Complemental strand, 39190030 - 39189798
Alignment:
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaa 238  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||  ||||||||| || | | || |||||||       ||||  || |||||||     
T  39190030 ttttgtggtattcaatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaac 39189932  T
Q  239 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 338  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||  | ||||| ||||  ||||||||||||||||| |||||||||||||     
T  39189931 atcattcaaatttcgaaggattgtttaataaattgaattt-gatggattttgatgaattttctagta-aattttaacaagaaaaaatctttcatgaaaac 39189834  T
Q  339 atgagatttcttgagattgtttttattttaaaagtt 374  Q
    ||||||||||||| |||||||||| |||||||||||    
T  39189833 atgagatttcttgggattgtttttcttttaaaagtt 39189798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 43 - 362
Target Start/End: Original strand, 41478990 - 41479299
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       |||||    
T  41478990 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtttt 41479089  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       ||||  |||||||||||||||    
T  41479090 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatca 41479189  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    ||||||||||||| |||||||||||||||            |||||||||||||||| ||||  ||||||| || |||||| ||||||||||||| ||||    
T  41479190 ttcaaatttcgaatgattgtttaataaat----------cagattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatga 41479279  T
Q  343 gatttcttgagattgttttt 362  Q
    ||||||||  ||||||||||    
T  41479280 gatttcttaggattgttttt 41479299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 97 - 362
Target Start/End: Original strand, 43959605 - 43959859
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  43959605 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcattttaaaaaagtcttgt-gtattcaat 43959703  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggat 296  Q
    ||||||| || |||| ||       | || ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||        
T  43959704 caagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtg---- 43959799  T
Q  297 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
          ||| ||||||| || |||||||||||| || |||| ||||||||||||  ||||||||||    
T  43959800 ------gtgaaattttagcatgaaaaagtctttaattaaaacatgagatttcttatgattgttttt 43959859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 43166962 - 43166809
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttt 141  Q
    ||||||||||||| |||| ||||||||||||||| | ||||||||||        |||||||||||||||| || ||||||||||||||       || |    
T  43166962 atgtattggattaagattttatgggattttaaaatactttttaattaagaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtct 43166863  T
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  43166862 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaa 43166809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 43 - 280
Target Start/End: Complemental strand, 32711595 - 32711358
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| | || ||||||||| ||||| || ||       | |||||||||||||| || ||| ||| ||||||       || ||    
T  32711595 tgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 32711496  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||    
T  32711495 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 32711396  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttg 280  Q
    || ||||||||||||||||||||||||||  |||||||    
T  32711395 tttaaatttcgaaggattgtttaataaatcagattttg 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 222 - 362
Target Start/End: Complemental strand, 4950150 - 4950010
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 321  Q
    |||||| ||||||||||||||||||| |||| || |||| ||||||||||| |||||||||||| ||||||| ||||| ||||| ||||||| || ||||    
T  4950150 gtcttggggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaa 4950051  T
Q  322 aagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    || | ||||||| ||| || ||||||||| | |||||||||    
T  4950050 aaatatttcatgcaaacataagatttcttaaaattgttttt 4950010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 228 - 299
Target Start/End: Complemental strand, 8410526 - 8410455
Alignment:
Q  228 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 299  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggatttt 8410455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 222 - 337
Target Start/End: Complemental strand, 13478384 - 13478269
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 321  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||||| ||||| | |||||||||| ||||||| |||   ||||||| || || |    
T  13478384 gtcttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgata 13478285  T
Q  322 aagtctttcatgaaaa 337  Q
    |||||||| |||||||    
T  13478284 aagtcttttatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 40 - 199
Target Start/End: Original strand, 32497373 - 32497532
Alignment:
Q  40 ggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngt 139  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||| ||       |||||||||||||||| || ||||||| ||| ||       ||    
T  32497373 ggatgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagt 32497472  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaa 199  Q
     ||||||||||||||||||||| ||||  | || |||||| |||||  ||||||||||||    
T  32497473 cttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaa 32497532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 183
Target Start/End: Complemental strand, 39190085 - 39189944
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttt 141  Q
    ||||||||||||| ||||||| |||||||||||||| |||||||||||       | |||||||||||||| || ||| ||||||||||       || |    
T  39190085 atgtattggattaggattctaagggattttaaaagactttttaattatgaattttttttgtggtattcaatcaagactctttgcaatttaaaaaaagtct 39189986  T
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtct 183  Q
    ||||||||||||| || ||||||| |||||| ||||||||||    
T  39189985 tgtggtattcaataaaaactctttatcatttaaaaaaagtct 39189944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 4031341 - 4031294
Alignment:
Q  293 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4031341 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 43308593 - 43308546
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  43308593 atgtattggattaggattctatggaattttaaaagactttttaattat 43308546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 199
Target Start/End: Complemental strand, 29930904 - 29930843
Alignment:
Q  139 ttttgtggtattcaatcaagactctttgtcattt-taaaaaagtcttgaagtattcaatcaa 199  Q
    ||||||||||||||||||||| | |||||||||| ||||||| ||||| | |||||||||||    
T  29930904 ttttgtggtattcaatcaagattatttgtcatttataaaaaaatcttgtattattcaatcaa 29930843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 9770545 - 9770497
Alignment:
Q  231 tattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 279  Q
    |||||||||| ||||||||||| ||| ||| ||||||||||||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggatttt 9770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 279
Target Start/End: Original strand, 41070018 - 41070074
Alignment:
Q  223 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 279  Q
    |||||||||||| |||||||||| |||||| || |||||||| |||||||| |||||    
T  41070018 tcttgtggtatttaaaatcattccaatttcaaatgattgtttgataaattgaatttt 41070074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 8543402 - 8543452
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||| |||| |||||| ||| ||||||||| ||||||||||||||||||||    
T  8543402 cttaagggggtgtattagatcatgattctaagggattttaaaagatttttt 8543452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 24502094 - 24502044
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    ||||||||| |||||||||| |||||||||  ||||||||||||| |||||    
T  24502094 cttaggggggtgtattggatcatgattctaaaggattttaaaagacttttt 24502044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 37857092 - 37857142
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||| ||||||||||  ||| || ||||||||||||||||||||||||||    
T  37857092 gggatatattggattagaattttacgggattttaaaagattttttaattat 37857142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 9771035 - 9770962
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatca 211  Q
    |||||||  ||||||||||||| ||||| |||||| |||||||||  |  |||||||||||||| |||| ||||    
T  9771035 gttttgttttattcaatcaagaatctttctcatttaaaaaaagtcacgttgtattcaatcaagactttttatca 9770962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 32497432 - 32497497
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||||||| |||   | || ||||||||||||  |||||||||||||| ||||    
T  32497432 ttgtggtattcaatcaagactttttacaacttaaaaaaagtcttgtggtattcaatcaagactttt 32497497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 9771137 - 9771089
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttt 82  Q
    |||| |||||||||||||||| |||| || |||||||||||| ||||||    
T  9771137 ttagagggatgtattggattaagattttaagggattttaaaatattttt 9771089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 34 - 392
Target Start/End: Complemental strand, 36674453 - 36674095
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  36674453 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 36674354  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  36674353 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 36674254  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36674253 tcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 36674154  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36674153 aaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 36674095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 36 - 391
Target Start/End: Complemental strand, 44906834 - 44906479
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||| |||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||         
T  44906834 agggggatatattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 44906735  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||    
T  44906734 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 44906635  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44906634 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaa 44906535  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  44906534 aagatgagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 44906479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 37 - 375
Target Start/End: Original strand, 11431412 - 11431750
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    |||||||||||||||||| ||||||||  |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||          
T  11431412 gggggatgtattggattaggattctataagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 11431511  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       |||||||||||||||    
T  11431512 agtcttgtggtattcaataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 11431611  T
Q  237 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 336  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11431612 aaatcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 11431711  T
Q  337 agatgagatttcttgagattgtttttattttaaaagtta 375  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11431712 agatgagatttcttgagattgtttttattttaaaagtta 11431750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 36 - 392
Target Start/End: Complemental strand, 31646605 - 31646251
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||| |||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||         
T  31646605 agggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 31646506  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || || |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||        |||||||||||||    
T  31646505 aagtcttatggtattcaatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattc 31646406  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31646405 aaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 31646306  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |  ||||||||||||||||||||| || |||||||||||| || || ||||||||||    
T  31646305 a--atgagatttcttgagattgttattcttttaaaagttactacctctttcttctca 31646251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 141 - 392
Target Start/End: Complemental strand, 34484246 - 34483995
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       || ||||||||||||||||    
T  34484246 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaat 34484147  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34484146 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagat 34484047  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  34484046 gagatttcttgagattgtttttgttttaaaagttactatctctttcttctca 34483995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 36 - 391
Target Start/End: Original strand, 26107146 - 26107501
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||       ||||||  |||||||| || ||||||||||| ||         
T  26107146 agggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtaatattcaatcaagactttttgcaacttaaaaa 26107245  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
        || || ||| |||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||    
T  26107246 agtcttagtcgtactcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattc 26107345  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||    
T  26107346 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaa 26107445  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||||||||||| |||||||||||| | ||| |||||||||    
T  26107446 aagatgagatttcttgagattgtttttcttttaaaagttactttctctttcttctc 26107501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 48 - 392
Target Start/End: Original strand, 54628740 - 54629085
Alignment:
Q  48 tggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggt 147  Q
    ||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       || |||||||    
T  54628740 tggattaggattctatgagattttaaaagactttttaattatgaaaacgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggt 54628839  T
Q  148 attcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnng-tcttgtggtattcaaaatcattca 246  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||            ||||||||||||||||||||||||    
T  54628840 attcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattca 54628939  T
Q  247 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 346  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  54628940 aatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatt 54629039  T
Q  347 tcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||| |||| ||||||| ||||| ||||||||||    
T  54629040 tcttgagattgtttttcttttgaaagttactatctctttcttctca 54629085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 33 - 391
Target Start/End: Complemental strand, 52618289 - 52617937
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||       ||||||||||||| || || | |||||| || ||      
T  52618289 cttagggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagattttttgtaacttaa 52618190  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         ||  |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||    
T  52618189 aaaaagtcatgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 52618090  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||    
T  52618089 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac------aagtctttcat 52617996  T
Q  333 gaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
     ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  52617995 aaaaagatgagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 52617937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 38 - 367
Target Start/End: Original strand, 40897030 - 40897360
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnn-tcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||||||||||||||| |||||||||||||||||||| | |||||||||||        |||||||||||||||| || | ||||||||| ||          
T  40897030 ggggatgtattggattaggattctatgggattttaaaacactttttaattatgaaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaaa 40897129  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||| |||||||||    
T  40897130 agtcttgtggtattcattcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattca 40897229  T
Q  237 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40897230 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaa 40897329  T
Q  337 agatgagatttcttgagattgtttttatttt 367  Q
    |||||||||||||||| ||||||||| ||||    
T  40897330 agatgagatttcttgatattgtttttctttt 40897360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 34 - 391
Target Start/End: Original strand, 48379041 - 48379397
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||       ||| |||||||||||| || | ||||||||| ||       
T  48379041 ttagggagatgtattggattatgattctataggattttaaaagactttttaattatcaaaaagtctcgtggtattcaatcaaaattttttgcaacttaaa 48379140  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
         | ||||| | |||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| ||       ||||||||||||    
T  48379141 aaaaatcttgtgat-ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtat 48379239  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  48379240 tcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatg 48379339  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||| ||||||||||||||||||||| ||||||| |||| ||||| |||||||||    
T  48379340 aaaagatcagatttcttgagattgtttttcttttaaatgttactatctctttcttctc 48379397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 140 - 390
Target Start/End: Original strand, 32580166 - 32580415
Alignment:
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||       ||||||||||||||||||    
T  32580166 tttgtggtattcgatcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaa 32580264  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32580265 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 32580364  T
Q  340 tgagatttcttgagattgtttttattttaaaagttaatatctttttcttct 390  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  32580365 tgagatttcttgagattgtttttattttaaaaattactatctttttcttct 32580415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 141 - 391
Target Start/End: Original strand, 17946278 - 17946528
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||| ||| ||||||||||    
T  17946278 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaat 17946377  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17946378 cattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 17946477  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  17946478 gagatttcttgagattgtttttcttttaaaagttactatctatttcttctc 17946528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 38 - 391
Target Start/End: Complemental strand, 51738044 - 51737693
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||  || |||||| |||| ||           
T  51738044 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaa--aagacttttagcaacttaaaaaaa 51737947  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
    || ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||| ||       |||||||||||||||    
T  51737946 gtcttgtggtattcaatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 51737847  T
Q  237 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||    
T  51737846 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaa 51737747  T
Q  337 agatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||| ||  |||||||||||||||||  ||||||||||| ||||| |||||||||    
T  51737746 agataagtattcttgagattgttttt-ctttaaaagttattatctctttcttctc 51737693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 36 - 364
Target Start/End: Complemental strand, 50903564 - 50903233
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||| |||       |||||||||||||||| || ||||||||||| ||         
T  50903564 agggggatgtattgaattatgattctatgggattttaaaatactttttaagtatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 50903465  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn---gtcttgtggta 232  Q
      || |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||| |||||||          |||||||||||    
T  50903464 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggta 50903365  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 332  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  50903364 ttcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttat 50903265  T
Q  333 gaaaagatgagatttcttgagattgtttttat 364  Q
    ||||| ||||||||||||||||||||||||||    
T  50903264 gaaaatatgagatttcttgagattgtttttat 50903233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 141 - 372
Target Start/End: Original strand, 52810368 - 52810599
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||       |||||||||||||||||||    
T  52810368 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 52810467  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  52810468 cattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagat 52810567  T
Q  341 gagatttcttgagattgtttttattttaaaag 372  Q
    |||||||||||||||||||||| |||||||||    
T  52810568 gagatttcttgagattgtttttcttttaaaag 52810599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 34 - 392
Target Start/End: Original strand, 10660418 - 10660752
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  10660418 ttagggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 10660517  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       || |||||||||    
T  10660518 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtat 10660617  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||              |||    
T  10660618 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaaca--------------atg 10660693  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  10660694 aaaagatgagatttcttgagattgtttttattttaaaagttactatttttttcttctca 10660752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 30 - 387
Target Start/End: Complemental strand, 23753713 - 23753377
Alignment:
Q  30 agtcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatt 129  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||       |||||||||||||||| || |||||||||||||    
T  23753713 agtcttagggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatt 23753614  T
Q  130 tnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtg 229  Q
    |       || ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||    
T  23753613 taaaaaaagtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtg 23753514  T
Q  230 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||                    ||||||||||||||||||||||||||||||||||    
T  23753513 gtattcaaaatcattcaaatttcgaaggattgtttaataaattgga--------------------ttttgtagtgtaattttaacaagaaaaagtcttt 23753434  T
Q  330 catgaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttct 387  Q
    |||| |||||||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  23753433 catg-aaagatgagatttcttgagattgtttttgttttaaaagttactatctctttct 23753377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 37 - 375
Target Start/End: Complemental strand, 50762370 - 50762042
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    |||||||||||||||||| |||| ||||||||||||||||| |||||||||||       | |||||||||||||| || ||||||||||| ||          
T  50762370 gggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaaa 50762271  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| || ||||||| ||||       |||||||||||||||    
T  50762270 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattca 50762171  T
Q  237 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 336  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  50762170 aaatcattctaatttcgaatgattgtttgataaattggattttgatggatt----------ttgtagtgtaattttaacaagaaaaagtctttcatgaaa 50762081  T
Q  337 agatgagatttcttgagattgtttttattttaaaagtta 375  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  50762080 agatgagatttcttgagattgtttttcttttaaaagtta 50762042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 145 - 387
Target Start/End: Original strand, 18749606 - 18749848
Alignment:
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    ||||||||||||| ||| ||  ||| |||||||||||||||| ||||||||| || | ||||||||| ||       |||||||||||||||||||||||    
T  18749606 ggtattcaatcaaaacttttcatcactttaaaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatt 18749705  T
Q  245 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18749706 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 18749805  T
Q  345 tttcttgagattgtttttattttaaaagttaatatctttttct 387  Q
    |||||||||||||||||| |||||||||||| ||||| |||||    
T  18749806 tttcttgagattgtttttcttttaaaagttactatctctttct 18749848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 38 - 346
Target Start/End: Original strand, 20832882 - 20833187
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||       | |||||||||||||| || | |||||| || ||           
T  20832882 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaagattttttgtaacttaaaa--- 20832978  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || | |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||    
T  20832979 gtctcgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaa 20833078  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||| |||||||||||    
T  20833079 aatcattcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaa 20833178  T
Q  338 gatgagatt 346  Q
    ||| |||||    
T  20833179 gataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 10728857 - 10728633
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||| |||||    
T  10728857 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaat 10728758  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||| ||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10728757 cattcaaatttggaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 10728668  T
Q  341 gagatttcttgagattgtttttattttaaaagtta 375  Q
    |||||||||||||||||||||| ||||||||||||    
T  10728667 gagatttcttgagattgtttttcttttaaaagtta 10728633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 141 - 381
Target Start/End: Original strand, 39038030 - 39038260
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||| ||||||    
T  39038030 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaat 39038129  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||| |||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||| |||||||    
T  39038130 cattcaaatttcgaagaattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagat 39038219  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatct 381  Q
    |||||||||||| ||||||||| |||||||||||| |||||    
T  39038220 gagatttcttgaaattgtttttcttttaaaagttactatct 39038260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 140 - 375
Target Start/End: Original strand, 37454850 - 37455075
Alignment:
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||       ||||||||||||||||||    
T  37454850 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaa 37454949  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 339  Q
    |||||||||||||||| |||||||||||||||          || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37454950 tcattcaaatttcgaatgattgtttaataaat----------tgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 37455039  T
Q  340 tgagatttcttgagattgtttttattttaaaagtta 375  Q
    ||||||||||||||||||||||| ||||||||||||    
T  37455040 tgagatttcttgagattgtttttcttttaaaagtta 37455075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 34 - 362
Target Start/End: Original strand, 20498093 - 20498420
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| |||||| | ||       |||||||||||||||| || ||| ||| ||||||       
T  20498093 ttaggggggtgtattggatcatgattctaagggattttaaaagacttttta-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 20498191  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        |||||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||    
T  20498192 aaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 20498291  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||    
T  20498292 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 20498391  T
Q  334 aaaagatgagatttcttgagattgttttt 362  Q
    |||| ||||||||||||  ||||||||||    
T  20498392 aaaacatgagatttcttaggattgttttt 20498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 50 - 371
Target Start/End: Complemental strand, 6035359 - 6035039
Alignment:
Q  50 gattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtat 149  Q
    ||||| |||| ||||||||||||||||| |||||||||||       |||||||||||||||| ||   ||||||||| ||       |||   ||||||    
T  6035359 gattaagattttatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagtttttttgcaacttaaataaagttca-tggtat 6035261  T
Q  150 tcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 249  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||       |||| ||| |||||||||||||||||||    
T  6035260 tcaatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaat 6035161  T
Q  250 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 349  Q
    ||||||| | ||||||||||||| |||||||||||||||||||||||||| ||||  ||||||| || ||||||||||||||| |||| |||||||||||    
T  6035160 ttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttct 6035061  T
Q  350 tgagattgtttttattttaaaa 371  Q
    | ||||||||||| ||||||||    
T  6035060 taagattgtttttcttttaaaa 6035039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 45 - 362
Target Start/End: Original strand, 19253721 - 19254038
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||||    
T  19253721 tattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgt 19253820  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    | ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||    
T  19253821 gttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 19253920  T
Q  245 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 344  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||    
T  19253921 caaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 19254020  T
Q  345 tttcttgagattgttttt 362  Q
    ||||||  ||||||||||    
T  19254021 tttcttaggattgttttt 19254038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 45 - 362
Target Start/End: Complemental strand, 37820789 - 37820472
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||||    
T  37820789 tattggataatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgt 37820690  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    | ||||||||||||| |||||||||||| |||||| |||||  |||||||||||||||| || |||| ||       |||| ||||||||||||||||||    
T  37820689 gttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 37820590  T
Q  245 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 344  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||  |||| ||||||| || ||||||||||||||| |||| ||||||    
T  37820589 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgaga 37820490  T
Q  345 tttcttgagattgttttt 362  Q
    |||||| |||||||||||    
T  37820489 tttcttaagattgttttt 37820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 38 - 362
Target Start/End: Complemental strand, 996404 - 996081
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| |||||            
T  996404 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatt-aaaaaaa 996306  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| ||||| |||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||||||||    
T  996305 gtcttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaa 996206  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  996205 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 996106  T
Q  338 gatgagatttcttgagattgttttt 362  Q
     ||||||||||||  ||||||||||    
T  996105 catgagatttcttaggattgttttt 996081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 6589450 - 6589775
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    ||||||||||||||| ||||||||| |||| ||||||||| |||||| || ||       ||||||||||||||||||| ||| |||  |||||          
T  6589450 ggggatgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaa 6589549  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || ||||| ||||||||||| | || ||||||||| ||||||||||||  |||||||||||||| | || |||||||       |||| ||||||||||    
T  6589550 agtcttgtgttattcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattca 6589649  T
Q  237 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 336  Q
    |||||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||    
T  6589650 aaatcattcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 6589749  T
Q  337 agatgagatttcttgagattgttttt 362  Q
    | ||||||||||||  ||||||||||    
T  6589750 acatgagatttcttaggattgttttt 6589775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 33 - 362
Target Start/End: Complemental strand, 10139469 - 10139141
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    ||||||||| ||||||| || ||||||||| |||||||||||| | ||||| || ||       |||||||||||||||| || ||| ||| ||||||      
T  10139469 cttaggggg-tgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaa 10139371  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || ||||| ||||||||||||| || || |||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||    
T  10139370 aaaaagtcttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 10139271  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 332  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||    
T  10139270 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 10139171  T
Q  333 gaaaagatgagatttcttgagattgttttt 362  Q
    ||||| ||||||||||||  ||||||||||    
T  10139170 gaaaacatgagatttcttaggattgttttt 10139141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 43 - 362
Target Start/End: Complemental strand, 3206510 - 3206200
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  3206510 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 3206411  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||||||||||||||||| |||||         |||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||    
T  3206410 gtggtattcaatcaagattcttt---------aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 3206320  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||    
T  3206319 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatga 3206220  T
Q  343 gatttcttgagattgttttt 362  Q
    ||||||||  ||||||||||    
T  3206219 gatttcttatgattgttttt 3206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 29 - 347
Target Start/End: Original strand, 35337612 - 35337930
Alignment:
Q  29 tagtcttagggggatgtattggatt-atgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa 127  Q
    |||||||| |||| |||||| || | ||||||||| |||||||||||||| ||||| |||||       |||||||||||||||| || ||| ||| |||    
T  35337612 tagtcttaagggggtgtatttgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaa 35337711  T
Q  128 tttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttg 227  Q
    |||       || ||||| ||||||||||||| || ||||||||||||||||||||||  |||||||||||||| | || |||| ||       |||| |    
T  35337712 tttaaaaaaagtcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag 35337811  T
Q  228 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 327  Q
    ||||||||||||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||| |    
T  35337812 tggtattcaaaaaaattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-t 35337910  T
Q  328 ttcatgaaaagatgagattt 347  Q
    |||||||||| |||||||||    
T  35337911 ttcatgaaaacatgagattt 35337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 97 - 362
Target Start/End: Complemental strand, 44762297 - 44762032
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| |||||||||||| ||||||||| || ||||||||||    
T  44762297 tcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtagtattcaat 44762198  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggat 296  Q
    ||||| | || |||| ||       |||| |||||||| ||||| |||||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  44762197 caagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaaggattgtttaataaatcagattttgatggattttgtgggat 44762098  T
Q  297 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    ||| ||||| ||||||| || |||||||||||| ||||||| |||||||||||| |||||||||||    
T  44762097 tttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaagattgttttt 44762032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 3999861 - 3999640
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        ||| ||||||||||||||    
T  3999861 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaat 3999762  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||  | ||||||||||||||| |||| ||    
T  3999761 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacat 3999662  T
Q  341 gagatttcttgagattgttttt 362  Q
    ||||||||||  ||||||||||    
T  3999661 gagatttcttaggattgttttt 3999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 141 - 359
Target Start/End: Complemental strand, 33808015 - 33807796
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattcaaaa 239  Q
    ||||| |||||||| |||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        |||| |||||||||||||    
T  33808015 ttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaa 33807916  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 339  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |    
T  33807915 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 33807816  T
Q  340 tgagatttcttgagattgtt 359  Q
    |||||||||||  |||||||    
T  33807815 tgagatttcttaggattgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 40246834 - 40247055
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| |||||||||||| |||||||| |||  |||||||||||||| | || |||| ||       |||| ||||||||||||||    
T  40246834 ttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaat 40246933  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||  || |||||||||||||||||||| ||    
T  40246934 cattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacat 40247033  T
Q  341 gagatttcttgagattgttttt 362  Q
    |||||| |||  ||||||||||    
T  40247034 gagattccttatgattgttttt 40247055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 43 - 362
Target Start/End: Original strand, 54625484 - 54625803
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| | ||||||| |||||||||| || ||       | |||| ||||||||| || ||| ||| ||||||       || ||    
T  54625484 tgtattggatcatgattctaagagattttagaagatttttttatcatgaaatttttttgtagtattcaatcaagactctttccaatttaaaaaaagtctt 54625583  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||| | || ||||||||| |||||| |||||  |||||||||||||| | || |||| ||       |||| |||||||||||||| |    
T  54625584 gtgttattcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatta 54625683  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||||    
T  54625684 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatga 54625783  T
Q  343 gatttcttgagattgttttt 362  Q
    |||||||| |||||| ||||    
T  54625784 gatttcttaagattgatttt 54625803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 100 - 374
Target Start/End: Original strand, 44276338 - 44276598
Alignment:
Q  100 tgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaa 199  Q
    |||||||||||||||| ||| |||| |||||       || |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  44276338 tgtggtattcaattaagactctttgtaatttaaaaaaagtcttgtggtattcaattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaa 44276437  T
Q  200 gatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 299  Q
    |||||||||||| ||       ||||  |||||||||||||||||||||||    |||||||||||||||||          ||||||||||||||||||    
T  44276438 gatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt----aggattgtttaataaat----------tggattttgtgggatttt 44276523  T
Q  300 gtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 374  Q
     ||||| ||||||||||||||||| ||||||||||| | ||||||||| ||| |||| ||||| |||||||||||    
T  44276524 ctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggattatttttcttttaaaagtt 44276598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 45 - 362
Target Start/End: Original strand, 25418260 - 25418577
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||| ||||||||| | |||||||||| ||||||| || ||       | |||||||||||||| || ||| ||| || |||       || ||||    
T  25418260 tattggatcatgattctaagagattttaaaaaatttttttatcatgaaaattttttgtggtattcaatcaaaactctttccattttaaaaaaagtcttgt 25418359  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    | ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| |||| |||| ||        ||| | ||||||||||||||||    
T  25418360 gttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcatt 25418459  T
Q  245 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 344  Q
    |||||||  ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||  || |||||||| ||||||||||| ||||||    
T  25418460 caaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgaga 25418559  T
Q  345 tttcttgagattgttttt 362  Q
    || |||  ||||||||||    
T  25418560 ttccttaggattgttttt 25418577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 29449074 - 29448853
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| || |||||||||  |||||||||||   ||||||||||||| | |  |||| ||       |||| ||||||||||||||    
T  29449074 ttgtgttattcaatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaat 29448975  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| ||  ||||||||||||||||||| ||    
T  29448974 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacat 29448875  T
Q  341 gagatttcttgagattgttttt 362  Q
    ||||||||||  ||||||||||    
T  29448874 gagatttcttaggattgttttt 29448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 146 - 350
Target Start/End: Complemental strand, 33996752 - 33996548
Alignment:
Q  146 gtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattc 245  Q
    |||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        ||  |||||||||||||||||||    
T  33996752 gtattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattc 33996653  T
Q  246 aaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 345  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| |||||||| ||||| ||||||| || |||||||||||| || |||| |||||||    
T  33996652 aaatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagat 33996553  T
Q  346 ttctt 350  Q
    |||||    
T  33996552 ttctt 33996548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 193 - 391
Target Start/End: Complemental strand, 39842648 - 39842460
Alignment:
Q  193 caatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtg 292  Q
    ||||||||||||||||||| ||       |||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||     
T  39842648 caatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgt- 39842550  T
Q  293 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
             | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||  |||| |||||||||    
T  39842549 ---------aatgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgggattgtttttcttttaaaagttaccatctctttcttctc 39842460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 149 - 362
Target Start/End: Complemental strand, 53929336 - 53929123
Alignment:
Q  149 ttcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaa 248  Q
    ||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||||||||||| |||    
T  53929336 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaa 53929237  T
Q  249 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 348  Q
    | ||||| |||||||||||||||  |||||||||||||||||| ||||||| ||||| ||||||| || |||||| ||||| ||||||| |||||||||     
T  53929236 tatcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagatttt 53929137  T
Q  349 ttgagattgttttt 362  Q
    ||  ||||||||||    
T  53929136 ttaggattgttttt 53929123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 228 - 362
Target Start/End: Original strand, 5825139 - 5825273
Alignment:
Q  228 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 327  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| || || ||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  328 ttcatgaaaagatgagatttcttgagattgttttt 362  Q
    |||||||||| ||||||||||||  ||||||||||    
T  5825239 ttcatgaaaacatgagatttcttatgattgttttt 5825273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 141 - 349
Target Start/End: Original strand, 29029996 - 29030203
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||||||||||||||||||    
T  29029996 ttgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaat 29030094  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||||||| ||||| || || |||||||||| |||    | ||| ||||||| ||    
T  29030095 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaattttaacatgaattttttttttatgaaaacat 29030194  T
Q  341 gagatttct 349  Q
    |||||||||    
T  29030195 gagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 32 - 211
Target Start/End: Original strand, 18749451 - 18749630
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttn 131  Q
    |||||||| | |||||||||||| |||||||| | ||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||     
T  18749451 tcttagggcggtgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaactta 18749550  T
Q  132 nnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatca 211  Q
          || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||    
T  18749551 aaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatca 18749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 147 - 342
Target Start/End: Complemental strand, 51699689 - 51699495
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| |||||||||||| |||||| |||||  |||||||||||||| | || |||| ||        ||| ||||||||||||||||||||    
T  51699689 tattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattca 51699591  T
Q  247 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    ||||||||||||||| |||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || |||||| |||||| |||||| ||||    
T  51699590 aatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 43 - 350
Target Start/End: Original strand, 52114422 - 52114728
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||| ||||| ||||||||| || ||||||||||||||||| || ||       |||||||||||||||| |||  ||||  ||||||        | ||    
T  52114422 tgtactggatcatgattctaaggaattttaaaagatttttttatcatgataaagtcttgtggtattcaatcaactatttt--caatttaaaaaaaatctt 52114519  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattcaaaatc 241  Q
    ||| ||||||| ||||| |||||||||||| ||||||||||||  |||||||||||||| |||| |||| ||        |||| ||||||||||||||     
T  52114520 gtgttattcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaata 52114619  T
Q  242 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 341  Q
    |||||||||||| |||||||||||||||||  ||||||||| |||||||||| ||||| ||||  ||||||| || |||||| |||||  |||||| |||    
T  52114620 attcaaatttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaacatg 52114719  T
Q  342 agatttctt 350  Q
    |||||||||    
T  52114720 agatttctt 52114728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 175 - 285
Target Start/End: Complemental strand, 539586 - 539476
Alignment:
Q  175 aaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 274  Q
    |||||||||||| |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  275 attttgatgga 285  Q
    |||||||||||    
T  539486 attttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 141 - 289
Target Start/End: Original strand, 6975739 - 6975884
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| ||||||||||||       |||||||||||||||||||    
T  6975739 ttgtggtattcaatcaagactctttgttatttt-aaaaagtcttgaggtattcaatcaagacttttcatcattt--aaaaagtcttgtggtattcaaaat 6975835  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggatttt 289  Q
    |||||||||||||||| ||| |||| ||||||||| ||||  |||||||    
T  6975836 cattcaaatttcgaagaattatttactaaattggaatttgtgggatttt 6975884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 38 - 192
Target Start/End: Complemental strand, 27240562 - 27240408
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||           
T  27240562 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 27240463  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtatt 192  Q
    || ||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  27240462 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 45862983 - 45863060
Alignment:
Q  293 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaa 370  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 45863060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 299
Target Start/End: Complemental strand, 1440169 - 1440010
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||| ||||||||||||| |||||||||||| |||||| || |||  |||||||||||||| | || |||| ||       |||| |||||||||||||    
T  1440169 ttgtgttattcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaa 1440070  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 299  Q
    ||||||||||||| ||||||||||||||||||  |||||||||||||||| |||||||||    
T  1440069 tcattcaaatttccaaggattgtttaataaatcagattttgatggattttatgggatttt 1440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 251
Target Start/End: Original strand, 12103516 - 12103729
Alignment:
Q  35 tagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnn 134  Q
    ||||||||||||||||||||  |||||| |  ||||||||||| |||||||||||       |||||| ||||||||| || ||| |||| |||||        
T  12103516 tagggggatgtattggattagaattctaag--attttaaaagactttttaattatgaaatagtcttgttgtattcaatcaatactctttgtaatttaaaa 12103613  T
Q  135 nnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtatt 234  Q
       || | |||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||       ||||  |||||||    
T  12103614 aa-gtctcgtggtattcaattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtatt 12103712  T
Q  235 caaaatcattcaaattt 251  Q
    |||||||||||||||||    
T  12103713 caaaatcattcaaattt 12103729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 322
Target Start/End: Original strand, 22057751 - 22057933
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagt-cttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||| ||||||||||||| |||||||||||| ||||||   ||||  |||||| ||||||| | || |||| ||        ||| |||||||| ||||    
T  22057751 ttgtgttattcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaa 22057850  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 322  Q
    ||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  22057851 tcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 156 - 374
Target Start/End: Complemental strand, 15493061 - 15492850
Alignment:
Q  156 aagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 255  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||       ||||  ||||||||||||||||||||||||  ||    
T  15493061 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaat-gtctcatggtattcaaaatcattcaaatttttaa 15492963  T
Q  256 ----ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 351  Q
        | ||| |||||||||||||||||||          | |||| || ||||| ||||||||||||||||| |||||||||||   || ||||||||||    
T  15492962 ttaagaattatttaataaattggattttg----------taggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttg 15492873  T
Q  352 agattgtttttattttaaaagtt 374  Q
    |||||||||||||||||||||||    
T  15492872 agattgtttttattttaaaagtt 15492850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 6131316 - 6131228
Alignment:
Q  274 gattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  6131316 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 6131228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 141 - 313
Target Start/End: Original strand, 55235176 - 55235347
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||| || |||||||| |||| |||||||||||||||||  || |||||||||||| | | ||||||| ||       ||||  || ||||||||||    
T  55235176 ttgtggtctttaatcaagattctt-gtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaattaaaaaa-gtctcatgatattcaaaat 55235273  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatgga-ttttgtgggattttgtagtgtaatttta 313  Q
    ||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||| || || |||||||    
T  55235274 cattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaatttta 55235347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 222 - 362
Target Start/End: Original strand, 27899415 - 27899545
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 321  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||            |||||||| ||||||| ||||| ||||||| || ||||    
T  27899415 gtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------cagattttgtaggattttctagtgaaattttagcatgaaa 27899504  T
Q  322 aagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    |||||||||||||||| |||| |||||||  ||||||||||    
T  27899505 aagtctttcatgaaaacatgaaatttcttatgattgttttt 27899545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 362
Target Start/End: Complemental strand, 1440005 - 1439889
Alignment:
Q  246 aaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 345  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||||||||| ||||  ||||||   | |||||||||||||| ||||| |||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  346 ttcttgagattgttttt 362  Q
    || ||  ||||||||||    
T  1439905 tttttaggattgttttt 1439889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 195
Target Start/End: Original strand, 52810305 - 52810464
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||| ||||||||||||| |||||||||||||||||||||| ||||||| |||       | |||||||||||||| || ||| ||||  ||||         
T  52810305 aggggaatgtattggattaggattctatgggattttaaaagactttttaactatgaaaaagtgttgtggtattcaatcaagactctttgtcattttaaaa 52810404  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
      |||||| ||||||||||||||||| ||  |||||| ||||||||||||  ||||||||    
T  52810405 aagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 52810464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 39842748 - 39842659
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa 127  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||       | |||||||||||||| || |||||||||||    
T  39842748 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaa 39842659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 52080003 - 52080065
Alignment:
Q  227 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 289  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||||||  |||||||    
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgtgggatttt 52080065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 23535946 - 23535890
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 278  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 51699739 - 51699675
Alignment:
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    |||||||||||||||||||||||||||   |||| |||||||||||| | |||||||||||||||    
T  51699739 ttttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtattattcaatcaagatt 51699675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 201
Target Start/End: Complemental strand, 6131390 - 6131327
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    |||||||| |||||||||||||||| ||||||||| |||||||| |||  ||||||||||||||    
T  6131390 gttttgtgttattcaatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaaga 6131327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 10728920 - 10728844
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaat 112  Q
    |||||||||||||||||||  ||||||||| ||||||||||| |||||||||||       ||||||||||||||||    
T  10728920 agggggatgtattggattagcattctatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaat 10728844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 15494050 - 15493999
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||||||||||||||||| |||||| |||||||||||||| |||||||||||    
T  15494050 ggggatgtattggattataattctaagggattttaaaagactttttaattat 15493999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 17946214 - 17946291
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaat 112  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||| |||||||||||       ||||||||||||||||    
T  17946214 ttagggggatgtattggattaggattctatagga-tttaaaagactttttaattatgaaaaagtcttgtggtattcaat 17946291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 27899379 - 27899418
Alignment:
Q  144 tggtattcaatcaagactctttgtcattttaaaaaagtct 183  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  27899379 tggtattcaatcaagactctttgtcatttaaaaaaagtct 27899418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 539699 - 539649
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||||||    
T  539699 gggatgtattggattagggttctaagagattttaaaagattttttaattat 539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 1440210 - 1440149
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||   |||||||||||||||    
T  1440210 ttgtggtattcaatcaagactattt-tcaatttaaaaaagtcttgtgttattcaatcaagatt 1440149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 12734163 - 12734114
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| |||||    
T  12734163 ttaggggggtgtattggatcatgattctaagggattttaaaagacttttt 12734114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 6131473 - 6131410
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagat 202  Q
    ||||||||||||||||||||||||||||  || || ||||||||||||   ||||||||||||||    
T  6131473 gttttgtggtattcaatcaagactcttt-ccaattgaaaaaagtcttgtgttattcaatcaagat 6131410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 27240501 - 27240441
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    ||||||||||||||||||||| ||||  | || ||||||||||||  ||||||||||||||    
T  27240501 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaga 27240441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 359
Target Start/End: Complemental strand, 33807730 - 33807678
Alignment:
Q  307 aattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 359  Q
    ||||||| || |||||||||||||||||||| ||||||||||||  |||||||    
T  33807730 aattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 50901261 - 50901209
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||||||||||||||||  ||| || |||||||||||||| |||||||||||    
T  50901261 gggggatgtattggattaaaattttaagggattttaaaagactttttaattat 50901209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 29029895 - 29029937
Alignment:
Q  40 ggatgtattggattatgattctatgggattttaaaagattttt 82  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||    
T  29029895 ggatgtattggatcatgattctaagggattttaaaagactttt 29029937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 40246792 - 40246854
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    ||||||||||||||||||||||||| |  ||| |||||| |||||   |||||||||||||||    
T  40246792 ttgtggtattcaatcaagactctttctggtttaaaaaaaatcttgtgttattcaatcaagatt 40246854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 1440129 - 1440084
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtct 183  Q
    |||||||||||||||||||||||||||  ||| || ||||||||||    
T  1440129 gttttgtggtattcaatcaagactcttaatcacttaaaaaaagtct 1440084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 12103733 - 12103774
Alignment:
Q  294 gattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    |||||| ||||| |||||||||||||| ||||||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaa 12103774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 16010746 - 16010795
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||||||| |||||||||| || |||||| |||||||||||||| |||||    
T  16010746 ttaggggggtgtattggatcataattctaagggattttaaaagacttttt 16010795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 32580063 - 32580100
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaa 75  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  32580063 ggggatgtattggattaggattctatgagattttaaaa 32580100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 38772325 - 38772370
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttga 186  Q
    ||||||||||||||||||| ||||||| | || |||||||||||||    
T  38772325 ttgtggtattcaatcaagattctttgtaacttaaaaaaagtcttga 38772370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 2024155 - 2024191
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaa 177  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  2024155 ttgtggtattcaatcaagactatttgtcatttaaaaa 2024191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 39037982 - 39038031
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaatt 87  Q
    ||||||||||||| |||||  |||||  ||||||||||||||||||||||||    
T  39037982 agggggatgtattagattagaattct--gggattttaaaagattttttaatt 39038031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 53929378 - 53929339
Alignment:
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaa 179  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  53929378 ttttgtggtattcaatcaagactcttt-tcaatttaaaaaa 53929339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 36 - 392
Target Start/End: Original strand, 28342227 - 28342583
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || | ||||||||||||         
T  28342227 agggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaa 28342326  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||       ||||||||||||||    
T  28342327 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattc 28342426  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28342427 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 28342526  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28342527 aagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 28342583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 38 - 392
Target Start/End: Complemental strand, 29615082 - 29614728
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||           
T  29615082 ggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 29614983  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       |||||||| |||||||    
T  29614982 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaa 29614883  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614882 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 29614783  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  29614782 gatgagatttcttgagattatttttattttaaaagttactatctttttcttctca 29614728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 38 - 390
Target Start/End: Original strand, 23101180 - 23101532
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || | ||||||||||||           
T  23101180 ggggatgtatcggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaatttaaaaaaa 23101279  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||||    
T  23101280 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 23101379  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23101380 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 23101479  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttct 390  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23101480 gatgagatttcttgagattgtttttattttaaaagttactatctttttcttct 23101532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 40 - 383
Target Start/End: Original strand, 39783983 - 39784326
Alignment:
Q  40 ggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngt 139  Q
    ||||||||||||||  |||||||||||||||||||||| |||||||||||       || ||||||||||||| || ||||||||||||||       ||    
T  39783983 ggatgtattggattgagattctatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaatttaaaaaaagt 39784082  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||||||||    
T  39784083 cttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaa 39784182  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 339  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39784183 tcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 39784282  T
Q  340 tgagatttcttgagattgtttttattttaaaagttaatatcttt 383  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  39784283 tgagatttcttgagattgtttttattttaaaagttactatcttt 39784326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 39 - 391
Target Start/End: Complemental strand, 9882553 - 9882202
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnng 138  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||||||||       |||| ||||||||||| || ||||||||||||||       |    
T  9882553 gggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaag 9882454  T
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaa 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||||||||    
T  9882453 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 9882354  T
Q  239 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 338  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||     
T  9882353 atcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaa 9882255  T
Q  339 atgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  9882254 atgagatttcttgagattgtttttcttttaaaagttattatctctttcttctc 9882202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 36 - 391
Target Start/End: Original strand, 18838269 - 18838624
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||         
T  18838269 agggggatgtattggattaggattctatgggattataaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaaaa 18838368  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
       | ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||  ||       ||||||||||||||    
T  18838369 aaatattgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattc 18838468  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18838469 aaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaa 18838568  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  18838569 aagatgagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 18838624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 38 - 391
Target Start/End: Original strand, 3022808 - 3023161
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||       | || ||||||| ||| || |||||||  || ||           
T  3022808 ggggatgtattgaattaggattctatgggattttaaaagattttttaattatgaaaaagttttatggtatttaatcaagactttttaaaacttaaaaaaa 3022907  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||       ||||||||||||||||    
T  3022908 gtcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaa 3023007  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3023008 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaa 3023107  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  3023108 gatgagatttcttgagattgtttttcttttaaaagttagtatctctttcttctc 3023161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 38 - 381
Target Start/End: Original strand, 7993024 - 7993367
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||| ||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||           
T  7993024 ggggatgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 7993123  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || | |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| | ||||||||| ||       ||||| ||||||||||    
T  7993124 gtctcgtggtattcaatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaa 7993223  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7993224 aatcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 7993323  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatct 381  Q
    ||| ||||||||||||||||||||| |||||||||||| |||||    
T  7993324 gataagatttcttgagattgtttttcttttaaaagttactatct 7993367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 41 - 391
Target Start/End: Original strand, 33382522 - 33382872
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtt 140  Q
    |||||||| ||||| ||||||||| |||||||||||| |||||||||||       |||| ||||||||||| || ||||||||||| ||       |      
T  33382522 gatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaacttaaaaaaagcc 33382621  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||  |||||||||||||    
T  33382622 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaat 33382721  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33382722 catttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagat 33382821  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||| || ||||||||||| |||||||| ||| ||||| |||||||||    
T  33382822 gagatttatttagattgtttttcttttaaaatttactatctctttcttctc 33382872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 47 - 391
Target Start/End: Complemental strand, 28035114 - 28034770
Alignment:
Q  47 ttggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtg 145  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||       | ||||||||||||||||| | ||||||||| ||       || |||||    
T  28035114 ttggattaggattctatggaattttaaaagacttttttaattattaaaaagttttgtggtattcaattaagattttttgcaacttaaaaaa-gtcttgtg 28035016  T
Q  146 gtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattc 245  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||| ||||||||| ||       ||||||||||||||||||| ||||    
T  28035015 gtattcaatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattc 28034916  T
Q  246 aaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 345  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28034915 aaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagat 28034816  T
Q  346 ttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||| ||||| |||||| ||||| |||||||||    
T  28034815 ttcttgagattgtttttcttttacaagttactatctctttcttctc 28034770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 34 - 391
Target Start/End: Original strand, 37327805 - 37328152
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||||||||| |||||| ||||| |||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       
T  37327805 ttagggggatgtataggattaagattcaatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 37327904  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||       ||||||||||||    
T  37327905 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtat 37328004  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||          |||||||| |||||||||||| |||||||||||||||    
T  37328005 tcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggat----------tttgtagtataattttaacaaaaaaaagtctttcatg 37328094  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||| |||||| |||||||||||||| |||||||||||| |||||  ||||||||    
T  37328095 aaaagataagattttttgagattgtttttcttttaaaagttactatctccttcttctc 37328152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 50 - 391
Target Start/End: Original strand, 12740267 - 12740607
Alignment:
Q  50 gattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtat 149  Q
    ||||| ||||||||| |||||||||||| |||||||||||       ||| ||| |||| |||||| ||||||||||| ||       || |||||||||    
T  12740267 gattaggattctatgagattttaaaagactttttaattatgaaaaaatctggtgatatttaattaagactttttgcaacttaaaaaaagtcttgtggtat 12740366  T
Q  150 tcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 249  Q
    |||||||||| ||||||||||||| |||||||||||| ||||| |||||||||||||||||||||       |||| |||||||||||||||||||||||    
T  12740367 tcaatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaat 12740466  T
Q  250 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 349  Q
    ||| |||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  12740467 ttcaaaggattgtttaataaat-ggattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgagatttct 12740565  T
Q  350 tgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    | ||||||||||  |||||||||||| | ||| |||||||||    
T  12740566 taagattgttttacttttaaaagttactgtctctttcttctc 12740607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 149 - 391
Target Start/End: Original strand, 8675326 - 8675567
Alignment:
Q  149 ttcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaa 248  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||||||||| |||    
T  8675326 ttcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaa 8675425  T
Q  249 tttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 348  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  8675426 cttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttc 8675525  T
Q  349 ttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||||||||| |||| ||||||| ||||| |||||||||    
T  8675526 ttgagattgtttttctttt-aaagttactatctatttcttctc 8675567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 41 - 391
Target Start/End: Complemental strand, 44122216 - 44121875
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaac-actttttgcaatttnnnnnnngt 139  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||||||       | |||||||||||||| ||  | ||||||||| ||             
T  44122216 gatgtattggattagaattctataggattttaaaagattttttaattatgaaaaagtattgtggtattcaatcaaagattttttgcaacttaaaaaaaaa 44122117  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||        |||||||||||||||||    
T  44122116 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaa 44122017  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||| |||||||||    
T  44122016 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttaatgaaaaga 44121927  T
Q  340 tgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||| |||||||||||||| |||||||||||| ||||| |||||||||    
T  44121926 tgagattttttgagattgtttttcttttaaaagttactatctctttcttctc 44121875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 141 - 392
Target Start/End: Original strand, 509641 - 509882
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||       |||||||||||||||||||    
T  509641 ttgtggtattcaatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 509740  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||||||| ||||||||||||||||||||||||||          |||||||||||||  |||||||||||||||||||||||||||||||||    
T  509741 cattcaaatttcgaacgattgtttaataaattggattttgat----------ggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagat 509830  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  509831 gagatttcttgagattgtttttattttaaaagttactatctttttcttctca 509882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 30 - 391
Target Start/End: Complemental strand, 46405757 - 46405406
Alignment:
Q  30 agtcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatt 129  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||| |||||||||||       || ||||||||||||| || ||||||||||| |    
T  46405757 agtcttagggggatatattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaact 46405658  T
Q  130 tnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtg 229  Q
    |        | ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||    
T  46405657 taaaaaaaatcttgcggtattcaatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtg 46405558  T
Q  230 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 329  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||    
T  46405557 gtattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtattt 46405468  T
Q  330 catgaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
     || ||||||||||||||||||||||||||||| |||||||||||| ||||| ||| |||||    
T  46405467 aataaaaagatgagatttcttgagattgtttttcttttaaaagttactatctcttttttctc 46405406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 34 - 322
Target Start/End: Original strand, 32883659 - 32883948
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaat-taacactttttgcaatttnn 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | ||||| |||||||| ||| ||||||||||| ||      
T  32883659 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatgaaaaagttttgtgatattcaatctaagactttttgcaacttaa 32883758  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || || |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||| ||       |||||||||||    
T  32883759 aaaaagtcttatggtattcaatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggta 32883858  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 322  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32883859 ttcaaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 41 - 391
Target Start/End: Original strand, 41827199 - 41827539
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtt 140  Q
    ||||||||||||||  ||| ||||||||||||||||| |||||||||||       |||||||||||||||| || | ||||||||| ||       ||     
T  41827199 gatgtattggattagaattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaacttaaaaaaagtc 41827298  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| || ||||||||||| ||||||| | ||       |||||||||||||||||||    
T  41827299 ttgtggtattcaatcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggtattcaaaat 41827398  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
              | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||    
T  41827399 ----------ttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatat 41827488  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  41827489 gagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 41827539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 36 - 371
Target Start/End: Original strand, 10068346 - 10068682
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||||| |||||||||   ||||||||||||| |||||||||||       ||||||| |||||||| || ||| ||||||||||         
T  10068346 agggggatgtattggaatatgattctgatggattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaaaactctttgcaatttaaaaa 10068445  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtctt-gaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtatt 234  Q
      || |||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| ||       |||||||||||||    
T  10068446 aagtcttgtggtatttaatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtatt 10068545  T
Q  235 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 334  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||| || |||||||| |||||| |    
T  10068546 caaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataa 10068645  T
Q  335 aaagatgagatttcttgagattgtttttattttaaaa 371  Q
    ||| ||||||||| ||  |||||||||| ||||||||    
T  10068646 aaacatgagatttgttaggattgtttttcttttaaaa 10068682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 60 - 390
Target Start/End: Complemental strand, 40461003 - 40460683
Alignment:
Q  60 ctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaaga 159  Q
    ||||| |||||||||||| |||||||||||       | |||||||||| ||| || ||||||||||||||       || ||||| |||||||| ||||    
T  40461003 ctatgagattttaaaagactttttaattatgaaaaagttttgtggtatttaatcaagactttttgcaatttaaaaaatgtcttgtgatattcaattaaga 40460904  T
Q  160 ctctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggat 259  Q
    |||||||||||||||||||||||||||  ||||||||||||| ||||||||| ||       |||||||||||||||||||||||||||||||||| |||    
T  40460903 ctctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgat 40460804  T
Q  260 tgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtt 359  Q
    ||||||||||||||||||||||||||||          |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  40460803 tgtttaataaattggattttgatggatt----------ttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttgagattgtt 40460714  T
Q  360 tttattttaaaagttaatatctttttcttct 390  Q
    ||| |||||||||||| ||||| ||| ||||    
T  40460713 tttcttttaaaagttactatctctttgttct 40460683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 39 - 391
Target Start/End: Original strand, 39027980 - 39028322
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnng 138  Q
    |||||||||||||||| |||| ||| | ||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||            
T  39027980 gggatgtattggattaggattttatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaa 39028079  T
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaa 238  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| ||       |||||||| ||||||||    
T  39028080 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaa 39028179  T
Q  239 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 338  Q
    ||| |||||||| |||| ||||||||||||||||||||||||||          |||||||||||||||| |||||||||||||||| |||||||||||     
T  39028180 atcgttcaaattacgaaagattgtttaataaattggattttgat----------ggattttgtagtgtaactttaacaagaaaaagtttttcatgaaaaa 39028269  T
Q  339 atgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
      |||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  39028270 cagagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 39028322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 45 - 388
Target Start/End: Complemental strand, 44257077 - 44256734
Alignment:
Q  45 tattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgt 144  Q
    |||||||||| ||||| ||| |||||||||| | |||||||||||       |  ||||||||||||| || |||||||||||  |       || ||||    
T  44257077 tattggattaggattcgatgagattttaaaaaagtttttaattatgaaaaagttctgtggtattcaatcaagactttttgcaaccttaaaaaagtcttgt 44256978  T
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
     ||||| |||||||||| ||||||||||||||||| |||| | |||||||||||||| ||||||||| ||       || | ||||||||||||||||||    
T  44256977 agtatttaatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcatt 44256878  T
Q  245 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 344  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||| |||||||| |||||||||||||||||||||||| |||||| |||| ||||||    
T  44256877 caaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgaga 44256778  T
Q  345 tttcttgagattgtttttattttaaaagttaatatctttttctt 388  Q
    ||| |||||||||||||| |||||||||||| ||||| ||||||    
T  44256777 ttttttgagattgtttttcttttaaaagttattatctctttctt 44256734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 41 - 371
Target Start/End: Original strand, 12963587 - 12963911
Alignment:
Q  41 gatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtt 140  Q
    |||||||||||||| ||||||| | |||||||||||| ||||||||||        |||||||||| ||||| || ||| ||||||| ||       ||     
T  12963587 gatgtattggattaggattcta-gagattttaaaagactttttaattacgaaaaagtcttgtggtactcaatcaagactctttgcaacttaaaaaaagtc 12963685  T
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| | ||       |||| ||||||| ||||||    
T  12963686 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaat 12963785  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||  ||||||||||||||  |      ||    
T  12963786 cattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtctttttt-----cat 12963880  T
Q  341 gagatttcttgagattgtttttattttaaaa 371  Q
    |||||||||||||||||||||| ||||||||    
T  12963881 gagatttcttgagattgtttttcttttaaaa 12963911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 34 - 362
Target Start/End: Original strand, 973068 - 973397
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagatttttta-attatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    ||||| || |||||||||| ||||||||| ||||||||||||||||||||  || ||       |||||||||||||||| || ||| ||| ||||||      
T  973068 ttaggagggtgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaa 973167  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         |||||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||        | | ||||||    
T  973168 aaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggta 973267  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 332  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  973268 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcat 973367  T
Q  333 gaaaagatgagatttcttgagattgttttt 362  Q
    ||||| ||||||||||||  ||||||||||    
T  973368 gaaaacatgagatttcttaggattgttttt 973397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 32 - 362
Target Start/End: Original strand, 30440679 - 30441009
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttn 131  Q
    |||||||||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||     
T  30440679 tcttaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaattta 30440778  T
Q  132 nnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggt 231  Q
          || ||||| ||||||||||||| |||||||||||| |||||| |||||  |||||||||||||| | || |||| ||       |||| |||||    
T  30440779 aaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 30440878  T
Q  232 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 331  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||  | |||||||||||||     
T  30440879 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcg 30440978  T
Q  332 tgaaaagatgagatttcttgagattgttttt 362  Q
    |||||| ||||||||||||  ||||||||||    
T  30440979 tgaaaacatgagatttcttaggattgttttt 30441009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 138 - 375
Target Start/End: Original strand, 29585497 - 29585723
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| | |||| |||| ||       ||||| ||||||||||    
T  29585497 gttttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaa 29585595  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||||||||||| ||||    
T  29585596 aatcattcaaattttgaaggattgtttaataatttggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcataaaaa 29585685  T
Q  338 gatgagatttcttgagattgtttttattttaaaagtta 375  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  29585686 gatgaaatttcttgagattgtttttcttttaaaagtta 29585723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 43 - 350
Target Start/End: Complemental strand, 43581403 - 43581096
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| |||||||||  | ||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  43581403 tgtattggatcatgattctaaagaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 43581304  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||    
T  43581303 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 43581204  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  43581203 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 43581104  T
Q  343 gatttctt 350  Q
    ||||||||    
T  43581103 gatttctt 43581096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 43 - 362
Target Start/End: Original strand, 47914160 - 47914479
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    ||||||| || ||||||||| |||||||||||||| || || || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  47914160 tgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagtctt 47914259  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||| ||  |||||||||||||| | || |||| ||       |||| ||| ||||||||||||    
T  47914260 gtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatca 47914359  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  47914360 ttcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 47914459  T
Q  343 gatttcttgagattgttttt 362  Q
    |||||||| |||||||||||    
T  47914460 gatttcttaagattgttttt 47914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 34 - 362
Target Start/End: Original strand, 12893293 - 12893621
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||| |||||||||| ||||||||| || |||||||||||||||||  | ||       |||||||||||||||| || ||| ||| ||||||       
T  12893293 ttaggggggtgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 12893392  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||||| |||||||||||| ||||||||||||  ||||| |||||||| | || |||| ||       ||||  ||||||    
T  12893393 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtat 12893492  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||| |||||| ||||| ||||||| || ||||||||||||||||    
T  12893493 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatg 12893592  T
Q  334 aaaagatgagatttcttgagattgttttt 362  Q
    |||| ||||||||||||  ||||||||||    
T  12893593 aaaacatgagatttcttaggattgttttt 12893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 38 - 362
Target Start/End: Complemental strand, 44343714 - 44343390
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  44343714 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 44343615  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||   ||||||||||||| | || |||| ||       || | |||||||| ||    
T  44343614 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaa 44343515  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||| |||||    
T  44343514 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaa 44343415  T
Q  338 gatgagatttcttgagattgttttt 362  Q
     ||||||||||||  ||||||||||    
T  44343414 catgagatttcttaggattgttttt 44343390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 38 - 347
Target Start/End: Complemental strand, 33892569 - 33892269
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||||       | |||||||||||||| || | ||||||||||||           
T  33892569 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaaaattttttgcaatttaaaaaaa 33892470  T
Q  138 gttttgt-ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
      ||  | ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||||||||||    
T  33892469 aattcttaggtattcaatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattca 33892370  T
Q  237 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 336  Q
    ||||||||||||||||||| ||||||| ||||||||||||||| ||          | |||||||||||||||||||||||||||||||||||||| |||    
T  33892369 aaatcattcaaatttcgaatgattgttaaataaattggatttttat----------gaattttgtagtgtaattttaacaagaaaaagtctttcattaaa 33892280  T
Q  337 agatgagattt 347  Q
    |||||||||||    
T  33892279 agatgagattt 33892269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 17001343 - 17001037
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||||| |||||||||| | |||||||||||       |||||||||||||||| || ||||||||||| ||         
T  17001343 agggggatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 17001244  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| ||||||||| ||        | | |||||||||    
T  17001243 aagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattc 17001144  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||                    ||||||||||||| ||||||||||||||||||||||||    
T  17001143 aaaatcattcaaatttcgaaggattgtttaataaattggatt--------------------ttgtagtgtaattataacaagaaaaagtctttcatgaa 17001064  T
Q  336 aagatgagatttcttgagattgttttt 362  Q
    || |||||||||||||| |||||||||    
T  17001063 aatatgagatttcttgatattgttttt 17001037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 38 - 362
Target Start/End: Complemental strand, 40996968 - 40996643
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagatttttta-attatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    |||| |||||||||| ||||||||| |||||||||||| |||||||  || ||       |||||||||||||||| || ||| ||| ||||||          
T  40996968 gggggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaagagtcttgtggtattcaatcaagactctttccaatttaaaaaa 40996869  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || | ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||  ||       |||| ||||||||||    
T  40996868 agtctcgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattca 40996769  T
Q  237 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 336  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||| ||||||| || |||||||||||||||||||    
T  40996768 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 40996669  T
Q  337 agatgagatttcttgagattgttttt 362  Q
    | ||||||||||||  ||||||||||    
T  40996668 acatgagatttcttaggattgttttt 40996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 242 - 391
Target Start/End: Complemental strand, 37972981 - 37972832
Alignment:
Q  242 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 341  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  342 agatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||| ||||||||||||||||| |||||||||||| ||||| |||||||||    
T  37972881 agacttcttgagattgtttttcttttaaaagttattatctctttcttctc 37972832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 48 - 289
Target Start/End: Original strand, 19251431 - 19251672
Alignment:
Q  48 tggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggt 147  Q
    ||||||| ||||||| | |||||||||||| ||||||||||        |||||| ||||||||| || ||| ||||||| ||       || |||||||    
T  19251431 tggattaggattctaagagattttaaaagactttttaattacgaaaaagtcttgtagtattcaatcaagactctttgcaacttaaaaaaagtcttgtggt 19251530  T
Q  148 attcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaa 247  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||       |||| |||||||||||||||||||||    
T  19251531 attcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaa 19251630  T
Q  248 atttcgaaggattgtttaataaattggattttgatggatttt 289  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19251631 atttcgaaggattgtttaataaattggattttgatggatttt 19251672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 38 - 362
Target Start/End: Complemental strand, 18915053 - 18914729
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| |||  |||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  18915053 gggggtgtattggatcatgtatctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaa 18914954  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||| | |||||||| ||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||||    
T  18914953 gtcttgtgttattcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 18914854  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||| |||| |||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  18914853 aatcattcaaatttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 18914754  T
Q  338 gatgagatttcttgagattgttttt 362  Q
     ||||||||||||  ||||||||||    
T  18914753 catgagatttcttaggattgttttt 18914729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 43 - 362
Target Start/End: Original strand, 47879062 - 47879381
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    ||||||| || ||||||||| |||||||||||||| || || || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  47879062 tgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagtctt 47879161  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||| ||  |||||||||||||| | || |||| ||       |||| ||| ||||||||||||    
T  47879162 gtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatca 47879261  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    |||||||||  ||||||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  47879262 ttcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 47879361  T
Q  343 gatttcttgagattgttttt 362  Q
    |||||||| |||||||||||    
T  47879362 gatttcttaagattgttttt 47879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 43 - 350
Target Start/End: Complemental strand, 20275576 - 20275269
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || | | ||| ||||||       || ||    
T  20275576 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaataagtcttgtggtattcaatcaagattctttccaatttaaaaaaagtctt 20275477  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    | | ||||||||||||| || ||||||||| |||||||||||   |||||||||||||| | || |||| ||       ||||| |||||||||||||||    
T  20275476 gggttattcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatca 20275377  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||| ||||||||  ||||    
T  20275376 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatga 20275277  T
Q  343 gatttctt 350  Q
    ||||||||    
T  20275276 gatttctt 20275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 97 - 362
Target Start/End: Original strand, 34695221 - 34695486
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| || ||||||||| |||||||| |||  |||||||||    
T  34695221 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggtattcaat 34695320  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggat 296  Q
    ||||| | || |||| ||       |||  ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  34695321 caagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggat 34695420  T
Q  297 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    ||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  34695421 tttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 34695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 36 - 371
Target Start/End: Complemental strand, 3797377 - 3797052
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||| |||||||||||||  | ||||||||||| |||||||||||       | ||| |||||||||| || ||| ||||||||||         
T  3797377 agggggatgtattagattatgattctaatgaattttaaaagactttttaattatgaaatagttttgaggtattcaatcaagactctttgcaatttaaaaa 3797278  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      ||  | || |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||    
T  3797277 aagtcatctgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 3797178  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    || |||||| |||||| |||||||||||||||||||| ||||||||         ||||||||| ||||| ||||||| || |||||||||||| | |||    
T  3797177 aagatcattaaaattttgaaggattgtttaataaattagattttga---------tgggattttctagtgaaattttagcatgaaaaagtcttttaagaa 3797087  T
Q  336 aagatgagatttcttgagattgtttttattttaaaa 371  Q
    || || |||||||||  |||||||||| ||||||||    
T  3797086 aacat-agatttcttaggattgtttttcttttaaaa 3797052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 7719475 - 7719254
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||| | | |||||||||| ||||||||||||  |||||||||||||| | || |||| ||        ||| ||||||||||||||    
T  7719475 ttgtgttattcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaat 7719376  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  7719375 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 7719276  T
Q  341 gagatttcttgagattgttttt 362  Q
    ||||||||||  ||||||||||    
T  7719275 gagatttcttaggattgttttt 7719254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 228 - 374
Target Start/End: Complemental strand, 43187485 - 43187339
Alignment:
Q  228 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 327  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  328 ttcatgaaaagatgagatttcttgagattgtttttattttaaaagtt 374  Q
    |||||||| | ||||||||| ||| |||||||||| |||||||||||    
T  43187385 ttcatgaagacatgagattttttgggattgtttttcttttaaaagtt 43187339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 169 - 362
Target Start/End: Complemental strand, 7718549 - 7718356
Alignment:
Q  169 attttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 268  Q
    |||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  269 aattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    |||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||  ||||||||||    
T  7718449 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttt 7718356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 34008904 - 34009226
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||||||||| || ||       |||   |||||||||| || ||| ||| ||||||           
T  34008904 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtct---ggtattcaatcaagactcttttcaatttaaaaaaa 34009000  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtctt-gtggtattca 236  Q
    || ||||| ||||||||||||| | |||||||||| ||||||||||||  |||||||||||| | | || |||| ||       ||| | ||||||||||    
T  34009001 gtcttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattca 34009100  T
Q  237 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 336  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| || |  ||||||| ||  ||||||||||||| ||||    
T  34009101 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaa 34009200  T
Q  337 agatgagatttcttgagattgttttt 362  Q
    | ||||||||||||  ||||||||||    
T  34009201 acatgagatttcttaggattgttttt 34009226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 227 - 362
Target Start/End: Complemental strand, 32143046 - 32142911
Alignment:
Q  227 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 326  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 32142947  T
Q  327 tttcatgaaaagatgagatttcttgagattgttttt 362  Q
    || ||| |||| |||||||||||| |||||||||||    
T  32142946 ttccataaaaacatgagatttcttaagattgttttt 32142911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 141 - 353
Target Start/End: Original strand, 47066688 - 47066881
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattcaaaa 239  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |  |||||||| ||        ||||||||||||||||||    
T  47066688 ttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattcaaaa 47066787  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 339  Q
    |||||||||||||||||||||||||||||||||||||                    ||||||||||||||||||||||||||| | |||||||||||||    
T  47066788 tcattcaaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaaaaaatatttcatgaaaaga 47066867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 48117916 - 48117748
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||      
T  48117916 cttagggggatgtattggattagtattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaa 48117817  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
         || |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  48117816 aaaaagtcttgtggtattcaatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaaga 48117748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 39219592 - 39219371
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaa-gtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    |||||||||||||||||||||||||   |||| |||||| ||||||   ||||||||||||| | || |||| ||       ||||  ||||||||||||    
T  39219592 ttgtggtattcaatcaagactctttccaatttaaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaa 39219493  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 339  Q
    |||||||||||| || | ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| |    
T  39219492 tcattcaaattttgatg-attgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaaca 39219394  T
Q  340 tgagatttcttgagattgttttt 362  Q
    |||||||||||  ||||||||||    
T  39219393 tgagatttcttaggattgttttt 39219371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 141 - 316
Target Start/End: Complemental strand, 10676635 - 10676460
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||| |||||||||||||||  |||| ||||| ||||||  |||||||||||||| ||||||||| ||       ||||  | |||||||||||    
T  10676635 ttgtggtatttaatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaat 10676536  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaca 316  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| | ||| ||||||||||    
T  10676535 cattcaaatttcgaaggattgtttaataaattggatttggatggattttatggaattttcttgtgaaattttaaca 10676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 141 - 326
Target Start/End: Original strand, 25805677 - 25805862
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||| |||||||||||| ||||||| |||| |||||| ||| |  |||||||||||| ||||||||||| ||          ||||||||||||||||    
T  25805677 ttgtggcattcaatcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcatcacttaaaaaaaaatttgtggtattcaaaat 25805776  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 326  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||| || |  ||||||| || |||||||||    
T  25805777 cattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 327
Target Start/End: Original strand, 43679492 - 43679592
Alignment:
Q  227 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  43679492 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 43679591  T
Q  327 t 327  Q
    |    
T  43679592 t 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 227 - 362
Target Start/End: Original strand, 7113530 - 7113665
Alignment:
Q  227 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 326  Q
    |||||||||||||| |||||||||||| |||||||||||||||||  ||||||||| |||||||||||||||| |||   ||||||| || |||||||||    
T  7113530 gtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtc 7113629  T
Q  327 tttcatgaaaagatgagatttcttgagattgttttt 362  Q
    ||||||||||| |||| |||||||  ||||||||||    
T  7113630 tttcatgaaaacatgaaatttcttaggattgttttt 7113665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 147 - 362
Target Start/End: Original strand, 9179871 - 9180076
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||||| |||||||||||| |||||||| |||  |||||||||||||| | ||||||| ||       |||||||||||| |||||||| | |    
T  9179871 tattcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcactta 9179970  T
Q  247 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 346  Q
    |||| ||||||||||||||||||||          |||||||||||||||||| ||||| | ||||| ||  ||||||||||||||||||| ||||||||    
T  9179971 aattccgaaggattgtttaataaat----------tggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatt 9180060  T
Q  347 tcttgagattgttttt 362  Q
    ||||  ||||||||||    
T  9180061 tcttaggattgttttt 9180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 34 - 289
Target Start/End: Original strand, 31638760 - 31639015
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||| || ||||||| || ||||||||| | |||||||||||| ||||| || ||       || ||||||||||||| || ||| ||| ||||||       
T  31638760 ttaggagggtgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtggtattcaatcaagactcttttcaatttaaa 31638859  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||| | |||||||||||| |||||| |  ||  |||||| ||||||| | || |||| ||       |||| |||||||    
T  31638860 aaaagtcttgtgttattcaatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtat 31638959  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 289  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  31638960 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 140 - 280
Target Start/End: Complemental strand, 44623492 - 44623352
Alignment:
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||  ||||| |||||||| | ||||||| ||       |||| ||| |||||||||    
T  44623492 tttgtgatattcaatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaa 44623393  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttg 280  Q
    ||||||| ||||| || || |||||||||||||| ||||||    
T  44623392 tcattcatatttctaaagactgtttaataaattgaattttg 44623352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 252
Target Start/End: Original strand, 29893066 - 29893177
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||| ||       ||||||| ||||| |||||    
T  29893066 ttgtggtattcaatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtatttaaaat 29893165  T
Q  241 cattcaaatttc 252  Q
     |||||||||||    
T  29893166 aattcaaatttc 29893177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 363
Target Start/End: Original strand, 19810874 - 19810996
Alignment:
Q  231 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 330  Q
    |||||||||||||||||||||| || |||||||||||||||||||          |||||||| ||||| ||||| ||||||| ||  |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattgga----------ttttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  331 atgaaaagatgagatttcttgagattgttttta 363  Q
    ||||||| |||||||||||||||||||||||||    
T  19810964 atgaaaacatgagatttcttgagattgttttta 19810996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 21067762 - 21067853
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa 127  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||       |||||||||||||||| || |||||||||||    
T  21067762 agggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 21067853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 195
Target Start/End: Original strand, 509580 - 509737
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||||||       |||||||||||||||| || ||| ||||  ||||           
T  509580 ggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactatttgtcattttaaaaaa 509679  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
    || ||| ||||||||||||||||| ||  |||||| ||||||||||||  ||||||||    
T  509680 gtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 509737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 203
Target Start/End: Original strand, 34695120 - 34695285
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| ||||||| || ||||||||| |||||||||||||| ||||| |||||       |||||||||||||||| || ||| ||| ||||||           
T  34695120 gggggtgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 34695219  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    || |||||||||||||||||||||||||   |||| ||||||||||||   |||||||||||||||    
T  34695220 gtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt 34695285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 286
Target Start/End: Original strand, 447852 - 447913
Alignment:
Q  225 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat 286  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  447852 ttgtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 337
Target Start/End: Original strand, 727406 - 727691
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| |||||||||  |||||||||| || ||||| || ||       ||||| |||||||||| || ||| ||| ||||||       || ||    
T  727406 tgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaagtcttgcggtattcaatcaagactcttttcaatttaaaaaaagtctt 727505  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnng-tcttgtggtattcaaaatc 241  Q
    ||| ||||||||||| | |||||||||||| ||||||||||||   ||||||||||| | | || |||| ||         ||| || ||||||||||||    
T  727506 gtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagtattcaaaatc 727605  T
Q  242 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||| ||||||||||||||||||            |||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  727606 attcaaatttcaaaggattgtttaataaat----------cagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 727691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 141 - 299
Target Start/End: Complemental strand, 1470447 - 1470291
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| |||||||| |||||| |||||||||| ||||||||||||   ||||||||  | | ||||||||||||       || ||||||||||||||||    
T  1470447 ttgtgctattcaattaagactatttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatcatttaaaaaa-gtattgtggtattcaaaat 1470349  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggatttt 299  Q
    | |||||||||  ||| |||||||||| |||| ||||||||| | ||||||||||||||    
T  1470348 cgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggatttt 1470291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 36 - 181
Target Start/End: Complemental strand, 43187663 - 43187518
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||||||||||    |||||| | |||||||||||| |||||||||||       |||||||||||||||| || ||| |||| |||||         
T  43187663 agggggatgtattggatcgaaattctaagagattttaaaagactttttaattatgaaagagtcttgtggtattcaatcaagactctttgtaatttaaaaa 43187564  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagt 181  Q
      || || ||||||||||| || |||||||||||||||||||||||    
T  43187563 aagtcttatggtattcaattaaaactctttgtcattttaaaaaagt 43187518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 201
Target Start/End: Original strand, 8078284 - 8078448
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  8078284 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaa 8078383  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaa-agtcttgaagtattcaatcaaga 201  Q
      |||||| ||||||||||||| |||||||||||| ||||| | |||||  ||||||||||||||    
T  8078384 aatttgtgttattcaatcaagattctttgtcatttaaaaaagaatcttgtggtattcaatcaaga 8078448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 192
Target Start/End: Original strand, 29893003 - 29893159
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||| ||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||| ||||  ||||         
T  29893003 agggggatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaa 29893102  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtatt 192  Q
      ||  || ||||||||||||||||| ||  ||| || |||||||||||| ||||||    
T  29893103 cagtcatgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtagtatt 29893159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 183
Target Start/End: Complemental strand, 10676698 - 10676551
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||| || ||||| | ||||| |||||||||||||| |||||||||||       |||||||||||| ||| || ||| ||||||||||         
T  10676698 agggggatgtgttagattaggtttctaagggattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagactctttgcaatttaaaaa 10676599  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtct 183  Q
      || ||||||||||||||||||||| ||  ||| || ||||||||||    
T  10676598 aggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtct 10676551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 37973091 - 37973007
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacacttttt 123  Q
    |||||||||||||||| ||||||||| |||||||||| | |||||||||||       |||||||||||||||| || |||||||    
T  37973091 gggatgtattggattaggattctatgagattttaaaatactttttaattatgaaagagtcttgtggtattcaatcaagacttttt 37973007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 262 - 371
Target Start/End: Original strand, 10617024 - 10617134
Alignment:
Q  262 tttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat-gagatttcttgagattgttt 360  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||  ||||||  || || ||||||||||| |||| ||  |||||| ||| ||||| ||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacataaagattttttgggattgctt 10617123  T
Q  361 ttattttaaaa 371  Q
    || ||||||||    
T  10617124 ttcttttaaaa 10617134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 32883944 - 32884002
Alignment:
Q  333 gaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||| | |||||||||    
T  32883944 gaaaagatgagatttattgagattgtttttcttttaaaagttactatttgtttcttctc 32884002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 43679359 - 43679403
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  43679359 gggatgtattggatcatgattctaagggattttaaaagatttttt 43679403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 89
Target Start/End: Original strand, 29585439 - 29585490
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||||| ||||| |||||||||||| | ||||||||||||||||||||||||    
T  29585439 ggggatttattgaattatgattctacgagattttaaaagattttttaattat 29585490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 391
Target Start/End: Original strand, 29893173 - 29893220
Alignment:
Q  344 atttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  29893173 atttcttgagattgtttttcttttaaaagttactatctctttcttctc 29893220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 43187600 - 43187557
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtctt 184  Q
    ||||||||||||||||||||||||||| |||| |||||||||||    
T  43187600 ttgtggtattcaatcaagactctttgtaatttaaaaaaagtctt 43187557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 47066630 - 47066677
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  47066630 atgtattggattaggattctatgggatttaaaaagactttttaattat 47066677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 7113409 - 7113479
Alignment:
Q  144 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcattt 214  Q
    ||||||||||||||||||||||   |||| ||||||||||||   |||||||| ||||||||| |||||||    
T  7113409 tggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaattaagattttttatcattt 7113479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 10616931 - 10617003
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatca 211  Q
    |||||||  |||||||| |||| | ||||||||||| |||||||||||| |||||| ||||||||||| |||||    
T  10616931 gttttgtaatattcaat-aagattatttgtcatttttaaaaagtcttgaggtattcgatcaagattttccatca 10617003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 32143176 - 32143132
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttg 185  Q
    ||||| ||||||||||||||||||| | |||| ||||||||||||    
T  32143176 ttgtgatattcaatcaagactctttctaatttaaaaaaagtcttg 32143132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 34 - 392
Target Start/End: Complemental strand, 14000427 - 14000069
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       
T  14000427 ttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 14000328  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
         | ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  14000327 aaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 14000228  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14000227 tcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 14000128  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14000127 aaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 14000069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 40 - 391
Target Start/End: Original strand, 13925821 - 13926172
Alignment:
Q  40 ggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngt 139  Q
    |||||| |||||||| |||||||| |||||||||||||||||||||||||       |||||||||||| ||| || ||||||||||| ||       ||    
T  13925821 ggatgtgttggattaggattctataggattttaaaagattttttaattatgaaaaagtcttgtggtatttaatcaagactttttgcaacttaaaaaaagt 13925920  T
Q  140 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||       ||||||||||||||||||    
T  13925921 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaa 13926020  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13926021 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaaga 13926120  T
Q  340 tgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||| ||||||||||||||||||| || ||||||||| ||||| |||||||||    
T  13926121 tgatatttcttgagattgtttttcttctaaaagttactatctctttcttctc 13926172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 37 - 391
Target Start/End: Complemental strand, 1152422 - 1152068
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||| ||| || | ||||||||| ||          
T  1152422 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagattttttgcaacttaaaaaa 1152323  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
     || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||| ||       |||||||||||||||    
T  1152322 agtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattca 1152223  T
Q  237 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 336  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1152222 aaatcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaa 1152123  T
Q  337 agatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||| |||||||||    
T  1152122 agatgagatttcttaagattgtttttcttttaaaagttactatctctttcttctc 1152068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 33 - 367
Target Start/End: Complemental strand, 4550580 - 4550246
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnn 132  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||      
T  4550580 cttagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaa 4550481  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || ||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||||||| ||       |||||||||||    
T  4550480 aaaaagtcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggta 4550381  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  4550380 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcat 4550281  T
Q  333 gaaaagatgagatttcttgagattgtttttatttt 367  Q
    ||||||||||||||| |||||||||||||| ||||    
T  4550280 gaaaagatgagatttgttgagattgtttttttttt 4550246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 42 - 385
Target Start/End: Complemental strand, 4240766 - 4240433
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttt 141  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||||||       | |||||||||||||| || ||||||||||| ||        | |    
T  4240766 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaatct 4240667  T
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||||||    
T  4240666 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatc 4240567  T
Q  242 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||| |||||    
T  4240566 attcaaatttcgaaggattgtttaataaattggattttgatggatt----------ttgtagtgtaattttaacaagaaaaagtctttcatgaatagatg 4240477  T
Q  342 agatttcttgagattgtttttattttaaaagttaatatcttttt 385  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  4240476 agatttcttgagattgtttttcttttaaaagttactatcttttt 4240433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 36 - 391
Target Start/End: Original strand, 5948995 - 5949339
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||||||| |||||||| ||||||||||||||||||||||  ||||||||||       | |||||||||||||| || ||||||||||| ||         
T  5948995 agggggatgtgttggattaggattctatgggattttaaaagaccttttaattatgaaaaatttttgtggtattcaatcaaaactttttgcaacttaaaaa 5949094  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||        |||||||||||||    
T  5949095 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggtattc 5949193  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  5949194 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggat----------tttgtagtgtaattttaacaagaaaaagtctttcatgaa 5949283  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| ||| |||||    
T  5949284 aagatgagatttcttgagattgtttttcttttaaaagttattatctctttattctc 5949339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 150 - 391
Target Start/End: Complemental strand, 7947779 - 7947538
Alignment:
Q  150 tcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaat 249  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||| | |||||||||||||||||||    
T  7947779 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaat 7947680  T
Q  250 ttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 349  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7947679 ttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttct 7947580  T
Q  350 tgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||| ||||||||| |||||||||||||||||| |||||||||    
T  7947579 tgaaattgtttttcttttaaaagttaatatctctttcttctc 7947538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 34 - 381
Target Start/End: Complemental strand, 40014021 - 40013687
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||| ||||||       ||||||| |||||||| || ||||||||||||||       
T  40014021 ttagggggatgtattggattaggattct--gggattttaaaagattttt-aattatgaaaaagtcttgtgatattcaatcaagactttttgcaatttaaa 40013925  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||        ||||||| |||    
T  40013924 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttat 40013825  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||          |||||||||||||||||||||||||||||||||||||||||    
T  40013824 tcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatg 40013735  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatct 381  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||||    
T  40013734 aaaagatgagatttcttgagattgtttttgtttttaaagttactatct 40013687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 177 - 387
Target Start/End: Original strand, 39852372 - 39852582
Alignment:
Q  177 aaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggat 276  Q
    |||||||||| |||||||||||||| || |||||||||       |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  277 tttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttaa 376  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttac 39852571  T
Q  377 tatctttttct 387  Q
    ||||| |||||    
T  39852572 tatctctttct 39852582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 22746185 - 22746501
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||| | ||||||||||| |||||||||||       ||||||||||||| ||||| ||||||||||| ||           
T  22746185 ggggatgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcgattaagactttttgcaacttaaaaaaa 22746284  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||       |||||||| |||||||    
T  22746285 gtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaa 22746384  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||| |||||||||||||    
T  22746385 aatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtggga--------tgtaattttaacaagaaaaactctttcatgaaaa 22746476  T
Q  338 gatgagatttcttgagattgttttt 362  Q
    ||| ||||||||| |||||||||||    
T  22746477 gataagatttcttaagattgttttt 22746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 32 - 380
Target Start/End: Original strand, 37013796 - 37014124
Alignment:
Q  32 tcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttn 131  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||     
T  37013796 tcttagagggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaactta 37013895  T
Q  132 nnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggt 231  Q
          || ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||| ||       |||||| |||    
T  37013896 aaaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggt 37013995  T
Q  232 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 331  Q
    |||||||||||||||||||||||||| |||||||||||||||||                    ||||||||| ||||||||||||||||||||||||||    
T  37013996 attcaaaatcattcaaatttcgaagggttgtttaataaattgga--------------------ttttgtagtataattttaacaagaaaaagtctttca 37014075  T
Q  332 tgaaaagatgagatttcttgagattgtttttattttaaaagttaatatc 380  Q
    | ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  37014076 taaaaagatgagatttcttgagattgtttttcttttaaaagttactatc 37014124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 105 - 391
Target Start/End: Complemental strand, 1461389 - 1461113
Alignment:
Q  105 tattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattt 204  Q
    ||||||||||| ||||||||||| ||       || ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||    
T  1461389 tattcaattaagactttttgcaacttaaaaatagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagactt 1461290  T
Q  205 ttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagt 304  Q
    ||||||| ||       |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||| |    
T  1461289 ttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt----------ttgtact 1461200  T
Q  305 gtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |||||||||    
T  1461199 gtaattttaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatatctttcttctc 1461113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 34 - 362
Target Start/End: Original strand, 21146951 - 21147279
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       || ||||||||||||| || ||| ||| ||||||       
T  21146951 ttaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaa 21147050  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||    
T  21147051 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 21147150  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||    
T  21147151 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 21147250  T
Q  334 aaaagatgagatttcttgagattgttttt 362  Q
    |||| ||||||||||||  ||||||||||    
T  21147251 aaaacatgagatttcttaggattgttttt 21147279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 34 - 362
Target Start/End: Complemental strand, 33656365 - 33656035
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||| || |||||||||| |||||| || |||||||||||||||||||| || ||       |||||||||||||||| || ||| ||| ||||||       
T  33656365 ttaggagggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaa 33656266  T
Q  134 nnnngttttgtggtattcaatcaagactcttt--gtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggt 231  Q
        || ||||| ||||||||||||| |||||  ||||||| ||||||||||||  |||||||||||||| | || |||| ||        |||  ||||    
T  33656265 aaaagtcttgtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggt 33656166  T
Q  232 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 331  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||    
T  33656165 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 33656066  T
Q  332 tgaaaagatgagatttcttgagattgttttt 362  Q
    |||||| ||||||||||||  ||||||||||    
T  33656065 tgaaaatatgagatttcttaggattgttttt 33656035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 141 - 350
Target Start/End: Complemental strand, 7016954 - 7016745
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    |||||||||||||||||||||||||   |||| |||||||||||| ||||||||||||||| | || |||| ||       |||| ||||||||||||||    
T  7016954 ttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 7016855  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||    
T  7016854 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacat 7016755  T
Q  341 gagatttctt 350  Q
    ||||||||||    
T  7016754 gagatttctt 7016745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 141 - 350
Target Start/End: Complemental strand, 5273134 - 5272925
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||   |||||||||||||| | || |||||||       |||| ||||||||||||||    
T  5273134 ttgtgctattcaatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaat 5273035  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||    
T  5273034 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacat 5272935  T
Q  341 gagatttctt 350  Q
    ||||||||||    
T  5272934 gagatttctt 5272925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 138 - 350
Target Start/End: Original strand, 139261 - 139473
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||| ||  |||||||||||||| |||| |||| ||       |||| |||||||||||    
T  139261 gttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaa 139360  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||||  |||| |||||||| | ||||||||||||||| ||||    
T  139361 aatcattcaaatttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaa 139460  T
Q  338 gatgagatttctt 350  Q
     ||||||||||||    
T  139461 catgagatttctt 139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 27459164 - 27458944
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||| | || |||| ||       |||| ||||||||||||||    
T  27459164 ttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaat 27459066  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| || |||||| || |||||||||| ||    
T  27459065 cattcagattttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacat 27458966  T
Q  341 gagatttcttgagattgttttt 362  Q
    || |||||||  ||||||||||    
T  27458965 gatatttcttaggattgttttt 27458944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 43 - 323
Target Start/End: Original strand, 6460685 - 6460965
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    ||||||| || ||||||||| |||||||||||||||||||| || ||       |||||||||||||||| || ||| ||| ||| ||       || ||    
T  6460685 tgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaaaaagtctt 6460784  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
     || ||||||||||||| |||||||||||| ||||||||| ||  |||||||||||||| | || |||||||        ||| ||||||||||||||||    
T  6460785 atgttattcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatca 6460884  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaa 323  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||| ||||| ||||||| || ||||||    
T  6460885 ttcaaatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 141 - 359
Target Start/End: Complemental strand, 32158113 - 32157891
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattcaaaa 239  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||    | |||| ||        |||| |||||||||||||    
T  32158113 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaa 32158014  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa---agtctttcatgaaa 336  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||  ||||||| || |||||   ||||||||||||||    
T  32158013 tcattcaaatttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaa 32157914  T
Q  337 agatgagatttcttgagattgtt 359  Q
    | |||||||||||| | ||||||    
T  32157913 acatgagatttcttaaaattgtt 32157891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 145 - 304
Target Start/End: Complemental strand, 14465438 - 14465279
Alignment:
Q  145 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcatt 244  Q
    |||||||||||||||||||||||||||| |||||||| ||   |||||||||||||| | ||||||  ||       |||||||||||||||||||||||    
T  14465438 ggtattcaatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcatt 14465339  T
Q  245 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagt 304  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||| ||||    
T  14465338 caaatttcgaaagattgtttaataaatcggattttgatgaattttgtggaattttctagt 14465279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 228 - 337
Target Start/End: Original strand, 849225 - 849334
Alignment:
Q  228 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || ||||||||||    
T  849225 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtct 849324  T
Q  328 ttcatgaaaa 337  Q
    ||||||||||    
T  849325 ttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 43 - 362
Target Start/End: Original strand, 9689554 - 9689869
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||||||||||||| |||||||||| ||| |||||| ||||       |||||||||||||||| || ||| ||| ||| ||       ||  |    
T  9689554 tgtattggattatgattctaagggattttaatagacttttta-ttatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaagaagtcgt 9689652  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaag-tcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
     ||||||||||||||||||||| ||||||| ||||||  || ||  |||||||||||||| | ||||||| ||       ||||||||||||| ||||||    
T  9689653 ctggtattcaatcaagactctt-gtcatttaaaaaaacatcgtg--gtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatc 9689749  T
Q  242 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 341  Q
    ||| |||||||||| |||||||| ||||||| |||||||||||||| |||| |||||| | ||  |||||||  | ||||||||||||||| |||| ||     
T  9689750 att-aaatttcgaatgattgtttgataaattagattttgatggattgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacata 9689848  T
Q  342 agatttcttgagattgttttt 362  Q
    |||||||||  ||||||||||    
T  9689849 agatttcttatgattgttttt 9689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 147 - 362
Target Start/End: Complemental strand, 9220916 - 9220711
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    ||||||||||| ||||||||||||||  |||||||||||   ||||||||||||| | || |||| ||       ||||| || ||||||||||||||||    
T  9220916 tattcaatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattca 9220817  T
Q  247 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 346  Q
    |||||| |||||||||||||| |||| || ||||          | ||||||| ||||  |||||||||| ||||||||||||| |||||| |||| |||    
T  9220816 aatttctaaggattgtttaatgaattagaatttg----------taggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatt 9220727  T
Q  347 tcttgagattgttttt 362  Q
    ||||  ||||||||||    
T  9220726 tcttaggattgttttt 9220711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 7017015 - 7016870
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||           
T  7017015 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 7016916  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtct 183  Q
    || |||| |||||||||||||||||||  ||| || ||||||||||    
T  7016915 gtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtct 7016870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 203
Target Start/End: Complemental strand, 5273275 - 5273114
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnn-tcttgtggtattcaattaacactttttgcaatttnnnnnnngttt 141  Q
    |||||||||| |||||| || |||||||||||||| ||||| || ||        |||||||||||||||| || | | ||| ||||||       || |    
T  5273275 tgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaaaatcttgtggtattcaatcaagattctttccaatttaaaaaaagtct 5273176  T
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatt 203  Q
    |||| ||||||||||||| | |||||||||| ||||||||||||   |||||||||||||||    
T  5273175 tgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagatt 5273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 127
Target Start/End: Complemental strand, 7948630 - 7948546
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa 127  Q
    |||||||||||| |||||||| ||||||||||||| ||||| |||||       ||| |||||||||||| || |||||||||||    
T  7948630 tgtattggattaggattctataggattttaaaagacttttttattatgaaaaagtctcgtggtattcaatcaagactttttgcaa 7948546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 5273218 - 5273153
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||||| |||||   |||| ||||||||||||   ||||||||||||||||||    
T  5273218 ttgtggtattcaatcaagattctttccaatttaaaaaaagtcttgtgttattcaatcaagattttt 5273153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 43319130 - 43319179
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||||||| |||||||||| ||||||||| |||||||||||||| |||||    
T  43319130 ttaggggggtgtattggatcatgattctaagggattttaaaagacttttt 43319179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Complemental strand, 32158156 - 32158059
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcatttt--aaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    ||||||||||||||||||||||||| ||| |||  ||||||||||||   ||||||||||||||| ||  ||||||       ||||||||||||||||    
T  32158156 ttgtggtattcaatcaagactcttt-tcaatttaaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 32158059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 16894117 - 16894057
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    ||||||||||||||||| | |||||   |||| ||||||||||||  ||||||||||||||    
T  16894117 ttgtggtattcaatcaaaattctttccaatttaaaaaaagtcttgtggtattcaatcaaga 16894057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 17518474 - 17518510
Alignment:
Q  170 ttttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||  |||||||||||||||||||    
T  17518474 ttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 36 - 392
Target Start/End: Original strand, 26788671 - 26789026
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||         
T  26788671 agggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaa 26788770  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn--gtcttgtggtat 233  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||          ||||||||||||    
T  26788771 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtat 26788870  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  26788871 tcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat- 26788969  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
      |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26788970 --aagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 26789026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 38 - 391
Target Start/End: Original strand, 28844444 - 28844797
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||           
T  28844444 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 28844543  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||    
T  28844544 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 28844643  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  28844644 aatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaa 28844743  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  28844744 gatgagatttcttgagattgtttttcttttaaaagttagtatctatttcttctc 28844797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 36 - 391
Target Start/End: Original strand, 33135510 - 33135864
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||       |||| ||||||||||| || ||||||||||||||         
T  33135510 agggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaa 33135609  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||| |||||||||    
T  33135610 aagtattgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattc 33135709  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33135710 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aa 33135808  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    || |||||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  33135809 aaaatgagatttcttgagattgtttttcttttaaaagttattatctctttcttctc 33135864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 36 - 391
Target Start/End: Original strand, 10657293 - 10657648
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||  ||||||||||||||||||| || |||||| ||||       || ||||||||||||| ||  ||||||| || ||         
T  10657293 agggggatgtattggatttggattctatgggattttaaatgactttttagttatgaaaaagtcgtgtggtattcaatcaaggctttttgaaacttaaaaa 10657392  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || |||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||||| ||||||||| ||       ||||||||||||||    
T  10657393 aagtcttgtggtattcaatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 10657492  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10657493 aaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaa 10657592  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||| ||||||||||||||||||| ||||||||| || ||||| |||||||||    
T  10657593 aagatgaaatttcttgagattgtttttcttttaaaaggtactatctctttcttctc 10657648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 44 - 375
Target Start/End: Complemental strand, 28740598 - 28740277
Alignment:
Q  44 gtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttg 143  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       || |||    
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 28740499  T
Q  144 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcat 243  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||||||||||||||    
T  28740498 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 28740399  T
Q  244 tcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||| ||||||||||    
T  28740398 tcaaatttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcataaaaagatgag 28740309  T
Q  344 atttcttgagattgtttttattttaaaagtta 375  Q
    ||||||||||||||||||| ||||||||||||    
T  28740308 atttcttgagattgtttttcttttaaaagtta 28740277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 147 - 383
Target Start/End: Original strand, 18177265 - 18177501
Alignment:
Q  147 tattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattca 246  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       || ||||||||||||||||||||||    
T  18177265 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattca 18177364  T
Q  247 aatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 346  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  18177365 aatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatt 18177464  T
Q  347 tcttgagattgtttttattttaaaagttaatatcttt 383  Q
    ||||||||||||||||||||||||||||| |||||||    
T  18177465 tcttgagattgtttttattttaaaagttactatcttt 18177501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 142 - 391
Target Start/End: Original strand, 25288152 - 25288401
Alignment:
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| ||        |||||||||||||||||||    
T  25288152 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatc 25288251  T
Q  242 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 341  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  25288252 attcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatg 25288351  T
Q  342 agatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||||| |||||||||||| ||| | |||||||||    
T  25288352 agatttcttgagattgtttttcttttaaaagttactatatatttcttctc 25288401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 36 - 381
Target Start/End: Original strand, 3463558 - 3463894
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||         
T  3463558 agggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaaaa 3463657  T
Q  136 nngttttgtggtattcaatcaaga-ctctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtatt 234  Q
      || || |  ||||||||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||||||||||       |||||||||||||    
T  3463658 aagtcttataatattcaatcaagaactctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatt 3463757  T
Q  235 caaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 334  Q
     |||||||||||| |||| |||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||    
T  3463758 taaaatcattcaattttcaaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttcatga 3463847  T
Q  335 aaagatgagatttcttgagattgtttttattttaaaagttaatatct 381  Q
    ||| |||||||||||||||||||||||| |||||||||||| |||||    
T  3463848 aaatatgagatttcttgagattgtttttgttttaaaagttactatct 3463894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 38 - 390
Target Start/End: Complemental strand, 13833743 - 13833401
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||||||||       | |||||||||||||| || ||||||||||| ||           
T  13833743 ggggatgtattggattaggattctatgagattttaaaagatattttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaaaa 13833644  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||| ||||||||| ||       ||||| ||||||||||    
T  13833643 gtcttgtggtattcaatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaa 13833544  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||| ||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13833543 aatcattcaaattttgaaggattgtttaataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaa 13833454  T
Q  338 gatgagatttcttgagattgtttttattttaaaagttaatatctttttcttct 390  Q
    |||||||||||||||||||| |||| |||||||| ||| ||||| ||||||||    
T  13833453 gatgagatttcttgagattgcttttcttttaaaaattactatctctttcttct 13833401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 34 - 330
Target Start/End: Original strand, 7026488 - 7026775
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnn-tcttgtggtattcaattaacactttttgcaatttnn 132  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||        |||||||||||||||| || ||||||||||||||      
T  7026488 ttagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaagactttttgcaatttaa 7026587  T
Q  133 nnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggta 232  Q
         || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||       |||||||||||    
T  7026588 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 7026687  T
Q  233 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  7026688 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgat----------ggattttgtagtgtaattttaacaagaaaaagtctttc 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 43 - 362
Target Start/End: Original strand, 16269585 - 16269904
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| |||||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  16269585 tgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 16269684  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||    
T  16269685 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 16269784  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  16269785 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatga 16269884  T
Q  343 gatttcttgagattgttttt 362  Q
    ||||||||  ||||||||||    
T  16269885 gatttcttaggattgttttt 16269904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 34 - 391
Target Start/End: Complemental strand, 215550 - 215206
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||       
T  215550 ttagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 215451  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||||||| ||       |||| |||||||    
T  215450 aaaagtcttgtggtattcaatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtat 215351  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||| ||| ||||||||||| ||    ||   ||| ||  |||     |||||||||||||||||||||||| ||||||||||||||||    
T  215350 tcaaaatcattcaaacttcaaaggattgtttgat----tg---tttaataaatt-----ggattttgtagtgtaattttaaca-gaaaaagtctttcatg 215264  T
Q  334 aaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||| ||||||||||||| |||||||||||| ||||| |||||||||    
T  215263 aaaagatgagatttcatgagattgtttttcttttaaaagttactatctctttcttctc 215206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 36 - 362
Target Start/End: Original strand, 24776242 - 24776568
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| |||  |||||         
T  24776242 aggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaa 24776341  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||    
T  24776342 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 24776441  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  24776442 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 24776541  T
Q  336 aagatgagatttcttgagattgttttt 362  Q
    || ||||||||||||  ||||||||||    
T  24776542 aacatgagatttcttaggattgttttt 24776568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 38 - 362
Target Start/End: Complemental strand, 31170945 - 31170621
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       ||||||| |||||||| || ||| ||| ||||||           
T  31170945 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaa 31170846  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||||    
T  31170845 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 31170746  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  31170745 aatcattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 31170646  T
Q  338 gatgagatttcttgagattgttttt 362  Q
     ||||||||||||  ||||||||||    
T  31170645 catgagatttcttaggattgttttt 31170621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 12407269 - 12407593
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| | |||||||||||| ||||| || ||       |||||||||||||||| || | | ||| ||||||           
T  12407269 gggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattcttttcaattttaaaaaa 12407368  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||| ||| | || |||| ||       |||| |||||||||||    
T  12407369 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaa 12407468  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  12407469 aatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaa 12407568  T
Q  338 gatgagatttcttgagattgttttt 362  Q
     |||||||||||| |||||||||||    
T  12407569 catgagatttcttaagattgttttt 12407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 43 - 362
Target Start/End: Complemental strand, 22552079 - 22551760
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || | ||||| ||||||       || ||    
T  22552079 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattttttccaatttaaaaaaagtctt 22551980  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| |||| |||| ||       |||| |||||||||||||| |    
T  22551979 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatta 22551880  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    ||||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||||    
T  22551879 ttcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatga 22551780  T
Q  343 gatttcttgagattgttttt 362  Q
    ||||||||  ||||||||||    
T  22551779 gatttcttatgattgttttt 22551760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 43 - 362
Target Start/End: Original strand, 35316956 - 35317275
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    ||||||| || ||||||||| |||||||||||| | ||||| || ||       |||||||||||||||| || ||| ||| ||||||       |||||    
T  35316956 tgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtttt 35317055  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| |||||||||||| | ||||||||||||| | || |||| ||       |||| ||||||||||||||||    
T  35317056 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 35317155  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| || |    
T  35317156 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataa 35317255  T
Q  343 gatttcttgagattgttttt 362  Q
    |||||||| | |||||||||    
T  35317256 gatttcttaacattgttttt 35317275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 142 - 391
Target Start/End: Complemental strand, 6224765 - 6224535
Alignment:
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatca-tttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||       |||||||||||||||||||    
T  6224765 tgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaat 6224666  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
     ||||||||||||||||||| ||||||||||||||||                    |||||||||||||||||||||||||||||||||||||||||||    
T  6224665 tattcaaatttcgaaggattatttaataaattggatt--------------------ttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 6224586  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    |||||||||||| ||||||||| |||||||||||| ||||| |||||||||    
T  6224585 gagatttcttgatattgtttttcttttaaaagttactatctctttcttctc 6224535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 97 - 362
Target Start/End: Original strand, 20605184 - 20605449
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||    
T  20605184 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaat 20605283  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggat 296  Q
    ||||| | || |||| ||       |||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  20605284 caagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggat 20605383  T
Q  297 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    ||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  20605384 tttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 20605449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 38 - 280
Target Start/End: Original strand, 3574736 - 3574978
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||||||| ||||||||  ||||||||| ||||||||||| |||||||||||       | |||||||||||||| || ||||||||||| ||           
T  3574736 ggggatgtgttggattagaattctatggaattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaa 3574835  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||| ||||||||| ||       |||||||| |||||||    
T  3574836 gttttgtggtattcaatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaa 3574935  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttg 280  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3574936 aatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 43 - 362
Target Start/End: Complemental strand, 14198892 - 14198574
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| |||  |||||       || ||    
T  14198892 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaa-gtctt 14198794  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||| | |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||  ||||||||||||||||    
T  14198793 gtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatca 14198694  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 342  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||    
T  14198693 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatga 14198594  T
Q  343 gatttcttgagattgttttt 362  Q
    ||||||||  ||||||||||    
T  14198593 gatttcttaggattgttttt 14198574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 39 - 374
Target Start/End: Complemental strand, 10125612 - 10125285
Alignment:
Q  39 gggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnng 138  Q
    |||||||||| |||||  |||||| | ||||||||||||||||||||||||       ||| |||  ||||||| || ||| ||||||||||       |    
T  10125612 gggatgtattcgattagaattctaagagattttaaaagattttttaattatgaaaaagtctcgtgacattcaatcaagactctttgcaatttaaaaaaag 10125513  T
Q  139 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtctt--gaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattca 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||| | ||||||||| ||       ||||  || ||||||    
T  10125512 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattca 10125413  T
Q  237 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 336  Q
    |||||||||||||||| |||||||||||||||||||| ||||||          ||||||||| ||||| |||||||||||||||||||||||||| |||    
T  10125412 aaatcattcaaatttcaaaggattgtttaataaattgaattttg----------tgggattttttagtgaaattttaacaagaaaaagtctttcataaaa 10125323  T
Q  337 agatgagatttcttgagattgtttttattttaaaagtt 374  Q
    | | |||||||||| ||||||||||| |||||||||||    
T  10125322 acacgagatttcttaagattgtttttcttttaaaagtt 10125285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 239 - 391
Target Start/End: Original strand, 43078653 - 43078805
Alignment:
Q  239 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 338  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  339 atgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    || ||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  43078753 ataagatttcttgagattgtttttgttttaaaagttagtatctctttcttctc 43078805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 34 - 337
Target Start/End: Original strand, 1789327 - 1789630
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    |||||||| |||||||||| ||||||||| | |||||||||||||||||| || ||       |||||||||||||||| || ||| ||| ||||||       
T  1789327 ttaggggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgtggtattcaatcaaaactctttccaatttaaa 1789426  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||| ||||||||||||| |||||||||||| |||||||||||    ||||||||||| | | || |||| ||       |||| |||||||    
T  1789427 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtat 1789526  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 333  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||||||     
T  1789527 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatc 1789626  T
Q  334 aaaa 337  Q
    ||||    
T  1789627 aaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 141 - 362
Target Start/End: Original strand, 43847638 - 43847859
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| || |||||||||||    
T  43847638 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaat 43847737  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||||| ||||| ||||| ||||||| || |||||||||| ||||||||| ||    
T  43847738 cattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacat 43847837  T
Q  341 gagatttcttgagattgttttt 362  Q
    ||||||||||  ||||||||||    
T  43847838 gagatttcttaggattgttttt 43847859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 97 - 362
Target Start/End: Complemental strand, 5093309 - 5093044
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||    
T  5093309 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaat 5093210  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggat 296  Q
    |||||   || |||| ||       |||| || |||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  5093209 caagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggat 5093110  T
Q  297 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    ||| || || ||||||| || ||||||||||||||| |||| ||||||||||||  ||||||||||    
T  5093109 tttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgttttt 5093044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 43 - 313
Target Start/End: Original strand, 44765669 - 44765939
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  44765669 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaaagtctt 44765768  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatca 242  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||| ||| | || |||| ||       |||| ||||||||||||||||    
T  44765769 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 44765868  T
Q  243 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttta 313  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||    
T  44765869 ttcaaatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaatttta 44765939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 141 - 391
Target Start/End: Original strand, 378929 - 379169
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||| ||||  | || ||||||||||||  |||||||||||| | ||||  ||||||       || |  |||||||||||||    
T  378929 ttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattcaaaat 379028  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||          |||||||||||||||||||||||||| || |||||||||||||    
T  379029 cattcaaattttgaaggattgtttaataaattggattttgatagatt----------ttgtagtgtaattttaacaagaaaaaatcgttcatgaaaagat 379118  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||| |||||||||||||| |||||||| ||| ||||| |||||||||    
T  379119 gagatttattgagattgtttttcttttaaaacttactatctctttcttctc 379169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 54 - 350
Target Start/End: Original strand, 32125155 - 32125454
Alignment:
Q  54 atgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaa 153  Q
    |||||| || |||||||||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||       || ||||| |||||||    
T  32125155 atgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaa 32125254  T
Q  154 tcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcat---catttnnnnnnngtcttgtggtattcaaaatcattcaaatt 250  Q
    |||| | |||||||||||| ||||||||| ||  |||||||||||||| | || ||   |||||       |||  ||||||||||||||||||||||||    
T  32125255 tcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattcaaatt 32125354  T
Q  251 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 350  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| || |||||||||||||||||||| ||||||||||||    
T  32125355 tcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagatttctt 32125454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 38 - 360
Target Start/End: Complemental strand, 305788 - 305464
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaaga-ttttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    |||| |||||||||| ||||||||| | |||||||||||| |||||| || ||       |||||||||||||||| || ||| ||| ||||||          
T  305788 gggggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 305689  T
Q  137 n-gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||| ||||||||||||| | |||||||||| ||||||||||||  |||||||||||||| | || |||| ||       |||| |||||||||    
T  305688 aagtcttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 305589  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    |||||||||||||||| ||| |||||||||||||||  ||||| ||||||||||||| |||||| ||||| |||||||  | ||||||||||||||||||    
T  305588 aaaatcattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaa 305489  T
Q  336 aagatgagatttcttgagattgttt 360  Q
    || ||||||||||||  ||||||||    
T  305488 aacatgagatttcttaggattgttt 305464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 142 - 362
Target Start/End: Original strand, 9120119 - 9120339
Alignment:
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    ||||||||||||||||||||||||   |||||||||||||||||   ||||||||||||||| || |||| ||        ||| ||| |||||||||||    
T  9120119 tgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatc 9120218  T
Q  242 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 341  Q
    ||||| ||||  ||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||  | | |||| ||||||||||||| |||    
T  9120219 attcagattttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatg 9120318  T
Q  342 agatttcttgagattgttttt 362  Q
    |||||||||  ||||||||||    
T  9120319 agatttcttaggattgttttt 9120339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 38 - 289
Target Start/End: Complemental strand, 26601521 - 26601270
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||| |||||  ||||||||||||| ||||| |||||       |||||||||||||||| || ||| |||  |||||           
T  26601521 gggggtgtattggatcatgtttctaaaggattttaaaagacttttttattattaaaaagtcttgtggtattcaatcaaaactctttctaatttaaaaaaa 26601422  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    |||||||| |||| ||||||||||||||||||||  |||||||||||| ||||||||||||||| | || |||| ||       |||  |||||||||||    
T  26601421 gttttgtgttatttaatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaa 26601322  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 289  Q
    |||||||||||||||||| | |||||||||||||  |||||||  |||||||    
T  26601321 aatcattcaaatttcgaatgtttgtttaataaatcagattttgtgggatttt 26601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 313 - 391
Target Start/End: Original strand, 7027051 - 7027129
Alignment:
Q  313 aacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7027051 aacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 7027129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 43 - 201
Target Start/End: Original strand, 20605046 - 20605204
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||| |||||||| ||       |||||||||||||||| || ||| ||| ||||||       || ||    
T  20605046 tgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 20605145  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    ||| ||||||||||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  20605146 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 20605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 181
Target Start/End: Original strand, 378866 - 379011
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||| |||||| || |||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||         
T  378866 agggggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 378965  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagt 181  Q
      || ||||||||||||||||| ||| ||| |||||| ||||||||    
T  378966 aagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagt 379011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 293 - 371
Target Start/End: Original strand, 3574971 - 3575049
Alignment:
Q  293 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaa 371  Q
    ||||||||||||||||||||||||| ||||| | |||| | ||||| ||||||||||||||||||||||| ||||||||    
T  3574971 ggattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagttgagatttcttgagattgtttttcttttaaaa 3575049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 43825078 - 43825131
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43825078 aggggaatgtattggattatgattctatgagattttaaaagattttttaattat 43825131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 21370687 - 21370631
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 278  Q
    |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 43078560 - 43078638
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaat 112  Q
    ||||| ||||||||||||||| |||||||||||||||||||||| ||||| |||||       ||||||||||||||||    
T  43078560 ttaggaggatgtattggattaggattctatgggattttaaaagactttttgattatgaaaaagtcttgtggtattcaat 43078638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 20605102 - 20605198
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    |||||||||||||||||||||||||   |||| ||||||||||||   ||||||||||||||| ||  ||||||       ||||||||||||||||    
T  20605102 ttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa 20605198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 201
Target Start/End: Original strand, 19144904 - 19145078
Alignment:
Q  29 tagtcttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaat 128  Q
    |||| ||| |||| ||||||||| |||||||||| |||||||||||| ||||||| || ||       |||||||||||||||| || |||  || |||     
T  19144904 tagtattaagggggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgtggtattcaatcaaaactcatttcaa- 19145002  T
Q  129 ttnnnnnnngttttgtggtattcaatcaag---actctttgtcattttaaaaaagtcttgaagtattcaatcaaga 201  Q
    ||        | ||||||||||||||||||   ||||||| |||||| ||||||| ||||  ||||||||||||||    
T  19145003 ttaaaaaaaatcttgtggtattcaatcaagagtactctttatcatttaaaaaaagacttgtggtattcaatcaaga 19145078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 9120057 - 9120102
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||| |||||||||| ||||||||| |||||||||||||| |||||    
T  9120057 gggggtgtattggatcatgattctaagggattttaaaagacttttt 9120102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 8172170 - 8172210
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagt 181  Q
    |||||||||| |||||||||||||||||| || ||||||||    
T  8172170 ttgtggtatttaatcaagactctttgtcacttcaaaaaagt 8172210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 24193595 - 24193631
Alignment:
Q  170 ttttaaaaaagtcttgaagtattcaatcaagattttt 206  Q
    ||||||||||||||||  |||||||||||||||||||    
T  24193595 ttttaaaaaagtcttggggtattcaatcaagattttt 24193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 223; Significance: 1e-122; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 42 - 387
Target Start/End: Original strand, 10452 - 10797
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttt 141  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||||||       || |    
T  10452 atgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtct 10551  T
Q  142 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatc 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||        |||||||||||||||||||    
T  10552 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatc 10651  T
Q  242 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 341  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10652 attcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 10751  T
Q  342 agatttcttgagattgtttttattttaaaagttaatatctttttct 387  Q
    ||||||||||||||||||||| |||||||||||| ||||| |||||    
T  10752 agatttcttgagattgtttttgttttaaaagttactatctctttct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 56 - 391
Target Start/End: Complemental strand, 39918 - 39583
Alignment:
Q  56 gattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatc 155  Q
    ||||||||| ||||||||||||  ||||||||||       |||||||||||||||| || ||||||| ||| ||       ||||||||||||||||||    
T  39918 gattctatgagattttaaaagaccttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagttttgtggtattcaatc 39819  T
Q  156 aagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaa 255  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||       ||| ||||||||||||||||||||||| ||||||    
T  39818 aagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaacttcgaa 39719  T
Q  256 ggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 355  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39718 ggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagat 39619  T
Q  356 tgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||| |||||||||||| ||||| |||||||||    
T  39618 tgtttttcttttaaaagttactatctctttcttctc 39583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 183; Significance: 7e-99; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 37 - 391
Target Start/End: Original strand, 750 - 1101
Alignment:
Q  37 gggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnn 136  Q
    |||| ||||||||||||| |||||||||||||||||||||| |||||||||||       |||||||||||||||| || ||||||||||| ||          
T  750 ggggaatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaattcttgtggtattcaatcaagactttttgcaacttaaaaaa 849  T
Q  137 ngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnn-gtcttgtggtattc 235  Q
     || ||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||| ||        ||||||||||||||    
T  850 agtcttgtggtattcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattc 949  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  950 aaaatcattcaaatttcgaagaattatttaataaatag-attttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaa 1048  T
Q  336 aagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    || ||||||||||||||||||||||   |||||||||||| ||||| |||||||||    
T  1049 aatatgagatttcttgagattgttt---ttttaaaagttactatctctttcttctc 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 151; Significance: 9e-80; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 141 - 391
Target Start/End: Complemental strand, 58292 - 58042
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaaga-tttttcatcatttnnnnnnngtcttgtggtattcaaaa 239  Q
    ||||||||||||||||||||| |||| ||  ||||||||||||||  ||||||| |||||| |||||||||| ||       ||  ||||||||||||||    
T  58292 ttgtggtattcaatcaagactttttg-caacttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattcaaaa 58194  T
Q  240 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 339  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  58193 tcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaaaga 58094  T
Q  340 tgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  58093 tgagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 58042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 58353 - 58264
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa 127  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||||||       |||||||||||||||| || |||||||||||    
T  58353 ggggatgtattggattaggattccatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 58264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 148; Significance: 6e-78; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 141 - 392
Target Start/End: Original strand, 13873 - 14114
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||| ||       |||||||||||||||||||    
T  13873 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 13972  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||| || ||||||||||||||||||||||||||          |||||||||||||  ||||||| |||||||||||||||||||||||||    
T  13973 cattcaaatttcaaaagattgtttaataaattggattttgat----------ggattttgtagtgggattttaataagaaaaagtctttcatgaaaagat 14062  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  14063 gagatttcttgagattgtttttcttttaaaagttactatctctttcttctca 14114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 195
Target Start/End: Original strand, 13810 - 13969
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||| ||||  ||||         
T  13810 agggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaa 13909  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
      || ||| ||||||||||||||||| ||  ||| || ||||||||||||  ||||||||    
T  13910 aagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 13969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 148; Significance: 6e-78; HSPs: 3)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 141 - 392
Target Start/End: Complemental strand, 21454 - 21213
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||| ||       |||||||||||||||||||    
T  21454 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 21355  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    |||||||||||| || |||||||||||||||||||||||||||||||          ||||||||  ||||||| |||||||||||||||||||||||||    
T  21354 cattcaaatttcaaaagattgtttaataaattggattttgatggatt----------ttgtagtgggattttaataagaaaaagtctttcatgaaaagat 21265  T
Q  341 gagatttcttgagattgtttttattttaaaagttaatatctttttcttctca 392  Q
    |||||||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  21264 gagatttcttgagattgtttttcttttaaaagttactatctctttcttctca 21213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 262 - 392
Target Start/End: Original strand, 28463 - 28584
Alignment:
Q  262 tttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 361  Q
    |||||||||||||||||||||||||||||         ||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28463 tttaataaattggattttgatggattttg---------gtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 28553  T
Q  362 tattttaaaagttaatatctttttcttctca 392  Q
    | |||||||||||| ||||| ||||||||||    
T  28554 tcttttaaaagttactatctctttcttctca 28584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 195
Target Start/End: Complemental strand, 21517 - 21358
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    ||||||||||||||||||| ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || ||| ||||  ||||         
T  21517 agggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaa 21418  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
      || ||| ||||||||||||||||| ||  ||| || ||||||||||||  ||||||||    
T  21417 aagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 21358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 143; Significance: 5e-75; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 34 - 287
Target Start/End: Original strand, 4084 - 4337
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnn 133  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| |       |||||||||||||||| || ||||||||||| ||       
T  4084 ttagggggatgtattggattaggattctataggattttaaaagactttttaattttgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaa 4183  T
Q  134 nnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtat 233  Q
        || ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||       ||||||||||||    
T  4184 aaaagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 4283  T
Q  234 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 287  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4284 tcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 15351 - 15028
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| ||||||||| |||   |||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||         
T  15351 aggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaa 15255  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || |||| ||       |||| |||||||||    
T  15254 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 15155  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  15154 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 15055  T
Q  336 aagatgagatttcttgagattgttttt 362  Q
    || |||| |||||||  ||||||||||    
T  15054 aacatgaaatttcttaggattgttttt 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 36 - 362
Target Start/End: Complemental strand, 15994 - 15671
Alignment:
Q  36 agggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnn 135  Q
    |||||| |||||||||| ||||||||| |||   |||||||| ||||| || ||       |||||||||||||||| || ||| ||| ||||||         
T  15994 aggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaa 15898  T
Q  136 nngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
      || ||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||| | || |||| ||       |||| |||||||||    
T  15897 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 15798  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||    
T  15797 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 15698  T
Q  336 aagatgagatttcttgagattgttttt 362  Q
    || |||| |||||||  ||||||||||    
T  15697 aacatgaaatttcttaggattgttttt 15671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 128; Significance: 5e-66; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 222 - 391
Target Start/End: Complemental strand, 37042 - 36876
Alignment:
Q  222 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 321  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37042 gtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 36943  T
Q  322 aagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttaatatctttttcttctc 391  Q
    ||||||||||||||||||| ||||||||||||||||   || |||||||||||| ||||| |||||||||    
T  36942 aagtctttcatgaaaagataagatttcttgagattg---ttcttttaaaagttattatctctttcttctc 36876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 37081 - 37027
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaa 195  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37081 ttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 37133 - 37091
Alignment:
Q  47 ttggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||||||| |||| ||||||||||||||||| |||||||||||    
T  37133 ttggattaggattatatgggattttaaaagactttttaattat 37091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 38 - 350
Target Start/End: Original strand, 100099 - 100411
Alignment:
Q  38 ggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnn 137  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||| || ||       |||| || |||||||| |||||  ||| ||||||           
T  100099 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttctgatattcaatcaacacactttccaatttaaaaaaa 100198  T
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaa 237  Q
    || ||||| ||||||||||||| |||||||||||| ||||||||||||  ||| |||||||||| | || |||| ||       |||| |||||||||||    
T  100199 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 100298  T
Q  238 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 337  Q
    ||||||||||||||| ||||||||||||||||||   |||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||    
T  100299 aatcattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaa 100398  T
Q  338 gatgagatttctt 350  Q
     ||||||||||||    
T  100399 catgagatttctt 100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 111; Significance: 7e-56; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 138 - 362
Target Start/End: Original strand, 102081 - 102307
Alignment:
Q  138 gttttgtggtattcaatcaagactctttgtcattttaaaaaag--tcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattc 235  Q
    |||||||| ||||||||||||| |||||||||||| |||||||  |||||  |||||||||||||| | || |||| ||       |||| |||||||||    
T  102081 gttttgtgttattcaatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 102180  T
Q  236 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 335  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| ||    
T  102181 aaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaa 102280  T
Q  336 aagatgagatttcttgagattgttttt 362  Q
    || ||||||||||||  ||||||||||    
T  102281 aatatgagatttcttatgattgttttt 102307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 141 - 362
Target Start/End: Complemental strand, 39111 - 38890
Alignment:
Q  141 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaat 240  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||  ||||||||| |||| | || |||| ||       |||| ||| ||||||||||    
T  39111 ttgtggtattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaat 39012  T
Q  241 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 340  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||  || |||||||||||||||||||| ||    
T  39011 cattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacat 38912  T
Q  341 gagatttcttgagattgttttt 362  Q
    |||||| |||  ||||||||||    
T  38911 gagattccttaggattgttttt 38890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 251 - 388
Target Start/End: Complemental strand, 3798 - 3661
Alignment:
Q  251 tcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 350  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||| ||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatatttttt 3699  T
Q  351 gagattgtttttattttaaaagttaatatctttttctt 388  Q
    |||||||||||| |||||||||||| ||||| ||||||    
T  3698 gagattgtttttcttttaaaagttactatctctttctt 3661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 175 - 362
Target Start/End: Complemental strand, 38786 - 38600
Alignment:
Q  175 aaaaagtcttgaagtattcaatcaagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 274  Q
    |||||||||||  |||||||||||||| | || |||| ||       |||| ||||||||||||||||||||||||||||||||||||||||||| |  |    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcag 38688  T
Q  275 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 362  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||  ||||||||||    
T  38687 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 38600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 38834 - 38794
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagatttttt 83  Q
    |||||||||| ||||||||| ||||||||||||||| ||||    
T  38834 tgtattggatcatgattctaagggattttaaaagatatttt 38794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 88; Significance: 4e-42; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 282 - 381
Target Start/End: Original strand, 14892 - 14991
Alignment:
Q  282 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttaatatct 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgtttttcttttaaaagttactatct 14991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 14778 - 14872
Alignment:
Q  33 cttagggggatgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaa 127  Q
    |||| ||||||||||||||||  ||||||||| |||||||||||| |||||||||||       |||||||||||||||| || |||||||||||    
T  14778 cttacggggatgtattggatttggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 14872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 97 - 367
Target Start/End: Complemental strand, 799 - 529
Alignment:
Q  97 tcttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaat 196  Q
    |||||||||||||||| || ||| ||| ||||||       || ||||| ||||||||||||| |||||||||||| |||||||| |||  |||||||||    
T  799 tcttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggtattcaat 700  T
Q  197 caagatttttcatcatttnnnnnnngtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggat 296  Q
    ||| | | || |||| ||        | | ||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||||||||||| ||    
T  699 caaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatggattttgtggaat 600  T
Q  297 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatttt 367  Q
    ||| ||||| ||||||   | |||||||||||| | ||||| ||||||||||||  |||| ||||| ||||    
T  599 tttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttcttaggattttttttttttt 529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 54; Significance: 7e-22; HSPs: 6)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 233685 - 233795
Alignment:
Q  98 cttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatc 197  Q
    ||||||||||||||| || ||||||||||| ||       || |||||||||||||||||||||||||||||||||||||||||||| | || |||||||    
T  233685 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatc 233784  T
Q  198 aagatttttca 208  Q
    || | ||||||    
T  233785 aaaacttttca 233795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 234533 - 234643
Alignment:
Q  98 cttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatc 197  Q
    ||||||||||||||| || ||||||||||| ||       || |||||||||||||||||||||||||||||||||||||||||||| | || |||||||    
T  234533 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatc 234632  T
Q  198 aagatttttca 208  Q
    || | ||||||    
T  234633 aaaacttttca 234643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 222517 - 222627
Alignment:
Q  98 cttgtggtattcaattaacactttttgcaatttnnnnnnngttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatc 197  Q
    ||||||||||||||| || ||||||||||| |        || ||||||||||||||||| |||||||||||||||||||||||||| | || |||||||    
T  222517 cttgtggtattcaatcaaaactttttgcaactaagaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatc 222616  T
Q  198 aagatttttca 208  Q
    || | ||||||    
T  222617 aaaacttttca 222627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 222469 - 222507
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggatttta 72  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  222469 ttagggggatgtattggattaagattctatgggatttta 222507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 233637 - 233675
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggatttta 72  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  233637 ttagggggatgtattggattaggattctatgggatttta 233675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 234485 - 234523
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggatttta 72  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  234485 ttagggggatgtattggattaggattctatgggatttta 234523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 181
Target Start/End: Original strand, 8655 - 8793
Alignment:
Q  43 tgtattggattatgattctatgggattttaaaagattttttaattatnnnnnnntcttgtggtattcaattaacactttttgcaatttnnnnnnngtttt 142  Q
    |||||||||| ||||||||| |||||||||||||||||||| || ||       | |||||||||||||| || ||||||| ||||||       || ||    
T  8655 tgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtctt 8754  T
Q  143 gtggtattcaatcaagactctttgtcattttaaaaaagt 181  Q
    ||| |||| |||||||| |||||||||||| ||||||||    
T  8755 gtgttatttaatcaagattctttgtcatttaaaaaaagt 8793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 12096 - 12041
Alignment:
Q  34 ttagggggatgtattggattatgattctatgggattttaaaagattttttaattat 89  Q
    |||| |||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  12096 ttagagggatgtattggattaggattctatgggattttaaaagactttttaattat 12041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 11998 - 12039
Alignment:
Q  42 atgtattggattatgattctatgggattttaaaagatttttt 83  Q
    ||||||||||||| |||||||||||||||||||||| |||||    
T  11998 atgtattggattaggattctatgggattttaaaagacttttt 12039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 305
Target Start/End: Original strand, 199905 - 199980
Alignment:
Q  230 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtg 305  Q
    ||||| |||||||||||||||| ||| || |||||||||||||| |||||||| ||||||||| |||||| |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtg 199980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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