View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3819_low_7 (Length: 209)

Name: NF3819_low_7
Description: NF3819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3819_low_7
NF3819_low_7
[»] chr4 (18 HSPs)
chr4 (1-199)||(30790522-30790713)
chr4 (133-189)||(26165381-26165437)
chr4 (133-199)||(35999693-35999759)
chr4 (136-199)||(10400810-10400873)
chr4 (132-199)||(41744221-41744288)
chr4 (133-199)||(25932448-25932514)
chr4 (133-199)||(40435907-40435973)
chr4 (133-199)||(47670369-47670435)
chr4 (133-199)||(48879332-48879398)
chr4 (133-173)||(23173021-23173061)
chr4 (133-185)||(31937871-31937923)
chr4 (133-199)||(18405236-18405302)
chr4 (133-199)||(23686794-23686860)
chr4 (133-199)||(27555417-27555483)
chr4 (133-199)||(39835309-39835375)
chr4 (137-199)||(45596275-45596337)
chr4 (133-199)||(45747798-45747864)
chr4 (143-199)||(8322252-8322308)
[»] chr8 (14 HSPs)
chr8 (133-199)||(25899635-25899701)
chr8 (133-199)||(42755870-42755936)
chr8 (133-199)||(12710648-12710714)
chr8 (133-199)||(26062147-26062213)
chr8 (133-199)||(32660935-32661001)
chr8 (133-199)||(33444628-33444694)
chr8 (133-199)||(38132739-38132805)
chr8 (132-177)||(5020491-5020536)
chr8 (136-185)||(43871971-43872020)
chr8 (135-193)||(7931248-7931306)
chr8 (133-199)||(10896219-10896285)
chr8 (133-199)||(18726621-18726687)
chr8 (133-199)||(21137134-21137200)
chr8 (137-193)||(15226973-15227029)
[»] chr2 (17 HSPs)
chr2 (133-199)||(25455027-25455093)
chr2 (146-198)||(17542373-17542425)
chr2 (135-199)||(39819699-39819763)
chr2 (133-185)||(40570037-40570089)
chr2 (133-177)||(7007598-7007642)
chr2 (133-199)||(9733848-9733914)
chr2 (133-199)||(41750532-41750598)
chr2 (134-199)||(18713660-18713725)
chr2 (135-199)||(14832813-14832877)
chr2 (136-199)||(5770115-5770178)
chr2 (132-199)||(37192525-37192592)
chr2 (133-199)||(346347-346413)
chr2 (133-199)||(34356702-34356768)
chr2 (133-199)||(39995133-39995199)
chr2 (133-199)||(40950861-40950927)
chr2 (130-186)||(24499456-24499512)
chr2 (135-199)||(28311701-28311765)
[»] chr1 (30 HSPs)
chr1 (133-199)||(13931886-13931952)
chr1 (133-202)||(1227881-1227949)
chr1 (133-199)||(6911497-6911563)
chr1 (133-199)||(48916024-48916090)
chr1 (133-199)||(49822919-49822985)
chr1 (133-199)||(6978774-6978840)
chr1 (133-199)||(9115841-9115907)
chr1 (133-199)||(25789767-25789833)
chr1 (133-199)||(39930461-39930527)
chr1 (134-186)||(31806759-31806811)
chr1 (133-196)||(5806293-5806356)
chr1 (132-175)||(38519063-38519106)
chr1 (128-199)||(51445077-51445148)
chr1 (133-199)||(2430500-2430566)
chr1 (133-199)||(2632856-2632922)
chr1 (133-199)||(3572567-3572633)
chr1 (133-199)||(5518506-5518572)
chr1 (133-199)||(9831872-9831938)
chr1 (133-199)||(20260088-20260154)
chr1 (133-199)||(29091670-29091736)
chr1 (137-199)||(30241013-30241075)
chr1 (133-199)||(47037461-47037527)
chr1 (133-199)||(52630777-52630843)
chr1 (137-199)||(52699472-52699534)
chr1 (133-186)||(16257010-16257063)
chr1 (134-199)||(36361786-36361851)
chr1 (142-186)||(11014452-11014496)
chr1 (133-193)||(35187466-35187526)
chr1 (135-199)||(38964683-38964747)
chr1 (133-193)||(47677653-47677712)
[»] chr3 (17 HSPs)
chr3 (134-199)||(12930945-12931009)
chr3 (133-199)||(40584603-40584669)
chr3 (133-199)||(31435925-31435991)
chr3 (133-199)||(11239122-11239188)
chr3 (133-199)||(28124438-28124504)
chr3 (133-199)||(44952311-44952377)
chr3 (133-185)||(6831959-6832011)
chr3 (133-177)||(38140366-38140410)
chr3 (133-176)||(28770212-28770255)
chr3 (133-199)||(20297796-20297862)
chr3 (133-199)||(24574578-24574644)
chr3 (133-199)||(26849025-26849091)
chr3 (133-199)||(40908268-40908334)
chr3 (133-199)||(43132159-43132225)
chr3 (133-199)||(47114859-47114925)
chr3 (134-199)||(48339760-48339825)
chr3 (131-199)||(1099201-1099269)
[»] chr7 (21 HSPs)
chr7 (133-185)||(45440925-45440977)
chr7 (142-198)||(43445894-43445950)
chr7 (133-185)||(30685994-30686046)
chr7 (133-199)||(11329996-11330062)
chr7 (133-199)||(27213857-27213923)
chr7 (133-199)||(39554186-39554252)
chr7 (133-199)||(41632366-41632432)
chr7 (133-199)||(43949248-43949314)
chr7 (133-185)||(37534105-37534157)
chr7 (133-204)||(6204436-6204502)
chr7 (133-199)||(18824148-18824215)
chr7 (136-199)||(25924642-25924705)
chr7 (133-199)||(34930467-34930534)
chr7 (128-199)||(45265045-45265116)
chr7 (133-199)||(16825356-16825422)
chr7 (133-199)||(27419226-27419292)
chr7 (133-199)||(33378845-33378911)
chr7 (133-199)||(40212892-40212958)
chr7 (133-199)||(48314125-48314191)
chr7 (134-199)||(48341365-48341430)
chr7 (133-177)||(6656226-6656270)
[»] chr5 (19 HSPs)
chr5 (135-187)||(41783624-41783676)
chr5 (142-199)||(40275766-40275823)
chr5 (133-193)||(43346897-43346957)
chr5 (132-177)||(20962615-20962660)
chr5 (133-194)||(35602825-35602886)
chr5 (137-176)||(3913206-3913245)
chr5 (133-186)||(6930660-6930713)
chr5 (135-199)||(6091718-6091782)
chr5 (133-199)||(555708-555774)
chr5 (133-199)||(4765562-4765628)
chr5 (133-199)||(12970532-12970598)
chr5 (133-199)||(14206823-14206889)
chr5 (133-199)||(18412212-18412278)
chr5 (133-199)||(19065507-19065573)
chr5 (133-199)||(36703877-36703943)
chr5 (133-199)||(42012181-42012247)
chr5 (134-199)||(11855658-11855723)
chr5 (133-177)||(26637045-26637089)
chr5 (133-177)||(29543017-29543061)
[»] scaffold0702 (1 HSPs)
scaffold0702 (133-199)||(3567-3633)
[»] scaffold0662 (1 HSPs)
scaffold0662 (133-199)||(4471-4537)
[»] chr6 (7 HSPs)
chr6 (133-199)||(8029336-8029402)
chr6 (138-196)||(21008031-21008089)
chr6 (133-199)||(7053572-7053638)
chr6 (133-186)||(3869521-3869574)
chr6 (136-185)||(8314930-8314979)
chr6 (133-177)||(6705767-6705811)
chr6 (133-177)||(10849785-10849829)
[»] scaffold0006 (1 HSPs)
scaffold0006 (133-199)||(201928-201994)


Alignment Details
Target: chr4 (Bit Score: 130; Significance: 1e-67; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 30790713 - 30790522
Alignment:
Q  1 cagtttcaatttgaagaataatttgacactctgatctaattctctctcaaatttttaagttgattgctaggtatgagggtattaaatgacttctcaaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30790713 cagtttcaatttgaagaataatttgacactctgatctaattctctctcaaatttttaagttgattgctaggtatgagggtattaaatgacttctcaaaat 30790614  T
Q  101 ttgcaattaagaacaataaattcaattaaaaag--tgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctat 198  Q
    ||||||||||||||||||||||||||| |||||   ||| |||         | ||||||||||||||| |||||||||||||||||| |||||| ||||    
T  30790613 ttgcaattaagaacaataaattcaattgaaaaggaagtgatta---------aaatttgtagattcttgcgaataaaatcataaaaatacatatgtctat 30790523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 26165437 - 26165381
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgca 189  Q
    |||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||    
T  26165437 gtgtgtttgtttcatgttatatttgtagattcctgagaataaaatcataaaaatgca 26165381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 35999759 - 35999693
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||| ||||||||||| ||| ||||| |||||||||||    
T  35999759 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatg 35999693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 10400810 - 10400873
Alignment:
Q  136 tgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| ||| ||||| ||||| |||||    
T  10400810 tgtttgtttcaagttatatttgttgatttttgggaataaaatgatagaaatgtatatgtctatg 10400873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 41744221 - 41744288
Alignment:
Q  132 agtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||||||||||||||||| |||| ||||   ||||||||||| ||| ||||| |||||||||||    
T  41744221 agtgtgtttatttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatg 41744288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 25932514 - 25932448
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| ||||| | |||||||||| ||| ||||| |||||||||||    
T  25932514 gtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatg 25932448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 40435973 - 40435907
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  40435973 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 40435907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 47670435 - 47670369
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| ||||| ||| |||||||| ||| ||||| |||||||||||    
T  47670435 gtgtgtttgtttcaagttataattgttgattcctggaaataaaatgatagaaatgtatatgcctatg 47670369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 48879398 - 48879332
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  48879398 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 48879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 23173061 - 23173021
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaata 173  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  23173061 gtgtgtttgtttcaagttatctttgtagattcttgggaata 23173021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 31937871 - 31937923
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaa 185  Q
    |||||||| |||||||||||| ||||||||| |||  ||||||||||||||||    
T  31937871 gtgtgtttgtttcaagttataattgtagatttttgaaaataaaatcataaaaa 31937923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 18405236 - 18405302
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  | ||||||||| ||| ||||| |||||||||||    
T  18405236 gtgtgtttgtttcaagttataattgttgattcccgagaataaaattatagaaatgtatatgcctatg 18405302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 23686860 - 23686794
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||  |||||||||||    
T  23686860 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatg 23686794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 27555483 - 27555417
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||| ||||||||||| |||  |||| ||||| |||||    
T  27555483 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgtctatg 27555417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 39835309 - 39835375
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||| ||||    
T  39835309 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcatatg 39835375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 45596337 - 45596275
Alignment:
Q  137 gtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||| |||||||||||| |||| |||| | ||||||||||| ||| ||||| |||||||||||    
T  45596337 gtttgtttcaagttataattgttgattttcgggaataaaatgatagaaatgtatatgcctatg 45596275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 45747798 - 45747864
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  45747798 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 45747864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 8322308 - 8322252
Alignment:
Q  143 ttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    ||||||||||| |||| ||||| |||||||||||| ||| ||||| ||||| |||||    
T  8322308 ttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgtctatg 8322252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 5e-18; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 25899701 - 25899635
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| || |||||    
T  25899701 gtgtgtttgtttcaaattatatttgtagattcctgggaataaaatcataaaaatgcatgtgtctatg 25899635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 42755936 - 42755870
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| ||||| |||||||||||| ||| ||||| |||||||||||    
T  42755936 gtgtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatg 42755870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 12710714 - 12710648
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  12710714 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 12710648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 26062213 - 26062147
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||| ||||||||||| ||| ||||| |||| ||||||    
T  26062213 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatattcctatg 26062147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 32660935 - 32661001
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| ||||| |||||||||||| |||  |||| |||||||||||    
T  32660935 gtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatg 32661001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 33444628 - 33444694
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| ||||||||||||||||| ||||| || ||||||||| ||||||||  ||||| |||||    
T  33444628 gtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgataaaaatatatatgtctatg 33444694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 38132739 - 38132805
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||| ||||||||||| ||| ||||| ||||| |||||    
T  38132739 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgtctatg 38132805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 5020491 - 5020536
Alignment:
Q  132 agtgtgtttatttcaagttatatttgtagattcttgggaataaaat 177  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  5020491 agtgtgtttgtttcaagttatatttgttgattcatgggaataaaat 5020536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 43871971 - 43872020
Alignment:
Q  136 tgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaa 185  Q
    ||||| |||||||||||| || ||||||||||| ||||||||||||||||    
T  43871971 tgtttgtttcaagttataattatagattcttggaaataaaatcataaaaa 43872020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 193
Target Start/End: Complemental strand, 7931306 - 7931248
Alignment:
Q  135 gtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatg 193  Q
    |||||| |||||||||||| |||| ||||| |||||||||||| ||| ||||| |||||    
T  7931306 gtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatg 7931248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 10896219 - 10896285
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||   |||||||||| ||| ||||| |||||||||||    
T  10896219 gtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatg 10896285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 18726621 - 18726687
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  18726621 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 18726687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 21137134 - 21137200
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| ||| ||||||||||||| ||||| || ||||||||| ||| ||||  |||||||||||    
T  21137134 gtgtgtttgtttgaagttatatttgttgattcctgagaataaaataatagaaatatatatgcctatg 21137200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 15227029 - 15226973
Alignment:
Q  137 gtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatg 193  Q
    |||| |||||||||||||| |||||||| |  ||||||||||||| |||| ||||||    
T  15227029 gtttgtttcaagttatattcgtagattcctctgaataaaatcatataaatacatatg 15226973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 5e-18; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 25455093 - 25455027
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| ||||||||||||||||||||||| || |||||||||||||||||| |||||| |||||    
T  25455093 gtgtgtttgtttcaagttatatttgtagattcctgagaataaaatcataaaaatacatatgtctatg 25455027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 17542425 - 17542373
Alignment:
Q  146 aagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctat 198  Q
    |||||||||||||||| || || ||||||||||||||||||||||||||||||    
T  17542425 aagttatatttgtagagtcctgtgaataaaatcataaaaatgcatatgcctat 17542373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 39819763 - 39819699
Alignment:
Q  135 gtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||| ||||||||||||||||||||||| ||  ||||||||||| ||||| ||||||||||||    
T  39819763 gtgtttgtttcaagttatatttgtagattcctgaaaataaaatcatgaaaatacatatgcctatg 39819699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 40570089 - 40570037
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaa 185  Q
    |||||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  40570089 gtgtgtttgtttcaagttataattgtagattcctgggaataaaatcataaaaa 40570037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 7007642 - 7007598
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaat 177  Q
    |||||||||||||||||||||||||| |||||||||| |||||||    
T  7007642 gtgtgtttatttcaagttatatttgttgattcttggggataaaat 7007598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 9733848 - 9733914
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  9733848 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 9733914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 41750598 - 41750532
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| ||||| | |||||||||| ||| ||||| |||||||||||    
T  41750598 gtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatg 41750532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 18713660 - 18713725
Alignment:
Q  134 tgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    ||||||| ||||||||||||||||| ||||| ||| |||||||| ||| ||||  |||||||||||    
T  18713660 tgtgtttgtttcaagttatatttgttgattcatggtaataaaatgatataaatatatatgcctatg 18713725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 14832877 - 14832813
Alignment:
Q  135 gtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||| ||||||||||||||||| ||||| | |||||||||| ||| ||||  |||||||||||    
T  14832877 gtgtttgtttcaagttatatttgttgattcctaggaataaaatgatagaaatatatatgcctatg 14832813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 5770115 - 5770178
Alignment:
Q  136 tgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    ||||| |||||||||||| |||| ||||| |||||||||||| |||  |||| |||||||||||    
T  5770115 tgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgcctatg 5770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 37192592 - 37192525
Alignment:
Q  132 agtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    ||||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| ||||| |||||    
T  37192592 agtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatg 37192525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 346347 - 346413
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  346347 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 346413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 34356702 - 34356768
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| ||||| |||||    
T  34356702 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatg 34356768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 39995133 - 39995199
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  39995133 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 39995199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 40950861 - 40950927
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||| ||||||||||| ||| ||||  |||||| ||||    
T  40950861 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatatatatgcttatg 40950927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 24499512 - 24499456
Alignment:
Q  130 aaagtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaat 186  Q
    ||||||||||| ||||||||||||||||| ||||| | | |||||||| ||| ||||    
T  24499512 aaagtgtgtttgtttcaagttatatttgttgattcatagaaataaaatgatagaaat 24499456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 28311701 - 28311765
Alignment:
Q  135 gtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||| ||||||||||||||||| |||||  ||||||||||| |||  |||  |||||||||||    
T  28311701 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaatatatatgcctatg 28311765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 5e-18; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 13931886 - 13931952
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| ||| ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||    
T  13931886 gtgtgtttgtttgaagttatatttgtagattcctaggaataaaatcataaaaatacatatgcctatg 13931952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 1227881 - 1227949
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatgctt 202  Q
    |||||||| ||| |||||||||| |||||||||||  ||||||||||||||||| |||||||||||||||    
T  1227881 gtgtgttttttt-aagttatattcgtagattcttgaaaataaaatcataaaaatacatatgcctatgctt 1227949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 6911563 - 6911497
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||| ||||||||||| |||| |||| |||||||||||    
T  6911563 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataagaatgtatatgcctatg 6911497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 48916024 - 48916090
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||||||||||||||||||||| |||||  | ||||||||| ||| ||||| |||||||||||    
T  48916024 gtgtgtttatttcaagttatatttgttgattccagagaataaaatgatagaaatgtatatgcctatg 48916090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 49822919 - 49822985
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||| ||||||||||| ||| ||||| |||||||||||    
T  49822919 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatg 49822985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 6978840 - 6978774
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  6978840 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 6978774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 9115907 - 9115841
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  9115907 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 9115841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 25789833 - 25789767
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  25789833 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 25789767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 39930527 - 39930461
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  39930527 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 39930461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 31806759 - 31806811
Alignment:
Q  134 tgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaat 186  Q
    ||||||| ||||||||||||||||||||||| || ||||||||| ||| ||||    
T  31806759 tgtgtttgtttcaagttatatttgtagattcctgagaataaaatgatagaaat 31806811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 5806293 - 5806356
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcct 196  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| ||||||||    
T  5806293 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcct 5806356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 175
Target Start/End: Original strand, 38519063 - 38519106
Alignment:
Q  132 agtgtgtttatttcaagttatatttgtagattcttgggaataaa 175  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||    
T  38519063 agtgtgtttgtttcaagttatatttgtagatttttggaaataaa 38519106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 51445077 - 51445148
Alignment:
Q  128 aaaaagtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    ||||| ||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||| ||||||    
T  51445077 aaaaattgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatacctatg 51445148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 2430566 - 2430500
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  2430566 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 2430500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 2632922 - 2632856
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  2632922 gtgtgtttgtttcaagttataattgttgattcccgggaataaaataataggaatgtatatgcctatg 2632856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 3572567 - 3572633
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  3572567 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 3572633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 5518506 - 5518572
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| ||||||||||||||||| |||||   |||||||||| ||| ||||  |||||||||||    
T  5518506 gtgtgtttgtttcaagttatatttgttgattcccaggaataaaatgatagaaatatatatgcctatg 5518572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 9831872 - 9831938
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||   |||||||||| ||| ||||| |||||||||||    
T  9831872 gtgtgtttgtttcaagttataattgttgattcccaggaataaaatgatagaaatgtatatgcctatg 9831938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 20260088 - 20260154
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| ||||| |||||||||||| ||   |||| |||||||||||    
T  20260088 gtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatg 20260154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 29091736 - 29091670
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| ||||||||||||||||| ||||| ||  |||||||| ||||||||  ||||| |||||    
T  29091736 gtgtgtttgtttcaagttatatttgttgattcctgataataaaatgataaaaatatatatgtctatg 29091670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 30241075 - 30241013
Alignment:
Q  137 gtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||| ||||||||||||||||| |||| |||| |||||||| ||| ||||  |||||||||||    
T  30241075 gtttgtttcaagttatatttgttgatttttggtaataaaatgatagaaatatatatgcctatg 30241013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 47037527 - 47037461
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||  |||||||||||    
T  47037527 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatg 47037461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 52630843 - 52630777
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| ||||| |||||||||||| |||  |||| ||||| |||||    
T  52630843 gtgtgtttgtttcaagttataattgttgattcctgggaataaaatgataggaatgtatatgtctatg 52630777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 52699472 - 52699534
Alignment:
Q  137 gtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||| |||||||||||||| |||||||| |||||||||||| |||  ||| || |||||||||    
T  52699472 gtttgtttcaagttatattcgtagattcctgggaataaaatgataggaatacacatgcctatg 52699534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 16257010 - 16257063
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaat 186  Q
    |||||||| ||| |||||||||||||| |||  | |||||||||||||||||||    
T  16257010 gtgtgtttgtttgaagttatatttgtatatttcttggaataaaatcataaaaat 16257063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 36361851 - 36361786
Alignment:
Q  134 tgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    ||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  36361851 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 36361786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 11014452 - 11014496
Alignment:
Q  142 tttcaagttatatttgtagattcttgggaataaaatcataaaaat 186  Q
    ||||||||||||| ||||||||| |||||||||||| ||| ||||    
T  11014452 tttcaagttatatatgtagattcctgggaataaaatgatagaaat 11014496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 35187526 - 35187466
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatg 193  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||    
T  35187526 gtgtgtttttttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatg 35187466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 38964683 - 38964747
Alignment:
Q  135 gtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||| ||||    
T  38964683 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcttatg 38964747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 47677712 - 47677653
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatg 193  Q
    |||||||| ||||  ||||||||||| |||||  |||||||||||||||||||| ||||||    
T  47677712 gtgtgtttgtttcccgttatatttgtggattcc-gggaataaaatcataaaaatacatatg 47677653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 12930945 - 12931009
Alignment:
Q  134 tgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    ||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  12930945 tgtgtttgtttcaagttatatt-gtagattgttgggaataaaatcataaaaatgcatatggctatg 12931009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 40584669 - 40584603
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||| ||| ||| ||||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  40584669 gtgtatttgttttaagttatatttgtagattcctgagaataaaatcataaaaatgcatatgtctatg 40584603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 31435925 - 31435991
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| ||||||||||||||||| ||||| || ||||||||| ||| ||||| |||||||||||    
T  31435925 gtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgatagaaatgtatatgcctatg 31435991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 11239122 - 11239188
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  11239122 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 11239188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 28124438 - 28124504
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||| ||||||||||| |||  |||| |||||||||||    
T  28124438 gtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataggaatgtatatgcctatg 28124504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 44952377 - 44952311
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  44952377 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 44952311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 6831959 - 6832011
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaa 185  Q
    |||||||| |||||| |||||||||||||||| ||| |||||||||| |||||    
T  6831959 gtgtgtttgtttcaacttatatttgtagattcctggaaataaaatcacaaaaa 6832011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 38140366 - 38140410
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaat 177  Q
    |||||||||||| ||||||||||||||||||| || |||||||||    
T  38140366 gtgtgtttattttaagttatatttgtagattcatgagaataaaat 38140410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 28770212 - 28770255
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaa 176  Q
    |||||||| |||||||||||||| |||||||| |||||||||||    
T  28770212 gtgtgtttctttcaagttatattcgtagattcctgggaataaaa 28770255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 20297862 - 20297796
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  || |||||||| ||| ||||| |||||||||||    
T  20297862 gtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgcctatg 20297796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 24574644 - 24574578
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  24574644 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 24574578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 26849091 - 26849025
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  26849091 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 26849025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 40908334 - 40908268
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  40908334 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 40908268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 43132159 - 43132225
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| ||||||||||||||||| |||||| | ||||||||| |||  |||  |||||||||||    
T  43132159 gtgtgtttgtttcaagttatatttgttgattctcgagaataaaataataggaatatatatgcctatg 43132225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 47114859 - 47114925
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| ||||| |||||||||||| ||   |||| |||||||||||    
T  47114859 gtgtgtttgtttcaagttataattgttgattcctgggaataaaatgattggaatgtatatgcctatg 47114925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 48339760 - 48339825
Alignment:
Q  134 tgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    ||||||| |||||||||||| |||| ||||   ||||||||||| ||| ||||| |||||||||||    
T  48339760 tgtgtttgtttcaagttataattgttgatttccgggaataaaatgatataaatgtatatgcctatg 48339825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 1099269 - 1099201
Alignment:
Q  131 aagtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||||| ||| |||||||| |||| |||||  ||||||||||| ||| ||||| |||| ||||||    
T  1099269 aagtgtgtttgttttaagttataattgttgattcccgggaataaaatgatagaaatgtatatccctatg 1099201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 45440977 - 45440925
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaa 185  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  45440977 gtgtgtttgtttcaagttataattgtagattcttgggaataaaatcataaaaa 45440925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 43445894 - 43445950
Alignment:
Q  142 tttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctat 198  Q
    ||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||    
T  43445894 tttcaagttatatttatagattcttgcgaataaaattataaaaatgtatatgcctat 43445950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 30685994 - 30686046
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaa 185  Q
    |||||||| |||||||||||| |||||||||| | ||||||||||||||||||    
T  30685994 gtgtgtttgtttcaagttataattgtagattcgttggaataaaatcataaaaa 30686046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 11330062 - 11329996
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  11330062 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 11329996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 27213857 - 27213923
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  27213857 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 27213923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 39554252 - 39554186
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  39554252 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 39554186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 41632366 - 41632432
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| ||||| || ||||||||| ||| ||||| |||||||||||    
T  41632366 gtgtgtttgtttcaagttataattgttgattcctgagaataaaatgatagaaatgtatatgcctatg 41632432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 43949314 - 43949248
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  43949314 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 43949248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 37534105 - 37534157
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaa 185  Q
    |||||||| ||||| |||||| |||||||||| ||| ||||||||||||||||    
T  37534105 gtgtgtttgtttcatgttataattgtagattcctggaaataaaatcataaaaa 37534157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 6204502 - 6204436
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatgcttct 204  Q
    |||||||| ||| || ||||||||||||||||     ||||||||||||||||||||||||| |||| ||||    
T  6204502 gtgtgttttttttaaattatatttgtagattc-----aataaaatcataaaaatgcatatgcttatgtttct 6204436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 18824215 - 18824148
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcata-aaaatgcatatgcctatg 199  Q
    |||||||| ||||||||| ||||||| |||| ||||||||||||| ||| |||||  |||||||||||    
T  18824215 gtgtgtttgtttcaagttgtatttgttgatttttgggaataaaatgatagaaaatatatatgcctatg 18824148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 25924642 - 25924705
Alignment:
Q  136 tgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    ||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  25924642 tgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 25924705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 34930467 - 34930534
Alignment:
Q  133 gtgtgtttatttcaa-gttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||| |||||| |||| ||||| |||||||||||| ||| ||||| |||||||||||    
T  34930467 gtgtgtttgtttcaaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatg 34930534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 199
Target Start/End: Original strand, 45265045 - 45265116
Alignment:
Q  128 aaaaagtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||| |||||||| |||||||||||| |||| |||||| ||||||||||| ||   |||| |||||||||||    
T  45265045 aaaaggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgattggaatgtatatgcctatg 45265116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 16825356 - 16825422
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| ||||  |||| | |||||||||| ||| ||||| |||||||||||    
T  16825356 gtgtgtttgtttcaagttataattgttaattcctaggaataaaatgatagaaatgtatatgcctatg 16825422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 27419226 - 27419292
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||  |||||  ||||||||||| ||| ||||| |||||||||||    
T  27419226 gtgtgtttgtttcaagttataattgctgattcccgggaataaaatgatagaaatgtatatgcctatg 27419292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 33378911 - 33378845
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  33378911 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 33378845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 40212958 - 40212892
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  40212958 gtgtgtttgtttcaagttataattgttgattcgcgggaataaaatgataggaatgtatatgcctatg 40212892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 48314191 - 48314125
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  48314191 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 48314125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 48341430 - 48341365
Alignment:
Q  134 tgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    ||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  48341430 tgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 48341365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 6656226 - 6656270
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaat 177  Q
    |||||||| ||||||||||||||||| |||| |||| ||||||||    
T  6656226 gtgtgtttgtttcaagttatatttgttgatttttggaaataaaat 6656270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 8e-17; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 41783624 - 41783676
Alignment:
Q  135 gtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatg 187  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  41783624 gtgtttatttcaagttatatttatagattcttgggattaaaatcataaaaatg 41783676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 40275766 - 40275823
Alignment:
Q  142 tttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| |||||| |||||    
T  40275766 tttcaagttatatttgtagatttttgggaataaaattataaaaatacatatgtctatg 40275823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 43346897 - 43346957
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatg 193  Q
    |||||||| ||||||||||||||||||||||| ||  ||||||||||||||||| ||||||    
T  43346897 gtgtgtttgtttcaagttatatttgtagattcctgaaaataaaatcataaaaatacatatg 43346957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 20962660 - 20962615
Alignment:
Q  132 agtgtgtttatttcaagttatatttgtagattcttgggaataaaat 177  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||    
T  20962660 agtgtgtttgtttcaagttatattcgtagattcttgggaataaaat 20962615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 35602825 - 35602886
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgc 194  Q
    |||||||| ||| |||||||||||||||||| || |||| ||||||| ||||||||||||||    
T  35602825 gtgtgtttgtttgaagttatatttgtagatttttcggaaaaaaatcagaaaaatgcatatgc 35602886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 176
Target Start/End: Original strand, 3913206 - 3913245
Alignment:
Q  137 gtttatttcaagttatatttgtagattcttgggaataaaa 176  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  3913206 gtttatttcaagttatattcgtagattcttgggaataaaa 3913245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 6930713 - 6930660
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaat 186  Q
    |||||||||||||||||||||||||| ||||| || ||||||||| ||| ||||    
T  6930713 gtgtgtttatttcaagttatatttgttgattcctgagaataaaatgatagaaat 6930660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 6091782 - 6091718
Alignment:
Q  135 gtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  6091782 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcctatg 6091718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 555708 - 555774
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| ||||| |||||    
T  555708 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgtctatg 555774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 4765562 - 4765628
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  4765562 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 4765628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 12970532 - 12970598
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  12970532 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 12970598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 14206823 - 14206889
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| ||||   ||||||||||| ||| ||||| |||||||||||    
T  14206823 gtgtgtttgtttcaagttataattgttgatttccgggaataaaatgatagaaatgtatatgcctatg 14206889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 18412278 - 18412212
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| || | ||||| |||||||||||| |||  |||| |||||||||||    
T  18412278 gtgtgtttgtttcaagttataattattgattcctgggaataaaatgataggaatgtatatgcctatg 18412212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 19065507 - 19065573
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  19065507 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 19065573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 36703943 - 36703877
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||| | ||||||||||| ||| ||||| ||||| |||||    
T  36703943 gtgtgtttgtttcaagttataattgttgattatcgggaataaaatgatagaaatgtatatgtctatg 36703877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 42012181 - 42012247
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| ||| ||| ||||||||| |||||| ||||||||||| ||| |||| |||||| |||||    
T  42012181 gtgtgtttgtttgaagctatatttgttgattctcgggaataaaatgatagaaatacatatgtctatg 42012247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 11855658 - 11855723
Alignment:
Q  134 tgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    ||||||| |||||||||||| |||| ||||| || ||||||||| |||  |||| |||||||||||    
T  11855658 tgtgtttgtttcaagttataattgttgattcctgagaataaaatgataggaatgtatatgcctatg 11855723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 26637045 - 26637089
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaat 177  Q
    |||||||| ||||||||||||||||| ||||  ||||||||||||    
T  26637045 gtgtgtttgtttcaagttatatttgttgattaatgggaataaaat 26637089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 29543017 - 29543061
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaat 177  Q
    |||||||| |||||||||||| |||| ||||| ||||||||||||    
T  29543017 gtgtgtttgtttcaagttataattgttgattcctgggaataaaat 29543061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 3567 - 3633
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| ||||||||||||||||||||||  | |||||||||| ||||||||  |||||||||||    
T  3567 gtgtgtttgtttcaagttatatttgtagatttctaggaataaaattataaaaatatatatgcctatg 3633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 4537 - 4471
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| ||||||||||||||||||||||  | |||||||||| ||||||||  |||||||||||    
T  4537 gtgtgtttgtttcaagttatatttgtagatttctaggaataaaattataaaaatatatatgcctatg 4471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000007; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 8029402 - 8029336
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| ||| ||||| |||||||||||    
T  8029402 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 8029336  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 21008031 - 21008089
Alignment:
Q  138 tttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcct 196  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||||||  ||||||||    
T  21008031 tttatttcaagttatatttgttgatttctgggaataaaatgataaaaatatatatgcct 21008089  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 7053572 - 7053638
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  7053572 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 7053638  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 3869574 - 3869521
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaat 186  Q
    |||||||| ||||||||||| ||||||||||  |||||||||||| ||| ||||    
T  3869574 gtgtgtttgtttcaagttatttttgtagatttctgggaataaaatgatagaaat 3869521  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 8314979 - 8314930
Alignment:
Q  136 tgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaa 185  Q
    ||||| |||||||||||| || ||||||| || |||||||||||||||||    
T  8314979 tgtttgtttcaagttataattctagattcatgagaataaaatcataaaaa 8314930  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 6705767 - 6705811
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaat 177  Q
    |||||||| ||||||||||||||||| ||||| | ||||||||||    
T  6705767 gtgtgtttgtttcaagttatatttgttgattcattggaataaaat 6705811  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 10849785 - 10849829
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaat 177  Q
    |||||||| ||||||||||| ||| ||||||| ||||||||||||    
T  10849785 gtgtgtttgtttcaagttatttttatagattcctgggaataaaat 10849829  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 201994 - 201928
Alignment:
Q  133 gtgtgtttatttcaagttatatttgtagattcttgggaataaaatcataaaaatgcatatgcctatg 199  Q
    |||||||| |||||||||||| |||| |||||  ||||||||||| |||  |||| |||||||||||    
T  201994 gtgtgtttgtttcaagttataattgttgattcccgggaataaaatgataggaatgtatatgcctatg 201928  T

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