View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3820_high_158 (Length: 235)

Name: NF3820_high_158
Description: NF3820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3820_high_158
NF3820_high_158
[»] chr3 (25 HSPs)
chr3 (1-223)||(28036607-28036829)
chr3 (5-222)||(28003368-28003585)
chr3 (1-222)||(27919518-27919739)
chr3 (1-215)||(27979646-27979860)
chr3 (8-149)||(28151113-28151254)
chr3 (98-222)||(27459552-27459676)
chr3 (5-99)||(17745303-17745397)
chr3 (5-99)||(19046623-19046717)
chr3 (2-80)||(26114055-26114133)
chr3 (101-155)||(8539829-8539883)
chr3 (1-103)||(11420203-11420305)
chr3 (98-156)||(27390826-27390884)
chr3 (1-103)||(27459703-27459804)
chr3 (98-163)||(27377540-27377605)
chr3 (4-88)||(28149092-28149176)
chr3 (98-218)||(11420332-11420452)
chr3 (2-77)||(26202505-26202583)
chr3 (98-148)||(18025265-18025315)
chr3 (5-95)||(28184960-28185050)
chr3 (98-155)||(26179552-26179609)
chr3 (102-155)||(26235983-26236036)
chr3 (100-152)||(28005112-28005164)
chr3 (104-204)||(1366846-1366945)
chr3 (13-76)||(26128815-26128878)
chr3 (98-155)||(26129502-26129559)
[»] chr2 (1 HSPs)
chr2 (98-163)||(22392469-22392534)
[»] scaffold0257 (1 HSPs)
scaffold0257 (1-88)||(18509-18596)
[»] scaffold0043 (1 HSPs)
scaffold0043 (98-157)||(53883-53942)
[»] scaffold1142 (1 HSPs)
scaffold1142 (98-152)||(1332-1386)
[»] chr7 (1 HSPs)
chr7 (1-95)||(8692895-8692989)


Alignment Details
Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28036607 - 28036829
Alignment:
Q  1 gtccacttggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatatagagctaaaaaggaaacatta 100  Q
    ||||||||||| ||||||||||||| |||||| |||||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  28036607 gtccacttggagaaactgatgctaccgtcaaagcttctccagaaaataacgtaatatagtaccacctcattgtgcatataaagctaaaaatgaaacatta 28036706  T
Q  101 aaaatatgctgcaactaatttatattttcattttatgcaatcagttggagggttcaatgtcagnnnnnnntgtagcatcaactttgtcgaccatttcagg 200  Q
    |||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||  ||||       ||||||||||||||  || || |||||||     
T  28036707 aaaatatgatgcaactaatttacattttcatgttatgcaatcagttggagggttcaacatcagaaaaaaatgtagcatcaacttattccacaatttcaga 28036806  T
Q  201 aacaacaaggaatgagctacctg 223  Q
    |||||||||||||||||||||||    
T  28036807 aacaacaaggaatgagctacctg 28036829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 5 - 222
Target Start/End: Original strand, 28003368 - 28003585
Alignment:
Q  5 acttggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatatagagctaaaaaggaaacattaaaaa 104  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| | ||||||| ||||| |||||||    
T  28003368 acttggagaaactgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcatcgtgcatataaatctaaaaaagaaacgttaaaaa 28003467  T
Q  105 tatgctgcaactaatttatattttcattttatgcaatcagttggagggttcaatgtcagnnnnnnntgtagcatcaactttgtcgaccatttcaggaaca 204  Q
    |||| ||||| ||||||| |||||||| |||||||||||||||||||||||||  ||||       |||||||||||||||||| |||||||||| ||||    
T  28003468 tatgttgcaagtaatttacattttcatgttatgcaatcagttggagggttcaacatcagaaaaaaatgtagcatcaactttgtccaccatttcagaaaca 28003567  T
Q  205 acaaggaatgagctacct 222  Q
    |||| |||||||||||||    
T  28003568 acaaagaatgagctacct 28003585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 27919518 - 27919739
Alignment:
Q  1 gtccacttggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatatagagctaaaaaggaaacatta 100  Q
    ||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||||||    
T  27919518 gtccacttggagaaattgatactaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcattgtgaatataaagctaaaaaagaaacatta 27919617  T
Q  101 aaaatatgctgcaactaatttatattttcattttatgcaatcagttggagggttcaatgtcagnnnnnnntgtagcatcaactttgtcgaccatttcagg 200  Q
    |||||||| ||||||||||||| |||||| | ||||||||||||||||||||||||| |||||        || |||||||||||||| ||||||| ||     
T  27919618 aaaatatgttgcaactaatttacattttcttgttatgcaatcagttggagggttcaacgtcagaaacaaaagtcgcatcaactttgtcaaccattttaga 27919717  T
Q  201 aacaacaaggaatgagctacct 222  Q
    |||| ||| |||||||||||||    
T  27919718 aacagcaaagaatgagctacct 27919739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 27979646 - 27979860
Alignment:
Q  1 gtccacttggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatatagagctaaaaaggaaacatta 100  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||| ||||| ||||||||| |||||||||    
T  27979646 gtccacttggagaaactgatgctaccgtcaaaccttctccagaaaataatgtaatatagtaccacctcattgtgaatataaagctaaaaaagaaacatta 27979745  T
Q  101 aaaatatgctgcaactaatttatattttcattttatgcaatcagttggagggttcaatgtcagnnnnnnntgtagcatcaactttgtcgaccatttcagg 200  Q
    |||||||| ||||||||||||| |||||| | ||||||||||||||||||||||||| |||||        || |||||||||||||| ||||||| ||     
T  27979746 aaaatatgttgcaactaatttacattttcttgttatgcaatcagttggagggttcaacgtcagaaacaaaagtcgcatcaactttgtcaaccattttaga 27979845  T
Q  201 aacaacaaggaatga 215  Q
    |||| ||| ||||||    
T  27979846 aacagcaaagaatga 27979860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 28151113 - 28151254
Alignment:
Q  8 tggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatatagagctaaaaaggaaacattaaaaatat 107  Q
    |||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| ||||| ||||||||||    
T  28151113 tggagaaattgatgctaccgtcaaaccttctcaagaaaataatgtaatatagtaccacctcattgtgcatataaatctaaaaaagaaacgttaaaaatat 28151212  T
Q  108 gctgcaactaatttatattttcattttatgcaatcagttgga 149  Q
    | ||||||||||||| |||||||| |||||||||||||||||    
T  28151213 gttgcaactaatttacattttcatgttatgcaatcagttgga 28151254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 222
Target Start/End: Complemental strand, 27459676 - 27459552
Alignment:
Q  98 ttaaaaatatgctgcaactaatttatattttcattttatgcaatcagttggagggttcaatgtcagnnnnnnntgtagcatcaactttgtcgaccatttc 197  Q
    ||||||||| | ||||||||||||| |||||||| |||||||| |||||||||||||||| |||||       |||||||||||||||||||||||||||    
T  27459676 ttaaaaataagttgcaactaatttacattttcatgttatgcaagcagttggagggttcaacgtcagaaaaaaatgtagcatcaactttgtcgaccatttc 27459577  T
Q  198 aggaacaacaaggaatgagctacct 222  Q
    || ||||||||||||||||||||||    
T  27459576 agaaacaacaaggaatgagctacct 27459552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 17745397 - 17745303
Alignment:
Q  5 acttggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatatagagctaaaaaggaaacatt 99  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||  |||||   ||||||| ||||||||    
T  17745397 acttggagaaactgatgctaccgtcaaaccttctcaggaaaataatgtaatatagtaccacctcattgtttatataagactaaaaatgaaacatt 17745303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 19046717 - 19046623
Alignment:
Q  5 acttggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatatagagctaaaaaggaaacatt 99  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||  |||||   ||||||| ||||||||    
T  19046717 acttggagaaactgatgctaccgtcaaaccttctcaggaaaataatgtaatatagtaccacctcattgtttatataagactaaaaatgaaacatt 19046623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 26114133 - 26114055
Alignment:
Q  2 tccacttggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatata 80  Q
    |||||||||| |||||||| ||||  ||||||||||||||||| ||||||||||||||||| | |||||||||||||||    
T  26114133 tccacttggagaaactgatactaccatcaaaccttctcaagaagataatgtaatatagtaccatctcattgtgcatata 26114055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 155
Target Start/End: Complemental strand, 8539883 - 8539829
Alignment:
Q  101 aaaatatgctgcaactaatttatattttcattttatgcaatcagttggagggttc 155  Q
    ||||||||  |||||||||||| ||||||||||||||||||||||||||||||||    
T  8539883 aaaatatgacgcaactaatttacattttcattttatgcaatcagttggagggttc 8539829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 11420203 - 11420305
Alignment:
Q  1 gtccacttggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatatagagctaaaaaggaaacatta 100  Q
    ||||||||||  ||||||||||||| ||||||||||  || |||||||  |||||||||||| | ||||||||||||||| | ||||||| ||  |||||    
T  11420203 gtccacttggtgaaactgatgctaccgtcaaacctttgcaggaaaatacagtaatatagtaccatctcattgtgcatataaaactaaaaaagatgcatta 11420302  T
Q  101 aaa 103  Q
    |||    
T  11420303 aaa 11420305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 27390884 - 27390826
Alignment:
Q  98 ttaaaaatatgctgcaactaatttatattttcattttatgcaatcagttggagggttca 156  Q
    |||| |||||||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  27390884 ttaataatatgctgcaactaatttaaattttcatgttatgcaattagttggagggttca 27390826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 27459804 - 27459703
Alignment:
Q  1 gtccacttggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatatagagctaaaaaggaaacatta 100  Q
    ||||||||| | ||||||||||||  |||||||||||||| ||||||||||||||||| ||| |||| |||||| || || || |||| | |||||||||    
T  27459804 gtccacttgcagaaactgatgctagcgtcaaaccttctcaggaaaataatgtaatataataccaccttattgtgtat-taaagataaataagaaacatta 27459706  T
Q  101 aaa 103  Q
    |||    
T  27459705 aaa 27459703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 27377540 - 27377605
Alignment:
Q  98 ttaaaaatatgctgcaactaatttatattttcattttatgcaatcagttggagggttcaatgtcag 163  Q
    |||||||||| |||||||||||||||||||||||  |||||||| ||||||||| ||||| |||||    
T  27377540 ttaaaaatattctgcaactaatttatattttcatgctatgcaattagttggaggattcaacgtcag 27377605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 28149092 - 28149176
Alignment:
Q  4 cacttggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatatagagctaaa 88  Q
    |||||||| |||||||| || | |||||||||||||| | |||| ||||||||| |||| ||| ||||||||||||| |||||||    
T  28149092 cacttggagaaactgatactgccgtcaaaccttctcaggtaaatcatgtaatatcgtaccaccgcattgtgcatataaagctaaa 28149176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 218
Target Start/End: Original strand, 11420332 - 11420452
Alignment:
Q  98 ttaaaaatatgctgcaactaatttatattttcattttatgcaatcagttggagggttcaatgtcagnnnnnnntgtagcatcaactttgtcgaccatttc 197  Q
    ||||||||||| ||||||||||||| ||||||||  | |  |||||||| | |||||||| |||||       ||||||||||||| | || ||||||||    
T  11420332 ttaaaaatatgttgcaactaatttacattttcatcatgttaaatcagttcgtgggttcaacgtcagaaaaaaatgtagcatcaactctttccaccatttc 11420431  T
Q  198 aggaacaacaaggaatgagct 218  Q
    || |||||||| |||||||||    
T  11420432 agaaacaacaaagaatgagct 11420452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 26202583 - 26202505
Alignment:
Q  2 tccacttggacaaactgatgctactgtcaaaccttctcaagaaaataatgt---aatatagtacaacctcattgtgcat 77  Q
    ||||| |||| |||||||| ||||  ||||||||||||||||| |||||||   |||||||||||| ||||||||||||    
T  26202583 tccacctggagaaactgatactaccatcaaaccttctcaagaatataatgtaataatatagtacaatctcattgtgcat 26202505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 18025315 - 18025265
Alignment:
Q  98 ttaaaaatatgctgcaactaatttatattttcattttatgcaatcagttgg 148  Q
    |||||| |||||||||||||||||| ||||||||  |||||||||||||||    
T  18025315 ttaaaactatgctgcaactaatttacattttcatgctatgcaatcagttgg 18025265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 28184960 - 28185050
Alignment:
Q  5 acttggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatatagagctaaaaaggaaa 95  Q
    ||||||| || ||||| |||| |||||||||||||| | |||| ||||||| | |||| ||| | ||||||||||| ||||||||| ||||    
T  28184960 acttggagaacctgatactaccgtcaaaccttctcaggtaaatcatgtaatgtcgtaccaccgcgttgtgcatataaagctaaaaatgaaa 28185050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 26179609 - 26179552
Alignment:
Q  98 ttaaaaatatgctgcaactaatttatattttcattttatgcaatcagttggagggttc 155  Q
    ||||||||||||||||||||| ||| ||||||||   ||||||| |||||||||||||    
T  26179609 ttaaaaatatgctgcaactaacttacattttcatgcaatgcaattagttggagggttc 26179552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 26236036 - 26235983
Alignment:
Q  102 aaatatgctgcaactaatttatattttcattttatgcaatcagttggagggttc 155  Q
    ||||||||||||||||||||| ||||||||   ||||||| |||||||||||||    
T  26236036 aaatatgctgcaactaatttacattttcatgcaatgcaattagttggagggttc 26235983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 28005112 - 28005164
Alignment:
Q  100 aaaaatatgctgcaactaatttatattttcattttatgcaatcagttggaggg 152  Q
    |||||| |||||||||||||||| ||||||||  |||||||| ||||||||||    
T  28005112 aaaaatctgctgcaactaatttacattttcatgctatgcaattagttggaggg 28005164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 204
Target Start/End: Complemental strand, 1366945 - 1366846
Alignment:
Q  104 atatgctgcaactaatttatattttcattttatgcaatcagttggagggttcaatgtcagnnnnnnntgtagcatcaactttgtcgaccatttcaggaac 203  Q
    |||| |||||||||||||| ||||||||  |||| ||| |||||||||||||||||| ||       ||||||  || ||||||| ||||||||||||||    
T  1366945 atattctgcaactaatttacattttcatgctatg-aattagttggagggttcaatgttagaacaacctgtagccacatctttgtccaccatttcaggaac 1366847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 26128878 - 26128815
Alignment:
Q  13 aaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgca 76  Q
    |||||||| ||||  ||||||||||||| ||| ||||||||||||||||| | ||||| |||||    
T  26128878 aaactgatactaccatcaaaccttctcaggaagataatgtaatatagtaccatctcatcgtgca 26128815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 26129559 - 26129502
Alignment:
Q  98 ttaaaaatatgctgcaactaatttatattttcattttatgcaatcagttggagggttc 155  Q
    ||||||||||||||||||||| ||| ||||||||  |||||| | || ||||||||||    
T  26129559 ttaaaaatatgctgcaactaaattacattttcatgctatgcatttagctggagggttc 26129502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 22392469 - 22392534
Alignment:
Q  98 ttaaaaatatgctgcaactaatttatattttcattttatgcaatcagttggagggttcaatgtcag 163  Q
    |||||||||| |||||||||||||| ||||||||  || ||||||||||||||||||||| |||||    
T  22392469 ttaaaaatattctgcaactaatttacattttcatgctacgcaatcagttggagggttcaacgtcag 22392534  T

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Target: scaffold0257 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18509 - 18596
Alignment:
Q  1 gtccacttggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatatagagctaaa 88  Q
    ||||||||||| ||||||||  | | |||||||||||||| | |||| |||||||||  ||||||| ||||||||||||| |||||||    
T  18509 gtccacttggagaaactgatattgccgtcaaaccttctcaggtaaatcatgtaatatcctacaaccgcattgtgcatataaagctaaa 18596  T

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Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 157
Target Start/End: Complemental strand, 53942 - 53883
Alignment:
Q  98 ttaaaaatatgctgcaactaatttatattttcattttatgcaatcagttggagggttcaa 157  Q
    ||||||||||  ||||||||||||| ||||||||  ||||| ||||||||||||||||||    
T  53942 ttaaaaatattgtgcaactaatttacattttcatgctatgctatcagttggagggttcaa 53883  T

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Target: scaffold1142 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1142
Description:

Target: scaffold1142; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 1332 - 1386
Alignment:
Q  98 ttaaaaatatgctgcaactaatttatattttcattttatgcaatcagttggaggg 152  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||| ||||||||||    
T  1332 ttaaaaatatgctgcaactaatttacatttttatggtatgcaattagttggaggg 1386  T

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Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 8692989 - 8692895
Alignment:
Q  1 gtccacttggacaaactgatgctactgtcaaaccttctcaagaaaataatgtaatatagtacaacctcattgtgcatatagagctaaaaaggaaa 95  Q
    ||||||||||| ||||||||  | | | |||||||||||| | |||| ||||||||| |||| ||  ||||||||||||| ||||||||| ||||    
T  8692989 gtccacttggagaaactgatattgccggcaaaccttctcaggtaaatcatgtaatatcgtaccactgcattgtgcatataaagctaaaaaagaaa 8692895  T

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