View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3820_high_17 (Length: 480)
Name: NF3820_high_17
Description: NF3820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3820_high_17 |
 | |
|
| [»] scaffold0044 (1 HSPs) |
| | |
|
| [»] scaffold0157 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 428; Significance: 0; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 1 - 465
Target Start/End: Original strand, 55728909 - 55729373
Alignment:
| Q |
1 |
aatcatatgcagacacatatcaccacgtgacagatctatcaccacctacgttgcgagcaaacaaaacctacatccaccgtcaagaaagaaagcggatcta |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55728909 |
aatcatatgcagacacatatcaccacgtgaccgatctatcaccacctacgttgcgagcaaacaaaacctacatccaccgtcaagaaagaaagcggatcta |
55729008 |
T |
|
| Q |
101 |
atatcaaccatcgcatatcgaaaagacaaactcaagccatcggtgttgaactgtcagagaaatagagccgcaacacatttcacgactccacaagagatcg |
200 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55729009 |
atatcaaccatcgcataccgaaaagacaaactcaagccatcggtgttgaactatcagagaaatagagccgcaacacatttcacgactccacaagagatcg |
55729108 |
T |
|
| Q |
201 |
acctttggaaccaccgccaaaatcaccgtacaagaccatcggcatatctgaaggtaggtggtgcggagggcttaagccgctcgtcgcaccaccaataacg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55729109 |
acctttggaaccaccgccaaaatcaccgtacaagaccatcggcatatctggaggtaggtggtgcggagggcttaagccgctcgtcgcaccaccaataacg |
55729208 |
T |
|
| Q |
301 |
gcctctacatggaaacaagattgattattgtattgaaaaagttatcactaacgatacgacattagtatgtttctcttaaaagaattgaagtaactnnnnn |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55729209 |
gcctctacatggaaacaagattgattattgtattgaaaaagttatcactaacgatacgacattagtatgtttctcttaaaagaattgaagtaactaaaaa |
55729308 |
T |
|
| Q |
401 |
nnttgattatggacaaaagtgtattgtggccagcgttttacatgattagtaataaagaacaaaag |
465 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55729309 |
aattgattatggacaaaagtgtattgtggccagcgttttacatgattagtaataaagaacaaaag |
55729373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 19 - 326
Target Start/End: Original strand, 38093444 - 38093750
Alignment:
| Q |
19 |
atcaccacgtgacagatctatcaccacctacgttgcgagcaaacaaaacctacatccaccgtcaagaaagaaagcggatctaatatcaaccatcgcatat |
118 |
Q |
| |
|
||||||||||||| |||| ||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||| | |||| |
|
|
| T |
38093444 |
atcaccacgtgaccgatccatcactgcccacgttgcgagcaaacaaaacctacatccaccgccaagaaagaaaacggatctgatatcaaccaccacatac |
38093543 |
T |
|
| Q |
119 |
cgaaaagacaaactcaagccatcggtgttgaactgtcagagaaatagagccgcaacacatttcacgactccacaagagatcgacctttggaaccaccgcc |
218 |
Q |
| |
|
| ||||||||||| |||| |||||||||||||| | | ||||| ||| | |||||||||||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
38093544 |
caaaaagacaaacacaagtcatcggtgttgaacggccggagaaccagactc-caacacatttcacgactccacaagaggtcgactgccgaaaccaccgcc |
38093642 |
T |
|
| Q |
219 |
aaaatcaccgtacaagaccatcggcatatctgaaggtaggtggtgcggagggcttaagccgctcgtcgcaccaccaataacggcctctacatggaaacaa |
318 |
Q |
| |
|
|||| ||| ||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| || || |
|
|
| T |
38093643 |
aaaaccactgtacaagaccatcggcagatctggaggtaggtggtgcagagggcttaagccgctcgtcgcaccaccataaacggcttctacatggtaagaa |
38093742 |
T |
|
| Q |
319 |
gattgatt |
326 |
Q |
| |
|
||| |||| |
|
|
| T |
38093743 |
gatagatt |
38093750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 26 - 294
Target Start/End: Original strand, 6410099 - 6410368
Alignment:
| Q |
26 |
cgtgacagatctatcaccacctacgttgcgagcaaacaaaacctacatccaccgtcaagaaagaaagcggatctaatatcaaccatcgcatatcgaaaag |
125 |
Q |
| |
|
|||||| |||| ||||||||||| ||||||||||||| ||||| |||||||| ||||| ||||| | |||| ||||| ||| | | | | ||||| |
|
|
| T |
6410099 |
cgtgaccgatccatcaccacctattttgcgagcaaacataacctccatccaccaccaagagagaaattgaatcttgtatcagccaccacgcaac-aaaag |
6410197 |
T |
|
| Q |
126 |
ac--aaactcaagccatcggtgttgaactgtcagagaaatagagccgcaacacatttcacgactccacaagagatcgacctttggaaccaccgccaaaat |
223 |
Q |
| |
|
|| ||| ||| |||||| | ||||||| | |||||||| ||||| |||||||| |||||||| ||||||||| |||||| ||||||||||||||||| |
|
|
| T |
6410198 |
acgaaaaatcaggccatcagagttgaacggccagagaaacagagctgcaacacaattcacgaccccacaagaggtcgaccgctggaaccaccgccaaaac |
6410297 |
T |
|
| Q |
224 |
caccgtacaagaccatcggcatatctgaaggtaggtggtgcggagggcttaagccgctcgtcgcaccacca |
294 |
Q |
| |
|
| |||| || ||||||| ||||| || ||||||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
6410298 |
cgccgtgcaggaccatcaacatatttggaggtaggtgatgcggagggcacaagccgctcgtcgcaccacca |
6410368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 16620675 - 16620616
Alignment:
| Q |
234 |
gaccatcggcatatctgaaggtaggtggtgcggagggcttaagccgctcgtcgcaccacc |
293 |
Q |
| |
|
|||||| |||| || ||||||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
16620675 |
gaccattggcagatttgaaggttagtggtgcggagggctgaagccgctcgtcgcaccacc |
16620616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 12485206 - 12485146
Alignment:
| Q |
234 |
gaccatcggcatatctgaaggtaggtggtgcggagggcttaagccgctcgtcgcaccacca |
294 |
Q |
| |
|
|||||||| || || || ||||||||||||| ||||||| |||| |||||||||||||||| |
|
|
| T |
12485206 |
gaccatcgacaaatatggaggtaggtggtgcagagggctcaagctgctcgtcgcaccacca |
12485146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 24957608 - 24957536
Alignment:
| Q |
38 |
atcaccacctacgttgcgagcaaacaaaacctacatccaccgtcaagaaagaaagcggatctaatatcaacca |
110 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| || ||||| ||||||||||| | |||| |||||||||| |
|
|
| T |
24957608 |
atcaccacctatgttgcgagcaaacataacctccacccacctccaagaaagaaaacaaatctgatatcaacca |
24957536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 2 - 326
Target Start/End: Original strand, 12156573 - 12156897
Alignment:
| Q |
2 |
atcatatgcagacacatatcaccacgtgacagatctatcaccacctacgttgcgagcaaacaaaacctacatccaccgtcaagaaagaaagcggatctaa |
101 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||| | ||||| | |
|
|
| T |
12156573 |
atcatatgcagacacacatcaccacgtgactgatccatcaccacctacattgcaagcaaacaaaacctacatccaccgtcaagaaagaaaacagatctga |
12156672 |
T |
|
| Q |
102 |
tatcaaccatcgcatatcgaaaagacaaactcaagccatcggtgttgaactgtcagagaaatagagccgcaacacatttcacgactccacaagagatcga |
201 |
Q |
| |
|
||||||||| |||||| | ||||||||||||||||||||||||||||||| | |||||||| |||| ||| | ||||||||||||||||||||||||||| |
|
|
| T |
12156673 |
tatcaaccaccgcataccaaaaagacaaactcaagccatcggtgttgaacggccagagaaacagagtcgcgatacatttcacgactccacaagagatcga |
12156772 |
T |
|
| Q |
202 |
cctttggaaccaccgccaaaatcaccgtacaagaccatcggcatatctgaaggtaggtggtgcggagggcttaagccgctcgtcgcaccaccaataacgg |
301 |
Q |
| |
|
| |||||||||||||||| ||||||| | ||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12156773 |
tagtcggaaccaccgccaaaaccaccgtatagaaccatcggcggatctggaggtaggtggtgcggaaggcttaagccgctcgtcgcaccaccaataacgg |
12156872 |
T |
|
| Q |
302 |
cctctacatggaaacaagattgatt |
326 |
Q |
| |
|
||||||||| | || |||||||||| |
|
|
| T |
12156873 |
cctctacatcgtaagaagattgatt |
12156897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 164; Significance: 2e-87; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 2 - 310
Target Start/End: Complemental strand, 14350999 - 14350690
Alignment:
| Q |
2 |
atcatatgcagacacatatcaccacgtgacagatctatcaccacctacgttgcgagcaaacaaaacctacatccaccgtcaagaaagaaag--cggatct |
99 |
Q |
| |
|
|||||| ||||||||| |||||||||||| ||||||||||||||||| |||||||| | |||||||||||||||||||||||||| ||| | ||||| |
|
|
| T |
14350999 |
atcatacgcagacacacatcaccacgtgatcgatctatcaccacctacattgcgagcgagcaaaacctacatccaccgtcaagaaaaaaaaaacagatct |
14350900 |
T |
|
| Q |
100 |
aatatcaaccatcgcatatcgaaaagacaaactcaagccatcggtgttgaactgtcagagaaatagagccgcaacacatttcacgactccacaagagatc |
199 |
Q |
| |
|
||||||||||| |||||| | |||||||||||||||||||||| |||||||| | |||||||| |||| || | ||||||||||||||||||||||||| |
|
|
| T |
14350899 |
aatatcaaccaccgcataccaaaaagacaaactcaagccatcgatgttgaacggccagagaaacagagtcgtgatacatttcacgactccacaagagatc |
14350800 |
T |
|
| Q |
200 |
gacctttggaaccaccgccaaaatcaccgtacaagaccatcggcatatctgaaggtaggtggtgcggagggcttaagccgctcgtcgcaccaccaataac |
299 |
Q |
| |
|
|| | ||||| |||||||||| ||||||||| |||||||||| |||||||||||||||||||||| ||||||||||| |||||||| |||||||||| |
|
|
| T |
14350799 |
gatagtcggaacaaccgccaaaaccaccgtacaggaccatcggcggatctgaaggtaggtggtgcgga-ggcttaagccgatcgtcgcatcaccaataac |
14350701 |
T |
|
| Q |
300 |
ggcctctacat |
310 |
Q |
| |
|
||||||||||| |
|
|
| T |
14350700 |
ggcctctacat |
14350690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 36 - 310
Target Start/End: Original strand, 32058777 - 32059038
Alignment:
| Q |
36 |
ctatcaccacctacgttgcgagcaaacaaaacctacatccaccgtcaagaaagaaagcggatctaatatcaaccatcgcatatcgaaaagacaaactcaa |
135 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| || |||||||||||| ||||| ||||||| ||||||||| | |||| | ||||||||||||||| |
|
|
| T |
32058777 |
ctatcaccacctacgttgcgagcaaacagaaccttcacccaccgtcaagagagaaaacggatctggtatcaaccaccacata-ccaaaagacaaactcaa |
32058875 |
T |
|
| Q |
136 |
gccatcggtgttgaactgtcagagaaatagagccgcaacacatttcacgactccacaagagatcgacctttggaaccaccgccaaaatcaccgtacaaga |
235 |
Q |
| |
|
|| ||| ||||||||| | |||||||| ||||||| |||||| ||||| ||||||| |||| | |||||| |||||| | || | || |
|
|
| T |
32058876 |
gcaatcagtgttgaacggccagagaaacagagccgtaacacaattcacaactccaccagaggt------------ccaccgtcaaaattgcagtttagga |
32058963 |
T |
|
| Q |
236 |
ccatcggcatatctgaaggtaggtggtgcggagggcttaagccgctcgtcgcaccaccaataacggcctctacat |
310 |
Q |
| |
|
|||||| || ||||| ||||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||| |
|
|
| T |
32058964 |
ccatcgacagatctggaggtaggtggtgcggagggctcaagccgctggtcgcaccaccataaacggactctacat |
32059038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0044 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0044
Description:
Target: scaffold0044; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 19 - 294
Target Start/End: Complemental strand, 42750 - 42476
Alignment:
| Q |
19 |
atcaccacgtgacagatctatcaccacctacgttgcgagcaaacaaaacctacatccaccgtcaagaaagaaagcggatctaatatcaaccatcgcatat |
118 |
Q |
| |
|
||||||||||||| |||| ||||| ||| | |||| |||||||| |||||||||||||| | ||||||||||| ||||||| |||||||||| ||| |
|
|
| T |
42750 |
atcaccacgtgaccgatccatcactaccca-gttgggagcaaactaaacctacatccacggccaagaaagaaaacggatctgatatcaaccacgatatac |
42652 |
T |
|
| Q |
119 |
cgaaaagacaaactcaagccatcggtgttgaactgtcagagaaatagagccgcaacacatttcacgactccacaagagatcgacctttggaaccaccgcc |
218 |
Q |
| |
|
| ||||||||||| |||| ||||| ||||||| | | ||||| | | |||||||||||||||||||||||||||| ||||| | | |||||||||| |
|
|
| T |
42651 |
caaaaagacaaacacaagtcatcgctgttgaatggccggagaaccatactcgcaacacatttcacgactccacaagaggtcgacttccgaaaccaccgcc |
42552 |
T |
|
| Q |
219 |
aaaatcaccgtacaagaccatcggcatatctgaaggtaggtggtgcggagggcttaagccgctcgtcgcaccacca |
294 |
Q |
| |
|
|||| ||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42551 |
aaaaccactgtacaagaccatcggcagatctggaggtaggtggtgcggagggcttaagccgctcgtcgcaccacca |
42476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 107; Significance: 2e-53; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 310
Target Start/End: Complemental strand, 38531242 - 38530943
Alignment:
| Q |
2 |
atcatatgcagacacatatcaccac----gtgacagatctatcaccacctacgttgcgagcaaacaaaacctacatccaccgtcaagaaagaaagcggat |
97 |
Q |
| |
|
|||||||||||||||| |||||||| || || |||| |||||||| || ||||||| |||||||||||| |||||||| ||||||||||| | ||| |
|
|
| T |
38531242 |
atcatatgcagacacagatcaccactttcgtaaccgatccatcaccacatatgttgcgaacaaacaaaacctccatccaccaccaagaaagaaaacagat |
38531143 |
T |
|
| Q |
98 |
ctaatatcaaccatcgcatatcgaaaagacaaactcaagccatcggtgttgaactgtcagagaaatagagccgcaacacatttcacgactccacaagaga |
197 |
Q |
| |
|
|| ||||||||| | |||| | ||||||||||||||||||||||||||||||| | |||||||| | | | |||||| |||||||||||||||||||| |
|
|
| T |
38531142 |
ctggtatcaaccaccacataccaaaaagacaaactcaagccatcggtgttgaac-gacagagaaacaaaactgcaacatatttcacgactccacaagagg |
38531044 |
T |
|
| Q |
198 |
tcgacctttggaaccaccgccaaaatcaccgtacaagaccatcggcatatctgaaggtaggtggtgcggagggcttaagccgctcgtcgcaccaccaata |
297 |
Q |
| |
|
||| ||||||||| ||| |||||| |||||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
38531043 |
tcg------------accgccaaattcatcgtacaggaccatcgacatatctggaagtaggtggtgcggagggctcaagccgctcgtcgcaccaccataa |
38530956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 150
Target Start/End: Complemental strand, 14950306 - 14950161
Alignment:
| Q |
5 |
atatgcagacacatatcaccacgtgacagatctatcaccacctacgttgcgagcaaacaaaacctacatccaccgtcaagaaagaaagcggatctaatat |
104 |
Q |
| |
|
||||||||| ||| ||||||||||||| |||| |||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
14950306 |
atatgcagatacagatcaccacgtgaccgatccatcaccacctacgtcgcaagcaaacaaaacctacatccaccgtcaagaaagaaaacggatctggtat |
14950207 |
T |
|
| Q |
105 |
caaccatcgcatatcgaaaagacaaactcaagccatcggtgttgaa |
150 |
Q |
| |
|
|||||| |||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
14950206 |
caaccaccgcataccaaaaagacaaactcaagccatcggtgttgaa |
14950161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 310
Target Start/End: Complemental strand, 14950140 - 14950077
Alignment:
| Q |
246 |
atctgaaggtaggtggtgcggagggcttaagccgctcgtcgcaccaccaataacggcctctacat |
310 |
Q |
| |
|
||||| |||||||||||||| | ||||||| ||||| ||||||||||||||||| |||||||||| |
|
|
| T |
14950140 |
atctggaggtaggtggtgcg-atggcttaatccgcttgtcgcaccaccaataactgcctctacat |
14950077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 43 - 310
Target Start/End: Original strand, 30845666 - 30845933
Alignment:
| Q |
43 |
cacctacgttgcgagcaaacaaaacctacatccaccgtcaagaaagaaagcggatctaatatcaaccatcgcatatcgaaaagacaaactcaagccatcg |
142 |
Q |
| |
|
|||||| |||||||| ||||||||||| ||||||||| ||||| ||||| | || | ||||||||| | |||| | ||||||||| ||||||||||| |
|
|
| T |
30845666 |
cacctatgttgcgagaaaacaaaaccttcatccaccgccaagagagaaaacatatatgttatcaaccaccccataccaaaaagacaatctcaagccatca |
30845765 |
T |
|
| Q |
143 |
gtgttgaactgtca-gagaaatagagccgcaacacatttcacgactccacaagagatcgacctttggaaccaccgccaaaatcaccgtacaagaccatcg |
241 |
Q |
| |
|
||| ||| || || ||||||||||||| |||||| |||||||||||||||||| ||||| | ||||||||| |||||| | ||||| |||||||| |
|
|
| T |
30845766 |
atgtcgaa-tgacaagagaaatagagccataacacaattcacgactccacaagaggtcgactgtcggaaccaccaccaaaaccgttgtacaggaccatcg |
30845864 |
T |
|
| Q |
242 |
gcatatctgaaggtaggtggtgcggagggcttaagccgctcgtcgcaccaccaataacggcctctacat |
310 |
Q |
| |
|
||| ||||| ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30845865 |
gcaaatctggaggtaggtggtgcggagggttcaagccgctcgtcgcaccaccataaacggcctctacat |
30845933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0157 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0157
Description:
Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 35271 - 35331
Alignment:
| Q |
234 |
gaccatcggcatatctgaaggtaggtggtgcggagggcttaagccgctcgtcgcaccacca |
294 |
Q |
| |
|
|||||||| || || || ||||||||||||| ||||||| |||| |||||||||||||||| |
|
|
| T |
35271 |
gaccatcgacaaatatggaggtaggtggtgcagagggctcaagctgctcgtcgcaccacca |
35331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 3302690 - 3302726
Alignment:
| Q |
33 |
gatctatcaccacctacgttgcgagcaaacaaaacct |
69 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
3302690 |
gatctatcaccacctatgttgcgagcaaacataacct |
3302726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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