View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3820_high_174 (Length: 207)
Name: NF3820_high_174
Description: NF3820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3820_high_174 |
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Alignment Details
Target: chr8 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 43311293 - 43311466
Alignment:
| Q |
18 |
gatgtgactgtggataaggttccctgtcccaccaaaaatagcaagcaatctatgtcggtggttgctgatgcttcacttacaaaagtctatgaagctgaaa |
117 |
Q |
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| T |
43311293 |
gatgtgactgtggataaggttccctgtcccaccaaaaatagcaagcaatctatgtcggtggttgctgatgcttcacttacaaaagtctatgaagctgaaa |
43311392 |
T |
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| Q |
118 |
ccacaaatgttgccacagattcctatggtgagccagaatcttgcagcaacaccagcccaggtatgaccatttca |
191 |
Q |
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| T |
43311393 |
ccacaaatgttgccacagattcctatggtgagccagaatcttgcagcaacaccagcccaggtatgaccatttca |
43311466 |
T |
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