View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3820_low_119 (Length: 256)

Name: NF3820_low_119
Description: NF3820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3820_low_119
NF3820_low_119
[»] chr3 (75 HSPs)
chr3 (1-239)||(40372379-40372616)
chr3 (1-239)||(8477641-8477879)
chr3 (1-239)||(9090884-9091121)
chr3 (4-239)||(7167525-7167759)
chr3 (1-239)||(8738646-8738883)
chr3 (4-239)||(28503442-28503681)
chr3 (1-239)||(2671188-2671406)
chr3 (2-159)||(1306223-1306379)
chr3 (4-239)||(28501275-28501514)
chr3 (86-237)||(4598829-4598981)
chr3 (86-237)||(4601050-4601202)
chr3 (86-233)||(10058157-10058305)
chr3 (86-233)||(10060379-10060527)
chr3 (86-233)||(10062601-10062749)
chr3 (86-233)||(10064823-10064971)
chr3 (86-239)||(27352204-27352358)
chr3 (86-232)||(23198251-23198399)
chr3 (86-233)||(10055935-10056083)
chr3 (86-233)||(10067045-10067193)
chr3 (86-237)||(25637138-25637290)
chr3 (86-233)||(7782454-7782603)
chr3 (86-233)||(10211108-10211256)
chr3 (86-232)||(23200450-23200598)
chr3 (86-233)||(3617163-3617311)
chr3 (86-237)||(6716210-6716361)
chr3 (86-232)||(32143668-32143816)
chr3 (86-237)||(6718394-6718545)
chr3 (86-237)||(54634835-54634986)
chr3 (86-233)||(45282695-45282842)
chr3 (88-239)||(2672542-2672695)
chr3 (88-239)||(18656752-18656905)
chr3 (88-239)||(24968428-24968581)
chr3 (88-239)||(32475795-32475948)
chr3 (145-233)||(10208908-10208996)
chr3 (88-239)||(2676698-2676851)
chr3 (88-239)||(8512551-8512704)
chr3 (88-239)||(8517431-8517584)
chr3 (88-239)||(32480653-32480806)
chr3 (87-237)||(800811-800963)
chr3 (8-182)||(27453235-27453401)
chr3 (2-57)||(27986216-27986271)
chr3 (178-239)||(22172785-22172846)
chr3 (2-57)||(1736064-1736119)
chr3 (2-57)||(8370249-8370304)
chr3 (2-57)||(21711493-21711548)
chr3 (2-57)||(27974712-27974767)
chr3 (2-57)||(32143594-32143649)
chr3 (2-57)||(33386435-33386490)
chr3 (2-57)||(37725946-37726001)
chr3 (2-57)||(39032315-39032370)
chr3 (2-57)||(40592542-40592597)
chr3 (2-59)||(6794473-6794530)
chr3 (2-55)||(48438486-48438539)
chr3 (159-239)||(1306400-1306480)
chr3 (86-158)||(33386343-33386415)
chr3 (2-57)||(24694926-24694981)
chr3 (2-57)||(26928359-26928414)
chr3 (2-57)||(47923664-47923719)
chr3 (3-53)||(16264621-16264671)
chr3 (4-74)||(22172985-22173054)
chr3 (3-57)||(27026978-27027032)
chr3 (2-59)||(1417249-1417306)
chr3 (2-59)||(26299259-26299316)
chr3 (2-59)||(37466566-37466623)
chr3 (2-54)||(25929159-25929211)
chr3 (89-182)||(37408215-37408310)
chr3 (2-53)||(36029364-36029415)
chr3 (2-53)||(40844926-40844977)
chr3 (6-59)||(3323449-3323502)
chr3 (2-59)||(3328115-3328172)
chr3 (88-159)||(22172884-22172957)
chr3 (86-139)||(26928287-26928340)
chr3 (86-118)||(10209004-10209036)
chr3 (2-57)||(23410568-23410624)
chr3 (2-61)||(25796053-25796113)
[»] chr2 (31 HSPs)
chr2 (1-239)||(9295985-9296222)
chr2 (1-239)||(14291765-14292002)
chr2 (1-239)||(11098510-11098747)
chr2 (1-239)||(25409903-25410142)
chr2 (2-239)||(3492025-3492253)
chr2 (86-232)||(4484644-4484792)
chr2 (86-237)||(12647690-12647842)
chr2 (86-239)||(30833045-30833200)
chr2 (86-232)||(32289279-32289427)
chr2 (86-237)||(6266400-6266553)
chr2 (88-239)||(39811600-39811753)
chr2 (86-214)||(40739178-40739308)
chr2 (88-239)||(19344733-19344886)
chr2 (88-239)||(19349591-19349744)
chr2 (2-59)||(14698778-14698835)
chr2 (2-59)||(33118406-33118463)
chr2 (2-55)||(40739105-40739158)
chr2 (2-57)||(33528395-33528450)
chr2 (88-233)||(32247097-32247244)
chr2 (2-57)||(20522493-20522548)
chr2 (6-57)||(28258948-28258999)
chr2 (2-59)||(10445236-10445293)
chr2 (2-54)||(21630216-21630268)
chr2 (2-54)||(34389122-34389174)
chr2 (2-54)||(36757536-36757588)
chr2 (2-57)||(8389920-8389975)
chr2 (2-48)||(17865476-17865522)
chr2 (4-54)||(23078245-23078295)
chr2 (2-61)||(31056316-31056376)
chr2 (2-61)||(34682097-34682157)
chr2 (4-78)||(39811773-39811848)
[»] chr4 (41 HSPs)
chr4 (1-239)||(24742217-24742454)
chr4 (86-238)||(13992600-13992754)
chr4 (1-239)||(29760918-29761135)
chr4 (86-237)||(7122392-7122544)
chr4 (88-239)||(56141635-56141788)
chr4 (2-159)||(28468202-28468360)
chr4 (86-233)||(5135779-5135927)
chr4 (86-233)||(5138005-5138153)
chr4 (4-239)||(9228809-9229053)
chr4 (86-233)||(8393111-8393258)
chr4 (88-239)||(51520775-51520927)
chr4 (4-239)||(9224022-9224266)
chr4 (86-233)||(8395320-8395467)
chr4 (86-237)||(31495623-31495776)
chr4 (86-233)||(31985236-31985385)
chr4 (88-239)||(45356921-45357074)
chr4 (178-237)||(7124614-7124673)
chr4 (104-239)||(5732987-5733123)
chr4 (88-239)||(18712378-18712531)
chr4 (88-239)||(18856033-18856186)
chr4 (88-239)||(45347440-45347593)
chr4 (88-238)||(3814330-3814482)
chr4 (4-76)||(51520683-51520754)
chr4 (2-57)||(3777820-3777875)
chr4 (2-57)||(5268971-5269026)
chr4 (2-57)||(16623064-16623119)
chr4 (2-57)||(54867450-54867505)
chr4 (3-57)||(10047653-10047707)
chr4 (3-57)||(31985404-31985458)
chr4 (2-59)||(25861802-25861859)
chr4 (146-239)||(28468101-28468196)
chr4 (2-57)||(5396442-5396497)
chr4 (2-57)||(6743186-6743241)
chr4 (2-54)||(8689270-8689322)
chr4 (4-48)||(18712581-18712625)
chr4 (1-57)||(36315001-36315057)
chr4 (1-57)||(36329210-36329266)
chr4 (2-53)||(5143531-5143582)
chr4 (2-57)||(16628643-16628698)
chr4 (2-59)||(42599344-42599400)
chr4 (2-54)||(5147949-5148001)
[»] chr6 (46 HSPs)
chr6 (1-239)||(5674353-5674590)
chr6 (2-239)||(22709281-22709521)
chr6 (86-237)||(33342410-33342562)
chr6 (86-233)||(34166796-34166944)
chr6 (86-233)||(6026963-6027111)
chr6 (86-233)||(34164574-34164722)
chr6 (86-237)||(6136271-6136422)
chr6 (145-239)||(5266455-5266549)
chr6 (4-239)||(22010312-22010556)
chr6 (86-233)||(25421020-25421168)
chr6 (86-235)||(3073064-3073215)
chr6 (86-237)||(411811-411965)
chr6 (88-239)||(16839054-16839207)
chr6 (145-233)||(13150979-13151067)
chr6 (86-233)||(16554583-16554730)
chr6 (86-233)||(16631139-16631286)
chr6 (88-239)||(6005730-6005883)
chr6 (88-239)||(33330056-33330209)
chr6 (4-239)||(11857200-11857444)
chr6 (86-233)||(16578825-16578972)
chr6 (86-233)||(16616408-16616555)
chr6 (86-233)||(16652826-16652973)
chr6 (126-233)||(25420926-25421034)
chr6 (88-239)||(28155194-28155347)
chr6 (88-239)||(33335553-33335706)
chr6 (4-239)||(14737189-14737436)
chr6 (123-239)||(6438843-6438960)
chr6 (4-239)||(14742049-14742296)
chr6 (90-233)||(26253698-26253843)
chr6 (178-239)||(5343880-5343941)
chr6 (2-57)||(10076962-10077017)
chr6 (195-238)||(30125142-30125185)
chr6 (3-57)||(5757249-5757303)
chr6 (145-239)||(2171884-2171980)
chr6 (86-139)||(6097747-6097800)
chr6 (2-59)||(31936846-31936903)
chr6 (145-233)||(6097787-6097877)
chr6 (2-57)||(31086245-31086300)
chr6 (86-139)||(2171844-2171897)
chr6 (2-59)||(5572012-5572069)
chr6 (2-59)||(31979783-31979840)
chr6 (2-57)||(18234354-18234409)
chr6 (7-57)||(23896628-23896678)
chr6 (4-57)||(24435743-24435796)
chr6 (145-234)||(27647596-27647685)
chr6 (2-54)||(21272763-21272815)
[»] chr7 (50 HSPs)
chr7 (1-239)||(2058245-2058482)
chr7 (1-239)||(1533027-1533264)
chr7 (1-239)||(21646280-21646519)
chr7 (2-239)||(18409037-18409275)
chr7 (2-239)||(18413913-18414151)
chr7 (87-239)||(24789550-24789703)
chr7 (4-239)||(4873354-4873598)
chr7 (86-233)||(6592644-6592792)
chr7 (86-233)||(6594860-6595008)
chr7 (86-233)||(18389067-18389215)
chr7 (86-233)||(18392503-18392651)
chr7 (86-238)||(1562310-1562463)
chr7 (1-75)||(21640082-21640156)
chr7 (126-232)||(39731064-39731172)
chr7 (4-239)||(12397137-12397382)
chr7 (4-239)||(24023942-24024186)
chr7 (86-238)||(25767267-25767421)
chr7 (104-239)||(12406598-12406734)
chr7 (145-239)||(21640206-21640300)
chr7 (145-239)||(20357151-20357245)
chr7 (145-233)||(32060671-32060759)
chr7 (4-75)||(20357294-20357364)
chr7 (88-239)||(16880384-16880537)
chr7 (88-239)||(16885239-16885392)
chr7 (88-239)||(24265800-24265953)
chr7 (88-239)||(24260944-24261097)
chr7 (86-159)||(39731158-39731231)
chr7 (2-63)||(46516070-46516131)
chr7 (4-239)||(31109194-31109443)
chr7 (145-237)||(20343625-20343717)
chr7 (165-237)||(43504523-43504595)
chr7 (6-57)||(2479611-2479662)
chr7 (2-57)||(23402784-23402839)
chr7 (178-239)||(21811862-21811923)
chr7 (86-139)||(48408605-48408658)
chr7 (4-59)||(2580662-2580717)
chr7 (2-57)||(20284360-20284415)
chr7 (2-57)||(44847896-44847951)
chr7 (2-57)||(47263937-47263992)
chr7 (3-57)||(49091961-49092015)
chr7 (2-59)||(2647466-2647523)
chr7 (2-57)||(3047525-3047581)
chr7 (2-54)||(21989179-21989231)
chr7 (2-57)||(79659-79714)
chr7 (2-57)||(33332221-33332276)
chr7 (145-239)||(48408522-48408618)
chr7 (2-54)||(4796443-4796494)
chr7 (2-61)||(5817036-5817096)
chr7 (86-138)||(20343705-20343756)
chr7 (86-118)||(32060631-32060663)
[»] chr8 (36 HSPs)
chr8 (1-239)||(4759657-4759894)
chr8 (1-239)||(1261538-1261777)
chr8 (1-239)||(36979653-36979891)
chr8 (4-239)||(18852750-18852984)
chr8 (4-239)||(30655926-30656159)
chr8 (4-239)||(18870144-18870378)
chr8 (1-239)||(10688722-10688960)
chr8 (4-239)||(7289551-7289785)
chr8 (4-239)||(6311578-6311812)
chr8 (86-233)||(42575631-42575779)
chr8 (1-239)||(26288164-26288393)
chr8 (1-239)||(26301421-26301650)
chr8 (1-239)||(26313415-26313644)
chr8 (1-75)||(33037554-33037628)
chr8 (145-239)||(33037410-33037504)
chr8 (86-238)||(3439211-3439363)
chr8 (87-237)||(25689666-25689817)
chr8 (88-239)||(10683862-10684015)
chr8 (88-239)||(35745702-35745855)
chr8 (86-159)||(31043112-31043185)
chr8 (145-233)||(15290273-15290361)
chr8 (145-233)||(15470642-15470730)
chr8 (86-238)||(2627443-2627597)
chr8 (88-239)||(25327787-25327940)
chr8 (88-239)||(39784448-39784601)
chr8 (127-233)||(31043017-31043125)
chr8 (1-57)||(7412610-7412666)
chr8 (1-57)||(23799347-23799403)
chr8 (2-57)||(5702251-5702306)
chr8 (2-54)||(19175528-19175580)
chr8 (2-57)||(4456299-4456354)
chr8 (2-57)||(4696379-4696434)
chr8 (2-59)||(19752163-19752220)
chr8 (86-118)||(15290369-15290401)
chr8 (86-118)||(15470738-15470770)
chr8 (2-57)||(28307833-28307889)
[»] chr5 (63 HSPs)
chr5 (1-233)||(35387936-35388169)
chr5 (1-239)||(24136123-24136360)
chr5 (2-239)||(38219673-38219906)
chr5 (4-239)||(31180493-31180726)
chr5 (86-237)||(25077831-25077983)
chr5 (86-237)||(25135800-25135952)
chr5 (88-239)||(43592597-43592749)
chr5 (104-239)||(43599059-43599194)
chr5 (104-239)||(43604551-43604686)
chr5 (104-239)||(43610043-43610178)
chr5 (88-239)||(27445291-27445443)
chr5 (88-239)||(27450134-27450286)
chr5 (86-233)||(16544123-16544271)
chr5 (86-233)||(16546345-16546493)
chr5 (87-233)||(29751467-29751615)
chr5 (86-233)||(40379807-40379955)
chr5 (86-233)||(40382018-40382166)
chr5 (86-237)||(26177592-26177745)
chr5 (88-239)||(1456761-1456914)
chr5 (86-237)||(18441954-18442107)
chr5 (86-233)||(10592972-10593120)
chr5 (86-237)||(26170483-26170636)
chr5 (88-239)||(15045004-15045157)
chr5 (88-239)||(33768495-33768648)
chr5 (88-239)||(33791627-33791780)
chr5 (4-74)||(1456952-1457021)
chr5 (86-237)||(9789530-9789683)
chr5 (88-239)||(2785686-2785839)
chr5 (2-158)||(15464805-15464952)
chr5 (4-76)||(27445196-27445267)
chr5 (4-76)||(27450040-27450111)
chr5 (178-238)||(30631764-30631824)
chr5 (4-76)||(43592505-43592576)
chr5 (4-76)||(43598950-43599021)
chr5 (4-76)||(43604442-43604513)
chr5 (4-76)||(43609934-43610005)
chr5 (2-59)||(24553296-24553353)
chr5 (195-239)||(29402673-29402717)
chr5 (178-237)||(22536668-22536727)
chr5 (88-239)||(31401470-31401623)
chr5 (2-59)||(28832528-28832585)
chr5 (166-237)||(29720091-29720163)
chr5 (4-48)||(30631686-30631730)
chr5 (179-239)||(37561070-37561130)
chr5 (2-57)||(9353103-9353158)
chr5 (2-57)||(14520501-14520556)
chr5 (88-239)||(31396613-31396766)
chr5 (86-182)||(36932002-36932100)
chr5 (6-57)||(36932119-36932170)
chr5 (4-76)||(15044912-15044984)
chr5 (178-239)||(28807199-28807260)
chr5 (2-59)||(31300364-31300421)
chr5 (86-158)||(9353013-9353085)
chr5 (2-54)||(11916746-11916798)
chr5 (6-54)||(12083951-12083999)
chr5 (2-57)||(11181603-11181658)
chr5 (161-232)||(16407772-16407843)
chr5 (161-232)||(16409208-16409279)
chr5 (2-57)||(17003730-17003785)
chr5 (2-59)||(42127139-42127196)
chr5 (2-61)||(10282025-10282085)
chr5 (86-142)||(29722330-29722386)
chr5 (179-239)||(37556248-37556308)
[»] chr1 (38 HSPs)
chr1 (4-239)||(24786948-24787181)
chr1 (1-233)||(24202360-24202592)
chr1 (2-239)||(19365892-19366130)
chr1 (104-239)||(24793770-24793905)
chr1 (2-139)||(19358530-19358666)
chr1 (2-139)||(19361119-19361255)
chr1 (86-233)||(44203347-44203495)
chr1 (87-237)||(20622543-20622695)
chr1 (86-238)||(9986910-9987064)
chr1 (88-239)||(41398565-41398718)
chr1 (86-233)||(9036132-9036279)
chr1 (86-237)||(21053665-21053819)
chr1 (86-233)||(40282088-40282238)
chr1 (88-239)||(41390910-41391063)
chr1 (88-239)||(1054637-1054790)
chr1 (88-239)||(25439522-25439675)
chr1 (88-239)||(25444715-25444868)
chr1 (123-239)||(44023500-44023617)
chr1 (2-59)||(47098594-47098651)
chr1 (2-59)||(47102608-47102665)
chr1 (87-239)||(43988072-43988226)
chr1 (2-57)||(13604393-13604448)
chr1 (123-239)||(39445842-39445959)
chr1 (145-232)||(51765121-51765210)
chr1 (2-59)||(27104171-27104228)
chr1 (2-55)||(29652084-29652137)
chr1 (2-59)||(32889709-32889766)
chr1 (2-54)||(21536344-21536396)
chr1 (2-57)||(37070038-37070093)
chr1 (2-59)||(9476533-9476590)
chr1 (86-139)||(51765197-51765250)
chr1 (159-239)||(19361036-19361116)
chr1 (2-57)||(13598671-13598726)
chr1 (87-182)||(13604275-13604372)
chr1 (4-76)||(41398461-41398534)
chr1 (2-54)||(3281978-3282030)
chr1 (2-61)||(40816580-40816640)
chr1 (2-61)||(47703699-47703759)
[»] scaffold0491 (3 HSPs)
scaffold0491 (86-238)||(11475-11629)
scaffold0491 (145-238)||(9089-9184)
scaffold0491 (86-139)||(9049-9102)
[»] scaffold0188 (3 HSPs)
scaffold0188 (1-139)||(17638-17775)
scaffold0188 (1-75)||(23794-23868)
scaffold0188 (160-239)||(17555-17634)
[»] scaffold0565 (1 HSPs)
scaffold0565 (86-237)||(2908-3060)
[»] scaffold0674 (1 HSPs)
scaffold0674 (86-237)||(4033-4185)
[»] scaffold0137 (1 HSPs)
scaffold0137 (86-233)||(5989-6137)
[»] scaffold1519 (1 HSPs)
scaffold1519 (86-232)||(613-761)
[»] scaffold0135 (1 HSPs)
scaffold0135 (4-239)||(34677-34921)
[»] scaffold0259 (1 HSPs)
scaffold0259 (88-239)||(1862-2015)
[»] scaffold0028 (1 HSPs)
scaffold0028 (88-239)||(148567-148720)
[»] scaffold0355 (2 HSPs)
scaffold0355 (104-239)||(3460-3596)
scaffold0355 (4-55)||(3657-3708)
[»] scaffold0197 (2 HSPs)
scaffold0197 (88-239)||(13907-14060)
scaffold0197 (88-239)||(18787-18940)
[»] scaffold0009 (1 HSPs)
scaffold0009 (88-239)||(176573-176726)
[»] scaffold0140 (2 HSPs)
scaffold0140 (2-57)||(8188-8243)
scaffold0140 (86-182)||(8070-8168)
[»] scaffold0464 (1 HSPs)
scaffold0464 (178-239)||(761-822)
[»] scaffold0286 (2 HSPs)
scaffold0286 (145-239)||(22063-22159)
scaffold0286 (86-139)||(22146-22199)
[»] scaffold0087 (2 HSPs)
scaffold0087 (2-57)||(36603-36658)
scaffold0087 (2-57)||(43732-43787)
[»] scaffold0006 (3 HSPs)
scaffold0006 (2-57)||(133050-133105)
scaffold0006 (2-57)||(5956-6011)
scaffold0006 (87-182)||(132932-133029)
[»] scaffold0665 (1 HSPs)
scaffold0665 (182-239)||(8112-8169)
[»] scaffold0036 (1 HSPs)
scaffold0036 (2-54)||(85954-86006)
[»] scaffold0098 (2 HSPs)
scaffold0098 (6-57)||(45474-45525)
scaffold0098 (87-158)||(45546-45617)


Alignment Details
Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 40372616 - 40372379
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||     
T  40372616 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctct--tacaaatctgcacaagaacaca 40372519  T
Q  101 -taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
     || ||||||||||||||| || |||||||||||||||||||||||||||| |||||||| |||  || || ||||| ||||||||||| ||||||||||    
T  40372518 atatatactagtcttcctctgaagaaatcgtgtcacgatttccagatcgtggcacgatttgcgtccgttcccaggtatgaccagtccttatcaaggatac 40372419  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  40372418 ttaacgagcaagtttctgaatcgtgtcacgatttcccaag 40372379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 8477641 - 8477879
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||            ||||||||||||    
T  8477641 tctacaaagacactcaaccctttggttccctcctctgtaatccaagtttctctctctaagctcttccaagctctcttccaaaaatgaacacaagaacact 8477740  T
Q  101 taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatact 200  Q
    |||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||| ||||   ||||||||| ||||||||||| |||||||||||    
T  8477741 taaatactagccttcctctgaagcaatcgtgtcacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatact 8477840  T
Q  201 taatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||| |||||||||||| ||||||||||||||||||||||    
T  8477841 taacgagcaagtttctcaatcgtgtcacgatttcccaag 8477879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 9091121 - 9090884
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |         ||||||||||||     
T  9091121 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacaca 9091024  T
Q  101 -taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
     || ||||||| ||||||| || | ||||||| ||||||||||||||| ||||||||||| |||  || |||||||| ||||||||||| ||||||||||    
T  9091023 atatatactagacttcctctgaagcaatcgtgccacgatttccagatcatgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatac 9090924  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  9090923 ttaacgagcaagtttctgaatcgtgtcacgatttcccaag 9090884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 7167525 - 7167759
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact-ta 102  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||        ||||||||||||||  ||    
T  7167525 acaaagacactcaaccctttggttccctcctttgttatccaagtttctctctctaagctcttccaagctctatc--ccaaatctgcacaagaacacaata 7167622  T
Q  103 aatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatactta 202  Q
     ||||||||||||||| || ||||||||| || ||||| || ||||||||||||||| ||| || ||||||||| ||||||||||| |||  ||||||||    
T  7167623 tatactagtcttcctctgaagaaatcgtgccatgattttcaaatcgtgtcacgatttgcgtctgacccaaggtatgaccagtccttatcagtgatactta 7167722  T
Q  203 atgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    | |||||||||||||||||||||||||||||||||||    
T  7167723 acgagcaagtttctgaatcgtgtcacgatttcccaag 7167759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 8738883 - 8738646
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||  |         ||||||||||||     
T  8738883 tctacaaagacactcaacccattggttccctcctttgcaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacaca 8738786  T
Q  101 -taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
     || ||||||| ||||||| || | ||||||| ||||||||||||||| ||||||||||| |||  || |||||||| ||||||||||| ||||||||||    
T  8738785 atatatactagacttcctctgaagcaatcgtgccacgatttccagatcatgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatac 8738686  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  8738685 ttaacgagcaagtttctgaatcgtgtcacgatttcccaag 8738646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 28503681 - 28503442
Alignment:
Q  4 acaaagacactcaacccttt-ggttccctcctttgtaatccaagtt---tctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacac 99  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||   |||||||||||||||||||||||||||  |         ||||||||||||    
T  28503681 acaaagacactcaacccttttggttccctcctttgttatccaagttctctctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacac 28503584  T
Q  100 t-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaagga 196  Q
      || ||||||||||||||| || | ||||||| ||||||||||  ||||||||||||||||| ||| || ||||||||  ||| ||||||| ||| |||    
T  28503583 aatatatactagtcttcctctgaagcaatcgtgccacgatttcccaagatcgtgtcacgatttgcgtctgacccaaggtt-gacaagtccttatcaggga 28503485  T
Q  197 tacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  28503484 tacttaacgagcaagtttctgaattgtgtcacgatttcccaag 28503442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 2671406 - 2671188
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||     
T  2671406 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctttc--acaaatctgcacaagaacaca 2671309  T
Q  101 -taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
     || ||||||||||||||| || ||||||||||                   |||||||| ||||   ||||||||| ||||||||||| ||||||||||    
T  2671308 atatatactagtcttcctctgaagaaatcgtgt-------------------cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatac 2671228  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  2671227 ttaacgagcaagtttctaaatcgtgtcacgatttcccaag 2671188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 1306223 - 1306379
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacactt 101  Q
    ||||||||||||||||| ||   |||||||||||| |||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||    
T  1306223 ctacaaagacactcaactctagagttccctcctttataatccaagtttctctctctaagctcttccaagctctc-ctccaaaaactgcacaagaacactt 1306321  T
Q  102 aaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgattt 159  Q
    ||||||||||||||| | ||  ||||||||||||||||||||  ||||||||||||||    
T  1306322 aaatactagtcttccactgataaaatcgtgtcacgatttccaagtcgtgtcacgattt 1306379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 28501514 - 28501275
Alignment:
Q  4 acaaagacactcaacccttt-ggttccctcctttgtaatccaagtt---tctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacac 99  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||||   |||||||||||||||||||||||||||  |         ||||||| ||||    
T  28501514 acaaagacactcatcccttttggttccctcctttgttatccaagttctctctctctctaagctcttccaagctctccttcaaaaaa--gcacaagtacac 28501417  T
Q  100 t-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaagga 196  Q
      || ||||||||||||||| || | ||||||| ||||||||||  ||||||||||| ||||| ||| || ||||||||  ||| ||||||| ||| |||    
T  28501416 aatatatactagtcttcctctgaagcaatcgtgccacgatttcccaagatcgtgtcatgatttgcgtctgacccaaggtt-gacaagtccttatcaggga 28501318  T
Q  197 tacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||| ||||||||||||||||||||||||||||| |||||    
T  28501317 tacttaacgagcaagtttctgaatcgtgtcacgattttccaag 28501275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 4598829 - 4598981
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  4598829 ctgcacaagaacacttaagtactagtcttcctctgtttcaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 4598928  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||||||||||    
T  4598929 ccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttccca 4598981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 4601050 - 4601202
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  4601050 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 4601149  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||||||||||    
T  4601150 ccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttccca 4601202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 10058305 - 10058157
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||| ||||||||| | |||||||    
T  10058305 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacgaccagt 10058206  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  10058205 ccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 10058157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 10060527 - 10060379
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||| ||||||||| | |||||||    
T  10060527 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacgaccagt 10060428  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  10060427 ccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 10060379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 10062749 - 10062601
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||| ||||||||| | |||||||    
T  10062749 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacgaccagt 10062650  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  10062649 ccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 10062601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 10064971 - 10064823
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||| ||||||||| | |||||||    
T  10064971 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacgaccagt 10064872  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  10064871 ccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 10064823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 27352358 - 27352204
Alignment:
Q  86 ctgcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||||  || ||| ||| ||||||| || | ||||||| ||||||||||| ||||||||||||||| |||  ||||||||||| |||||||    
T  27352358 ctgcacaagaacacaatatatattagccttcctctgaagcaatcgtgccacgatttccaaatcgtgtcacgatttgcgtccgtcccaaggtatgaccagt 27352259  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||| |||| |||||||||||||||||||||||||||||||||||    
T  27352258 ccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaag 27352204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 23198251 - 23198399
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||| ||||||||||||||  |||||| ||| ||||||| ||||||    
T  23198251 ctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatttccaaatcgtgtcacgattggtacgtacgtcacaaggtacgaccag 23198350  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatt 232  Q
    ||||| ||  ||| |||||| ||||||||||   |||||||||||||||    
T  23198351 tccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgatt 23198399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 10056083 - 10055935
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  10056083 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 10055984  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  10055983 ccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 10055935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 10067193 - 10067045
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  10067193 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 10067094  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  10067093 ccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 10067045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 25637290 - 25637138
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  25637290 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 25637191  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||||||    
T  25637190 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca 25637138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 7782454 - 7782603
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||| | ||| | ||  |||||||||||||||||||||||||||||||||||  |||||  ||||||||| | ||||||    
T  7782454 ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatttccagatcgtgtcacgattggtacgttcgtcccaaggcacgaccag 7782553  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    ||||| ||| ||| |||||| ||||||||||   ||||||||||||||||    
T  7782554 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt 7782603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 10211256 - 10211108
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  10211256 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 10211157  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| ||||||||||||  ||||||||| |||||    
T  10211156 ccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattt 10211108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 23200450 - 23200598
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    |||||||| ||||||||||||| |||||||| | ||  |||||||||||||||||||| ||||||||||||||  |||||| ||| ||||||| ||||||    
T  23200450 ctgcacaaaaacacttaaataccagtcttccactgataaaatcgtgtcacgatttccaaatcgtgtcacgattggtacgtaagtcacaaggtacgaccag 23200549  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatt 232  Q
    ||||| ||  ||| |||||| ||||||||||   |||||||||||||||    
T  23200550 tccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgatt 23200598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 3617311 - 3617163
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | ||||||     
T  3617311 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagc 3617212  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    | || |||||||||||||| |||||||||||   |||||||||||||||    
T  3617211 cgttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 3617163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 6716361 - 6716210
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||| | |||||||||||||| |  |||||||||||||||||| ||| |||||||||||||   ||||   ||||||  | |||||||    
T  6716361 ctgcacaagaacacttta-tactagtcttcctctgttgaaatcgtgtcacgattttccaaatcgtgtcacgatccgcgtaccacccaagaaacgaccagt 6716263  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||||||    
T  6716262 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca 6716210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 32143668 - 32143816
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    |||||||||||||||||||||| |||||||  | ||  |||||||||||||||||||| ||||||||||||||  |||||| ||| ||||||| |||| |    
T  32143668 ctgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgatttccaaatcgtgtcacgattgatacgtacgtcacaaggtacgacctg 32143767  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatt 232  Q
    ||||| ||  | | |||||| ||||||||||   |||||||||||||||    
T  32143768 tccttatcttgaaaacttaacgagcaagtttgaaaatcgtgtcacgatt 32143816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 6718545 - 6718394
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttc-cagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||| | |||||||||||||| |  ||||||||||||||||||  || |||||||||||||   ||||   ||||||  | |||||||    
T  6718545 ctgcacaagaacacttta-tactagtcttcctctgttgaaatcgtgtcacgatttttcaaatcgtgtcacgatccgcgtaccacccaagaaacgaccagt 6718447  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||||||    
T  6718446 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca 6718394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 54634986 - 54634835
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||| | |||||| ||||||| |  | |||||||||||||||| ||  ||||||||| ||||| ||||   ||||||  |||||||||    
T  54634986 ctgcacaagaacacttta-tactagccttcctctgttgcaatcgtgtcacgattttcccaatcgtgtcatgatttgcgtaccacccaagaaaagaccagt 54634888  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||||||    
T  54634887 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca 54634835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 45282842 - 45282695
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||| | |||||| ||||||| |  |||||||||||||||||| ||  ||||||||||||| | ||||   ||||||  | |||||||    
T  45282842 ctgcacaagaacacttta-tactagccttcctctgttgaaatcgtgtcacgattttcccaatcgtgtcacgatctgcgtaccacccaagaaacgaccagt 45282744  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  45282743 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 45282695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 2672695 - 2672542
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  2672695 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 2672597  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  2672596 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 2672542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 18656752 - 18656905
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  18656752 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 18656850  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  18656851 ccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 18656905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 24968428 - 24968581
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||||| | | || ||||||||| ||||||||||  |||||||| |||||||| |    ||||| ||||  |||||||    
T  24968428 gcacaagaacactttaaatactagtcttgccctgaagaaatcgtgccacgatttccctagatcgtggcacgatttgcaacggtccccaggtt-gaccagt 24968526  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  || ||||||  ||||||||||||||||||||||||||||||||||    
T  24968527 ccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 24968581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 32475795 - 32475948
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | |||| ||||||||| ||||||||||  ||||||||||||||| | |    ||||| | | | |||||||    
T  32475795 gcacaagaacactttaaatactagtcctgcccagaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaag-atgaccagt 32475893  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  32475894 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 32475948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 10208996 - 10208908
Alignment:
Q  145 atcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    ||||||||||||||| |||  ||||||||| | ||||||||||| ||||||||| |||| ||||||||||||  |||||||||||||||    
T  10208996 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattt 10208908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 2676851 - 2676698
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  2676851 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 2676753  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  ||| |||||  ||||||||||||||||||||||||||||||||||    
T  2676752 ccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaag 2676698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 8512551 - 8512704
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| |   | |||||||||||| ||||||||||  ||||||||||||||| | |    ||||| | ||  |||||||    
T  8512551 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagtt-gaccagt 8512649  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  8512650 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 8512704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 8517431 - 8517584
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| |   | |||||||||||| ||||||||||  ||||||||||||||| | |    ||||| | ||  |||||||    
T  8517431 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagtt-gaccagt 8517529  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  8517530 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 8517584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 32480653 - 32480806
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | |  ||| ||||||||| ||||||||||  ||||||||||||||| | |    ||||| | | | |||||||    
T  32480653 gcacaagaacactttaaatactagtcctgcctagaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaag-atgaccagt 32480751  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  32480752 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 32480806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 800963 - 800811
Alignment:
Q  87 tgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||||| ||| | ||  | ||  |||||||||||||||||||||  ||||||||||||  | |||  ||||||||  | ||||| |    
T  800963 tgcacaagaacacttaaatattagccctctactgataaaatcgtgtcacgatttccaggccgtgtcacgattggtgcgttcgtcccaagaaacgaccatt 800864  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| ||| ||| |||||| ||||||||||   ||||||||||||||||||||    
T  800863 ccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccca 800811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 182
Target Start/End: Original strand, 27453235 - 27453401
Alignment:
Q  8 agacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacacttaaatac 107  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||||         ||||||||||         ||||||||||||||||||| ||    
T  27453235 agacactcaaccctaaagttccctcctttgtaatccaagtttctctctctt--------caagctctct--tcaaaaactgcacaagaacacttaaaaac 27453324  T
Q  108 tagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagacca 182  Q
    ||||||||  | ||  |||||||| ||||||||||| ||||||||||||||  |||||| ||| ||||||| |||||    
T  27453325 tagtcttcaactgataaaatcgtgccacgatttccaaatcgtgtcacgattgatacgtacgtcacaaggtacgacca 27453401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 27986271 - 27986216
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  27986271 ctacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 27986216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 22172846 - 22172785
Alignment:
Q  178 gaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||||| |||  ||| ||||| |||||||||||||||||||||||||||||||||||    
T  22172846 gaccagtccttatcagagatccttaacgagcaagtttctgaatcgtgtcacgatttcccaag 22172785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 1736119 - 1736064
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  1736119 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 1736064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 8370304 - 8370249
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  8370304 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 8370249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 21711493 - 21711548
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  21711493 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 21711548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 27974767 - 27974712
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  27974767 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 27974712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 32143594 - 32143649
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||||||||||||||||||||| |||||||||||    
T  32143594 ctacaaagacactcaaccctagagttccctcctttgtaatccaaatttctctctct 32143649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 33386490 - 33386435
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   |||| ||||||||||||||||||||||||||||    
T  33386490 ctacaaagacactcaaccctaaagttctctcctttgtaatccaagtttctctctct 33386435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 37725946 - 37726001
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  37725946 ctacaaagacactcaaccctaaagtttcctcctttgtaatccaagtttctctctct 37726001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 39032370 - 39032315
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  39032370 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 39032315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 40592597 - 40592542
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  40592597 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 40592542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 6794530 - 6794473
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    |||||| |||||||||||||   ||| |||||||||||||||||||||||||||||||    
T  6794530 ctacaatgacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaa 6794473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 48438486 - 48438539
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctct 55  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||    
T  48438486 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctct 48438539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 1306400 - 1306480
Alignment:
Q  159 tacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||||| ||| ||||||| |||| |||||| ||  ||| |||||| ||||||||||  |||||||||||||||||||||||    
T  1306400 tacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgagaatcgtgtcacgatttcccaag 1306480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 33386415 - 33386343
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt 158  Q
    |||||||||||||||||||||| |||||||  | ||  |||||||| ||| ||||||| ||||||||||||||    
T  33386415 ctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacaatttccaaatcgtgtcacgatt 33386343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 24694981 - 24694926
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| ||||||||||||||||| |||||||||||    
T  24694981 ctacaaagacactcaaccctaaagttacctcctttgtaatccaaatttctctctct 24694926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 26928414 - 26928359
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   |||||||| |||||||||||||||| |||||||    
T  26928414 ctacaaagacactcaaccctagagttccctcgtttgtaatccaagtttttctctct 26928359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 47923719 - 47923664
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||||| |||   ||| |||||||||||||||||||||||||||||    
T  47923719 ctacaaagacactcaatcctaaagttacctcctttgtaatccaagtttctctctct 47923664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 16264621 - 16264671
Alignment:
Q  3 tacaaagacactcaaccctttggttccctcctttgtaatccaagtttctct 53  Q
    |||||||||||||||||||   ||| |||||||||||||||||||||||||    
T  16264621 tacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctct 16264671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 22173054 - 22172985
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctct 74  Q
    ||||||||||||||||| |||||||||| |||||  ||||||| |||||| ||||||||| | ||||||||    
T  22173054 acaaagacactcaacccattggttccctactttgctatccaag-ttctctttctaagctcatacaagctct 22172985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 27026978 - 27027032
Alignment:
Q  3 tacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||||||||   ||| ||||||||||||||||||||| |||||||    
T  27026978 tacaaagacactcaaccctaaagttacctcctttgtaatccaagtttttctctct 27027032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 1417306 - 1417249
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||||||   ||| ||||||||||||| ||||||| |||||||||    
T  1417306 ctacaaagacactcaaccctaaagttacctcctttgtaattcaagtttttctctctaa 1417249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 26299259 - 26299316
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||| ||||||||   ||| |||||||| ||||||||||||||||||||||    
T  26299259 ctacaaagacattcaaccctaaagttacctcctttataatccaagtttctctctctaa 26299316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 37466566 - 37466623
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||| | ||   ||| |||||||||||||||||||||||||||||||    
T  37466566 ctacaaagacactcagctctaaagttacctcctttgtaatccaagtttctctctctaa 37466623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 25929211 - 25929159
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    ||||||||||||||||||||   ||| |||||||||||||| |||||||||||    
T  25929211 ctacaaagacactcaaccctaaagttacctcctttgtaatctaagtttctctc 25929159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 182
Target Start/End: Complemental strand, 37408310 - 37408215
Alignment:
Q  89 cacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagacca 182  Q
    |||||||||||||| |||| |||||||  ||||  ||||| ||| |||||||||| |||||| |||||||  |||||| | ||||||||| |||||    
T  37408310 cacaagaacacttatataccagtcttcagcagataaaatcttgttacgatttccaaatcgtgccacgattgatacgtacgacccaaggtacgacca 37408215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 36029364 - 36029415
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctct 53  Q
    ||||||||||||||||||||    || |||||||||||||||||||||||||    
T  36029364 ctacaaagacactcaaccctaaatttacctcctttgtaatccaagtttctct 36029415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 40844926 - 40844977
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctct 53  Q
    ||||||||||||||||||||   ||| |||||||||||||| ||||||||||    
T  40844926 ctacaaagacactcaaccctaaagttacctcctttgtaatctaagtttctct 40844977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 3323502 - 3323449
Alignment:
Q  6 aaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||   ||| |||||||||||||| |||||| |||||||||    
T  3323502 aaagacactcaaccctaaagttacctcctttgtaatcgaagtttgtctctctaa 3323449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 3328172 - 3328115
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||| ||||||||   |||  ||||||| ||||||||||||||||||||||    
T  3328172 ctacaaagacattcaaccctaaagttatctcctttctaatccaagtttctctctctaa 3328115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 22172957 - 22172884
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgattt 159  Q
    ||||||||||||  || ||||||||||||||| || ||||||||| |||||||| ||| |||||| ||||||||    
T  22172957 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaaatcgtgccacgattt 22172884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 26928340 - 26928287
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatt 139  Q
    |||||||||||||||||||||| |||||||  | ||  ||||||||||||||||    
T  26928340 ctgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgatt 26928287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Complemental strand, 10209036 - 10209004
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctc 118  Q
    |||||||||||||||||| ||||||||||||||    
T  10209036 ctgcacaagaacacttaagtactagtcttcctc 10209004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 23410568 - 23410624
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaat-ccaagtttctctctct 57  Q
    ||||||||||||||||||||   |||| |||||||| ||| ||||||||||||||||    
T  23410568 ctacaaagacactcaaccctaaagttctctcctttgcaatcccaagtttctctctct 23410624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 25796053 - 25796113
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaat-ccaagtttctctctctaagc 61  Q
    ||||||||||||||||||||   ||| ||||||||||| | ||||||||||||||| ||||    
T  25796053 ctacaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctcaaagc 25796113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 1e-77; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 9296222 - 9295985
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||         |||||||||||||    
T  9296222 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttttctctctaagctcttccaagctctc-ctccaaaaaa-gcacaagaacact 9296125  T
Q  101 t-aaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
    | ||||||||||||||||| || | |||||||||||||||| |||||||||||||||||| |||  | ||||||||| ||||||||||| ||||||||||    
T  9296124 ttaaatactagtcttcctctgaagcaatcgtgtcacgattttcagatcgtgtcacgatttgcgtccgacccaaggtatgaccagtccttatcaaggatac 9296025  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9296024 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 9295985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 14291765 - 14292002
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||     
T  14291765 tctacaaagacgctcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctaaaat--ctgcacaagaacaca 14291862  T
Q  101 -taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
     || ||||||||||||||| || ||||||||| ||||||||||||||||||||||||||| ||||   ||||||||| ||||||||||| |||  | |||    
T  14291863 atatatactagtcttcctctgaagaaatcgtgccacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcagtggtac 14291962  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  14291963 ttaacgagcaagtttctgaatcgtgtcacgatttcccaag 14292002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 11098747 - 11098510
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||       ||||||||||||||     
T  11098747 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctct-tctacaaat-ctgcacaagaacaca 11098650  T
Q  101 -taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
     || || |||||||||||| || ||||||||| ||||||||||||||||||||||||||| ||||   ||||||||  ||||||||||| |||  |||||    
T  11098649 atatatgctagtcttcctctgaagaaatcgtgccacgatttccagatcgtgtcacgatttgcgtacaacccaaggtttgaccagtccttatcagtgatac 11098550  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  11098549 ttaacgagcaagtttctaaatcgtgtcacgatttcccaag 11098510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 25409903 - 25410142
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||||||||||  ||       |||||||||||||||    
T  25409903 tctacaaagacactcaaccctagtgttccctcctctgtaatccaagtttctctctctaagctcttccaagctcta-cttcaaaatctgcacaagaacact 25410001  T
Q  101 taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggata 198  Q
    ||||||  |  ||||||| ||  |||| |||||||||||||||  |||||||||||||  |||||| ||| ||||||| ||||| ||||| |||||||||    
T  25410002 taaatatcatccttcctctgataaaattgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgaccattccttatcaaggata 25410101  T
Q  199 cttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||| ||||||||||   ||||||||||||||||||||||    
T  25410102 cttaacgagcaagtttgaaaatcgtgtcacgatttcccaag 25410142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 3492025 - 3492253
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctct--tccaagctctctctnnnnnnnctgcacaagaacac 99  Q
    ||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||| |  |||||  |||             ||||||||||||    
T  3492025 ctacaaagacactcaaccctagatttccctcctttgtaatccaagtttctctctctaagctttactccaaaatct-------------gcacaagaacac 3492111  T
Q  100 ttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggat 197  Q
    ||||||||||||||||| | ||  |||| |||||||||||||||  |||||||||||||  |||||| ||| ||||||| |||| |||||| ||  |||     
T  3492112 ttaaatactagtcttccactgataaaattgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaa 3492211  T
Q  198 acttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  3492212 acttaacgagcaagtttcagaatcgtgtcacgatttcccaag 3492253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 4484644 - 4484792
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||| ||||| | ||  |||||||||||||||||||||||||||||||||||  |||||| ||||||||||| ||||||    
T  4484644 ctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatttccagatcgtgtcacgattggtacgtacgtcccaaggtacgaccag 4484743  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatt 232  Q
    ||||| |||  || |||||| ||||||||||   |||||||||||||||    
T  4484744 tccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgatt 4484792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 12647690 - 12647842
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  12647690 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 12647789  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| |||||||||| || |||||||||||||||||||    
T  12647790 ccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttccca 12647842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 239
Target Start/End: Complemental strand, 30833200 - 30833045
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||  |||||||||||||  |||||| ||| ||||||| |||| |    
T  30833200 ctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctg 30833101  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||| ||  ||| |||||| ||||||||||   ||||||||||||||||||||||    
T  30833100 tccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaag 30833045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 32289427 - 32289279
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||| | ||| | ||  ||||||||||||||||||||| |||||||||||||    |||| ||||||||||| ||||||    
T  32289427 ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatttccaggtcgtgtcacgattggagcgtacgtcccaaggtacgaccag 32289328  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatt 232  Q
    ||||| ||| ||| |||||| ||||||||||   |||||||||||||||    
T  32289327 tccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatt 32289279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 6266553 - 6266400
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||| | ||| | ||  ||||||||||||||||||||| |||||||||||||  | |||  ||||||||  | |||||     
T  6266553 ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatttccaggtcgtgtcacgattggtgcgttcgtcccaagaaacgaccat 6266454  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    ||||| ||| ||| |||||| ||| ||||||   ||||||||||||||||||||    
T  6266453 tccttatcatggaaacttaacgagtaagtttgcaaatcgtgtcacgatttccca 6266400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 39811753 - 39811600
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||||||||| || ||||||||| ||||||||||  ||||||||||||||| | |    | ||||||| | ||| |||    
T  39811753 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggccccaaggca-gacaagt 39811655  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  39811654 ccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 39811600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 86 - 214
Target Start/End: Original strand, 40739178 - 40739308
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    |||||||||||||||||||||| |||||||  | ||  |||||||||||||||||||| ||||||||||||||  |||||| ||| ||||||| |||| |    
T  40739178 ctgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgatttccaaatcgtgtcacgattgatacgtacgtcacaaggtacgacctg 40739277  T
Q  184 tccttgtcaaggatacttaatgagcaagttt 214  Q
    ||||| ||  | | |||||| ||||||||||    
T  40739278 tccttatcctgaaaacttaacgagcaagttt 40739308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 19344733 - 19344886
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | | || ||||||||| ||||||||||  ||||||||||| ||| | |    ||||| ||||  |||||||    
T  19344733 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcatgatctgcaacggtccccaggtt-gaccagt 19344831  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  19344832 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 19344886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 19349591 - 19349744
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||  ||||  |||||||    
T  19349591 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtcctcaggtt-gaccagt 19349689  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  | ||||||||||||||||||||||||||||||||    
T  19349690 ccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaag 19349744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 14698835 - 14698778
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||    
T  14698835 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaa 14698778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 33118406 - 33118463
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||    
T  33118406 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaa 33118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 40739105 - 40739158
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctct 55  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  40739105 ctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctct 40739158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 33528450 - 33528395
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  33528450 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 33528395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 233
Target Start/End: Original strand, 32247097 - 32247244
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||| ||| | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  32247097 gcacaagaacacaatatatactagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 32247195  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    | || |||  ||||||||| |||||||||||||||||||| ||||||||    
T  32247196 ctttatcagtgatacttaacgagcaagtttctgaatcgtgccacgattt 32247244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 20522493 - 20522548
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||| ||||||||||||||    
T  20522493 ctacaaagacactcaaccctaaagttacctcctttgtaatctaagtttctctctct 20522548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 28258999 - 28258948
Alignment:
Q  6 aaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  28258999 aaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 28258948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 10445293 - 10445236
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||| ||||||||   ||| |||||||||||||| ||||||||||||||||    
T  10445293 ctacaaagacattcaaccctaaagttacctcctttgtaatctaagtttctctctctaa 10445236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 21630216 - 21630268
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    ||||||||||||||||| ||   ||| ||||||||||||||||||||||||||    
T  21630216 ctacaaagacactcaacactaaagttacctcctttgtaatccaagtttctctc 21630268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 34389122 - 34389174
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    |||||||||||| |||||||   ||| ||||||||||||||||||||||||||    
T  34389122 ctacaaagacacacaaccctaaagttacctcctttgtaatccaagtttctctc 34389174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 36757588 - 36757536
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    ||||||||||||||||||||   ||| ||||||||||||| ||||||||||||    
T  36757588 ctacaaagacactcaaccctaaagttacctcctttgtaattcaagtttctctc 36757536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 8389975 - 8389920
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||| |||||||||   |||  ||||||||||||||||||||||||||||    
T  8389975 ctacaaagaccctcaaccctaaagttatctcctttgtaatccaagtttctctctct 8389920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 17865476 - 17865522
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtt 48  Q
    ||||||||||||||||||||   ||| ||||||||||||||||||||    
T  17865476 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtt 17865522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 23078295 - 23078245
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    |||||||||||||||||    ||| ||||||||||||||||||||||||||    
T  23078295 acaaagacactcaacccaaaagttacctcctttgtaatccaagtttctctc 23078245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 31056316 - 31056376
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaat-ccaagtttctctctctaagc 61  Q
    ||||||||||||||||||||   ||| ||||||||||| | ||||||||||||||| ||||    
T  31056316 ctacaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctcaaagc 31056376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 34682157 - 34682097
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaat-ccaagtttctctctctaagc 61  Q
    ||||||||||||||||||||   ||| ||||||||||| | ||||||||||||||| ||||    
T  34682157 ctacaaagacactcaaccctaaagttacctcctttgtattcccaagtttctctctcaaagc 34682097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 39811848 - 39811773
Alignment:
Q  4 acaaagacactcaaccc-tttggttccctcctttgtaatccaagtttctctct-ctaagctcttccaagctctctct 78  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| |||||| | | |||||| | ||||||||||||    
T  39811848 acaaagacactcaacccatttggttccctcctttgctatccaag-ttctctgtacaaagctcatacaagctctctct 39811773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 24742217 - 24742454
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||     
T  24742217 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc-ctacaaat-ctgcacaagaacaca 24742314  T
Q  101 -taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
     || ||||||||||||||| || |||||||||||||||||||||||||||| |||||||| |||  || || ||||| ||||||||||| ||||||||||    
T  24742315 atatatactagtcttcctctgaagaaatcgtgtcacgatttccagatcgtggcacgatttgcgtccgttcccaggtatgaccagtccttatcaaggatac 24742414  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  24742415 ttaacgagcaagtttctgaatcgtgtcacgatttcccaag 24742454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 86 - 238
Target Start/End: Original strand, 13992600 - 13992754
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||  |||||| ||| ||||||| ||||||    
T  13992600 ctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatttccagatcgtgtcacgattgatacgtacgtcacaaggtatgaccag 13992699  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 238  Q
    ||||| ||| | | |||||| ||||||||||   |||||||||||||||||||||    
T  13992700 tccttatcatgaaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaa 13992754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 29760918 - 29761135
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacac- 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |        ||||||||||||||     
T  29760918 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctcactctaagttcttccaagctctccc---caaatctgcacaagaacaca 29761014  T
Q  100 ttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
     || ||||||||||||||| || ||||||||| ||||||||       | |||        ||||    |||||||| ||||||||||| ||||||||||    
T  29761015 atatatactagtcttcctctgaagaaatcgtgccacgattt-------gcgtc--------cgta----ccaaggtatgaccagtccttatcaaggatac 29761095  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  29761096 ttaacgagcaagtttctgaatcgtgtcacgatttcccaag 29761135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 7122544 - 7122392
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  7122544 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 7122445  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  7122444 ccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttccca 7122392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 56141788 - 56141635
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||||||||| || ||||||||| ||||||||||  ||||||||||||||||| | | || ||||||||| |||||||    
T  56141788 gcacaagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaagatcgtgtcacgatttgcatctgacccaaggta-gaccagt 56141690  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| ||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  56141689 ccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 56141635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 159
Target Start/End: Complemental strand, 28468360 - 28468202
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacactt 101  Q
    ||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||    
T  28468360 ctacaaagacacttaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc-ctccaaaatctgcacaagaacactt 28468262  T
Q  102 aaa---tactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgattt 159  Q
    |||   |||||||||||| | ||  |||||||||||||||||  | |||||||||||||||    
T  28468261 aaatactactagtcttccactgataaaatcgtgtcacgattt-aaaatcgtgtcacgattt 28468202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 5135927 - 5135779
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt--ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccag 183  Q
    |||||||||||||||||| |||||||||||||| |    ||||||||||||||||  ||| ||||||||||||||| |||  ||||||||| | |||| |    
T  5135927 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgtcca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccgg 5135829  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    ||||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  5135828 tccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 5135779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 5138153 - 5138005
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt--ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccag 183  Q
    |||||||||||||||||| |||||||||||||| |    ||||||||||||||||  ||| ||||||||||||||| |||  ||||||||| | |||| |    
T  5138153 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgtcca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccgg 5138055  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    ||||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  5138054 tccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 5138005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 9229053 - 9228809
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnct--------gcacaaga 95  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||| | ||||||||||         ||        ||||||||    
T  9229053 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagctcatacaagctctcttaagattcacttcaaaaaagcacaaga 9228955  T
Q  96 acac-ttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtca 192  Q
    ||||  || ||||||||||||||| || ||||||||| ||||||||||  ||||||||||||||| | |    | |||||||| |||| ||||||| |||    
T  9228954 acacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggt-agacaagtccttatca 9228856  T
Q  193 aggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
      ||||||||| |||||||||||||||||||||||||||||||||||    
T  9228855 gtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 9228809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 8393258 - 8393111
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||| | |||||| ||||||| |  |||||||||||||||||||| | ||||||||||||| | ||||   ||||||  |||||||||    
T  8393258 ctgcacaagaacacttta-tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaaagaccagt 8393160  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| ||| |||||||||| ||||||||||||| |||||||||||||||    
T  8393159 ccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattt 8393111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 51520775 - 51520927
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtc 185  Q
    ||||||||||||  || ||||||| ||||||| || | ||| ||| |||||||||| | ||||||||||||||| ||| || ||||||||| || |||||    
T  51520775 gcacaagaacacaatatatactagccttcctctgaagcaattgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gatcagtc 51520873  T
Q  186 cttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||    
T  51520874 cttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaag 51520927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 9224266 - 9224022
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnct--------gcacaaga 95  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||| | ||||||||||         ||        ||| ||||    
T  9224266 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagctcatacaagctctcttaagattcacttcaaaaaagcagaaga 9224168  T
Q  96 acac-ttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtca 192  Q
    ||||  || ||||||||||||||| || ||||| ||| ||||||||||  ||||||||||||||| | |    | |||||||| |||| ||||||| |||    
T  9224167 acacaatatatactagtcttcctctgaagaaattgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggt-agacaagtccttatca 9224069  T
Q  193 aggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
      ||||||||| |||||||||||||||||||||||||||||||||||    
T  9224068 gtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 9224022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 8395467 - 8395320
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||| | |||||| ||||||| |  |||||||||||||||||||| | ||||||||||||| | ||||   ||||||  | |||||||    
T  8395467 ctgcacaagaacacttta-tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagt 8395369  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| ||| |||||||||| ||||||||||||| || ||||||||||||    
T  8395368 ccttatcacggatacttaacgagcaagtttctggattgtgtcacgattt 8395320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 31495623 - 31495776
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||| ||| | ||| | ||  ||||||||||||||||||||| | |||||||||||  | |||  ||||||||  | ||||||    
T  31495623 ctgcacaagaacacttaaatattagccctccactgataaaatcgtgtcacgatttccaggttgtgtcacgattggtgcgttcgtcccaagaaacgaccag 31495722  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    ||||| ||| ||| |||||| ||||||||||   ||||||||||||||||||||    
T  31495723 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccca 31495776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 31985385 - 31985236
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||||||||  | ||  |||||||| ||||||||||| ||||||||||||||  | |||| ||| ||||||| ||||||    
T  31985385 ctgcacaagaacacttaaatactagtcttcaactgataaaatcgtgccacgatttccaaatcgtgtcacgattgatgcgtacgtcacaaggtacgaccag 31985286  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    ||||| ||  | | ||||||  |||||||||   ||||||||||||||||    
T  31985285 tccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattt 31985236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 45357074 - 45356921
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||| ||| |||| ||||||||||||||||||||  ||||||||||||||| | |    || || ||||  |||||||    
T  45357074 gcacaagaacacaatatatactagtcctccccagaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggttcccaggtt-gaccagt 45356976  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  45356975 ccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 45356921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 7124673 - 7124614
Alignment:
Q  178 gaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  7124673 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttccca 7124614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 239
Target Start/End: Original strand, 5732987 - 5733123
Alignment:
Q  104 atactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatactt 201  Q
    ||||||||| ||| | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  ||||||||||| |||  |||||||    
T  5732987 atactagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagtccttatcagtgatactt 5733085  T
Q  202 aatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||  ||||||||||||||||||||||||||||||||||    
T  5733086 aaccagcaagtttctgaatcgtgtcacgatttcccaag 5733123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 18712531 - 18712378
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||||||| | || ||||||||| |||||||| |  |||| |||||||||| | |    | ||||||||  ||| |||    
T  18712531 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgattttcctagattgtgtcacgatcttcaacggacccaaggtt-gacaagt 18712433  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  18712432 ccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 18712378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 18856033 - 18856186
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||||||| | || ||||||||| ||||||||||  ||||| ||||||||| | |    || || ||||  |||||||    
T  18856033 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcatgtcacgatctgcaacggttcccaggtt-gaccagt 18856131  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  18856132 ccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 18856186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 45347593 - 45347440
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || |||||||| |||| | || ||||||||| ||||||||||  ||||||||||||||| | |    || || ||||  |||||||    
T  45347593 gcacaagaacacaatatatactagttttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggttcccaggtt-gaccagt 45347495  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  45347494 ccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 45347440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 238
Target Start/End: Original strand, 3814330 - 3814482
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||||||| | || ||||||||||||||||||||  ||||| ||||||||| | |    || |  ||||  |||||||    
T  3814330 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgtcacgatttccctagatcttgtcacgatctgcaacggttctcaggtt-gaccagt 3814428  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 238  Q
    |||| |||  |||||||||  |||||||||||||||||||||||||||||||||    
T  3814429 ccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaa 3814482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 51520683 - 51520754
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctct 76  Q
    ||||||||||||||||| |||||||||||||||   ||||||| |||||||||||||||| | ||||||||||    
T  51520683 acaaagacactcaacccattggttccctccttttctatccaag-ttctctctctaagctcattcaagctctct 51520754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 3777820 - 3777875
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  3777820 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 3777875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 5269026 - 5268971
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  5269026 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 5268971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 16623119 - 16623064
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  16623119 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 16623064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 54867450 - 54867505
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  54867450 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 54867505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 10047653 - 10047707
Alignment:
Q  3 tacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  10047653 tacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 10047707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 31985458 - 31985404
Alignment:
Q  3 tacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||| ||||||||||||   |||||||||||||||||||||||||||||||||    
T  31985458 tacaaaaacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 31985404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 25861859 - 25861802
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||||||   ||| ||| |||||||||||||||||||||||||||    
T  25861859 ctacaaagacactcaaccctaaagttaccttctttgtaatccaagtttctctctctaa 25861802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 28468196 - 28468101
Alignment:
Q  146 tcgtgtcacgattt--acgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||||||||  ||||| ||| ||||||| ||||||||||| |||  || |||||| ||||||||||   |||||||||||||||| |||||    
T  28468196 tcgtgtcacgatttgtacgtacgtcacaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgaaaatcgtgtcacgattttccaag 28468101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 5396497 - 5396442
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||  |||||||||||||||||||||||||||||    
T  5396497 ctacaaagacactcaaccctaaagtaacctcctttgtaatccaagtttctctctct 5396442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 6743241 - 6743186
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||||| |||   ||| |||||||||||||||||||||||||||||    
T  6743241 ctacaaagacactcaaacctcaagttacctcctttgtaatccaagtttctctctct 6743186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 8689322 - 8689270
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    ||||||||||||| ||||||   ||| ||||||||||||||||||||||||||    
T  8689322 ctacaaagacactaaaccctaaagttacctcctttgtaatccaagtttctctc 8689270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 18712625 - 18712581
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtt 48  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||    
T  18712625 acaaagacactcaacccattggttccctcctttgctatccaagtt 18712581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36315057 - 36315001
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||| ||||||   ||| ||||||||||||||||||||| |||||||    
T  36315057 tctacaaagacactaaaccctaaagttacctcctttgtaatccaagtttatctctct 36315001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36329266 - 36329210
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||| ||||||   ||| ||||||||||||||||||||| |||||||    
T  36329266 tctacaaagacactaaaccctaaagttacctcctttgtaatccaagtttatctctct 36329210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 5143531 - 5143582
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctct 53  Q
    ||||||||||||||||||||   ||| |||||| ||||||||||||||||||    
T  5143531 ctacaaagacactcaaccctaaagttacctcctctgtaatccaagtttctct 5143582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 16628698 - 16628643
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| ||||||||| ||||||| |||||||||||    
T  16628698 ctacaaagacactcaaccctaaagttacctcctttgcaatccaattttctctctct 16628643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 42599400 - 42599344
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    |||||||||||||||||| |   ||| |||||||||||||||||||||||||| ||||    
T  42599400 ctacaaagacactcaacc-taaagttacctcctttgtaatccaagtttctctcactaa 42599344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 5147949 - 5148001
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    ||||||||||||| ||||||   ||| |||||| |||||||||||||||||||    
T  5147949 ctacaaagacactaaaccctaaagttacctcctgtgtaatccaagtttctctc 5148001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 5674590 - 5674353
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||       |||||||||||||||    
T  5674590 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttatctctctaagctcttccaagctctc-ctccaaat-ctgcacaagaacact 5674493  T
Q  101 t-aaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
    | ||||||||| ||||||| ||   ||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| ||| ||||||    
T  5674492 ttaaatactagccttcctctgatacaatcgtgtcacgatttccagatcgtgtcacgatttgcgtacgtcccaaggtatgaccagtccttatcacggatac 5674393  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||||||||||  ||||||||||||||||||||||    
T  5674392 ttaacgagcaagtttcaaaatcgtgtcacgatttcccaag 5674353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 22709281 - 22709521
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct--aagctcttccaagctctctctnnnnnnnctgcacaagaacac 99  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||| |||||||  || ||||||||| ||||  ||       ||||||||||||||    
T  22709281 ctacaaagacactcaaccctagagttccctcctttgtaatccaagtttttctctcttcaaactcttccaaactcta-ctccaaaatctgcacaagaacac 22709379  T
Q  100 ttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgattt--acgtatgtcccaaggtaagaccagtccttgtcaaggat 197  Q
    ||||||||||||||||| |  |  ||||||||||||||||||||  ||||||||||||||  | ||| ||| ||||||| ||||||||||| ||| |||     
T  22709380 ttaaatactagtcttccactaataaaatcgtgtcacgatttccaagtcgtgtcacgatttgtatgtacgtcacaaggtacgaccagtccttatcatggaa 22709479  T
Q  198 acttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||||| ||||||||||   ||||||||||||||||||||||    
T  22709480 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaag 22709521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 33342410 - 33342562
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  33342410 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 33342509  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||||||||||    
T  33342510 ccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttccca 33342562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 34166944 - 34166796
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||| ||||||||| | |||||||    
T  34166944 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtacgtcccaaggaacgaccagt 34166845  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  34166844 ccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 34166796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 6027111 - 6026963
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||| ||    
T  6027111 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccggt 6027012  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||    
T  6027011 ccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattt 6026963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 34164722 - 34164574
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt--ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccag 183  Q
    |||||||||||||||||| |||||||||||||| |    ||||||||||||||||  ||| ||||||||||||||| |||  ||||||||| | ||||||    
T  34164722 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgtcca-atcgtgtcacgatttgcgtccgtcccaaggaacgaccag 34164624  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    ||||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  34164623 tccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 34164574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 6136271 - 6136422
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||| ||||||||||||||||||||| |    |||||||||||||||| ||  || |||||||||||| | |  ||||||||| | |||||||    
T  6136271 ctgcacaagaa-acttaaatactagtcttcctctgttccaatcgtgtcacgattttcccaattgtgtcacgatttgcttccgtcccaaggaacgaccagt 6136369  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  6136370 ccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttccca 6136422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 5266455 - 5266549
Alignment:
Q  145 atcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||||||||| |||  ||  ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5266455 atcgtgtcacgatttgcgtccgtttcaaggtatgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 5266549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 22010556 - 22010312
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnct--------gcacaaga 95  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||| | ||||||||||         ||        ||||||||    
T  22010556 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagctcatacaagctctcttaagttcttcttcaaaaaagcacaaga 22010458  T
Q  96 acac-ttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtca 192  Q
    ||||  || |||||||||| |||| || ||||||||| ||||||||||  ||||||||||||||||| |    | |||||||| |||| ||||||| |||    
T  22010457 acacaatatatactagtctccctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatttgcaacggacccaaggt-agacaagtccttatca 22010359  T
Q  193 aggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
      ||||||||| |||||||||||||||||||||||||||||||||||    
T  22010358 gtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 22010312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 25421168 - 25421020
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||| ||||||||||| |||  ||||||||| | |||||||    
T  25421168 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcatgtcacgatttgcgtccgtcccaaggaacgaccagt 25421069  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  25421068 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 25421020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 235
Target Start/End: Original strand, 3073064 - 3073215
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||| | ||| | ||  |||||||||||||||||||||||||||| ||||||  | | |   |||||||||| ||||||    
T  3073064 ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatttccagatcgtgtaacgattagtgcatccatcccaaggtatgaccag 3073163  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcc 235  Q
    ||||| ||| ||| |||||| ||||||||||   ||||||||||||||||||    
T  3073164 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcc 3073215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 411965 - 411811
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtat--gtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||  | ||||| | ||  ||||||||||||||||||| ||| |||||||||||   | ||  ||||||||||| ||||||    
T  411965 ctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgatttcctgattgtgtcacgattggtgcatccgtcccaaggtatgaccag 411866  T
Q  184 tccttgtcaaggatacttaatgagcaagttt-ctgaatcgtgtcacgatttccca 237  Q
    ||||| ||| ||| |||||| |||||||||| |  ||||||||||||||||||||    
T  411865 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttccca 411811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 16839054 - 16839207
Alignment:
Q  88 gcacaagaacacttaa-atactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| | ||||||||| | | | || ||||||||||||||||||||  ||||||||||||||| | |    ||||||||||  |||||||    
T  16839054 gcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggtt-gaccagt 16839152  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  16839153 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 16839207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 13151067 - 13150979
Alignment:
Q  145 atcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    ||||||||||||||| |||  ||||||||| | ||||||||||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  13151067 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 13150979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 16554730 - 16554583
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||| || | |||||| ||||||| |  |||||||||||||||||||| | ||||||||||||| | ||||   ||||||  | |||||||    
T  16554730 ctgcacaagaacaattta-tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagt 16554632  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  16554631 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 16554583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 16631286 - 16631139
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||| || | |||||| ||||||| |  |||||||||||||||||||| | ||||||||||||| | ||||   ||||||  | |||||||    
T  16631286 ctgcacaagaacaattta-tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagt 16631188  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  16631187 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 16631139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 6005730 - 6005883
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  6005730 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 6005828  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  6005829 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 6005883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 33330209 - 33330056
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  33330209 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 33330111  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  33330110 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 33330056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 11857200 - 11857444
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctct---------ctnnnnnnnctgcacaag 94  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||| | ||||||||||         |          |||||||    
T  11857200 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagctcattcaagctctcttaagttctcccagtaaaaaagcacaag 11857298  T
Q  95 aacac-ttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtca 192  Q
    |||||  || ||||||||||||||| || ||||||||| |||||||| ||| ||||||||||||||| |    | ||||||||  ||| ||||||| |||    
T  11857299 aacacaatatatactagtcttcctctgaagaaatcgtgccacgatttcccaaatcgtgtcacgatttgcaacggacccaaggt-tgacaagtccttatca 11857397  T
Q  193 aggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
      | ||||||| |||||||||||| ||||||||||||||||||||||    
T  11857398 gtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaag 11857444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 16578825 - 16578972
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||| || | |||||  ||||||| |  |||||||||||||||||||| | ||||||||||||| | ||||   ||||||  | |||||||    
T  16578825 ctgcacaagaacaattta-tactacccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagt 16578923  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  16578924 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 16578972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 16616555 - 16616408
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||| || | |||||  ||||||| |  |||||||||||||||||||| | ||||||||||||| | ||||   ||||||  | |||||||    
T  16616555 ctgcacaagaacaattta-tactacccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagt 16616457  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  16616456 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 16616408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 16652973 - 16652826
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||| || | |||||| ||||||| |  |||||||||||||||||||| | ||||||||||||| | ||||   ||||||  | |||||||    
T  16652973 ctgcacaagaacaattta-tactagccttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccacccaagaaacgaccagt 16652875  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   || ||||||||||||    
T  16652874 ccttatcaaggatacttaacgagcaagtttcacgattgtgtcacgattt 16652826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 233
Target Start/End: Complemental strand, 25421034 - 25420926
Alignment:
Q  126 atcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtg 224  Q
    ||||||||||||||| ||  ||| ||||||||||| |||  ||||||||| | ||||||||||| |||||||||||||| |||||||||||   ||||||    
T  25421034 atcgtgtcacgattttcccaatcatgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtg 25420935  T
Q  225 tcacgattt 233  Q
    |||||||||    
T  25420934 tcacgattt 25420926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 28155347 - 28155194
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||| ||| | || ||||||||||||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  28155347 gcacaagaacacaatatatactagtcctcccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 28155249  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  |||||||||||| |||||||||||||||||||||    
T  28155248 ccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaag 28155194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 33335706 - 33335553
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||| |||||||| ||||||||||| | | | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  33335706 gcacatgaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 33335608  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  33335607 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 33335553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 14737436 - 14737189
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc------tctnnnnnnnc-----tgcaca 92  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| |||||| | |||||||||      |||       |      |||||    
T  14737436 acaaagacactcaacccattggttccctcctttgttatccaag-ttctctctcaaagctcatacaagctctcttaagttctctttctccaaaaaagcaca 14737338  T
Q  93 agaacac-ttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttg 189  Q
    |||||||  || ||||||||||||| | || ||||||||| ||||||||||  ||||||||||||||| | |    | ||||||||  ||| |||||||     
T  14737337 agaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggt-tgacaagtcctta 14737239  T
Q  190 tcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||  ||||||||| ||||||||||||||||||||||||||||| |||||    
T  14737238 tcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaag 14737189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 239
Target Start/End: Original strand, 6438843 - 6438960
Alignment:
Q  123 gaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaat 220  Q
    ||||||||||||||||||||  ||||||||||||||| | |    || || ||||  ||||||||||| |||  |||||||||  |||||||||||||||    
T  6438843 gaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggttcccaggtt-gaccagtccttatcagtgatacttaactagcaagtttctgaat 6438941  T
Q  221 cgtgtcacgatttcccaag 239  Q
    |||||||||||||||||||    
T  6438942 cgtgtcacgatttcccaag 6438960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 14742296 - 14742049
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctct------ctctnnnnnnnc-----tgcaca 92  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||| ||||||||| |||||| | ||||||||      ||||       |      |||||    
T  14742296 acaaagacacttaacccattggttccctcctttgttatccaag-ttctctctcaaagctcatacaagctctcttaaactctctttctccaaaaaagcaca 14742198  T
Q  93 agaacac-ttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttg 189  Q
    |||||||  || ||||||||||||| | || ||||||||| ||||||||||  ||||||||||||||| | |    | ||||||||  ||| |||||||     
T  14742197 agaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccttagatcgtgtcacgatctgcaacggacccaaggt-tgacaagtcctta 14742099  T
Q  190 tcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||  ||||||||| ||||||||||||||||||||||||||||| |||||    
T  14742098 tcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaag 14742049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 233
Target Start/End: Complemental strand, 26253843 - 26253698
Alignment:
Q  90 acaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtcct 187  Q
    |||||||||||||||||| ||||| |  | ||  |||||||| ||||||||||| ||||||||||||||  |||||| ||| ||| ||| ||||||||||    
T  26253843 acaagaacacttaaatacaagtctccaactgataaaatcgtgccacgatttccaaatcgtgtcacgattgatacgtacgtcacaaagtacgaccagtcct 26253744  T
Q  188 tgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    | ||  | | ||||||  |||||||||   ||||||||||||||||    
T  26253743 tatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgattt 26253698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 5343880 - 5343941
Alignment:
Q  178 gaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  5343880 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 5343941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 10077017 - 10076962
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  10077017 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 10076962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 30125185 - 30125142
Alignment:
Q  195 gatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 238  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 30125142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 5757303 - 5757249
Alignment:
Q  3 tacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  5757303 tacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 5757249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 2171884 - 2171980
Alignment:
Q  145 atcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||||||||  |||||| ||| ||||||| |||| |||||| ||  ||| |||||| ||||||||||   ||||||||||||||||||||||    
T  2171884 atcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcttggaaacttaacgagcaagttttacaatcgtgtcacgatttcccaag 2171980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 6097747 - 6097800
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatt 139  Q
    ||||||||||||||||||||||||||||||| | ||  ||||||||||||||||    
T  6097747 ctgcacaagaacacttaaatactagtcttcccctgataaaatcgtgtcacgatt 6097800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 31936846 - 31936903
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||||||   ||| ||||||||| |||||||||||||||||||||    
T  31936846 ctacaaagacactcaaccctaaagttacctcctttgcaatccaagtttctctctctaa 31936903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 6097787 - 6097877
Alignment:
Q  145 atcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    ||||||||||||||  | |||| ||||| ||||| ||||||||||| ||| ||| |||||| ||||||||||   ||||||||||||||||    
T  6097787 atcgtgtcacgattggtgcgtacgtccccaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattt 6097877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 31086300 - 31086245
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| || ||||||||||||||||||||||||||    
T  31086300 ctacaaagacactcaaccctaaagttaccccctttgtaatccaagtttctctctct 31086245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 2171844 - 2171897
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatt 139  Q
    ||||||||||||||||||||||||| ||||| | ||  ||||||||||||||||    
T  2171844 ctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatt 2171897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 5572069 - 5572012
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    |||||||||||| |||||||   ||| ||||| |||||||||||||||||||||||||    
T  5572069 ctacaaagacacccaaccctaaagttacctccattgtaatccaagtttctctctctaa 5572012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 31979783 - 31979840
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||||||   ||| ||||||||| | |||||||||||||||||||    
T  31979783 ctacaaagacactcaaccctaaagttacctcctttgcagtccaagtttctctctctaa 31979840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 18234354 - 18234409
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   | | ||||||||||||||||||||||| |||||    
T  18234354 ctacaaagacactcaaccctaaagctacctcctttgtaatccaagtttctttctct 18234409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 23896628 - 23896678
Alignment:
Q  7 aagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||| ||   ||| |||||||||||||||||||||||||||||    
T  23896628 aagacactcaactctaaagttacctcctttgtaatccaagtttctctctct 23896678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 24435796 - 24435743
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||   |||  |||||||||||||| |||||||||||||    
T  24435796 acaaagacactcaaccctaaagttatctcctttgtaatcctagtttctctctct 24435743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 27647685 - 27647596
Alignment:
Q  145 atcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttc 234  Q
    ||||||||||||| | ||||   ||||||  | ||||||||  | |||||||||||||| |||||||||||   ||||||||||||||||    
T  27647685 atcgtgtcacgatctgcgtaccacccaagaaacgaccagtcaatatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttc 27647596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 21272815 - 21272763
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    ||||||||||||||||||||   ||| || ||||||||||| |||||||||||    
T  21272815 ctacaaagacactcaaccctaaagttaccccctttgtaatcaaagtttctctc 21272763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 8e-73; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 2058245 - 2058482
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |       ||||||||||||||     
T  2058245 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtt-ctctctctaagctcttccaagctctct-tttcaaatctgcacaagaacaca 2058342  T
Q  101 -taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
     || ||||||| ||||||| || | ||||||| ||||||||||||||||||||||||||| ||||   ||||||||| ||||||||||| ||||||||||    
T  2058343 atatatactagccttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatac 2058442  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  2058443 ttaacgagcaagtttctgaatcgtgtcacgatttcccaag 2058482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 1533264 - 1533027
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||| |||||||||||    
T  1533264 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccctcaaat--ctgtacaagaacact 1533167  T
Q  101 -taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
     || ||||||| ||||||| || | ||||||| |||||||||||||||||||||||||||  |||||||||||||||  |||||||||| ||||||||||    
T  1533166 atatatactagccttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgtgtatgtcccaaggtataaccagtccttatcaaggatac 1533067  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| ||| |||||||  ||||||||||||||||||||||    
T  1533066 ttaacgagtaagtttcacaatcgtgtcacgatttcccaag 1533027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 21646280 - 21646519
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||||||||||||   ||| |||||||||||||| ||||||||||||||||||||||||||||||| ||        |||||||||||||||    
T  21646280 tctacaaagacactcaaccctagagtttcctcctttgtaatctaagtttctctctctaagctcttccaagctct-tccccaaaatctgcacaagaacact 21646378  T
Q  101 taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgattt--acgtatgtcccaaggtaagaccagtccttgtcaaggata 198  Q
    |||||||||| ||||||| ||  ||||||||||||||||||||||||||| ||||||||  ||||| ||||||||||| ||||||| ||| |||||||||    
T  21646379 taaatactagccttcctctgataaaatcgtgtcacgatttccagatcgtggcacgatttgaacgtacgtcccaaggtatgaccagttcttatcaaggata 21646478  T
Q  199 cttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||| ||||||||||   |||||||||||||||| |||||    
T  21646479 cttaacgagcaagtttgaaaatcgtgtcacgattttccaag 21646519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 18409037 - 18409275
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacactt 101  Q
    ||||||||||||||||||||   |||||||||||||||||| |||||||||||||||||||||||||||||||| ||       |||||| |||||||||    
T  18409037 ctacaaagacactcaaccctagagttccctcctttgtaatctaagtttctctctctaagctcttccaagctctc-ctccaaaatctgcacgagaacactt 18409135  T
Q  102 aaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
    ||||||||||||||| | ||  ||||||||||||||||||||  |||||||||||||  |||||| ||| ||||||| ||||||||||| ||| ||| ||    
T  18409136 aaatactagtcttccactgataaaatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgaccagtccttatcatggaaac 18409235  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||  |||||||||  |||||||||||||||||| ||||    
T  18409236 ttaacaagcaagtttgagaatcgtgtcacgatttctcaag 18409275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 18413913 - 18414151
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacactt 101  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||    
T  18413913 ctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc-ctccaaaatctgcacaagaacactt 18414011  T
Q  102 aaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
    |||||||||||||||   ||  |||| |||||||||||||||  |||||||||||||  |||||| ||| ||||||| ||||||||||| ||| ||| ||    
T  18414012 aaatactagtcttccaatgataaaattgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgaccagtccttatcatggaaac 18414111  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||  |||||||||  ||||||||| |||||||||||||    
T  18414112 ttaacaagcaagtttgagaatcgtgttacgatttcccaag 18414151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 87 - 239
Target Start/End: Complemental strand, 24789703 - 24789550
Alignment:
Q  87 tgcacaagaacacttaa-atactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtc 185  Q
    ||||||||||||||| | ||||||| ||||||| || | ||||||||||||||||||| ||||||||| ||||| ||||   ||||||||| ||||||||    
T  24789703 tgcacaagaacactttatatactagccttcctctgaagcaatcgtgtcacgatttccaaatcgtgtcaagatttgcgtacaacccaaggtatgaccagtc 24789604  T
Q  186 cttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||| |||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  24789603 cttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaag 24789550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 4873354 - 4873598
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnct--------gcacaaga 95  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||         ||        ||||||||    
T  4873354 acaaagacactcaacccattggttccctcctttgttatccaag-ttctctctctaagctcttccaagctctcttaagttcttcttcaaaaaagcacaaga 4873452  T
Q  96 acac-ttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtca 192  Q
    ||||  || ||||||||||||||| || ||||||||| ||||||||||  ||||||||||||||||| |    | ||||||| ||||| ||||||| |||    
T  4873453 acacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatttgcaacggacccaagg-aagacaagtccttatca 4873551  T
Q  193 aggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
      ||||||||| |||||||||||||||| ||||||||||||||||||    
T  4873552 gtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaag 4873598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 6592644 - 6592792
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  6592644 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 6592743  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||    
T  6592744 ccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattt 6592792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 6594860 - 6595008
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  6594860 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 6594959  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||    
T  6594960 ccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattt 6595008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 18389067 - 18389215
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  18389067 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 18389166  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  18389167 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 18389215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 18392503 - 18392651
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  18392503 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 18392602  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  18392603 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 18392651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 238
Target Start/End: Original strand, 1562310 - 1562463
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| |||||||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||| ||||| | |||||||    
T  1562310 ctgcacaagaacacataaatactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcacaaggaacgaccagt 1562409  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 238  Q
    |||| |||||||||||||| |||||||||||   ||||||||||||||| ||||    
T  1562410 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaa 1562463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 21640082 - 21640156
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc 75  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21640082 tctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc 21640156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 39731172 - 39731064
Alignment:
Q  126 atcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgt 223  Q
    |||||||||||||||||||||||||||||||||  |||||| ||||||||||| ||||||||||| ||| ||| |||||| ||||||||||   ||||||    
T  39731172 atcgtgtcacgatttccagatcgtgtcacgattggtacgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgt 39731073  T
Q  224 gtcacgatt 232  Q
    |||||||||    
T  39731072 gtcacgatt 39731064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 12397137 - 12397382
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc---------tctnnnnnnnctgcacaag 94  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||| | |||||||||         |||         |||||||    
T  12397137 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagctcatacaagctctcttaagttcttcttcaaaaaaggcacaag 12397235  T
Q  95 aacac-ttaaatactagtcttcctcagaggaaatcgtgtcacgattt--ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtc 191  Q
    |||||  || |||||||| |||||| || ||||||||| ||||||||  ||| ||||||||||||||| |    | |||||||| |||| ||||||| ||    
T  12397236 aacacaatatatactagtattcctctgaagaaatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggt-agacaagtccttatc 12397334  T
Q  192 aaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |  ||||||||| |||||||||||||||||||||||||||||||||||    
T  12397335 agtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 12397382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 24024186 - 24023942
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnn--ct--------gcacaa 93  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||| ||||||| |||||| | ||||||||||||         ||        ||||||    
T  24024186 acaaagacactcaacccattggttccctcctttgctatccaagtt-ctctctcaaagctcatacaagctctctcttatgtcttacttcaaaaaagcacaa 24024088  T
Q  94 gaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtc 191  Q
    ||||||| | ||||||||||||| | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  ||||||||||| ||    
T  24024087 gaacact-atatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagtccttatc 24023990  T
Q  192 aaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |  ||||||||| |||||||||||||||||||||||||||||||||||    
T  24023989 agtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 24023942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 238
Target Start/End: Original strand, 25767267 - 25767421
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    |||||||||||||||||||||||||||||||   ||  ||||||||||||||||||||  |||||||||||||  |||||| ||| ||||| | |||| |    
T  25767267 ctgcacaagaacacttaaatactagtcttccattgataaaatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggcacgacctg 25767366  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 238  Q
    ||||| ||   || |||||| ||||||||||   |||||||||||||||||||||    
T  25767367 tccttatcctagaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaa 25767421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 239
Target Start/End: Original strand, 12406598 - 12406734
Alignment:
Q  104 atactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatactt 201  Q
    ||||||||||||||| || ||||||||| ||||||||||  | ||||||||||||||| |    | ||||||||| ||| ||||||| |||  |||||||    
T  12406598 atactagtcttcctctgaagaaatcgtgccacgatttccccaaatcgtgtcacgatttgcaacggacccaaggta-gacaagtccttatcagtgatactt 12406696  T
Q  202 aatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    || |||||||||||||||||||||||||||||||||||    
T  12406697 aacgagcaagtttctgaatcgtgtcacgatttcccaag 12406734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 21640206 - 21640300
Alignment:
Q  145 atcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||||||||| |||  || |||||| | ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||    
T  21640206 atcgtgtcacgatttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 21640300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 20357245 - 20357151
Alignment:
Q  145 atcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||||| |||||||| ||| || ||||||||  |||| |||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  20357245 atcgtgccacgatttgcgtctgacccaaggtttgaccggtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaag 20357151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 32060671 - 32060759
Alignment:
Q  145 atcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    ||||||||||||||| |||  ||||||||| | ||||||||||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  32060671 atcgtgtcacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 32060759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 20357364 - 20357294
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc 75  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||    
T  20357364 acaaagacactcaaccctttggttccctcctttgttatccaag-ttctctcactaagctctaccaagctctc 20357294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 16880384 - 16880537
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | |||| ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  16880384 gcacaagaacactttaaatactagtcctgcccagaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 16880482  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  || ||||||  ||||||||||||||||||||||| ||||||||||    
T  16880483 ccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaag 16880537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 16885239 - 16885392
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | |||| ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  16885239 gcacaagaacactttaaatactagtcctgcccagaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggt-tgaccagt 16885337  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  || ||||||  ||||||||||||||||||||||| ||||||||||    
T  16885338 ccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaag 16885392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 24265953 - 24265800
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| |   | |||||||||||| ||||||||||  ||||||||||||||| | |    ||||| | ||  |||||||    
T  24265953 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagtt-gaccagt 24265855  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  24265854 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 24265800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 24261097 - 24260944
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcc-caaggtaagaccag 183  Q
    |||||||||||||| ||||||||||| |   | || ||||||||| ||||||||||  ||||||||||||||||| |    |||| |||| |  ||||||    
T  24261097 gcacaagaacactttaaatactagtcctgtcctgatgaaatcgtgccacgatttccctagatcgtgtcacgattttcaacggtcctcaagtt--gaccag 24261000  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  24260999 tccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 24260944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 39731231 - 39731158
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgattt 159  Q
    ||||||||||||||||||||||||| |||||   ||  ||||||||||||||||| ||||||||||||||||||    
T  39731231 ctgcacaagaacacttaaatactagccttccattgataaaatcgtgtcacgattttcagatcgtgtcacgattt 39731158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 46516131 - 46516070
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctc 63  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||    
T  46516131 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaagctc 46516070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 31109443 - 31109194
Alignment:
Q  4 acaaagacactcaaccctt-tggttccctcctttgtaatccaagtttctctctc-taagctcttccaagctctctctnnnnnnnct----------gcac 91  Q
    ||||||||||||||||| | |||||||||||||||  |||||||||| |||||| ||||||| | ||||||||||||        |          ||||    
T  31109443 acaaagacactcaacccatatggttccctcctttgctatccaagtttttctctcttaagctcatacaagctctctcttaagtttatcttcaaaaaagcac 31109344  T
Q  92 aagaacac-ttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtcctt 188  Q
    ||||||||  || ||||||||||||||| || ||||||||| ||||||||||  ||||||||||||||| | |    | |||||||  |||| |||||||    
T  31109343 aagaacacaatatatactagtcttcctctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggccccaagg-cagacaagtcctt 31109245  T
Q  189 gtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
     |||   ||||||||  ||||||||||||||||||||||||||||||||||    
T  31109244 atcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 31109194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 20343717 - 20343625
Alignment:
Q  145 atcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    ||||||||||||| | ||||   ||||||  | ||||||||||| |||||||||||||| |||||||||||   |||||||||||||||||||    
T  20343717 atcgtgtcacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca 20343625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 237
Target Start/End: Original strand, 43504523 - 43504595
Alignment:
Q  165 tgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||||||||||| ||||||||||| ||| ||| |||||| ||||||||||   ||||||||||||||||||||    
T  43504523 tgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccca 43504595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 2479611 - 2479662
Alignment:
Q  6 aaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  2479611 aaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 2479662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 23402839 - 23402784
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  23402839 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 23402784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 21811923 - 21811862
Alignment:
Q  178 gaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||||| |||  |||||||||  |||||||||||| |||||||||||||||||||||    
T  21811923 gaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaag 21811862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 48408658 - 48408605
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatt 139  Q
    ||||||||||||||||||||||||||||||| | ||  ||||||||||||||||    
T  48408658 ctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatt 48408605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 2580662 - 2580717
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||||   ||| ||||||||| |||||||||||||||||||||    
T  2580662 acaaagacactcaaccctaaagttacctcctttgcaatccaagtttctctctctaa 2580717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 20284360 - 20284415
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||| ||||||||||||||||||||    
T  20284360 ctacaaagacactcaaccctaaagttacctcctttataatccaagtttctctctct 20284415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 44847951 - 44847896
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||| ||||||||||||||||||||    
T  44847951 ctacaaagacactcaaccctaaagttacctcctttataatccaagtttctctctct 44847896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 47263937 - 47263992
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||| ||||||||||||||||||||    
T  47263937 ctacaaagacactcaaccctaaagttacctcctttataatccaagtttctctctct 47263992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 49091961 - 49092015
Alignment:
Q  3 tacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||| |   ||| |||||||||||||||||||||||||||||    
T  49091961 tacaaagacactcaaccttaaagttacctcctttgtaatccaagtttctctctct 49092015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 2647523 - 2647466
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||||||   |||  |||||||||| |||||||||||||||||||    
T  2647523 ctacaaagacactcaaccctaaagttatctcctttgtagtccaagtttctctctctaa 2647466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 3047525 - 3047581
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaat-ccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| ||||||||||||| ||||||||||||||||    
T  3047525 ctacaaagacactcaaccctaaagttacctcctttgtaatcccaagtttctctctct 3047581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 21989179 - 21989231
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    |||||||||||||||| |||   ||| ||||||||||||||||||||||||||    
T  21989179 ctacaaagacactcaaacctaaagttacctcctttgtaatccaagtttctctc 21989231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 79659 - 79714
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||||| | |   ||| |||||||||||||||||||||||||||||    
T  79659 ctacaaagacactcaatcttaaagttacctcctttgtaatccaagtttctctctct 79714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 33332276 - 33332221
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||| ||||||||||||   ||| ||||||||||||||||||||||| |||||    
T  33332276 ctacaaaaacactcaaccctaaagttacctcctttgtaatccaagtttctatctct 33332221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 48408618 - 48408522
Alignment:
Q  145 atcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||||||||  |||||| ||  ||||||| ||||||||||| ||   || |||||| ||||||||||   ||||||||||||||||| ||||    
T  48408618 atcgtgtcacgattggtacgtacgttacaaggtacgaccagtccttatcctagaaacttaacgagcaagtttgcaaatcgtgtcacgatttctcaag 48408522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 4796494 - 4796443
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    |||||||||||||||||| |   ||| ||||||||||||||||||||||||||    
T  4796494 ctacaaagacactcaacc-taaagttacctcctttgtaatccaagtttctctc 4796443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 5817096 - 5817036
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatcc-aagtttctctctctaagc 61  Q
    |||||||||||||||||| |   ||| ||||||||||| ||| ||||||||||||||||||    
T  5817096 ctacaaagacactcaaccataaagttacctcctttgtattcccaagtttctctctctaagc 5817036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 20343756 - 20343705
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgat 138  Q
    |||||||||||||||| | |||||||||||||| |  ||||||||||||||||    
T  20343756 ctgcacaagaacacttta-tactagtcttcctctgttgaaatcgtgtcacgat 20343705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Original strand, 32060631 - 32060663
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctc 118  Q
    |||||||||||||||||| ||||||||||||||    
T  32060631 ctgcacaagaacacttaagtactagtcttcctc 32060663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 4759894 - 4759657
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||  |         ||||||||||||     
T  4759894 tctacaaagacactcaaccctttggttacctcctttgcaatccaagattctctctctaagctcttccaagctctccttcaaacaa--gcacaagaacaca 4759797  T
Q  101 -taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
     || ||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||  || |||||||| ||||||||||| ||||||||||    
T  4759796 atatatactagtcttcctctgaagaaatcgtgtcacgatttccagatcgtgtcacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatac 4759697  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  4759696 ttaacgagcaagtttctaaatcgtgtcacgatttcccaag 4759657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 1261777 - 1261538
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||  |         |||||||||||||    
T  1261777 tctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacact 1261680  T
Q  101 t-aaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgattt--acgtatgtcccaaggtaagaccagtccttgtcaaggat 197  Q
    | ||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||| ||||||||    
T  1261679 ttaaatactagccttcctctgataaaatcgtgtcacgatttccagatcgtgtcacgatttgaacgtatgtcccaaggtatgaccagtccttatcaaggat 1261580  T
Q  198 acttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||||| ||||||||||   ||||||||||||||||||||||    
T  1261579 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaag 1261538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 36979653 - 36979891
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctg-cacaagaacac 99  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||           |||||||||||    
T  36979653 tctacaaagacactcaaccctttggttcccttctttgtaatccaagtttctctctctaagctcttccaagctct-tctccaaaaaagaacacaagaacac 36979751  T
Q  100 ttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
    ||||||||||| ||||||| || | ||||||| ||||||||||||||||||||||||||| ||||   ||||||||| ||||||||||| |||  |||||    
T  36979752 ttaaatactagccttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtacaacccaaggtatgaccagtccttatcagagatac 36979851  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  36979852 ttaacgagcaagtttctgaatcgtgtcacgattttccaag 36979891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 18852984 - 18852750
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact-ta 102  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |         ||||||||||||  ||    
T  18852984 acaaagacactcaaccctttggttccctcctttgttatccaagtttctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacacaata 18852887  T
Q  103 aatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatactta 202  Q
     ||||||||||||||| || | ||||||| ||||||||||| ||||||||||||| | ||| || ||||||||| ||||||||||| |||  ||||||||    
T  18852886 tatactagtcttcctctgaagcaatcgtgccacgatttccaaatcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttatcagtgatactta 18852787  T
Q  203 atgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    | |||||||||||||||||||||||||||||||||||    
T  18852786 acgagcaagtttctgaatcgtgtcacgatttcccaag 18852750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 30655926 - 30656159
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact-ta 102  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||  |          |||||||||||  ||    
T  30655926 acaaagacactcaaccctttggttccctcctttgttatccaagtt-ctctctttaagctcttccaagctctccttcaaaaaaa--cacaagaacacaata 30656022  T
Q  103 aatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatactta 202  Q
     ||||||||||||||| || | ||||||| ||||||||||||||||||||||||||| ||| || ||||||||  ||||||||||| |||||||||||||    
T  30656023 tatactagtcttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatactta 30656122  T
Q  203 atgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    | |||||||||||||||||||||||||||||||||||    
T  30656123 acgagcaagtttctgaatcgtgtcacgatttcccaag 30656159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 18870378 - 18870144
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact-ta 102  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  |         ||||||||||||  ||    
T  18870378 acaaagacactcaaccctttggttccctcctttgttatccatgtttctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacacaata 18870281  T
Q  103 aatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatactta 202  Q
     ||||||||||| ||| || | ||||||| |||||||| || ||||||||||||| | ||| || ||||||||| ||||||||||| | |  ||||||||    
T  18870280 tatactagtctttctctgaagcaatcgtgccacgattttcaaatcgtgtcacgatctgcgtctgacccaaggtatgaccagtccttattagtgatactta 18870181  T
Q  203 atgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    | |||||||||||||||||||||||||||||||||||    
T  18870180 acgagcaagtttctgaatcgtgtcacgatttcccaag 18870144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 10688960 - 10688722
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacac- 99  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| |       ||||||||||||||     
T  10688960 tctacaaagacactcaaccctttggttccctcctttgttatccaagtttctctttcttagctcttccaagctctcttt--caaaactgcacaagaacaca 10688863  T
Q  100 ttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggat 197  Q
     || ||||||||||||||| || ||||| ||| ||||||||||    ||||||||||||||| | | || ||||||||  ||| ||||||| | |  |||    
T  10688862 atatatactagtcttcctctgaagaaattgtgccacgatttcccacaatcgtgtcacgatttgcatctgacccaaggt-tgacaagtccttattagtgat 10688764  T
Q  198 acttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  10688763 acttaacgagcaagtttctgaatcgtgtcacgatttcccaag 10688722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 7289785 - 7289551
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact-ta 102  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| |         ||||||||||||  ||    
T  7289785 acaaagacactcaacccattggttccctcctttgctatccaagtt-ctctctctaagctcttccaagctctctttcaaaaaa--gcacaagaacacaata 7289689  T
Q  103 aatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatact 200  Q
     ||||||||||||||| || ||||||||| ||||||||||  ||||||||||||||||| | | ||  |||||||| ||| ||||||| ||| |||||||    
T  7289688 tatactagtcttcctctgaagaaatcgtgccacgatttcccaagatcgtgtcacgatttgcatctgatccaaggta-gacaagtccttatcagggatact 7289590  T
Q  201 taatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||| ||||||||||||||||||||||||||||| |||||    
T  7289589 taacgagcaagtttctgaatcgtgtcacgattttccaag 7289551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 6311578 - 6311812
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacac-tta 102  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||| ||||||||||||||||||||||||||         ||||||||||||  ||    
T  6311578 acaaagacactcaaccctttggttccctcctttgctatccaag-ttctatctctaagctcttccaagctctctctcaaaaaa--gcacaagaacacaata 6311674  T
Q  103 aatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatact 200  Q
     ||||||||||||||| || ||||| ||| ||||||||||    ||||||||||||||| | | || ||||||||  ||| ||||||| | |  ||||||    
T  6311675 tatactagtcttcctctgaagaaattgtgccacgatttcccacaatcgtgtcacgatttgcatctgacccaaggt-tgacaagtccttattagtgatact 6311773  T
Q  201 taatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  6311774 taacgagcaagtttctgaatcgtgtcacgatttcccaag 6311812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 233
Target Start/End: Original strand, 42575631 - 42575779
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| |||||||||    
T  42575631 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgatttgcccaatcgtgtcacgatttgcgtccgtcccaaggaaagaccagt 42575730  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  42575731 ccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 42575779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 26288164 - 26288393
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||| ||||||||   |||||| |||||||||||||||||||||||||||||||||||           |       |||||||||||||||    
T  26288164 tctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctctaagctcttc-----------tccaaaatctgcacaagaacact 26288252  T
Q  101 taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggata 198  Q
    |||||||||| ||||| | ||  ||||||||||||||||||||| ||||| ||| |||   ||||| ||| ||||||| ||||||||||| ||| ||| |    
T  26288253 taaatactagccttccactgataaaatcgtgtcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtacgaccagtccttatcatggaaa 26288352  T
Q  199 cttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||| ||||||||||   ||| ||||||||||||||||||    
T  26288353 cttaacgagcaagtttgaaaattgtgtcacgatttcccaag 26288393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 26301421 - 26301650
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||| ||||||||   |||||| |||||||||||||||||||||||||||||||||||           |       |||||||||||||||    
T  26301421 tctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctctaagctcttc-----------tccaaaatctgcacaagaacact 26301509  T
Q  101 taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggata 198  Q
    |||||||||| ||||| | ||  ||||||||||||||||||||| ||||| ||| |||   ||||| ||| ||||||| ||||||||||| ||| ||| |    
T  26301510 taaatactagccttccactgataaaatcgtgtcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtacgaccagtccttatcatggaaa 26301609  T
Q  199 cttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||| ||||||||||   ||| ||||||||||||||||||    
T  26301610 cttaacgagcaagtttgaaaattgtgtcacgatttcccaag 26301650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 26313415 - 26313644
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||| ||||||||   |||||| |||||||||||||||||||||||||||||||||||           |       |||||||||||||||    
T  26313415 tctacaaagacattcaaccctagagttcccccctttgtaatccaagtttctctctctaagctcttc-----------tccaaaatctgcacaagaacact 26313503  T
Q  101 taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggata 198  Q
    |||||||||| ||||| | ||  ||||||||||||||||||||| ||||| ||| |||   ||||| ||| ||||||| ||||||||||| ||| ||| |    
T  26313504 taaatactagccttccactgataaaatcgtgtcacgatttccaggtcgtgacactattggaacgtacgtcacaaggtacgaccagtccttatcatggaaa 26313603  T
Q  199 cttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||| ||||||||||   ||| ||||||||||||||||||    
T  26313604 cttaacgagcaagtttgaaaattgtgtcacgatttcccaag 26313644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 33037628 - 33037554
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc 75  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33037628 tctacgaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc 33037554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 33037504 - 33037410
Alignment:
Q  145 atcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||||||||| |||  || |||||| | ||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||    
T  33037504 atcgtgtcacgatttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 33037410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 238
Target Start/End: Complemental strand, 3439363 - 3439211
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||| | |||||||||||||| |  |||||||||||||||||| ||  |||||| |||||| | ||||   ||||||  | |||||||    
T  3439363 ctgcacaagaacacttta-tactagtcttcctctgttgaaatcgtgtcacgattttcccaatcgtgccacgatatgcgtaccacccaagaaacgaccagt 3439265  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 238  Q
    |||| |||||||||||||| |||||||||||   ||||||||||||||||||||    
T  3439264 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa 3439211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 237
Target Start/End: Complemental strand, 25689817 - 25689666
Alignment:
Q  87 tgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccaga-tcgtgtcacgatttacgtatgtcccaaggtaagaccagtc 185  Q
    |||||||||||||||||||||||| ||||||| |  | |||||||||||||||| |  | ||||||||||||||  |||    |||||| | ||||||||    
T  25689817 tgcacaagaacacttaaatactagccttcctctgttgcaatcgtgtcacgattttctcaatcgtgtcacgatttgtgtacaaaccaaggaacgaccagtc 25689718  T
Q  186 cttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    ||| |||||||||||||| |||||||||||   ||||||| |||||||||||    
T  25689717 cttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttccca 25689666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 10684015 - 10683862
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| |   | |||||||||||| ||||||||||  ||||||||||||||| | |    ||||| | ||  |||||||    
T  10684015 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagtt-gaccagt 10683917  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  10683916 ccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 10683862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 35745702 - 35745855
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  35745702 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 35745800  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  35745801 ccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 35745855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 31043185 - 31043112
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgattt 159  Q
    ||||||||||||||||||||||||||||||| | ||  ||||||||||||||||||||  ||||||||||||||    
T  31043185 ctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatttccaagtcgtgtcacgattt 31043112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 15290361 - 15290273
Alignment:
Q  145 atcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    ||||||||||||||| |||  ||||||||| |  |||||||||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  15290361 atcgtgtcacgatttgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 15290273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 15470730 - 15470642
Alignment:
Q  145 atcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    ||||||||||||||| |||  ||||||||| |  |||||||||| |||||||||||||| ||||||||||||  |||||||||||||||    
T  15470730 atcgtgtcacgatttgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattt 15470642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 238
Target Start/End: Complemental strand, 2627597 - 2627443
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||| | |||   ||  ||||||||||||||||| ||||||||||||| | |  | |||| ||| ||||  | |||||     
T  2627597 ctgcacaagaacacttaaatactagccctccaacgataaaatcgtgtcacgatttacagatcgtgtcacaaatggtgcgtacgtcacaagaaacgaccaa 2627498  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 238  Q
    ||||| ||| ||| |||||| ||||||||||   |||||||||||||||||||||    
T  2627497 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa 2627443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 25327940 - 25327787
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||||||| | || ||||||||| ||||||||||  ||||||||||||||  | |    | ||||||||  ||| |||    
T  25327940 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgagctgcaacggacccaaggtt-gacaagt 25327842  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  25327841 ccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 25327787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 39784601 - 39784448
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||||||| | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  39784601 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 39784503  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  | ||||||||||||||||||||||||||||||||    
T  39784502 ccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaag 39784448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 31043125 - 31043017
Alignment:
Q  127 tcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtg 224  Q
    |||||||||||||||||  |||||||||||||  |||||| ||| ||||||| |||| |||||| ||  ||| |||||| ||||||||||  ||||||||    
T  31043125 tcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgagaatcgtg 31043026  T
Q  225 tcacgattt 233  Q
    |||||||||    
T  31043025 tcacgattt 31043017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7412610 - 7412666
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  7412610 tctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 7412666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23799403 - 23799347
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  23799403 tctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 23799347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 5702306 - 5702251
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  5702306 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 5702251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 19175580 - 19175528
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    ||||||||||||||||||||   ||| ||||||||||||||||||||||||||    
T  19175580 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctc 19175528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 4456299 - 4456354
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||| ||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  4456299 ctacagagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 4456354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 4696434 - 4696379
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   |||  ||||||||||||||||||||||||||||    
T  4696434 ctacaaagacactcaaccctaaagttatctcctttgtaatccaagtttctctctct 4696379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 19752220 - 19752163
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||||||   ||| |||||||||  ||||||||||||||||||||    
T  19752220 ctacaaagacactcaaccctaaagttacctcctttgcgatccaagtttctctctctaa 19752163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Complemental strand, 15290401 - 15290369
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctc 118  Q
    |||||||||||||||||| ||||||||||||||    
T  15290401 ctgcacaagaacacttaagtactagtcttcctc 15290369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 118
Target Start/End: Complemental strand, 15470770 - 15470738
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctc 118  Q
    |||||||||||||||||| ||||||||||||||    
T  15470770 ctgcacaagaacacttaagtactagtcttcctc 15470738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 28307833 - 28307889
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatcc-aagtttctctctct 57  Q
    ||||||||||||||||| ||   ||| ||||||||||||||| ||||||||||||||    
T  28307833 ctacaaagacactcaactctaaagttacctcctttgtaatcctaagtttctctctct 28307889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 5e-68; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 35387936 - 35388169
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||||||| |       |||||||||||||||    
T  35387936 tctacaaagacactcaaccctagagttccctcctttgtaatccaagtttttctctctaagctcttccaagctctct-tccaaaatctgcacaagaacact 35388034  T
Q  101 taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgattt--acgtatgtcccaaggtaagaccagtccttgtcaaggata 198  Q
    |||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| ||||||||||| |||||||||    
T  35388035 taaatactagccttcctctgataaaatcgtgtcacgatttccagatcgtgtcacgatttgaacgtacgtcccaaggtatgaccagtccttatcaaggata 35388134  T
Q  199 cttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    ||||| ||||||||||   ||||||||||| ||||    
T  35388135 cttaacgagcaagtttgaaaatcgtgtcacaattt 35388169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 24136123 - 24136360
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctct-ctctnnnnnnnctgcacaagaacac 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||         |||||||||||||    
T  24136123 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctcttagctcttccaagctctactccaaaaa---tgcacaagaacac 24136219  T
Q  100 ttaa-atactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggata 198  Q
    || | |||||||  |||||| ||   ||||||| ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||| |||||||||    
T  24136220 tttatatactagctttcctctgatacaatcgtgccacgatttccagatcgtgtcacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggata 24136319  T
Q  199 cttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||| ||||||||||   ||||||||||||||||||||||    
T  24136320 cttaacgagcaagtttgaaaatcgtgtcacgatttcccaag 24136360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 38219673 - 38219906
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacactt 101  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| ||||||| |||       ||||||||||||||      
T  38219673 ctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttcaaagctct-tcttcaaaatctgcacaagaacac-- 38219769  T
Q  102 aaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
       |||||| ||||||| ||  |||| ||||||||||||||| ||||||||||||||   ||||| ||| ||||||| ||||||||||| ||| ||| ||    
T  38219770 ---tactagccttcctctgataaaattgtgtcacgatttccaaatcgtgtcacgattggaacgtacgtcacaaggtacgaccagtccttatcatggaaac 38219866  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||  |||||||||   ||||||||||| ||||||||||    
T  38219867 ttaacaagcaagtttgaaaatcgtgtcacaatttcccaag 38219906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 31180493 - 31180726
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact-ta 102  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| | | ||         ||||||||||||  ||    
T  31180493 acaaagacactcaaccctttggttccctcctttgttatccaagtt-ctctctctaagctcttccaagccc-cgcttcaaaaa--gcacaagaacacaata 31180588  T
Q  103 aatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatact 200  Q
     ||||||||||||||| || | ||||||| ||||||||||  ||||| ||||||||||| ||| || ||||||||  ||||||||||| |||  ||||||    
T  31180589 tatactagtcttcctctgaagcaatcgtgccacgatttcccaagatcatgtcacgatttgcgtctgacccaaggtt-gaccagtccttatcagtgatact 31180687  T
Q  201 taatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||| ||| |||| ||||||||||||||||||||||||||    
T  31180688 taacgagaaagtctctgaatcgtgtcacgatttcccaag 31180726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 25077983 - 25077831
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  25077983 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 25077884  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25077883 ccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttccca 25077831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 25135952 - 25135800
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  25135952 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 25135853  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25135852 ccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttccca 25135800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 43592597 - 43592749
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtc 185  Q
    ||||||||||||  || ||||||| ||||||| || | |||||||||||||||||| | ||||||||||||||| ||| || ||||||||| ||||||||    
T  43592597 gcacaagaacacaatatatactagccttcctccgaagcaatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtc 43592695  T
Q  186 cttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||| ||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  43592696 cttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 43592749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 104 - 239
Target Start/End: Original strand, 43599059 - 43599194
Alignment:
Q  104 atactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatactta 202  Q
    ||||||| ||||||| || | |||||||||||||||||| | ||||||||||||||| ||| || ||||||||| ||||||||||| ||| |||||||||    
T  43599059 atactagccttcctctgaagcaatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatactta 43599157  T
Q  203 atgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    | |||||||||||||||||||||||||||||||||||    
T  43599158 acgagcaagtttctgaatcgtgtcacgatttcccaag 43599194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 104 - 239
Target Start/End: Original strand, 43604551 - 43604686
Alignment:
Q  104 atactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatactta 202  Q
    ||||||| ||||||| || | |||||||||||||||||| | ||||||||||||||| ||| || ||||||||| ||||||||||| ||| |||||||||    
T  43604551 atactagccttcctctgaagcaatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatactta 43604649  T
Q  203 atgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    | |||||||||||||||||||||||||||||||||||    
T  43604650 acgagcaagtttctgaatcgtgtcacgatttcccaag 43604686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 104 - 239
Target Start/End: Original strand, 43610043 - 43610178
Alignment:
Q  104 atactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatactta 202  Q
    ||||||| ||||||| || | |||||||||||||||||| | ||||||||||||||| ||| || ||||||||| ||||||||||| ||| |||||||||    
T  43610043 atactagccttcctctgaagcaatcgtgtcacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtccttatcagggatactta 43610141  T
Q  203 atgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    | |||||||||||||||||||||||||||||||||||    
T  43610142 acgagcaagtttctgaatcgtgtcacgatttcccaag 43610178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 27445291 - 27445443
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtc 185  Q
    ||||||||||||  || ||||||| ||||||| || | ||||||| |||||||||| | ||||||||||||||| ||| || ||||||||| ||||||||    
T  27445291 gcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtc 27445389  T
Q  186 cttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||| ||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  27445390 cttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 27445443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 27450134 - 27450286
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc-agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtc 185  Q
    ||||||||||||  || ||||||| ||||||| || | ||||||| |||||||||| | ||||||||||||||| ||| || ||||||||| ||||||||    
T  27450134 gcacaagaacacaatatatactagccttcctctgaagcaatcgtgccacgatttcccaaatcgtgtcacgatttgcgtctgacccaaggta-gaccagtc 27450232  T
Q  186 cttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||| ||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  27450233 cttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 27450286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 16544271 - 16544123
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  16544271 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 16544172  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  16544171 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 16544123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 16546493 - 16546345
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  16546493 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 16546394  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  16546393 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 16546345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 87 - 233
Target Start/End: Original strand, 29751467 - 29751615
Alignment:
Q  87 tgcacaagaacacttaa-atactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||||| | ||||||| |||||||  | | |||||||||||||||| ||| ||||||||||||||| ||||   ||||||||| |||||||    
T  29751467 tgcacaagaacactttatatactagccttcctctaaagcaatcgtgtcacgattttccaaatcgtgtcacgatttgcgtacaacccaaggtatgaccagt 29751566  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||  ||||||||||||||||    
T  29751567 ccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgattt 29751615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 40379955 - 40379807
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  40379955 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 40379856  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  40379855 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 40379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 40382166 - 40382018
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  40382166 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 40382067  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  40382066 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 40382018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 26177745 - 26177592
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    |||| |||||||||||||||||||| | ||| | ||  ||||||||||||||||||||| |||||||||||||  | |||  ||||||||||| ||||||    
T  26177745 ctgcgcaagaacacttaaatactagccctccactgataaaatcgtgtcacgatttccaggtcgtgtcacgattggtgcgtccgtcccaaggtacgaccag 26177646  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    ||||| ||| ||| |||||| ||||||||||   ||||||||||||||||||||    
T  26177645 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccca 26177592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 1456914 - 1456761
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || |||||||||||||||  | ||||||||| ||||||||||  ||| ||||||||||||| | | || ||||||||| ||| |||    
T  1456914 gcacaagaacacaatatatactagtcttcctctaaagaaatcgtgccacgatttcccaagaccgtgtcacgatttgcatctgacccaaggta-gacaagt 1456816  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| ||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  1456815 ccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaag 1456761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 18441954 - 18442107
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||| | ||| | ||  ||||||||||||||||||||| |||||||||||||  | |||  ||||||||  | ||||||    
T  18441954 ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatttccaggtcgtgtcacgattggtgcgttcgtcccaagaaacgaccag 18442053  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    ||||| ||| ||| |||||| ||||||||||   ||||||||||||||||||||    
T  18442054 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccca 18442107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 10593120 - 10592972
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||||||| ||||||||||||||| |  |||||||||||||||||| ||| ||||||||||||| | ||||   || |||  | |||||||    
T  10593120 ctgcacaagaacacttacatactagtcttcctctgttgaaatcgtgtcacgatttcccaaatcgtgtcacgatctgcgtaccaccgaagaaacgaccagt 10593021  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| ||| |||||||||| |||||||||||   |||||||||||||||    
T  10593020 ccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattt 10592972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 26170636 - 26170483
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||| | ||| | ||  ||||||||||||||| ||||| |||||||||||||  | |||  ||||||||||| ||||||    
T  26170636 ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgatatccaggtcgtgtcacgattggtgcgtccgtcccaaggtacgaccag 26170537  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    ||||| ||| ||| |||||| ||||||||||   |||  |||||||||||||||    
T  26170536 tccttatcatggaaacttaacgagcaagtttgcaaattatgtcacgatttccca 26170483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 15045004 - 15045157
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||||||| | || ||||||||| ||||||||||  ||||||||||||||| | |    | ||| ||||  |||||||    
T  15045004 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggaccccaggtt-gaccagt 15045102  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||||||||||||||||||||||||||||||||||||||    
T  15045103 ccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 15045157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 33768495 - 33768648
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  33768495 gcacaagaacactttaaatactagtcatgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 33768593  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  33768594 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 33768648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 33791627 - 33791780
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  33791627 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 33791725  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  33791726 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 33791780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 1457021 - 1456952
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctct 74  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  1457021 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagctcttccaagctct 1456952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 9789530 - 9789683
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||| | ||| | ||  ||||||||||||||||| ||| ||||||||||| |  | |||  ||| ||||  | ||||||    
T  9789530 ctgcacaagaacacttaaatactagccctccactgataaaatcgtgtcacgattttcaggtcgtgtcacgaatggtgcgttcgtcgcaagaaacgaccag 9789629  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    ||||| ||| ||| |||||| ||||||||||   ||||||||||||||||||||    
T  9789630 tccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttccca 9789683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 2785686 - 2785839
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| | | | || ||||||||| ||||||||||  ||||||||||||||| | |     |||| ||||  |||||||    
T  2785686 gcacaagaacactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacgctccccaggtt-gaccagt 2785784  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  2785785 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 2785839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 15464805 - 15464952
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacactt 101  Q
    ||||||||||||||||||||   ||| ||| |||||||||||||||||||||||||         ||||||||| ||       ||||||||||||||||    
T  15464805 ctacaaagacactcaaccctaaagtttccttctttgtaatccaagtttctctctctt--------caagctctc-ctccaaaatctgcacaagaacactt 15464895  T
Q  102 aaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt 158  Q
    ||||||||||||||  | ||  |||||||| ||||||||||| ||||||||||||||    
T  15464896 aaatactagtcttctactgataaaatcgtgccacgatttccaaatcgtgtcacgatt 15464952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 27445196 - 27445267
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctct 76  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||| | ||||||||||    
T  27445196 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagctcattcaagctctct 27445267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 27450040 - 27450111
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctct 76  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||| | ||||||||||    
T  27450040 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagctcattcaagctctct 27450111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 30631764 - 30631824
Alignment:
Q  178 gaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 238  Q
    ||||||||||| |||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  30631764 gaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa 30631824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 43592505 - 43592576
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctct 76  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||| | ||||||||||    
T  43592505 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagctcattcaagctctct 43592576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 43598950 - 43599021
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctct 76  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||| | ||||||||||    
T  43598950 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagctcattcaagctctct 43599021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 43604442 - 43604513
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctct 76  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||| | ||||||||||    
T  43604442 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagctcattcaagctctct 43604513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 43609934 - 43610005
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctct 76  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||| | ||||||||||    
T  43609934 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagctcattcaagctctct 43610005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 24553353 - 24553296
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||    
T  24553353 ctacaaagacactcaacccttaagttacctcctttgtaatccaagtttctttctctaa 24553296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 29402717 - 29402673
Alignment:
Q  195 gatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  29402717 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 29402673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 22536668 - 22536727
Alignment:
Q  178 gaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    ||||||||||| |||||||||||||| |||||||||||   |||||||||||||||||||    
T  22536668 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca 22536727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 31401623 - 31401470
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| |||||| |||| | | | || ||||||||||||||||| ||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  31401623 gcacaagaacactttaaatacaagtcctgccctgaagaaatcgtgtcacgattaccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 31401525  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  || ||||||  |||||||||||||||| |||||||||||||||||    
T  31401524 ccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaag 31401470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 28832528 - 28832585
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||| ||   ||| |||||||||||||||||||||||||||||||    
T  28832528 ctacaaagacactcaactctaaagttacctcctttgtaatccaagtttctctctctaa 28832585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 29720163 - 29720091
Alignment:
Q  166 gtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagttt-ctgaatcgtgtcacgatttccca 237  Q
    ||||||||||| ||||||||||| ||| ||| |||||| |||||||||| |  ||||||||||||||||||||    
T  29720163 gtcccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttccca 29720091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 30631686 - 30631730
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtt 48  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||    
T  30631686 acaaagacactcaacccattggttccctcctttgttatccaagtt 30631730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 37561130 - 37561070
Alignment:
Q  179 accagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||||||||| |||  |||||||||  |||||||||||| |||||||||||||||||||||    
T  37561130 accagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaag 37561070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 9353158 - 9353103
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||| ||||||   ||| |||||||||||||||||||||||||||||    
T  9353158 ctacaaagacacttaaccctaaagttacctcctttgtaatccaagtttctctctct 9353103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 14520501 - 14520556
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||| ||||||||||||||    
T  14520501 ctacaaagacactcaaccctaaagttacctcctttgtaatctaagtttctctctct 14520556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 31396766 - 31396613
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| |||||| |||| | | | || ||||||||||||||||| ||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  31396766 gcacaagaacactttaaatacaagtcctgccctgaagaaatcgtgtcacgattaccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagt 31396668  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  || ||||||  | ||||| ||||||||||||||||||||||||||    
T  31396667 ccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaag 31396613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 36932100 - 36932002
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagacca 182  Q
    |||||||||||||||||||||| |||||||  | ||  |||||||| |||||||| || || |||||||||||  |||||| | ||||||||| |||||    
T  36932100 ctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacgattttcaaattgtgtcacgattgatacgtacgacccaaggtacgacca 36932002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 36932170 - 36932119
Alignment:
Q  6 aaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||   ||||||||||||| |||||||||||||||||||    
T  36932170 aaagacactcaaccctaaagttccctcctttgcaatccaagtttctctctct 36932119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 15044912 - 15044984
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctct-ctaagctcttccaagctctct 76  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||| | |||||| | ||||||||||    
T  15044912 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctacaaagctcatacaagctctct 15044984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 28807260 - 28807199
Alignment:
Q  178 gaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||||| |||  |||||||||  | |||||||||| |||||||||||||||||||||    
T  28807260 gaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaag 28807199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 31300421 - 31300364
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    |||||||||||||||||| |   ||| ||||||||| |||||||||||||||||||||    
T  31300421 ctacaaagacactcaaccttaaagttacctcctttgcaatccaagtttctctctctaa 31300364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 9353085 - 9353013
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt 158  Q
    |||||||||||||||||||||| |||||||  | ||  |||||||| |||| |||||| |||||| |||||||    
T  9353085 ctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacgttttccaaatcgtgccacgatt 9353013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 11916798 - 11916746
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    ||||||||| ||||||||||   ||| ||||||||||||||||||||||||||    
T  11916798 ctacaaagaaactcaaccctaaagttacctcctttgtaatccaagtttctctc 11916746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 12083999 - 12083951
Alignment:
Q  6 aaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    ||||||||||||||||   ||| ||||||||||||||||||||||||||    
T  12083999 aaagacactcaaccctaaagttacctcctttgtaatccaagtttctctc 12083951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 11181658 - 11181603
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||||||| |   ||| |||||||||||| ||||||||||||||||    
T  11181658 ctacaaagacactcaaccataaagttacctcctttgtaaaccaagtttctctctct 11181603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 16407843 - 16407772
Alignment:
Q  161 cgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatt 232  Q
    |||| ||||||||||| |||| |||||| ||| ||| |||||| ||||||||||   |||||||||||||||    
T  16407843 cgtacgtcccaaggtacgaccggtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatt 16407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 16409279 - 16409208
Alignment:
Q  161 cgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatt 232  Q
    |||| ||||||| ||| ||||||||||| ||| ||| |||||| ||||||||||   |||||||||||||||    
T  16409279 cgtacgtcccaatgtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatt 16409208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 17003785 - 17003730
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||| ||||||||   |||  ||||||||||||||||||||||||||||    
T  17003785 ctacaaagacattcaaccctaaagttatctcctttgtaatccaagtttctctctct 17003730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 42127196 - 42127139
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||| |||||||| |   ||| |||||||||||||||||||||||| ||||||    
T  42127196 ctacaaagatactcaaccttaaagttacctcctttgtaatccaagtttctcactctaa 42127139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 10282025 - 10282085
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatc-caagtttctctctctaagc 61  Q
    ||||||||||||||||||||   ||| ||||||||||| || |||||||||||||| ||||    
T  10282025 ctacaaagacactcaaccctaaagttacctcctttgtattctcaagtttctctctcaaagc 10282085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 29722386 - 29722330
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc 142  Q
    ||||||||||||||||||||||  | ||||| | ||  |||||||||||||||||||    
T  29722386 ctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgatttcc 29722330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 37556308 - 37556248
Alignment:
Q  179 accagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||||||||| |||  |||||||||  |||||||||||  |||||||||| ||||||||||    
T  37556308 accagtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaag 37556248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 24787181 - 24786948
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact-ta 102  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  |         ||||||||||||  ||    
T  24787181 acaaagacactcaaccctttggttccctcctttgttatccaagtt-ctctctctaagctcttccaagctctccttcaaaaaa--gcacaagaacacaata 24787085  T
Q  103 aatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatactta 202  Q
     ||||||||||||||| || | ||||||| ||||||||||||||||||||||||||| ||| || ||||||||  ||||||||||| |||||||||||||    
T  24787084 tatactagtcttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatactta 24786985  T
Q  203 atgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    | |||||||||||||||||||||||||||||||||||    
T  24786984 acgagcaagtttctgaatcgtgtcacgatttcccaag 24786948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 24202592 - 24202360
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||    
T  24202592 tctacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctccaaaata--tgcacaagaacact 24202495  T
Q  101 taaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgattt--acgtatgtcccaaggtaagaccagtccttgtcaaggata 198  Q
    |||||||||| ||||||| ||   |||||||||||||||||||||||||||||||||||  ||||  |||||||| || ||||||||||| |||||||||    
T  24202494 taaatactagccttcctctgatacaatcgtgtcacgatttccagatcgtgtcacgatttgaacgtgcgtcccaagatatgaccagtccttatcaaggata 24202395  T
Q  199 cttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    ||||| ||||||||||   ||||||||||||||||    
T  24202394 cttaacgagcaagtttgaaaatcgtgtcacgattt 24202360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 19366130 - 19365892
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacactt 101  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||    
T  19366130 ctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc-ctccaaaatctgcacaagaacactt 19366032  T
Q  102 aaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggatac 199  Q
    ||||||||||||||| | ||  ||||||||||||||||||||  |||||||||||||  |||||| ||| ||| ||| |||| |||||| ||  ||| |     
T  19366031 aaatactagtcttccactgataaaatcgtgtcacgatttccaagtcgtgtcacgattggtacgtacgtcacaatgtacgacctgtccttatcctggaaaa 19365932  T
Q  200 ttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| ||||||||||   ||||||||||||||||||||||    
T  19365931 ttaacgagcaagtttgaaaatcgtgtcacgatttcccaag 19365892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 104 - 239
Target Start/End: Complemental strand, 24793905 - 24793770
Alignment:
Q  104 atactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaa 203  Q
    ||||||||||||||| || | ||||||| ||||||||||||||||||||||||||| ||| || ||||||||  ||||||||||| ||||||||||||||    
T  24793905 atactagtcttcctctgaagcaatcgtgccacgatttccagatcgtgtcacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaa 24793806  T
Q  204 tgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
     |||||||||||||||||||||||||||||||||||    
T  24793805 cgagcaagtttctgaatcgtgtcacgatttcccaag 24793770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 19358666 - 19358530
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacactt 101  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||    
T  19358666 ctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc-ctccaaaatctgcacaagaacactt 19358568  T
Q  102 aaatactagtcttcctcagaggaaatcgtgtcacgatt 139  Q
    ||||||||||||||| | ||  ||||||||||||||||    
T  19358567 aaatactagtcttccactgataaaatcgtgtcacgatt 19358530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 19361255 - 19361119
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacactt 101  Q
    ||||||||||||||||||||   |||||||||||||||||| |||||||||||||||||||||||||||||||| ||       ||||||||||||||||    
T  19361255 ctacaaagacactcaaccctagagttccctcctttgtaatctaagtttctctctctaagctcttccaagctctc-ctccaaaatctgcacaagaacactt 19361157  T
Q  102 aaatactagtcttcctcagaggaaatcgtgtcacgatt 139  Q
    ||||||||||||||| | ||  ||||||||||||||||    
T  19361156 aaatactagtcttccactgataaaatcgtgtcacgatt 19361119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 44203495 - 44203347
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  44203495 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 44203396  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||    
T  44203395 ccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattt 44203347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 20622543 - 20622695
Alignment:
Q  87 tgcacaagaacacttaa-atactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||||| | ||||||| ||||||| || | ||| |||||||||||| ||| ||| || |||||||| ||||   ||||||||| |||||||    
T  20622543 tgcacaagaacactttatatactagccttcctctgaagcaattgtgtcacgattttccaaatcatgccacgatttgcgtaccacccaaggtatgaccagt 20622642  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| |||||||||||  ||||||||||||||||||||    
T  20622643 ccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttccca 20622695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 238
Target Start/End: Complemental strand, 9987064 - 9986910
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||| | ||| | ||  |||| ||||||||||||||||||||||||||||||  | | |  ||||||||||| ||||||    
T  9987064 ctgcacaagaacacttaaatactagccctccactgataaaattgtgtcacgatttccagatcgtgtcacgattggtgcatccgtcccaaggtatgaccag 9986965  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 238  Q
    ||||| | | ||| |||||| ||||||||||   |||||||||||||||||||||    
T  9986964 tccttattatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa 9986910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 41398565 - 41398718
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||||||| | || ||||||||| ||||||||||  ||||||||||||||| | |    | ||| ||||  |||||||    
T  41398565 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcagcggaccccaggtt-gaccagt 41398663  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41398664 ccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 41398718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 9036279 - 9036132
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||| | |||||||||||||| |  |||||||||||||||||| ||  ||||||||||||| | ||||   ||||||  | |||||||    
T  9036279 ctgcacaagaacacttta-tactagtcttcctctgttgaaatcgtgtcacgattttcccaatcgtgtcacgatctgcgtaacacccaagaaacgaccagt 9036181  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  9036180 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 9036132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 21053819 - 21053665
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||  | ||||| | ||  ||||||||||||||||||| |||||||||||||||  | | |  ||| ||||||| ||||||    
T  21053819 ctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgatttcctgatcgtgtcacgattggtgcatccgtctcaaggtatgaccag 21053720  T
Q  184 tccttgtcaaggatacttaatgagcaagttt-ctgaatcgtgtcacgatttccca 237  Q
    ||||| ||| ||| |||||| |||||||||| |  ||||||||||||||||||||    
T  21053719 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttccca 21053665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 40282238 - 40282088
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||  | ||||| | ||  ||||||||||||||||||| |||||||||||||||  | | |  ||||||||||| ||||||    
T  40282238 ctgcacaagaacacttaaatacatgccttccactgataaaatcgtgtcacgatttcctgatcgtgtcacgattggtgcatccgtcccaaggtatgaccag 40282139  T
Q  184 tccttgtcaaggatacttaatgagcaagttt-ctgaatcgtgtcacgattt 233  Q
    ||||| ||| ||| |||||| |||||||||| |  ||||||||||||||||    
T  40282138 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgattt 40282088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 41390910 - 41391063
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||||||| | || ||||||||| ||||||||||  ||||||||||||||| | |    | ||| ||||  |||||||    
T  41390910 gcacaagaacacaatatatactagtcttcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcagcggaccccaggtt-gaccagt 41391008  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  41391009 ccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaag 41391063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 1054790 - 1054637
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  || ||||||||| ||| | || ||||||||||||||||||||  ||||||||||||||| | |    || || ||||  |||||||    
T  1054790 gcacaagaacacaatatatactagtcctcccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggttcccaggtt-gaccagt 1054692  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  1054691 ccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaag 1054637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 25439675 - 25439522
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  |||||||||||| ||| | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  25439675 gcacaagaacacaataaatactagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacagtccccaggtt-gaccagt 25439577  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  |||||||||||| |||||||||||||||||||||    
T  25439576 ccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaag 25439522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 25444868 - 25444715
Alignment:
Q  88 gcacaagaacact-taaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||||||||  |||||||||||| ||| | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  |||||||    
T  25444868 gcacaagaacacaataaatactagtcctcccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccctaggtt-gaccagt 25444770  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  | |||||||||| |||||||||||||||||||||    
T  25444769 ccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaag 25444715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 239
Target Start/End: Complemental strand, 44023617 - 44023500
Alignment:
Q  123 gaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaat 220  Q
    ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  ||||||||||| |||  |||||||||  |||||||||||||||    
T  44023617 gaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagtccttatcagtgatacttaaccagcaagtttctgaat 44023519  T
Q  221 cgtgtcacgatttcccaag 239  Q
    |||||||||||||||||||    
T  44023518 cgtgtcacgatttcccaag 44023500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 47098651 - 47098594
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||    
T  47098651 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaa 47098594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 47102665 - 47102608
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||    
T  47102665 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctctaa 47102608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 239
Target Start/End: Complemental strand, 43988226 - 43988072
Alignment:
Q  87 tgcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccag 183  Q
    ||||||||| ||||| ||||||||||| | | | || ||||||||| ||||||||||  ||||||||||||||| | |    ||||| | ||  ||||||    
T  43988226 tgcacaagagcactttaaatactagtcctgccctgaagaaatcgtgccacgatttccctagatcgtgtcacgatatgcaacggtccccaagtt-gaccag 43988128  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||| |||  |||||||||  |||||||||||||||||||||||||||| |||||    
T  43988127 tccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaag 43988072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 13604448 - 13604393
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||||||||||||    
T  13604448 ctacaaagatactcaaccctaaagttccctcctttgtaatccaagtttctctctct 13604393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 239
Target Start/End: Original strand, 39445842 - 39445959
Alignment:
Q  123 gaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaat 220  Q
    ||||||||| ||||||||||  ||||||||||||||| | |    ||||| ||||  ||||||||||| |||  ||||||||| ||||||||||||| ||    
T  39445842 gaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaggtt-gaccagtccttatcagtgatacttaacgagcaagtttctggat 39445940  T
Q  221 cgtgtcacgatttcccaag 239  Q
    ||||||| |||||||||||    
T  39445941 cgtgtcatgatttcccaag 39445959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 232
Target Start/End: Complemental strand, 51765210 - 51765121
Alignment:
Q  145 atcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatt 232  Q
    ||||||||||||||  |||||| ||| ||||||| ||||||||||| ||| ||| |||||| ||||||||||   |||||||||||||||    
T  51765210 atcgtgtcacgattggtacgtacgtcacaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatt 51765121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 27104228 - 27104171
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    |||||||||||||||||| |   ||| |||||||||||||||||||||||||||||||    
T  27104228 ctacaaagacactcaaccttaaagttacctcctttgtaatccaagtttctctctctaa 27104171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 29652084 - 29652137
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctct 55  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||    
T  29652084 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctct 29652137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 32889709 - 32889766
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||||||||||||   ||| ||||||||| |||||||||||||||||||||    
T  32889709 ctacaaagacactcaaccctaaagttacctcctttgcaatccaagtttctctctctaa 32889766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 21536396 - 21536344
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    ||||||||||||||||||||   ||| ||||||||||||||||||||||||||    
T  21536396 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctc 21536344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 37070038 - 37070093
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||||||| |   ||| |||||||||||||||||||||||||||||    
T  37070038 ctacaaagacactcaaccataaagttacctcctttgtaatccaagtttctctctct 37070093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 9476533 - 9476590
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaa 59  Q
    ||||||||||| |||||||    ||| |||||||||||||||||||||||||||||||    
T  9476533 ctacaaagacattcaacccaaaagttacctcctttgtaatccaagtttctctctctaa 9476590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 51765250 - 51765197
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatt 139  Q
    ||||||||||||||||||||||||| ||||| | ||  ||||||||||||||||    
T  51765250 ctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatt 51765197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 19361116 - 19361036
Alignment:
Q  159 tacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||||| ||| ||||||| |||| |||||| ||  ||| |||||| ||||||||||   ||||||||||||||||||||||    
T  19361116 tacgtacgtcacaaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaag 19361036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 13598671 - 13598726
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||||||| |   ||| ||||||||||||||||| |||||||||||    
T  13598671 ctacaaagacactcaaccataaagttacctcctttgtaatccaattttctctctct 13598726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 13604372 - 13604275
Alignment:
Q  87 tgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagacca 182  Q
    |||||||||||||||| |||  |||||||  | ||  |||||||| |||| |||||| ||||||||||||||  |||||| | ||||||||| |||||    
T  13604372 tgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacgttttccaaatcgtgtcacgattgatacgtacgacccaaggtacgacca 13604275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 41398461 - 41398534
Alignment:
Q  4 acaaagacactcaaccc-tttggttccctcctttgtaatccaagtttctctctc-taagctcttccaagctctct 76  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| |||||||||  |||||| | ||||||||||    
T  41398461 acaaagacactcaacccatttggttccctcctttgctatccaag-ttctctctcaaaagctcatacaagctctct 41398534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 3281978 - 3282030
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    |||||||||||||||||| |   ||| |||| |||||||||||||||||||||    
T  3281978 ctacaaagacactcaaccataaagttacctcatttgtaatccaagtttctctc 3282030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 40816640 - 40816580
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaat-ccaagtttctctctctaagc 61  Q
    ||||||||||||||||||||   ||| ||||||||||| | ||||||||||||||| ||||    
T  40816640 ctacaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctcaaagc 40816580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 47703759 - 47703699
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatc-caagtttctctctctaagc 61  Q
    ||||||||||||||||||||   ||| ||||||||||| || |||||||||||||| ||||    
T  47703759 ctacaaagacactcaaccctaaagttacctcctttgtattctcaagtttctctctcaaagc 47703699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 86 - 238
Target Start/End: Original strand, 11475 - 11629
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||| ||||| | ||  |||||||||||||||||||||||||||||||||||  | |||| ||||||||||| ||||||    
T  11475 ctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatttccagatcgtgtcacgattggtgcgtacgtcccaaggtacgaccag 11574  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 238  Q
    ||||| ||| ||| |||||| ||||||||||   |||||||||||||||||||||    
T  11575 tccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa 11629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 238
Target Start/End: Original strand, 9089 - 9184
Alignment:
Q  145 atcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaa 238  Q
    ||||||||||||||  | |||| ||||||||||| ||||||||||| ||| ||| |||||| ||||||||||   |||||||||||||||||||||    
T  9089 atcgtgtcacgattggtgcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaa 9184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 9049 - 9102
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatt 139  Q
    ||||||||||||||||||||||||| ||||| | ||  ||||||||||||||||    
T  9049 ctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatt 9102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 17775 - 17638
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnctgcacaagaacact 100  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||||||    
T  17775 tctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc-cttcaaaatctgcacaagaacact 17677  T
Q  101 taaatactagtcttcctcagaggaaatcgtgtcacgatt 139  Q
    |||||||||| ||||| | ||  ||||||||||||||||    
T  17676 taaatactagccttccactgataaaatcgtgtcacgatt 17638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 23868 - 23794
Alignment:
Q  1 tctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc 75  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23868 tctacaaagacactcaaccctagagttccctcctttgtaatccaagtttctctctctaagctcttccaagctctc 23794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 17634 - 17555
Alignment:
Q  160 acgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||| ||| ||||||| ||||| ||||| |||||||||||||| ||||||||||   |||| |||||||||||||||||    
T  17634 acgtacgtcacaaggtacgaccaatccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaag 17555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 2908 - 3060
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  2908 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 3007  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| ||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  3008 ccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttccca 3060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 4033 - 4185
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    ||||||| |||||||||| |||||||||||||| |    |||||||||||||||| ||  || |||||||||||| |||  ||||||||| | |||||||    
T  4033 ctgcacaggaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaattgtgtcacgatttgcgtccgtcccaaggaacgaccagt 4132  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttccca 237  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||||||    
T  4133 ccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttccca 4185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 86 - 233
Target Start/End: Complemental strand, 6137 - 5989
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgattt-ccagatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||||||| |||||||||||||| |    |||||||||||||||| ||  ||||||||||||||| |||  ||||||||| | |||||||    
T  6137 ctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttcccaatcgtgtcacgatttgcgtccgtcccaaggaacgaccagt 6038  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgattt 233  Q
    |||| |||||||||||||| |||||||||||   |||||||||||||||    
T  6037 ccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 761 - 613
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagaccag 183  Q
    ||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||| |||||||||| |||  |||||| ||| ||||||| ||||||    
T  761 ctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgatttccaaatcgtgtcacaattggtacgtacgtcacaaggtacgaccag 662  T
Q  184 tccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatt 232  Q
    ||| | ||  ||| |||||| |||||| |||   |||||||||||||||    
T  661 tccctatcctggaaacttaacgagcaaatttgaaaatcgtgtcacgatt 613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 239
Target Start/End: Complemental strand, 34921 - 34677
Alignment:
Q  4 acaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctctaagctcttccaagctctctctnnnnnnnct--------gcacaaga 95  Q
    ||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||| | ||||||||||         ||        ||| ||||    
T  34921 acaaagacactcaacccattggttccctcctttgctatccaag-ttctctctctaagctcatacaagctctcttaagattcacttcaaaaaagcaaaaga 34823  T
Q  96 acac-ttaaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtca 192  Q
    ||||  || ||||||||||||||| || ||||| ||| ||||||||||  ||||||||||||||| | |    | |||||||| |||| ||||||| |||    
T  34822 acacaatatatactagtcttcctctgaagaaatagtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaggt-agacaagtccttatca 34724  T
Q  193 aggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
      ||||||||| |||||||||||||||||||||||||||||||||||    
T  34723 gtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaag 34677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 2015 - 1862
Alignment:
Q  88 gcacaagaacacttaa-atactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| | ||||||||| | | | || ||||||||||||||||||||  ||||||||||||||| | |    ||||||||||  |||||||    
T  2015 gcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggtt-gaccagt 1917  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  || ||||||  ||||||||||||||||||||||||||||||||||    
T  1916 ccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 1862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 148720 - 148567
Alignment:
Q  88 gcacaagaacacttaa-atactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| | ||||||||| | | | || ||||||||||||||||||||  ||||||||||||||| | |    ||||||||||  |||||||    
T  148720 gcacaagaacactttatatactagtcctgccctgaagaaatcgtgtcacgatttccctagatcgtgtcacgatctgcaacggtcccaaggtt-gaccagt 148622  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  || ||||||  ||||||||||||||||||||||||||||||||||    
T  148621 ccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 148567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 239
Target Start/End: Complemental strand, 3596 - 3460
Alignment:
Q  104 atactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagtccttgtcaaggatactt 201  Q
    ||||||||||||| | || |||||||||||||||||| |  ||||||||||||||| | |    ||||| ||||  ||| ||||||| |||  |||||||    
T  3596 atactagtcttcccctgaagaaatcgtgtcacgattttcctagatcgtgtcacgatctgcaacggtccccaggtt-gactagtccttatcattgatactt 3498  T
Q  202 aatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    || |||||||||||||||||||||||||||||||||||    
T  3497 aacgagcaagtttctgaatcgtgtcacgatttcccaag 3460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 3708 - 3657
Alignment:
Q  4 acaaagacactcaaccc-tttggttccctcctttgtaatccaagtttctctct 55  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| ||||||||    
T  3708 acaaagacactcaacccatttggttccctcctttgctatccaag-ttctctct 3657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 14060 - 13907
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| |   | |||||||||||| ||||||||||  ||||||||||||||| | |    ||||| | ||  |||||||    
T  14060 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggtccccaagtt-gaccagt 13962  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  13961 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 13907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 18940 - 18787
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||| ||||| | | | || ||||||||| ||||||||||  ||||||||||||||||| |    ||||| ||| | |||||||    
T  18940 gcacaagaacactttaaatattagtcctgccctgaagaaatcgtgccacgatttccttagatcgtgtcacgatttgcaacggtccccagg-atgaccagt 18842  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    | || |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  18841 ctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 18787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 176726 - 176573
Alignment:
Q  88 gcacaagaacactt-aaatactagtcttcctcagaggaaatcgtgtcacgatttcc--agatcgtgtcacgatttacgtatgtcccaaggtaagaccagt 184  Q
    |||||||||||||| ||||||||||| |   | |||||||||||| ||||||||||  ||||||||||||||| | |    | ||||| ||  |||||||    
T  176726 gcacaagaacactttaaatactagtcctgtcctgaggaaatcgtgccacgatttccctagatcgtgtcacgatctgcaacggacccaaagtt-gaccagt 176628  T
Q  185 ccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    |||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  176627 ccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 176573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 8243 - 8188
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  8243 ctacaaagacactcaaccctaaagttccctcctttgtaatccaagtttctctctct 8188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 8168 - 8070
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagacca 182  Q
    ||||||| |||||||||||||| |||||||  | ||  ||||| || |||||||| || ||||||||||||||  |||||| | ||||||||| |||||    
T  8168 ctgcacacgaacacttaaataccagtcttcagctgataaaatcatgccacgattttcaaatcgtgtcacgattgatacgtacgacccaaggtacgacca 8070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 761 - 822
Alignment:
Q  178 gaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||||| |||  |||||||||  ||||||||||||||||||||||||||||||||||    
T  761 gaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaag 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 22159 - 22063
Alignment:
Q  145 atcgtgtcacgatt--tacgtatgtcccaaggtaagaccagtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||||||||||  |||||| ||| ||||||| |||| |||||| |||  ||||||||| ||||||||||   ||||||||||||||||||||||    
T  22159 atcgtgtcacgattggtacgtacgtcacaaggtacgacctgtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaag 22063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 22199 - 22146
Alignment:
Q  86 ctgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatt 139  Q
    ||||||||||||||||||||||||| ||||| | ||  ||||||||||||||||    
T  22199 ctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgatt 22146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 36658 - 36603
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  36658 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 36603  T

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Target: scaffold0087; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 43787 - 43732
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||||||||||||    
T  43787 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctctct 43732  T

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Target: scaffold0006 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 133105 - 133050
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||||| ||||||||||   |||||||||||||||||||||||||||||||||    
T  133105 ctacaaagaaactcaaccctaaagttccctcctttgtaatccaagtttctctctct 133050  T

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Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 5956 - 6011
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    |||||||||||||||||| |   ||| ||||||||||||||||| |||||||||||    
T  5956 ctacaaagacactcaaccataaagttacctcctttgtaatccaattttctctctct 6011  T

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Target: scaffold0006; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 133029 - 132932
Alignment:
Q  87 tgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt--tacgtatgtcccaaggtaagacca 182  Q
    |||||||||||||||| |||  |||||||  | ||  |||||||| |||| |||||| ||||||||||||||  |||||| | ||||||||| |||||    
T  133029 tgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacgttttccaaatcgtgtcacgattgatacgtacgacccaaggtacgacca 132932  T

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Target: scaffold0665 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 8112 - 8169
Alignment:
Q  182 agtccttgtcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaag 239  Q
    ||||||| |||  ||||||||| ||||||||||||||||||||||||||||| |||||    
T  8112 agtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaag 8169  T

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Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 85954 - 86006
Alignment:
Q  2 ctacaaagacactcaaccctttggttccctcctttgtaatccaagtttctctc 54  Q
    ||||||||||||||||||||   ||| ||||||||||||||||||||||||||    
T  85954 ctacaaagacactcaaccctaaagttacctcctttgtaatccaagtttctctc 86006  T

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Target: scaffold0098 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 45474 - 45525
Alignment:
Q  6 aaagacactcaaccctttggttccctcctttgtaatccaagtttctctctct 57  Q
    ||||||| ||||||||   ||| |||||||||||||||||||||||||||||    
T  45474 aaagacattcaaccctaaagttacctcctttgtaatccaagtttctctctct 45525  T

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Target: scaffold0098; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 45546 - 45617
Alignment:
Q  87 tgcacaagaacacttaaatactagtcttcctcagaggaaatcgtgtcacgatttccagatcgtgtcacgatt 158  Q
    ||||||||||||||||||||| | |||||  | ||  |||||||| |||| |||||| ||||||||||||||    
T  45546 tgcacaagaacacttaaataccaatcttcagctgataaaatcgtgccacgttttccaaatcgtgtcacgatt 45617  T

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