View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3820_low_150 (Length: 245)
Name: NF3820_low_150
Description: NF3820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3820_low_150 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 2890351 - 2890569
Alignment:
| Q |
13 |
attctatcataaatgaacaaaatgttacacactgtgaatatttagaataaaatctatttacttgtaatctaccaacttcaaaagtttcaatataaaccta |
112 |
Q |
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| T |
2890351 |
attctatcataaatgaacaaaaagttacacactgtgaatatttagaataaaatctatttacttgtaatctaccaacttcaaaagtttcaatataaaccta |
2890450 |
T |
|
| Q |
113 |
aagttacattcagtgtgaatacttcaaaagtttgaatataaacccaaagttacctttagtgtgaataaaagatctaaccatatgtgtcatattatatggt |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
2890451 |
aagttacattcagtgtgaatacttcaaaagtttgaatataaacccaaagttacctttagtgtgaataaaagatct-accatatgtgtcatattatatggt |
2890549 |
T |
|
| Q |
213 |
ccactcttatttttcttctt |
232 |
Q |
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|||||||||||||||||||| |
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| T |
2890550 |
ccactcttatttttcttctt |
2890569 |
T |
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