View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3823_low_21 (Length: 221)
Name: NF3823_low_21
Description: NF3823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3823_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 27329507 - 27329646
Alignment:
| Q |
17 |
agagggaacacgtctatttgctaaatagtactgctctcagacatggacaaatgttgccacaaaagtataaattctgcactcaacaagctggctgttgcag |
116 |
Q |
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| T |
27329507 |
agagggaacacgtctatttgctaaatagt---gctctcagaaatggacaaatgttgccacaaaagtataaattctgcactcaataagctggctgttgcag |
27329603 |
T |
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| Q |
117 |
actgtgaagagagaaaggaaagtatattgaatgttgtgctctc |
159 |
Q |
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| T |
27329604 |
actgtgaagagagaaaggaaagtatattgaatgttgtgctctc |
27329646 |
T |
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