View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3825_low_31 (Length: 266)

Name: NF3825_low_31
Description: NF3825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3825_low_31
NF3825_low_31
[»] chr3 (31 HSPs)
chr3 (105-255)||(6941514-6941664)
chr3 (81-255)||(6733225-6733399)
chr3 (105-255)||(6944627-6944777)
chr3 (81-255)||(7585016-7585194)
chr3 (106-255)||(6782633-6782782)
chr3 (141-255)||(6557019-6557133)
chr3 (100-173)||(6410325-6410398)
chr3 (198-255)||(7585542-7585599)
chr3 (199-255)||(6944940-6944996)
chr3 (198-255)||(6523790-6523847)
chr3 (198-255)||(6530831-6530888)
chr3 (198-255)||(6841879-6841936)
chr3 (199-255)||(6523909-6523965)
chr3 (199-255)||(7585308-7585364)
chr3 (186-241)||(6242976-6243031)
chr3 (196-250)||(5247846-5247900)
chr3 (1-43)||(6531002-6531044)
chr3 (89-157)||(6785020-6785086)
chr3 (198-254)||(8571251-8571307)
chr3 (202-250)||(6880191-6880239)
chr3 (199-254)||(4391215-4391270)
chr3 (199-254)||(5265754-5265809)
chr3 (198-241)||(5278336-5278379)
chr3 (14-56)||(7584984-7585027)
chr3 (7-45)||(6524170-6524208)
chr3 (7-45)||(6842125-6842163)
chr3 (1-30)||(6410429-6410458)
chr3 (198-231)||(6914772-6914805)
chr3 (1-30)||(6944556-6944585)
chr3 (202-250)||(6897763-6897811)
chr3 (198-254)||(8452318-8452374)
[»] scaffold0425 (2 HSPs)
scaffold0425 (199-255)||(10067-10123)
scaffold0425 (6-45)||(10331-10370)
[»] scaffold2053 (1 HSPs)
scaffold2053 (198-249)||(563-614)
[»] chr7 (1 HSPs)
chr7 (198-240)||(6575639-6575681)


Alignment Details
Target: chr3 (Bit Score: 143; Significance: 3e-75; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 105 - 255
Target Start/End: Original strand, 6941514 - 6941664
Alignment:
Q  105 aatatatgttcgtaccttccgaaccaaaaaggtttgaccaaaagtgggacccataacatctcattcctgttcaatgaggtcaattgtcaccatagggatg 204  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6941514 aatatttgttcgtaccttccgaaccaaaaagatttgaccaaaagtgggacccataacatctcattcctgttcaatgaggtcaattgtcaccatagggatg 6941613  T
Q  205 tgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6941614 tgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 6941664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 81 - 255
Target Start/End: Original strand, 6733225 - 6733399
Alignment:
Q  81 atttgattcaatggtttggttaagaatatatgttcgtaccttccgaaccaaaaaggtttgaccaaaagtgggacccataacatctcattcctgttcaatg 180  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| | ||||    
T  6733225 atttgattcaatagtttggttaagaatatatgttcgtaccttccaaaccaaaaagatttgaccaaacgtgggacccataacatctcattcctgcttaatg 6733324  T
Q  181 aggtcaattgtcaccatagggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 255  Q
       |||||   |||  | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6733325 ccatcaatccacacattcgggatgtgactaattgtatgccaacgctctcctccctccttttcatacttctccttt 6733399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 105 - 255
Target Start/End: Original strand, 6944627 - 6944777
Alignment:
Q  105 aatatatgttcgtaccttccgaaccaaaaaggtttgaccaaaagtgggacccataacatctcattcctgttcaatgaggtcaattgtcaccatagggatg 204  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||   |||  | ||||||    
T  6944627 aatatatgttcgtaccttccaaaccaaaaaggtttgaccaaaagtgggacccataacatctcattcctgtttaatgcgatcaatccacacactcgggatg 6944726  T
Q  205 tgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6944727 tgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 6944777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 255
Target Start/End: Original strand, 7585016 - 7585194
Alignment:
Q  81 atttgattcaatggtttggttaagaatatatgttcgtaccttccgaaccaaaaaggtttgaccaaaagtgggacccataacatctcattcctgttcaatg 180  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||| | |||     
T  7585016 atttgattcaatagtttggttaagaatatatgttcgtaccttccaaaccaaaaagatttgaccaaatgtgggacccataacatctcattcctgcttaatt 7585115  T
Q  181 aggtcaatt----gtcaccatagggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 255  Q
       ||||||      |||  | |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  7585116 tcatcaattaatccacacattcgggatgtgagtaattgtatgccaacgctctcctccctccttttcatacttctccttt 7585194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 106 - 255
Target Start/End: Complemental strand, 6782782 - 6782633
Alignment:
Q  106 atatatgttcgtaccttccgaaccaaaaaggtttgaccaaaagtgggacccataacatctcattcctgttcaatgaggtcaattgtcaccatagggatgt 205  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| |   |||   ||||||   |||   ||||||||    
T  6782782 atatatgttcgtacattcagaaccaaaaaggtttgaccaaaagtgggacccataacttctcattccggcctaattccgtcaatcaacacacgagggatgt 6782683  T
Q  206 gacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6782682 gacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 6782633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 6557133 - 6557019
Alignment:
Q  141 accaaaagtgggacccataacatctcattcctgttcaatgaggtcaattgtcaccatagggatgtgacaaattgtatgccaacgctctcctccctccttt 240  Q
    ||||||||||||||||||||||||||||| ||||| |||   ||||||   |||   ||||||||||| |||||||||||||||||||||||||||||||    
T  6557133 accaaaagtgggacccataacatctcatttctgttgaatatagtcaatccacacataagggatgtgactaattgtatgccaacgctctcctccctccttt 6557034  T
Q  241 tcatacttctccttt 255  Q
    |||||||||||||||    
T  6557033 tcatacttctccttt 6557019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 6410398 - 6410325
Alignment:
Q  100 ttaagaatatatgttcgtaccttccgaaccaaaaaggtttgaccaaaagtgggacccataacatctcattcctg 173  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6410398 ttaagtatatatgttcgtaccttccgaaccaaaaagatttgaccaaaagtgggacccataacatctcattcctg 6410325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 7585542 - 7585599
Alignment:
Q  198 agggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 255  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7585542 agggatgtgactaattgtatgccaacgctctcctccctccttttcatacttctccttt 7585599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 6944940 - 6944996
Alignment:
Q  199 gggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 255  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6944940 gggatgtgactaattgtatgccaacgctctcctccctccttttcatacttctccttt 6944996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 6523847 - 6523790
Alignment:
Q  198 agggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 255  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  6523847 agggatgtgactaattgtatgccaaagctctcctccctccttttcatacttctccttt 6523790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 6530888 - 6530831
Alignment:
Q  198 agggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 255  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  6530888 agggatgtgaccaattgtatgccaacgctctcgtccctccttttcatacttctccttt 6530831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 6841936 - 6841879
Alignment:
Q  198 agggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 255  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  6841936 agggatgtgactaattgtgtgccaacgctctcctccctccttttcatacttctccttt 6841879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 6523965 - 6523909
Alignment:
Q  199 gggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 255  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  6523965 gggatgtgagtaattgtatgccaacgctctcctccctccttttcatacttctccttt 6523909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 7585308 - 7585364
Alignment:
Q  199 gggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 255  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  7585308 gggatgtgactaattgtatgccaacactctcctccctccttttcatacttctccttt 7585364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 6242976 - 6243031
Alignment:
Q  186 aattgtcaccatagggatgtgacaaattgtatgccaacgctctcctccctcctttt 241  Q
    |||||||||  |||||||||||||||||||||||||||||||||||  ||||||||    
T  6242976 aattgtcacgttagggatgtgacaaattgtatgccaacgctctccttgctcctttt 6243031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 5247846 - 5247900
Alignment:
Q  196 atagggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttct 250  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||  |||||||    
T  5247846 atagggatgtgacgaattgtatgccaacactctcctccctccttttggtacttct 5247900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6531044 - 6531002
Alignment:
Q  1 aaattgaagtcagaaaataagaatataaaaaagggaaataaaa 43  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  6531044 aaattgaagtctgaaaataagaatataaaaaagggaaataaaa 6531002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 6785086 - 6785020
Alignment:
Q  89 caatggtttggttaagaatatatgttcgtaccttccgaaccaaaaaggtttgaccaaaagtgggaccca 157  Q
    |||||||||||||||||  |||||||| |||||||| |||||||||| ||||||||||  |||||||||    
T  6785086 caatggtttggttaaga--atatgttcataccttccaaaccaaaaagatttgaccaaacatgggaccca 6785020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 8571307 - 8571251
Alignment:
Q  198 agggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctcctt 254  Q
    ||||||||||| ||||||||||||||| |||||| ||| ||||| ||||||||||||    
T  8571307 agggatgtgacgaattgtatgccaacgttctccttccttcttttgatacttctcctt 8571251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 6880191 - 6880239
Alignment:
Q  202 atgtgacaaattgtatgccaacgctctcctccctccttttcatacttct 250  Q
    ||||||| |||||||||||||||||||||| |||||||||  |||||||    
T  6880191 atgtgactaattgtatgccaacgctctccttcctccttttggtacttct 6880239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 4391270 - 4391215
Alignment:
Q  199 gggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctcctt 254  Q
    ||||||||||||||||||||||| | ||||||| |||||||||  |||| ||||||    
T  4391270 gggatgtgacaaattgtatgccagcactctccttcctccttttggtactgctcctt 4391215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 5265754 - 5265809
Alignment:
Q  199 gggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctcctt 254  Q
    ||||| |||||||| |||||||||||||||||| |||||||||  |||| ||||||    
T  5265754 gggatatgacaaatcgtatgccaacgctctccttcctccttttggtactgctcctt 5265809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 5278336 - 5278379
Alignment:
Q  198 agggatgtgacaaattgtatgccaacgctctcctccctcctttt 241  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||    
T  5278336 agggatgtgacaaattgtattccaactctctccttcctcctttt 5278379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 7584984 - 7585027
Alignment:
Q  14 aaaataagaatataaaaaa-gggaaataaaagatttgattcaat 56  Q
    |||| |||||||||||||| ||||||||||||||||||||||||    
T  7584984 aaaagaagaatataaaaaacgggaaataaaagatttgattcaat 7585027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 6524208 - 6524170
Alignment:
Q  7 aagtcagaaaataagaatataaaaaagggaaataaaaga 45  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  6524208 aagtcagaaaataagaataaaaaaaggggaaataaaaga 6524170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 6842163 - 6842125
Alignment:
Q  7 aagtcagaaaataagaatataaaaaagggaaataaaaga 45  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  6842163 aagtcagaaaataagaataaaaaaaggggaaataaaaga 6842125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 6410458 - 6410429
Alignment:
Q  1 aaattgaagtcagaaaataagaatataaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  6410458 aaattgaagtcagaaaataagaatataaaa 6410429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 6914772 - 6914805
Alignment:
Q  198 agggatgtgacaaattgtatgccaacgctctcct 231  Q
    |||||||||||||||| |||||||||||||||||    
T  6914772 agggatgtgacaaattctatgccaacgctctcct 6914805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 6944556 - 6944585
Alignment:
Q  1 aaattgaagtcagaaaataagaatataaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  6944556 aaattgaagtcagaaaataagaatataaaa 6944585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 6897763 - 6897811
Alignment:
Q  202 atgtgacaaattgtatgccaacgctctcctccctccttttcatacttct 250  Q
    ||||||| |||||||||||||| ||||||| |||||||||  |||||||    
T  6897763 atgtgactaattgtatgccaacactctccttcctccttttggtacttct 6897811  T

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Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 8452318 - 8452374
Alignment:
Q  198 agggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctcctt 254  Q
    |||||||||||||||||||| ||   ||||||||||||||||||  |||||| ||||    
T  8452318 agggatgtgacaaattgtatcccgctgctctcctccctccttttggtacttcacctt 8452374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 10123 - 10067
Alignment:
Q  199 gggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttctccttt 255  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  10123 gggatgtgactaattgtatgccaaagctctcctccctccttttcatacttctccttt 10067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 10370 - 10331
Alignment:
Q  6 gaagtcagaaaataagaatataaaaaagggaaataaaaga 45  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  10370 gaagtcagaaaataagaataaaaaaaggggaaataaaaga 10331  T

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Target: scaffold2053 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold2053
Description:

Target: scaffold2053; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 614 - 563
Alignment:
Q  198 agggatgtgacaaattgtatgccaacgctctcctccctccttttcatacttc 249  Q
    ||||||||||| |||||||||||||  |||||||||||||||||||||||||    
T  614 agggatgtgactaattgtatgccaattctctcctccctccttttcatacttc 563  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 240
Target Start/End: Complemental strand, 6575681 - 6575639
Alignment:
Q  198 agggatgtgacaaattgtatgccaacgctctcctccctccttt 240  Q
    |||||| |||| ||||||||||||||| |||||||||||||||    
T  6575681 agggatttgacgaattgtatgccaacgatctcctccctccttt 6575639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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