View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3826_high_4 (Length: 295)

Name: NF3826_high_4
Description: NF3826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3826_high_4
NF3826_high_4
[»] chr2 (34 HSPs)
chr2 (2-268)||(13140433-13140708)
chr2 (158-239)||(43971849-43971930)
chr2 (158-237)||(26845517-26845596)
chr2 (160-237)||(32622216-32622293)
chr2 (158-237)||(3217283-3217362)
chr2 (158-237)||(3221162-3221241)
chr2 (158-239)||(13140286-13140367)
chr2 (158-234)||(32622524-32622600)
chr2 (52-159)||(6795364-6795470)
chr2 (158-237)||(39060306-39060385)
chr2 (163-236)||(24065872-24065945)
chr2 (158-234)||(1353138-1353214)
chr2 (166-237)||(3217498-3217569)
chr2 (158-239)||(14473865-14473946)
chr2 (158-239)||(24015808-24015888)
chr2 (158-234)||(6795507-6795583)
chr2 (161-237)||(14473504-14473580)
chr2 (159-239)||(30390153-30390233)
chr2 (158-237)||(15988585-15988663)
chr2 (158-237)||(27956723-27956802)
chr2 (158-237)||(44995395-44995473)
chr2 (158-244)||(1352823-1352909)
chr2 (158-228)||(27957056-27957126)
chr2 (158-236)||(29526929-29527007)
chr2 (135-233)||(36006221-36006319)
chr2 (160-237)||(43513896-43513973)
chr2 (186-238)||(14424236-14424288)
chr2 (158-237)||(13490172-13490251)
chr2 (161-234)||(24284138-24284211)
chr2 (158-235)||(29526596-29526672)
chr2 (171-236)||(38573284-38573349)
chr2 (158-198)||(15988556-15988596)
chr2 (190-234)||(36122064-36122108)
chr2 (186-234)||(43531929-43531977)
[»] chr4 (39 HSPs)
chr4 (158-239)||(49983789-49983870)
chr4 (158-237)||(11306589-11306668)
chr4 (160-237)||(17524202-17524279)
chr4 (158-235)||(45505395-45505472)
chr4 (68-235)||(20268894-20269070)
chr4 (158-235)||(24671952-24672029)
chr4 (158-238)||(18415022-18415102)
chr4 (157-237)||(31143733-31143813)
chr4 (158-237)||(48658368-48658447)
chr4 (158-237)||(49984134-49984213)
chr4 (158-232)||(4592691-4592765)
chr4 (160-237)||(17524541-17524618)
chr4 (172-237)||(31141677-31141742)
chr4 (158-235)||(43913394-43913471)
chr4 (157-237)||(45505057-45505137)
chr4 (158-237)||(45170851-45170930)
chr4 (68-159)||(54702197-54702288)
chr4 (158-239)||(4416472-4416553)
chr4 (157-237)||(20871137-20871216)
chr4 (158-238)||(48845709-48845789)
chr4 (158-232)||(12292892-12292966)
chr4 (158-236)||(37724731-37724809)
chr4 (158-235)||(48846049-48846126)
chr4 (157-234)||(52485343-52485420)
chr4 (158-234)||(4416813-4416889)
chr4 (91-159)||(4592586-4592654)
chr4 (158-234)||(36752860-36752936)
chr4 (158-237)||(37724437-37724516)
chr4 (158-236)||(20870799-20870876)
chr4 (158-232)||(38916961-38917035)
chr4 (158-218)||(18414739-18414799)
chr4 (157-236)||(5665778-5665857)
chr4 (158-237)||(12293233-12293312)
chr4 (162-235)||(52485681-52485755)
chr4 (158-211)||(16399251-16399304)
chr4 (158-211)||(45170679-45170732)
chr4 (158-235)||(46397306-46397383)
chr4 (158-198)||(4416542-4416582)
chr4 (158-238)||(5688729-5688809)
[»] chr8 (25 HSPs)
chr8 (52-237)||(7535298-7535483)
chr8 (158-239)||(18429438-18429519)
chr8 (163-239)||(4623441-4623517)
chr8 (158-235)||(9710216-9710293)
chr8 (158-231)||(18935384-18935457)
chr8 (160-235)||(7645121-7645196)
chr8 (158-237)||(34439559-34439638)
chr8 (160-234)||(16049815-16049889)
chr8 (160-237)||(7644778-7644854)
chr8 (157-234)||(18548539-18548616)
chr8 (167-235)||(21445985-21446053)
chr8 (158-234)||(34687755-34687831)
chr8 (160-234)||(3016019-3016093)
chr8 (158-235)||(4623069-4623146)
chr8 (158-237)||(18429659-18429737)
chr8 (167-226)||(18548878-18548937)
chr8 (158-237)||(18935051-18935130)
chr8 (157-198)||(25879860-25879901)
chr8 (158-198)||(4623378-4623418)
chr8 (158-234)||(7535589-7535665)
chr8 (52-111)||(16049672-16049731)
chr8 (158-237)||(34439220-34439299)
chr8 (158-239)||(23870997-23871078)
chr8 (158-199)||(34687819-34687860)
chr8 (158-198)||(9710282-9710322)
[»] chr1 (38 HSPs)
chr1 (158-237)||(42604628-42604707)
chr1 (163-235)||(48171777-48171849)
chr1 (52-143)||(142941-143032)
chr1 (67-237)||(25622606-25622785)
chr1 (158-235)||(48171442-48171519)
chr1 (67-159)||(35795523-35795615)
chr1 (158-238)||(42604965-42605045)
chr1 (158-237)||(33459893-33459972)
chr1 (160-239)||(33460223-33460302)
chr1 (160-235)||(37245637-37245712)
chr1 (161-237)||(8718535-8718611)
chr1 (158-234)||(31872709-31872785)
chr1 (158-238)||(31872935-31873014)
chr1 (158-237)||(19987332-19987411)
chr1 (158-237)||(35795311-35795390)
chr1 (160-234)||(36783415-36783489)
chr1 (158-235)||(35795652-35795729)
chr1 (158-234)||(3072979-3073055)
chr1 (185-237)||(8718405-8718457)
chr1 (158-238)||(13189150-13189230)
chr1 (158-226)||(34518290-34518358)
chr1 (160-234)||(18519627-18519701)
chr1 (164-234)||(34517965-34518035)
chr1 (158-235)||(142811-142888)
chr1 (158-235)||(143149-143226)
chr1 (186-239)||(37245932-37245985)
chr1 (158-234)||(22792613-22792689)
chr1 (161-238)||(6043445-6043519)
chr1 (161-235)||(14420118-14420192)
chr1 (158-239)||(18519313-18519394)
chr1 (158-235)||(22792290-22792367)
chr1 (52-159)||(34518147-34518253)
chr1 (168-234)||(14419821-14419887)
chr1 (67-100)||(30972058-30972091)
chr1 (67-159)||(19987448-19987539)
chr1 (187-235)||(19987698-19987746)
chr1 (67-159)||(22792404-22792496)
chr1 (158-198)||(33459961-33460001)
[»] scaffold0548 (1 HSPs)
scaffold0548 (158-237)||(3367-3446)
[»] chr7 (18 HSPs)
chr7 (158-234)||(7460877-7460953)
chr7 (158-237)||(22566301-22566380)
chr7 (167-234)||(24185670-24185737)
chr7 (157-239)||(24188204-24188286)
chr7 (158-237)||(17813974-17814053)
chr7 (158-234)||(7460572-7460648)
chr7 (158-234)||(34536019-34536095)
chr7 (158-226)||(6376375-6376443)
chr7 (170-234)||(6376707-6376771)
chr7 (167-234)||(10017938-10018005)
chr7 (158-237)||(36469870-36469948)
chr7 (158-234)||(34535695-34535768)
chr7 (158-234)||(48462128-48462205)
chr7 (160-239)||(43511188-43511267)
chr7 (160-198)||(48462101-48462139)
chr7 (158-235)||(48461793-48461869)
chr7 (67-155)||(6376484-6376572)
chr7 (186-234)||(15999185-15999233)
[»] chr5 (9 HSPs)
chr5 (67-234)||(16642952-16643128)
chr5 (157-237)||(33992670-33992750)
chr5 (171-239)||(19328404-19328472)
chr5 (158-237)||(33992333-33992412)
chr5 (161-234)||(25508143-25508216)
chr5 (158-239)||(41563743-41563824)
chr5 (158-234)||(16642751-16642827)
chr5 (158-237)||(19935432-19935511)
chr5 (160-237)||(18697490-18697567)
[»] scaffold0056 (2 HSPs)
scaffold0056 (158-239)||(63059-63140)
scaffold0056 (161-237)||(62724-62800)
[»] scaffold0015 (2 HSPs)
scaffold0015 (164-237)||(47417-47490)
scaffold0015 (186-234)||(47291-47339)
[»] chr6 (21 HSPs)
chr6 (158-238)||(22793298-22793378)
chr6 (161-234)||(22793606-22793679)
chr6 (157-226)||(29674857-29674926)
chr6 (161-237)||(11122239-11122315)
chr6 (158-238)||(17342885-17342965)
chr6 (161-226)||(6209842-6209907)
chr6 (158-235)||(34829891-34829968)
chr6 (67-234)||(34829582-34829757)
chr6 (158-237)||(6611973-6612052)
chr6 (158-227)||(10567471-10567540)
chr6 (52-237)||(29675061-29675256)
chr6 (158-239)||(10567797-10567877)
chr6 (161-234)||(19279319-19279392)
chr6 (158-210)||(6611636-6611688)
chr6 (158-234)||(32629064-32629140)
chr6 (158-237)||(28613193-28613272)
chr6 (158-199)||(11121934-11121975)
chr6 (158-238)||(32629386-32629467)
chr6 (158-234)||(6210285-6210361)
chr6 (158-198)||(6273894-6273934)
chr6 (158-234)||(28613502-28613578)
[»] chr3 (14 HSPs)
chr3 (158-237)||(33419877-33419956)
chr3 (160-235)||(37285885-37285960)
chr3 (157-235)||(33241846-33241924)
chr3 (157-237)||(48618478-48618558)
chr3 (158-234)||(54341204-54341280)
chr3 (158-239)||(19541169-19541250)
chr3 (84-159)||(19540938-19541013)
chr3 (67-126)||(30547939-30547997)
chr3 (52-159)||(48618594-48618701)
chr3 (186-237)||(48618845-48618896)
chr3 (160-226)||(51388096-51388162)
chr3 (160-234)||(54111417-54111491)
chr3 (158-239)||(30547736-30547815)
chr3 (164-237)||(54341438-54341511)
[»] scaffold0400 (2 HSPs)
scaffold0400 (163-236)||(9913-9986)
scaffold0400 (158-237)||(9577-9656)
[»] scaffold0365 (2 HSPs)
scaffold0365 (163-236)||(10556-10629)
scaffold0365 (158-237)||(10220-10299)
[»] scaffold0045 (1 HSPs)
scaffold0045 (164-237)||(29608-29681)


Alignment Details
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 268
Target Start/End: Original strand, 13140433 - 13140708
Alignment:
Q  2 cattccgcgtcattatattgagtataataaaacaaaataatttnnnnnnntttaaagctgctttcctaaataagttaaatttcatcatccatattgtcag 101  Q
    ||||||||| ||| |||||||||||||||||| ||||||||||       |||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  13140433 cattccgcgacatgatattgagtataataaaataaaataattttaaaaaatttaaagctgcttttctaaataagttaaatttcatcgtccatattgtcgg 13140532  T
Q  102 ctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatgtgagtaac---------caacttgaaacttttaaaatataaatgaccaac 192  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||    
T  13140533 ctcgaatcttcaaacagtcaagtgatagaagaaactaacttattataatgtgagtaacgtattgaaccaacttgaaacttttaaaatataaatgaccaac 13140632  T
Q  193 ttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaactattttctactatgtctccctcttctcg 268  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13140633 ttaaaatctaaaataaacacaagggaccaaacatgcaattaagccaactattttctactatgtctccctcttctcg 13140708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 43971849 - 43971930
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    ||||||||||||||||||||| | |  |||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  43971849 accaacttgaaacttttaaaacacatgtgaccaacttgaaacctaaaataaacataagggaccaaacatgcaattaagccaa 43971930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 26845517 - 26845596
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||||| ||||  ||||||||| ||| |||||||||||| |||||||||||||||||||| ||||    
T  26845517 accaacttgaaacttttaaaacataagggaccaacttaaaacctaaaataaacataagggaccaaacatgcaattcagcc 26845596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 32622293 - 32622216
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||| ||||||||||||| ||||  ||||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  32622293 caactggaaacttttaaaacataagagaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaagcc 32622216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 3217362 - 3217283
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||| ||||||| ||||  ||||||| ||||| |||| ||| |||||||||||||||||||||||||||||    
T  3217362 accaacttgaaacctttaaaacataagggaccaacatgaaacctaagatatacacaagggaccaaacatgcaattaagcc 3217283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 3221162 - 3221241
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||||| ||||  ||||||| |||||||||| ||| |||||| ||||||||||||| ||||||||    
T  3221162 accaacttgaaacttttaaaacataagggaccaacatgaaatctaagatatacacaacggaccaaacatgctattaagcc 3221241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 13140367 - 13140286
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    |||||||| |||||||||||| ||||| ||||||||| ||| |||||||||||| |||| | ||||||||||| ||||||||    
T  13140367 accaacttaaaacttttaaaacataaaagaccaacttaaaacctaaaataaacataaggcatcaaacatgcaagtaagccaa 13140286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 32622524 - 32622600
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||| |||||||||||| || || ||||||||| ||| |||||||||||| |||||| |||||||||||||||    
T  32622524 accaacttcaaacttttaaaacatgaaggaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaa 32622600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 159
Target Start/End: Original strand, 6795364 - 6795470
Alignment:
Q  52 tttaaagctgctttcctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatg 151  Q
    |||||| ||| ||| |||||||||||||||| ||||||||||||||||| | ||||||||||||| || ||||||  |||   |||| ||||||||||||    
T  6795364 tttaaaactgattttctaaataagttaaattccatcatccatattgtcaac-cgaatctttcaacggttaagtgacggaaaggactatcttattataatg 6795462  T
Q  152 tgagtaac 159  Q
    | ||||||    
T  6795463 ttagtaac 6795470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 39060385 - 39060306
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||| |||||||||||| || |  ||||||||| ||| |||||||||||| |||||| ||||||||||||||||||    
T  39060385 accaacttaaaacttttaaaacattagggaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaagcc 39060306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 24065945 - 24065872
Alignment:
Q  163 cttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagc 236  Q
    |||||||||||||||| ||||  |||||| |||||| || |||||||||||||||| ||||||| |||||||||    
T  24065945 cttgaaacttttaaaacataagggaccaaattgaaacctcaaataaacacaagggatcaaacattcaattaagc 24065872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 1353138 - 1353214
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||||||||||||||| ||||  ||||||||| ||| ||||||||||||  || |||||||||| |||||||    
T  1353138 accaacttgaaacttttaaaacataagagaccaacttaaaacctaaaataaacatgagagaccaaacatacaattaa 1353214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 3217498 - 3217569
Alignment:
Q  166 gaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||| |||   ||||||||||||| || |||||||||||||||  ||||||||||||||||||    
T  3217498 gaaacttttaaaacataggggaccaacttgaaacctgaaataaacacaaggggacaaacatgcaattaagcc 3217569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 14473865 - 14473946
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    |||||||| |||||||||||| ||||  |||| |||||||| |||||||||||  ||||| | |||||||||| ||||||||    
T  14473865 accaacttaaaacttttaaaacataagggacctacttgaaacctaaaataaacgtaaggggctaaacatgcaactaagccaa 14473946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 24015888 - 24015808
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    |||||||| |||||||||||| ||||  || |||||||||| |||||||||||| ||||||  |||||||||||||| ||||    
T  24015888 accaacttaaaacttttaaaacataagggatcaacttgaaaactaaaataaacataaggga-taaacatgcaattaaaccaa 24015808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 6795507 - 6795583
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||| |||||||||||| ||||  ||||||||| ||| |||||||||| | | |||| |||||||||||||||    
T  6795507 accaactttaaacttttaaaacataatggaccaacttaaaacctaaaataaatataggggatcaaacatgcaattaa 6795583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 14473580 - 14473504
Alignment:
Q  161 aacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||| |||||||||||| ||||  ||||||||  |||  ||||||||||| ||| |||||||||||||||||||||    
T  14473580 aacttaaaacttttaaaacataagggaccaactcaaaacttaaaataaacaaaagcgaccaaacatgcaattaagcc 14473504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 30390153 - 30390233
Alignment:
Q  159 ccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    |||||||||||| ||| ||||| ||||||||||||| ||| ||||||||||   ||| ||| |||||| ||||||||||||    
T  30390153 ccaacttgaaacatttgaaataaaaatgaccaacttaaaacctaaaataaatgtaagagacaaaacatacaattaagccaa 30390233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 15988585 - 15988663
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| | |||||||||| ||||  |||||| ||||||||||||    
T  15988585 accaacttgaaacttttaaaacataag-gaccaacatgaaaccgaaaataaacataaggacccaaacctgcaattaagcc 15988663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 27956802 - 27956723
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||| || |||||||||||| || || |||| | || ||| |||||||||||| |||||| ||||||||||||||||||    
T  27956802 accaatttaaaacttttaaaacatgaaggacctatttaaaaactaaaataaacataagggatcaaacatgcaattaagcc 27956723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 44995395 - 44995473
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||||||||||||||||||| ||  |||||||| ||| |||||||||||  |||||  |||| |||||||||||||    
T  44995395 accaacttgaaacttttaaaatatgaagtaccaacttaaaaactaaaataaacgtaaggggtcaaa-atgcaattaagcc 44995473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 1352909 - 1352823
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaactatt 244  Q
    |||||||| ||| || ||||||| ||  |||||| || ||| |||||||||||| |||| | |||||||||||||||||||| ||||    
T  1352909 accaacttaaaatttgtaaaatacaagggaccaatttaaaacctaaaataaacataaggaatcaaacatgcaattaagccaaatatt 1352823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 27957056 - 27957126
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgc 228  Q
    ||||| || |||||||||||||||||  |||| |||||||| |||||||||||| ||| || |||||||||    
T  27957056 accaagttaaaacttttaaaatataagagacctacttgaaacctaaaataaacataagagatcaaacatgc 27957126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 29526929 - 29527007
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagc 236  Q
    |||||||| |||||||||||| ||||  ||||||||| |||  ||||||||||| ||||||  |||||| |||||||||    
T  29526929 accaacttaaaacttttaaaacataatggaccaacttaaaaattaaaataaacataagggattaaacatacaattaagc 29527007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 36006221 - 36006319
Alignment:
Q  135 actaacttattataatgtgagtaaccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaatta 233  Q
    |||||||||| | ||| | ||| |||||||| |||| ||||||| ||||||||||||||| |||  ||||||||| | |||| | ||| ||||||||||    
T  36006221 actaacttatcaaaatataagtcaccaacttaaaacatttaaaacataaatgaccaacttaaaacttaaaataaaaataaggaatcaatcatgcaatta 36006319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 43513896 - 43513973
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||| ||||||| || | ||||  ||||||||||||| |||| ||||||| |||||| ||||||||||| ||||||    
T  43513896 caactttaaactttcaagacataagagaccaacttgaaacctaatataaacataagggatcaaacatgcaagtaagcc 43513973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 14424288 - 14424236
Alignment:
Q  186 gaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcca 238  Q
    ||||||||||||| |||||||||||| ||| | | ||||||||||||||||||    
T  14424288 gaccaacttgaaacctaaaataaacataagaggctaaacatgcaattaagcca 14424236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 13490251 - 13490172
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||| |||||||||||| ||||| || |||||| ||| ||||| |||||| ||| || || || ||||||||||||    
T  13490251 accaacttaaaacttttaaaacataaaggatcaacttaaaaactaaagtaaacataagagatcagacctgcaattaagcc 13490172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 24284138 - 24284211
Alignment:
Q  161 aacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||| |||||||||||| ||||  |||||| ||| || ||||||||||||  |||| | ||||||||||||||    
T  24284138 aacttaaaacttttaaaacataagggaccaatttgtaacctaaaataaacatgaggggctaaacatgcaattaa 24284211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 29526672 - 29526596
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    |||||||||||||||| |||  ||||  |||||| |||||| |||||||||||| || ||| | ||||||||||||||    
T  29526672 accaacttgaaactttcaaac-ataagggaccaaattgaaaactaaaataaacataaaggatccaacatgcaattaag 29526596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 38573284 - 38573349
Alignment:
Q  171 ttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagc 236  Q
    |||| ||| |||| ||| |||||| ||| |||||||||||| || |||| ||||||||||||||||    
T  38573284 tttttaaacataattgatcaacttaaaaactaaaataaacataaaggacaaaacatgcaattaagc 38573349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 15988556 - 15988596
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaa 198  Q
    |||||||| |||||||||||||||||  |||||||||||||    
T  15988556 accaacttaaaacttttaaaatataagggaccaacttgaaa 15988596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 36122064 - 36122108
Alignment:
Q  190 aacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||| |||| ||||||  ||||||||||||||||||||||    
T  36122064 aacttgaaacctaatataaacgtaagggaccaaacatgcaattaa 36122108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 43531977 - 43531929
Alignment:
Q  186 gaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||||||| |||||||||||  |||||||| | |||||||||||    
T  43531977 gaccaacttgaaacctaaaataaacgtaagggaccgatcatgcaattaa 43531929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 49983870 - 49983789
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    |||||||| |||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49983870 accaacttcaaacttttaaaacataaaggaccaacttgaaatctaaaataagcacaagggaccaaacatgcaattaagccaa 49983789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 11306589 - 11306668
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||||| ||||  ||||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  11306589 accaacttgaaacttttaaaacataagggaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaagcc 11306668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 17524279 - 17524202
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||| ||||  ||||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  17524279 caacttgaaacttttaaaacataagggaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaagcc 17524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 45505395 - 45505472
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    ||||||||||||||||||||| ||||  ||||||||||||| |||||||||||| |||||| ||||||||||||||||    
T  45505395 accaacttgaaacttttaaaacataagggaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaag 45505472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 235
Target Start/End: Complemental strand, 20269070 - 20268894
Alignment:
Q  68 taaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatgtgagtaac-------- 159  Q
    |||||||||||||||||||||  |||||||||| | || |||||| ||| | ||||| || ||||| |||||||||||  ||||||||||||            
T  20269070 taaataagttaaatttcatcactcatattgtcaacccggatctttaaac-gacaagttatggaagagactaacttatttcaatgtgagtaacgttttgaa 20268972  T
Q  160 -caacttgaaacttttaaaat-ataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
     |||||||||||||||||||  ||||  ||||||||| |||||||||||||||| | |  ||||||||||||||||||    
T  20268971 ccaacttgaaacttttaaaaacataagggaccaacttaaaatctaaaataaacatacgaaaccaaacatgcaattaag 20268894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 24672029 - 24671952
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    ||||||||||||||||||||| |||||||| |||||| |||||||||||||||  ||||||||||| || ||||||||    
T  24672029 accaacttgaaacttttaaaacataaatgatcaacttaaaatctaaaataaacttaagggaccaaatatacaattaag 24671952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 18415022 - 18415102
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcca 238  Q
    ||||||||||||||||||||| || || || |||||||||| |||||||||||| |||||| ||||||| |||||||||||    
T  18415022 accaacttgaaacttttaaaacatgaaggatcaacttgaaaactaaaataaacataagggatcaaacatacaattaagcca 18415102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 31143733 - 31143813
Alignment:
Q  157 aaccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||| |||||||||||| ||||  || |||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  31143733 aaccaacttaaaacttttaaaacataagggatcaacatgaaacctaaaataaacaccagggaccaaacatgcaattaagcc 31143813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 48658368 - 48658447
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||| ||||||||||||||| ||||||||| || ||| |||||||||||| |||| | ||||||||||||||||||    
T  48658368 accaacttaaaacttttaaaatatgaatgaccaatttaaaaactaaaataaacaaaaggaatcaaacatgcaattaagcc 48658447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 49984134 - 49984213
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||||| ||||   |||||| ||||| |||||||||||| |||||| ||||||||||||||||||    
T  49984134 accaacttgaaacttttaaaacataaggaaccaacatgaaacctaaaataaacataagggatcaaacatgcaattaagcc 49984213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 4592691 - 4592765
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaatt 232  Q
    |||||||| |||||||||||| ||||  ||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  4592691 accaacttaaaacttttaaaacataagagaccaacttaaaacctaaaataaacataagggaccaaacatgcaatt 4592765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 17524541 - 17524618
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||| |||||  |||||||||||| |||||||||||  ||| || ||||||||||||||||||    
T  17524541 caacttgaaacttttaaaaaataaagtaccaacttgaaaactaaaataaacgtaagagatcaaacatgcaattaagcc 17524618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 31141742 - 31141677
Alignment:
Q  172 tttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||| ||||||||||||||||||| |||| ||||||| | |||||||||||||||||||||||    
T  31141742 tttaaaacataaatgaccaacttgaaacctaagataaacatacgggaccaaacatgcaattaagcc 31141677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 43913471 - 43913394
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    ||||| || |||||||||||||||||  ||||||||| ||| |||||||||||| |||||| ||||||||||||||||    
T  43913471 accaatttaaaacttttaaaatataagggaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaag 43913394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 45505137 - 45505057
Alignment:
Q  157 aaccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||| |||||||||||||| || | | |||||||| ||| |||||||||||| |||||| ||||||||||||||||||    
T  45505137 aaccaacatgaaacttttaaaacattagtaaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaagcc 45505057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 45170851 - 45170930
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||| |||||||||||| || || |||||| || ||| |||||||||||| |||||| ||||||||||||||||||    
T  45170851 accaacttaaaacttttaaaacatgaaggaccaatttaaaaactaaaataaacataagggatcaaacatgcaattaagcc 45170930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 54702197 - 54702288
Alignment:
Q  68 taaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatgtgagtaac 159  Q
    |||||||||| |||||||||||||||||||||| | ||||||| | ||| || ||||||  ||||| ||| ||||||| |||||||||||||    
T  54702197 taaataagttgaatttcatcatccatattgtcaacccgaatctctaaacggttaagtgacggaagagactgacttattctaatgtgagtaac 54702288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 4416553 - 4416472
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    ||||||||||||||||||||| ||||  || |||||| ||| ||||||||||   |||||| ||||||||||||||||||||    
T  4416553 accaacttgaaacttttaaaacataagggatcaacttaaaaactaaaataaatgtaagggatcaaacatgcaattaagccaa 4416472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 20871137 - 20871216
Alignment:
Q  157 aaccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||||||||||||||||| ||||| ||||||| | ||| |||||||||||| ||||||  |||| ||||||||||||    
T  20871137 aaccaacttgaaacttttaaaacataaaggaccaac-taaaaactaaaataaacataagggatgaaacgtgcaattaagcc 20871216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 48845789 - 48845709
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcca 238  Q
    ||||||||||||||||||||| ||||  | |||||||  || |||||||||||| ||| || |||||||||||||||||||    
T  48845789 accaacttgaaacttttaaaacataaggggccaacttataaactaaaataaacataagagatcaaacatgcaattaagcca 48845709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 12292966 - 12292892
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaatt 232  Q
    ||||||||||||||||||||| | ||  ||||||||| ||| |||||||||||| ||||||  ||||||||||||    
T  12292966 accaacttgaaacttttaaaacaaaagggaccaactttaaacctaaaataaacataagggattaaacatgcaatt 12292892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 236
Target Start/End: Original strand, 37724731 - 37724809
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagc 236  Q
    |||||||||||||||||||||  |||  || |||||| ||| |||||||||||| ||| || |||||||||||||||||    
T  37724731 accaacttgaaacttttaaaacctaagggatcaacttaaaaactaaaataaacataagagatcaaacatgcaattaagc 37724809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 48846049 - 48846126
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    |||| ||| |||||||||||| ||||  ||||||||| |||  ||||||||||| |||||| ||||||||||||||||    
T  48846049 accatcttaaaacttttaaaacataagggaccaacttaaaaagtaaaataaacataagggatcaaacatgcaattaag 48846126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 52485420 - 52485343
Alignment:
Q  157 aaccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||| |||||||||||| ||||  || |||||| ||| |||||||||||| || ||| |||||||||||||||    
T  52485420 aaccaacttaaaacttttaaaacataagggatcaacttaaaaactaaaataaacataatggatcaaacatgcaattaa 52485343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 4416813 - 4416889
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||| ||| |||||||| ||||  ||||||||| ||| |||||||||||| ||| || |||||||||||||||    
T  4416813 accaacttaaaatttttaaaacataagggaccaacttaaaaactaaaataaacataagagatcaaacatgcaattaa 4416889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 4592586 - 4592654
Alignment:
Q  91 catattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatgtgagtaac 159  Q
    |||||||||| | |||||||||  || |||||||||||||||| ||||| ||||| |||||||||||||    
T  4592586 catattgtcaacccgaatctttacacggtcaagtgatagaagagactaatttattctaatgtgagtaac 4592654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 36752936 - 36752860
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||||||||||||||| || || |||||| || |||  ||||||||||| |||||| |||||||||| ||||    
T  36752936 accaacttgaaacttttaaaacatgaaggaccaatttaaaaattaaaataaacataagggatcaaacatgcatttaa 36752860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 37724516 - 37724437
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||||  || || |||||| || ||| |||||||||||| ||| || || |||||||||||||||    
T  37724516 accaacttgaaacttttaaatcatgaaggaccaatttaaaaactaaaataaacataagagatcatacatgcaattaagcc 37724437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 236
Target Start/End: Complemental strand, 20870876 - 20870799
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagc 236  Q
    |||||||||||||||||||||| |||  ||| |||||| || |||||||||||| |||| | | |||||||||||||||    
T  20870876 accaacttgaaacttttaaaatgtaagggacgaacttggaaactaaaataaacataaggaatc-aacatgcaattaagc 20870799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 38916961 - 38917035
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaatt 232  Q
    ||||| ||||||||||| |||  || |||||||||| |||| |||||||| ||| |||||||||||| |||||||    
T  38916961 accaatttgaaactttttaaacttagatgaccaactcgaaacctaaaatatacataagggaccaaacgtgcaatt 38917035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 18414799 - 18414739
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaaggga 218  Q
    ||||||||||||||||||||| ||||  ||||||||| |||  ||||||||||| ||||||    
T  18414799 accaacttgaaacttttaaaacataagggaccaacttaaaaattaaaataaacataaggga 18414739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 5665778 - 5665857
Alignment:
Q  157 aaccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagc 236  Q
    |||||| |||||| | |||||| ||||  ||| ||||||||| |||||||||||| ||| || || ||||||||||||||    
T  5665778 aaccaagttgaaattgttaaaacataagggacaaacttgaaacctaaaataaacataagagatcagacatgcaattaagc 5665857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 12293233 - 12293312
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||| |||  ||||||| |||| |||||||| | |||| ||||||||| | ||||| | |||||||||||||||||    
T  12293233 accaacttaaaatgtttaaaacataagtgaccaacctaaaatttaaaataaatataaggggctaaacatgcaattaagcc 12293312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 52485681 - 52485755
Alignment:
Q  162 acttgaaacttttaaaatataaatgaccaactt-gaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    |||| |||||||||||||||||  |||||||||  ||| |||||||||||| ||  || ||||||||||||||||    
T  52485681 acttaaaacttttaaaatataagggaccaacttaaaaaactaaaataaacataaaagatcaaacatgcaattaag 52485755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 16399251 - 16399304
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaaca 211  Q
    |||||||| ||| |||||||| ||||| |||||| || ||||||||||||||||    
T  16399251 accaacttaaaaattttaaaacataaaggaccaatttaaaatctaaaataaaca 16399304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 45170732 - 45170679
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaaca 211  Q
    |||||||||||||||||||||  |||  ||||||||| ||| ||||||||||||    
T  45170732 accaacttgaaacttttaaaacctaagggaccaacttaaaaactaaaataaaca 45170679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 46397383 - 46397306
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    ||||||||||||||||||||| || |  || ||||| |||| |||||||||| | |  ||| ||||||||||||||||    
T  46397383 accaacttgaaacttttaaaacatgagggatcaactcgaaacctaaaataaatatataggatcaaacatgcaattaag 46397306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 4416582 - 4416542
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaa 198  Q
    |||||||||||||||||||||  |||| |||||||||||||    
T  4416582 accaacttgaaacttttaaaacgtaaaggaccaacttgaaa 4416542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 5688729 - 5688809
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcca 238  Q
    |||||||| ||| |||||||| ||||  || |||||| |||  |||| ||||||  |||||||||||||| ||||||||||    
T  5688729 accaacttaaaatttttaaaacataagagagcaacttaaaacttaaagtaaacattagggaccaaacatgaaattaagcca 5688809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 237
Target Start/End: Complemental strand, 7535483 - 7535298
Alignment:
Q  52 tttaaagctgctttcctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatg 151  Q
    |||||| ||| ||| ||||||||||||||||| ||||  |||||||||| || |||||||| |||  |||||||||| ||||||||||||||||  ||||    
T  7535483 tttaaaactgattttctaaataagttaaattttatcaatcatattgtcaacttgaatctttaaacgatcaagtgataaaagaaactaacttattccaatg 7535384  T
Q  152 tgagtaaccaacttgaaac-ttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||| |   ||||| |   |||||| ||||| ||||||||| |||  ||||||||||| ||| |||||||||||||||||||||    
T  7535383 tgagtaa-cgttttgaaccaacttaaaacataaaagaccaacttaaaacgtaaaataaacataagagaccaaacatgcaattaagcc 7535298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 18429519 - 18429438
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||||||||||| ||| || ||||||||||||||||||||    
T  18429519 accaacttgaaacttttaaaatataagggaccaacttgaaaactaaaataaacataagagatcaaacatgcaattaagccaa 18429438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 4623441 - 4623517
Alignment:
Q  163 cttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    |||||||||||||||| ||||| || |||||||||| |||||||||||| |||||| ||||||||||||||||||||    
T  4623441 cttgaaacttttaaaacataaaggatcaacttgaaaactaaaataaacataagggatcaaacatgcaattaagccaa 4623517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 9710293 - 9710216
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    ||||||||||||||||||||| ||||  ||||||||| ||| |||||||||||| |||||| ||||||||||||||||    
T  9710293 accaacttgaaacttttaaaacataagggaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaag 9710216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 18935384 - 18935457
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaat 231  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| |||||||||||| |||||||||||||||||||    
T  18935384 accaacttgaaacttttaaaacataagggaccaacatgaaacctaaaataaacataagggaccaaacatgcaat 18935457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 7645121 - 7645196
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    ||||||||||||||||||||||||| ||| ||||| ||| |||||||||||| |||||| ||||||||| ||||||    
T  7645121 caacttgaaacttttaaaatataaaggactaacttaaaaactaaaataaacataagggatcaaacatgcgattaag 7645196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 34439559 - 34439638
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||||| || || |||||| || ||| |||||||||||| |||||| ||||||||||||||||||    
T  34439559 accaacttgaaacttttaaaacatgaaggaccaatttaaaaactaaaataaacataagggatcaaacatgcaattaagcc 34439638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 16049815 - 16049889
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||| |||||||||||| ||||  ||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  16049815 caacttaaaacttttaaaacataagggaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaa 16049889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 7644854 - 7644778
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||| ||||  ||||||||| ||| |||||||||||| || ||| ||||||||||||||||||    
T  7644854 caacttgaaacttttaaaacataagggaccaacttaaaaactaaaataaacataa-ggatcaaacatgcaattaagcc 7644778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 18548616 - 18548539
Alignment:
Q  157 aaccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||| |||||||||||| |||||  |||||||| ||| |||||||||||| |||| | |||||||||||||||    
T  18548616 aaccaacttaaaacttttaaaacataaagtaccaacttaaaacctaaaataaacataaggaatcaaacatgcaattaa 18548539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 21446053 - 21445985
Alignment:
Q  167 aaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    ||||||||||||  |||  ||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  21446053 aaacttttaaaacgtaagggaccaacttaaaatctaaaataaatataagggaccaaacatgcaattaag 21445985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 34687831 - 34687755
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||||||| |||||||| |||||  |||||||| ||| |||||||||||| |||||  |||||||||||||||    
T  34687831 accaacttgaaatttttaaaacataaagaaccaacttaaaacctaaaataaacataaggggtcaaacatgcaattaa 34687755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 3016019 - 3016093
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||||||||| ||| ||    ||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  3016019 caacttgaaactttttaaagatgggggaccaacttgaaacctaaaataaacttaagggaccaaacatgcaattaa 3016093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 4623146 - 4623069
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    |||||||| |||||||||||| ||||  || ||| || ||| |||||||||||| |||||| ||||||||||||||||    
T  4623146 accaacttaaaacttttaaaacataagggatcaatttaaaaactaaaataaacataagggatcaaacatgcaattaag 4623069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 18429659 - 18429737
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||| |||||||||||| || || |||||| |||||| || ||||||||| |||||| |||||||| |||||||||    
T  18429659 accaactttaaacttttaaaacatgaaagaccaatttgaaaact-aaataaacataagggatcaaacatgaaattaagcc 18429737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 18548878 - 18548937
Alignment:
Q  167 aaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacat 226  Q
    |||||||||||||||||  ||||||||| ||| |||||||||||||| || |||||||||    
T  18548878 aaacttttaaaatataagagaccaacttaaaacctaaaataaacacagggaaccaaacat 18548937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 18935130 - 18935051
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||| ||| |||||||| | ||  ||||||||| |||  ||||||||||| ||| |||||||||||||||||||||    
T  18935130 accaacttaaaagttttaaaacaaaagggaccaacttaaaacttaaaataaacataagagaccaaacatgcaattaagcc 18935051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 25879860 - 25879901
Alignment:
Q  157 aaccaacttgaaacttttaaaatataaatgaccaacttgaaa 198  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  25879860 aaccaacttgaaacttttaaaatataagggaccaacttgaaa 25879901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 4623378 - 4623418
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaa 198  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  4623378 accaacttgaaacttttaaaacataagtgaccaacttgaaa 4623418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 7535589 - 7535665
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||||| ||||||||| ||||  | ||||||||||| | |||||||| | |||| | |||||||||||||||    
T  7535589 accaacttgaatcttttaaaacataaggggccaacttgaaaccaaaaataaatataaggaatcaaacatgcaattaa 7535665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 16049672 - 16049731
Alignment:
Q  52 tttaaagctgctttcctaaataagttaaatttcatcatccatattgtcagctcgaatctt 111  Q
    |||||| ||| ||| ||||||||||||| || ||||||||||||||||| | ||||||||    
T  16049672 tttaaaactggttttctaaataagttaagttccatcatccatattgtcaacccgaatctt 16049731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 34439299 - 34439220
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||| |||||||||  |||   |||||||| ||| |||||||||||| ||| || ||||||| ||||||||||    
T  34439299 accaacttgaatcttttaaaacctaacgaaccaacttaaaaactaaaataaacataagagatcaaacatacaattaagcc 34439220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 23871078 - 23870997
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    |||||||||||| |||||| | ||||  ||| |||||||||   |||||||||| ||| ||||||||| |||||||| ||||    
T  23871078 accaacttgaaaattttaatacataagggacaaacttgaaactcaaaataaacataagagaccaaacaagcaattaaaccaa 23870997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 34687860 - 34687819
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaat 199  Q
    ||||||||||||||||||||| ||||  ||||||||||||||    
T  34687860 accaacttgaaacttttaaaacataagggaccaacttgaaat 34687819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 9710322 - 9710282
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaa 198  Q
    |||||||||||||||||||||| |||  |||||||||||||    
T  9710322 accaacttgaaacttttaaaatgtaagggaccaacttgaaa 9710282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 42604707 - 42604628
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  42604707 accaacttgaaacttttaaaatataaagtaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaagcc 42604628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 48171777 - 48171849
Alignment:
Q  163 cttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  48171777 cttgaaacttttaaaacataaaggaccaacttgaaacctaaaataaacataagggaccaaacatgcaattaag 48171849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 143032 - 142941
Alignment:
Q  52 tttaaagctgctttcctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaactta 143  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||| ||| | ||||||||| |||||||||||||||||||  |||||||||    
T  143032 tttaaaactgattttctaaataagttaaatttcatcatccatattttcaacccgaatctttaaacagtcaagtgatagaagggactaactta 142941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 67 - 237
Target Start/End: Complemental strand, 25622785 - 25622606
Alignment:
Q  67 ctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatgtgagtaac------- 159  Q
    ||||||||| |||||| ||||| ||||||||| | | ||| ||||| | | ||||||||| |||||| |||||||||||  ||||||||||||           
T  25622785 ctaaataagataaattccatcacccatattgtaaacccgattctttaaccggtcaagtgagagaagagactaacttattccaatgtgagtaacgttttga 25622686  T
Q  160 --caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
      |||||||||||||| |||| ||||  ||| || |||||| |||||||||||| ||||||| |||||||||||||||||    
T  25622685 accaacttgaaactttcaaaacataagagactaatttgaaacctaaaataaacataagggactaaacatgcaattaagcc 25622606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 48171519 - 48171442
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| |||||||||||| |||||| ||||||||||||||||    
T  48171519 accaacttgaaacttttaaaacataagggaccaacctgaaacctaaaataaacataagggatcaaacatgcaattaag 48171442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 159
Target Start/End: Original strand, 35795523 - 35795615
Alignment:
Q  67 ctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatgtgagtaac 159  Q
    ||||||||||||||||||||||  ||| |||||| ||||||||||| ||||  |||||||| ||||| ||||||||||| | |||||||||||    
T  35795523 ctaaataagttaaatttcatcactcatgttgtcaactcgaatctttaaacaaccaagtgatggaagagactaacttattcttatgtgagtaac 35795615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 42604965 - 42605045
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcca 238  Q
    |||||||||||||||||||||  |||  | ||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  42604965 accaacttgaaacttttaaaacctaagggtccaacttgaaaactaaaataaacataagggatcaaacatgcaattaagcca 42605045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 33459972 - 33459893
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||||| ||||  ||| ||||||||| |||||||||||| |||||| ||| ||||||||||||||    
T  33459972 accaacttgaaacttttaaaacataagggactaacttgaaaactaaaataaacataagggatcaagcatgcaattaagcc 33459893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 33460223 - 33460302
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    ||||||||||||||||||| ||||  ||||||||||||| |||||||||||| ||| || ||||||||||||||| ||||    
T  33460223 caacttgaaacttttaaaacataagggaccaacttgaaaactaaaataaacataagagatcaaacatgcaattaaaccaa 33460302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 37245712 - 37245637
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    ||||||||||||||||||||||||  ||||||||| ||| |||||||||||| |||||| |||| |||||||||||    
T  37245712 caacttgaaacttttaaaatataagagaccaacttaaaaactaaaataaacataagggatcaaatatgcaattaag 37245637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 8718535 - 8718611
Alignment:
Q  161 aacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||||||||||||| ||||  ||||||||| ||| |||||||||||| | |||| ||||||||||||||||||    
T  8718535 aacttgaaacttttaaaaaataagggaccaacttaaaacctaaaataaacatatgggatcaaacatgcaattaagcc 8718611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 31872785 - 31872709
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||||||||||||||||  |||  ||||||||| ||| |||||||||||| |||||| |||||||||||||||    
T  31872785 accaacttgaaacttttaaaacgtaagggaccaactttaaaactaaaataaacataagggatcaaacatgcaattaa 31872709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 31872935 - 31873014
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcca 238  Q
    ||||||||||||||||||||| |||   ||||||||||||| |||||||||||| |||||| |||| ||||||||||||||    
T  31872935 accaacttgaaacttttaaaacatagg-gaccaacttgaaaactaaaataaacataagggatcaaatatgcaattaagcca 31873014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 19987411 - 19987332
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||| |||||||||||| ||||| || |||||| ||| |||||||||||| | |||| ||||||||||||||||||    
T  19987411 accaacttaaaacttttaaaacataaaggaacaacttaaaaactaaaataaacatatgggatcaaacatgcaattaagcc 19987332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 35795390 - 35795311
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||| |||||||||||||   ||  |||||||||||||||||||||||||| ||| || ||||||||||||||||||    
T  35795390 accaactcgaaacttttaaaactcaagggaccaacttgaaatctaaaataaacataagagatcaaacatgcaattaagcc 35795311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 36783415 - 36783489
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||||| |||||||| ||||| ||||||||| ||||||||||| |||| ||| |||||||||| |||||||    
T  36783415 caacttgaaatttttaaaacataaaagaccaacttaaaatctaaaatgaacataagagaccaaacatacaattaa 36783489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 35795652 - 35795729
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    ||||| || |||||||||||| || |  ||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  35795652 accaatttaaaacttttaaaacatcagggaccaacttaaaatctaaaataaacataaaggaccaaacatgcaattaag 35795729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 3073055 - 3072979
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||| |||||||||||| | ||  ||||||||| |||||||||||||||| || ||| |||||||||||||||    
T  3073055 accaacttaaaacttttaaaacacaagggaccaacttaaaatctaaaataaacataaaggatcaaacatgcaattaa 3072979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 8718457 - 8718405
Alignment:
Q  185 tgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  8718457 tgaccaacttaaaacctaaaataaacacaagagaccaaacatgcaattaagcc 8718405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 13189230 - 13189150
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcca 238  Q
    |||||||| |||||||||||||||||  ||||||||  ||| ||||||||||||| ||| |||||||||| | ||||||||    
T  13189230 accaacttaaaacttttaaaatataagggaccaactgaaaacctaaaataaacactaggaaccaaacatgtagttaagcca 13189150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 34518290 - 34518358
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacat 226  Q
    ||||| || |||||||||||||||||| ||||||||| ||| |||||||||||| |||||| |||||||    
T  34518290 accaatttaaaacttttaaaatataaaggaccaacttaaaaactaaaataaacataagggatcaaacat 34518358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 18519627 - 18519701
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||||||||||||||  ||   ||||||||||||| |||||||||||| ||| || |||||||||||||||    
T  18519627 caacttgaaacttttaaaacgtatgagaccaacttgaaaactaaaataaacataagagatcaaacatgcaattaa 18519701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 34518035 - 34517965
Alignment:
Q  164 ttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||| |||||| ||||  ||||||||| ||| |||||||||||| |||||| |||||||||||||||    
T  34518035 ttgaaactgttaaaacataatggaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaa 34517965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 142888 - 142811
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    |||||||||||| |||||||| | ||  ||||||||| ||| |||||||| ||| ||||||| |||||||||||||||    
T  142888 accaacttgaaaattttaaaacacaagggaccaacttaaaacctaaaatacacataagggacaaaacatgcaattaag 142811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 143149 - 143226
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    |||||||| |||||||||||  ||| | ||||||||| ||| |||||||||||| |||||| ||||||| ||||||||    
T  143149 accaacttaaaacttttaaagcatataggaccaacttaaaacctaaaataaacataagggatcaaacatacaattaag 143226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 37245932 - 37245985
Alignment:
Q  186 gaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    ||||||||| ||| |||||||||||| |||||| ||||||||||||||||||||    
T  37245932 gaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaagccaa 37245985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 22792613 - 22792689
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||| ||||||||||||  |||  ||||||||| ||| |||||||||||| | |||||||||||| |||||||    
T  22792613 accaacttaaaacttttaaaacttaagggaccaacttaaaacctaaaataaacatatgggaccaaacatacaattaa 22792689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 6043519 - 6043445
Alignment:
Q  161 aacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcca 238  Q
    |||||||||| ||||||||||||  ||   |||| ||| |||||||||| | ||||||||||||||||||||||||||    
T  6043519 aacttgaaacatttaaaatataatgga---acttaaaacctaaaataaatataagggaccaaacatgcaattaagcca 6043445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 14420118 - 14420192
Alignment:
Q  161 aacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    |||||||||||||||||| ||||  ||| || || ||| |||||||||||| |||| | ||||||||||||||||    
T  14420118 aacttgaaacttttaaaacataatagactaatttaaaacctaaaataaacataaggaatcaaacatgcaattaag 14420192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 18519394 - 18519313
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    |||||||| |||| ||||||| ||||  ||||||||| ||| |||||||||||| |||| |   ||||||||||||||||||    
T  18519394 accaacttaaaacatttaaaacataagggaccaacttaaaaactaaaataaacataaggtattgaacatgcaattaagccaa 18519313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 22792367 - 22792290
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    |||||||| |||||||||||| | ||  ||||||||| |||  ||||||||||| | ||||||||| |||||||||||    
T  22792367 accaacttaaaacttttaaaacaaaagggaccaacttaaaacttaaaataaacatatgggaccaaatatgcaattaag 22792290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 159
Target Start/End: Original strand, 34518147 - 34518253
Alignment:
Q  52 tttaaagctgctttcctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatg 151  Q
    |||||| ||| ||| ||||||||||||| |||||||| ||||||||||| | ||||| ||| |||| | ||||||  | ||  ||||||||||| ||| |    
T  34518147 tttaaaactgattttctaaataagttaagtttcatcacccatattgtcaacccgaatatttaaaca-ttaagtgaatggagggactaacttattctaacg 34518245  T
Q  152 tgagtaac 159  Q
    ||||||||    
T  34518246 tgagtaac 34518253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 14419887 - 14419821
Alignment:
Q  168 aacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||||| ||||  ||||||||| ||| |||||||||||| |||| || ||| ||||||||||    
T  14419887 aacttttaaaacataagggaccaacttaaaacctaaaataaacataaggaactaaagatgcaattaa 14419821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 30972058 - 30972091
Alignment:
Q  67 ctaaataagttaaatttcatcatccatattgtca 100  Q
    |||||||||||||||||||||| |||||||||||    
T  30972058 ctaaataagttaaatttcatcaaccatattgtca 30972091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 19987539 - 19987448
Alignment:
Q  67 ctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatgtgagtaac 159  Q
    |||||||||||||||||||||| |||||| |||  | ||||||||| ||| || || |||  ||||  |||||||||||  ||||||||||||    
T  19987539 ctaaataagttaaatttcatcacccatatagtcgacccgaatctttaaac-gttaaatgactgaagggactaacttattccaatgtgagtaac 19987448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 19987698 - 19987746
Alignment:
Q  187 accaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    |||||||||||| |||||||||||| || |||  |||||||||||||||    
T  19987698 accaacttgaaaactaaaataaacataaaggattaaacatgcaattaag 19987746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 22792496 - 22792404
Alignment:
Q  67 ctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatgtgagtaac 159  Q
    |||||||||||||||| ||||| ||||||||||| |  ||| |||| ||| | |||||||  ||||  |||||||||||  ||| ||||||||    
T  22792496 ctaaataagttaaattccatcacccatattgtcaacctgaaactttaaacggccaagtgacggaaggtactaacttatttcaatatgagtaac 22792404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 33460001 - 33459961
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaa 198  Q
    |||||||||||||||||||||  |||| |||||||||||||    
T  33460001 accaacttgaaacttttaaaacgtaaaggaccaacttgaaa 33459961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0548 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 3367 - 3446
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||||| ||||  ||||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  3367 accaacttgaaacttttaaaacataagggaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaagcc 3446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 7460877 - 7460953
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||| ||||||||||||||| |||| |||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  7460877 accaatttgaaacttttaaaacataagtgaccaacttgaaaactaaaataaacataagggatcaaacatgcaattaa 7460953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 22566380 - 22566301
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||||| ||||  |||||| || ||| |||||||||||| |||||| ||||||||||||||||||    
T  22566380 accaacttgaaacttttaaaacataagggaccaatttaaaaactaaaataaacataagggatcaaacatgcaattaagcc 22566301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 24185737 - 24185670
Alignment:
Q  167 aaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  24185737 aaacttttaaaacataaaggaccaacttgaaacctaaaataaacacgagtgaccaaacatgcaattaa 24185670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 24188204 - 24188286
Alignment:
Q  157 aaccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    ||||||||||||||| |||||| ||||  ||||||||||||| |||| ||||||| ||| || ||||||||||||||||||||    
T  24188204 aaccaacttgaaactcttaaaacataagggaccaacttgaaacctaatataaacataagcgatcaaacatgcaattaagccaa 24188286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 17814053 - 17813974
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||| ||||||||||||||| ||||  ||||||||||||| |||||||||||| ||| || |||||||| |||||||||    
T  17814053 accaatttgaaacttttaaaacataagagaccaacttgaaacctaaaataaacataagagatcaaacatggaattaagcc 17813974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 7460648 - 7460572
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||||||| |||||||| ||||  || |||||||||| |||||||||||| |||||| |||||||| ||||||    
T  7460648 accaacttgaaatttttaaaacataagggatcaacttgaaaactaaaataaacataagggatcaaacatgaaattaa 7460572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 34536019 - 34536095
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||| ||||||||||||| |||  ||||||||| ||| |||| ||||||| |||||| |||||||||||||||    
T  34536019 accaacttaaaacttttaaaatgtaagggaccaacttaaaaactaagataaacataagggatcaaacatgcaattaa 34536095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 6376443 - 6376375
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacat 226  Q
    |||||||| |||||||||||| |||||  |||||||| ||| |||||||||||| || |||||||||||    
T  6376443 accaacttaaaacttttaaaacataaagaaccaacttaaaacctaaaataaacataaaggaccaaacat 6376375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 6376707 - 6376771
Alignment:
Q  170 cttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||| ||||||||||||||| ||| |||||||||||| || ||| ||||| |||||||||    
T  6376707 cttttaaaacataaatgaccaacttaaaacctaaaataaacataacggatcaaacttgcaattaa 6376771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 10017938 - 10018005
Alignment:
Q  167 aaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||||||| ||||  ||||||||| ||| |||||||||||| ||| |||||||||| |||||||    
T  10017938 aaacttttaaaacataagagaccaacttaaaacctaaaataaacataagagaccaaacatacaattaa 10018005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 36469870 - 36469948
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||| |||||||||||| |  || |||||| |||||| |||||||||||| ||| || ||||||||||||||||||    
T  36469870 accaacttaaaacttttaaaacacgaaggaccaatttgaaa-ctaaaataaacataagagatcaaacatgcaattaagcc 36469948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 34535768 - 34535695
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||| |||||||||||||||| | |   ||||||||| ||| |||||||||||| |||||| |||||||||||||||    
T  34535768 accagcttgaaacttttaaaacaga---gaccaacttaaaaactaaaataaacataagggatcaaacatgcaattaa 34535695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 48462128 - 48462205
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaat-aaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||||||||||||||| ||||  ||||||||| ||| ||||||| ||||| ||| || |||||||| ||||||    
T  48462128 accaacttgaaacttttaaaacataagggaccaacttaaaaactaaaataaaacataagagatcaaacatgtaattaa 48462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 43511188 - 43511267
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    ||||||||||||||||||| ||||| || || ||| |||  ||||||||||| ||| || ||||||| ||||||| ||||    
T  43511188 caacttgaaacttttaaaacataaaagatcatcttaaaacttaaaataaacataagagatcaaacatacaattaaaccaa 43511267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 198
Target Start/End: Original strand, 48462101 - 48462139
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaa 198  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  48462101 caacttaaaacttttaaaacataaatgaccaacttgaaa 48462139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 48461869 - 48461793
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    |||||||| |||||||||||| ||||| || |||||| ||| |||||| ||||| ||| || | ||||||||||||||    
T  48461869 accaacttaaaacttttaaaacataaaggatcaacttaaaaactaaaacaaacataagagatc-aacatgcaattaag 48461793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 6376572 - 6376484
Alignment:
Q  67 ctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatgtgag 155  Q
    |||||||||||||||||||||| ||| |||| || |   ||||||| ||| | ||||||| | |||| |||||||||||  ||||||||    
T  6376572 ctaaataagttaaatttcatcacccacattgccaaccaaaatctttaaacggacaagtgacaaaagagactaacttattcaaatgtgag 6376484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 15999233 - 15999185
Alignment:
Q  186 gaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||||||||||||||||||| | ||| | ||||||||||| ||||    
T  15999233 gaccaacttgaaatctaaaataaaaataagagtccaaacatgcagttaa 15999185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 234
Target Start/End: Original strand, 16642952 - 16643128
Alignment:
Q  67 ctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatgtgagtaac------- 159  Q
    |||||||||||||||||||||| | || |||||| | | ||||||| ||| |||||||||  ||||| |||||||||||  ||| ||||||||           
T  16642952 ctaaataagttaaatttcatcaccgatgttgtcaacccaaatctttaaacggtcaagtgacggaagagactaacttatttcaatctgagtaacatttaga 16643051  T
Q  160 --caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
      ||||||||||||||||||||||||| ||||||| | ||| |||||||| ||  ||| |||||||||| |||||||    
T  16643052 agcaacttgaaacttttaaaatataaaggaccaacataaaacctaaaatacacgtaagagaccaaacatacaattaa 16643128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 33992670 - 33992750
Alignment:
Q  157 aaccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||| || |||||||||||| ||||| |||||| || ||| |||||||||||| |||||| ||||||||||||||||||    
T  33992670 aaccaatttaaaacttttaaaacataaaggaccaatttaaaaactaaaataaacataagggatcaaacatgcaattaagcc 33992750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 19328472 - 19328404
Alignment:
Q  171 ttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    |||||||||||||| ||||||||| ||| |||||||||||| |||||| ||| ||||||||||| ||||    
T  19328472 ttttaaaatataaaggaccaacttaaaaactaaaataaacataagggatcaatcatgcaattaaaccaa 19328404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 33992412 - 33992333
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||| || |||||| ||||| ||||  ||| ||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  33992412 accaatttaaaacttataaaacataagggacgaacttgaaaactaaaataaacataagggatcaaacatgcaattaagcc 33992333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 25508143 - 25508216
Alignment:
Q  161 aacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||||||||||||| ||||  || |||||| ||| ||||||| |||  ||||||||||||||||||||||    
T  25508143 aacttgaaacttttaaaacataagggagcaacttaaaacctaaaatcaacttaagggaccaaacatgcaattaa 25508216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 41563824 - 41563743
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    |||||||| ||||||||||||||||   ||| ||||| | |||||||||||||| || | ||||||||||||||||| ||||    
T  41563824 accaacttaaaacttttaaaatatatgagactaacttaagatctaaaataaacataaagaaccaaacatgcaattaaaccaa 41563743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 16642827 - 16642751
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||||||  ||||||| ||||  ||||||||| ||| |||||||||||| |||||| ||||| |||||||||    
T  16642827 accaacttgaaatatttaaaacataagggaccaacttaaaacctaaaataaacataagggatcaaacttgcaattaa 16642751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 19935511 - 19935432
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||||||| || ||||| ||||  ||||||||| ||| | |||||||||| ||| |||| ||||||||||||||||    
T  19935511 accaacttgaaatttataaaacataatggaccaacttaaaaccaaaaataaacataagagacccaacatgcaattaagcc 19935432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 18697567 - 18697490
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||| || |||||||| |||||  ||||||| |||||| |||||||| || |||| | ||||||||||||||||||    
T  18697567 caacttaaatcttttaaagtataagagaccaacatgaaatttaaaataagcataaggaatcaaacatgcaattaagcc 18697490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 63059 - 63140
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    ||||||||||||||||||||| || || |||||| || ||| |||||||||||| |||||| ||||||||||||||||||||    
T  63059 accaacttgaaacttttaaaacatgaaggaccaatttaaaaactaaaataaacataagggatcaaacatgcaattaagccaa 63140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 62800 - 62724
Alignment:
Q  161 aacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||||||||||||| |||   |||||||||||||  | ||||||| | |||||| ||| ||||||||||||||    
T  62800 aacttgaaacttttaaaacatacgagaccaacttgaaaattgaaataaatataagggatcaagcatgcaattaagcc 62724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 47417 - 47490
Alignment:
Q  164 ttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||| ||||  ||||||||| ||| |||||||||||| |||||||||||||||||||||||||    
T  47417 ttgaaacttttaaaacataagcgaccaacttaaaacctaaaataaacataagggaccaaacatgcaattaagcc 47490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 47339 - 47291
Alignment:
Q  186 gaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||||||||||||||||||||  || || |||||||||||||||    
T  47339 gaccaacttgaaatctaaaataaacattagagatcaaacatgcaattaa 47291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 22793378 - 22793298
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcca 238  Q
    ||||||||||||||||||||| ||||  ||||||||||||| |||||||||||| ||||| ||||| || |||||||||||    
T  22793378 accaacttgaaacttttaaaacataagggaccaacttgaaacctaaaataaacataaggggccaaatatccaattaagcca 22793298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 22793606 - 22793679
Alignment:
Q  161 aacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||||||||||||||||  |||  ||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  22793606 aacttgaaacttttaaaacgtaagggaccaacttgaaacctaaaataaacataagggatcaaacatgcaattaa 22793679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 29674926 - 29674857
Alignment:
Q  157 aaccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacat 226  Q
    |||||||||||||||||||||||||||  ||||||||||||| ||||| |||||| |||||| |||||||    
T  29674926 aaccaacttgaaacttttaaaatataagggaccaacttgaaacctaaattaaacataagggatcaaacat 29674857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 11122239 - 11122315
Alignment:
Q  161 aacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||| |||||||||||| |||||||||||||||  || |||||||||||| |||||| ||||||| ||||||||||    
T  11122239 aacttcaaacttttaaaacataaatgaccaacttacaacctaaaataaacataagggatcaaacatacaattaagcc 11122315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 17342965 - 17342885
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcca 238  Q
    |||||||||||| |||||||| ||||  ||||||||||||| |||||||||||| | ||||  ||||||||||||||||||    
T  17342965 accaacttgaaatttttaaaacataagggaccaacttgaaacctaaaataaacatacgggattaaacatgcaattaagcca 17342885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 6209907 - 6209842
Alignment:
Q  161 aacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacat 226  Q
    |||||||||||||||||| ||||||||| || |||||| |||||||||||  ||||||||||||||    
T  6209907 aacttgaaacttttaaaacataaatgacaaaattgaaacctaaaataaacgtaagggaccaaacat 6209842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 34829891 - 34829968
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    |||||| |||||||||||||| ||||  ||||||||| ||| |||||||||||| ||| || ||||||||||||||||    
T  34829891 accaacatgaaacttttaaaacataagagaccaacttaaaacctaaaataaacataagagatcaaacatgcaattaag 34829968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 234
Target Start/End: Complemental strand, 34829757 - 34829582
Alignment:
Q  67 ctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatgtgagtaa-------- 158  Q
    |||||||||||||||||||||| ||||||||||| | |||| |||| |||| ||| ||||  || |  |||||||||||  |||||||||||            
T  34829757 ctaaataagttaaatttcatcacccatattgtcaacccgaaactttaaacaatcaggtgacgga-gtgactaacttattccaatgtgagtaatgtattga 34829659  T
Q  159 -ccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
     | |||||||||||||||||| |||| | |||||||| |||  ||||||||||| || ||| ||||| |||||||||    
T  34829658 actaacttgaaacttttaaaacataagtaaccaacttaaaacttaaaataaacataaaggatcaaacctgcaattaa 34829582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 6611973 - 6612052
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||||||||||| | ||  || |||||| |||||||||||||||| |||  | ||||||||||||||||||    
T  6611973 accaacttgaaacttttaaaacacaagggatcaacttaaaatctaaaataaacataagacatcaaacatgcaattaagcc 6612052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 10567540 - 10567471
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatg 227  Q
    |||||||||||||||||||||  |||  |||||| |||||| |||||||||||| |||||| ||||||||    
T  10567540 accaacttgaaacttttaaaacgtaagggaccaatttgaaaactaaaataaacataagggatcaaacatg 10567471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 237
Target Start/End: Original strand, 29675061 - 29675256
Alignment:
Q  52 tttaaagctgctttcctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatg 151  Q
    |||||| ||| ||| |||||||||||||||   |||| |||||||||||  | ||| |||| ||| |||||||||  |||| ||||||||||||  ||||    
T  29675061 tttaaaactgattttctaaataagttaaatccaatcacccatattgtcaatttgaaactttaaacggtcaagtgacggaaggaactaacttattccaatg 29675160  T
Q  152 tgagt---------aaccaacttgaaa-cttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||| |         ||||||||| ||| ||||||||| || |  ||||||||| ||| |||||||||||| || | ||||||||| ||||||||||    
T  29675161 tgaataacgttctgaaccaacttaaaatcttttaaaacatgagagaccaacttaaaacctaaaataaacataaagcaccaaacatacaattaagcc 29675256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 10567797 - 10567877
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    |||||||||||||| |||||| || || || ||| ||||||  ||||||||||| |||||| |||| |||||||||||||||    
T  10567797 accaacttgaaactcttaaaacatgaa-gatcaatttgaaaattaaaataaacataagggatcaaatatgcaattaagccaa 10567877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 19279319 - 19279392
Alignment:
Q  161 aacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    ||||| |||||||||||| |||||  || ||||| ||||||||||||||||  | | |||||||||||||||||    
T  19279319 aacttaaaacttttaaaacataaaatactaacttaaaatctaaaataaacattacgaaccaaacatgcaattaa 19279392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 6611688 - 6611636
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaac 210  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| |||||||||||    
T  6611688 accaacttgaaacttttaaaacataagggaccaacctgaaacctaaaataaac 6611636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 32629140 - 32629064
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||| ||| |||||||| ||||| | | ||||| ||| |||||||||||| |||||| |||||||| ||||||    
T  32629140 accaacttaaaatttttaaaacataaaggtctaacttaaaacctaaaataaacataagggatcaaacatgtaattaa 32629064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 28613272 - 28613193
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||  |||||||||||  |||  ||||||||| ||| |||||||||| | |||||| ||||||||||| ||||||    
T  28613272 accaacttacaacttttaaaacgtaagggaccaacttaaaaactaaaataaatataagggatcaaacatgcaactaagcc 28613193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 11121975 - 11121934
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaat 199  Q
    ||||||||||||||||||||||||||  || |||||||||||    
T  11121975 accaacttgaaacttttaaaatataagggatcaacttgaaat 11121934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 32629386 - 32629467
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggacc-aaacatgcaattaagcca 238  Q
    |||||||  |||||||||||| ||||| ||||||||| ||| | |||||||||| |  ||||| ||||||||| ||||||||    
T  32629386 accaactcaaaacttttaaaacataaaagaccaacttaaaaccaaaaataaacagagaggaccaaaacatgcacttaagcca 32629467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 6210285 - 6210361
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||| | |||||||||||| ||||   |||||||| |||||||||||||||| ||| |||  ||||| |||||||    
T  6210285 accaacataaaacttttaaaacataaggcaccaacttaaaatctaaaataaacataagagactgaacatacaattaa 6210361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 6273894 - 6273934
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaa 198  Q
    |||||||||| |||||||||| ||| |||||||||||||||    
T  6273894 accaacttgatacttttaaaacatacatgaccaacttgaaa 6273934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 28613502 - 28613578
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||||||| |||||||| |  || |||||| || |||  ||||||||||| |||||| ||||||| |||||||    
T  28613502 accaacttgaaatttttaaaacaagaaggaccaatttaaaaattaaaataaacataagggatcaaacatacaattaa 28613578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 33419877 - 33419956
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||| |||||||||||||||| ||||  ||||||||| |||  ||||||||||| |||||| ||||||||||||||||||    
T  33419877 accatcttgaaacttttaaaacataagggaccaacttaaaaagtaaaataaacataagggatcaaacatgcaattaagcc 33419956  T

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Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 37285885 - 37285960
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    ||||||||||||||||||||||||  ||||||||| ||| |||||||||||| | || || |||||||||||||||    
T  37285885 caacttgaaacttttaaaatataagggaccaacttaaaacctaaaataaacatagggaactaaacatgcaattaag 37285960  T

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Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 33241924 - 33241846
Alignment:
Q  157 aaccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaag 235  Q
    |||||| || |||||||||||| ||||  || |||||||||| |||||||||||  |||||||||| ||||||||||||    
T  33241924 aaccaaattaaaacttttaaaacataagggaacaacttgaaacctaaaataaacttaagggaccaaccatgcaattaag 33241846  T

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Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 48618558 - 48618478
Alignment:
Q  157 aaccaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||| || |||||||||||| |||||| ||||| || ||| |||||||||||| |||| |||||| ||| |||||||||    
T  48618558 aaccaatttaaaacttttaaaacataaataaccaatttaaaacctaaaataaacataaggaaccaaatatgtaattaagcc 48618478  T

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Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 54341280 - 54341204
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||||| |||||||||||| || || |||||| || ||  |||||||||||| |||||| |||||||||||||||    
T  54341280 accaacttaaaacttttaaaacatgaacgaccaatttaaatactaaaataaacataagggatcaaacatgcaattaa 54341204  T

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Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 19541169 - 19541250
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    ||||||||||||| | ||||| ||||| ||| ||||| ||| | |||||||||| |||  | ||||||||||||||||||||    
T  19541169 accaacttgaaacgtataaaacataaaagactaacttaaaaccaaaaataaacataagatatcaaacatgcaattaagccaa 19541250  T

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Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 19541013 - 19540938
Alignment:
Q  84 catcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatgtgagtaac 159  Q
    ||||| ||||||||||| |  |||||||| ||| ||||||||| | ||  |||||||||||| |||||||||||||    
T  19541013 catcacccatattgtcaacctgaatctttaaacggtcaagtgacaaaatgaactaacttattctaatgtgagtaac 19540938  T

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Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 30547939 - 30547997
Alignment:
Q  67 ctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtga 126  Q
    |||||||||||||||||||||| |||||||||||  | |||||||| ||| |||||||||    
T  30547939 ctaaataagttaaatttcatcacccatattgtca-atagaatctttaaacggtcaagtga 30547997  T

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Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 159
Target Start/End: Complemental strand, 48618701 - 48618594
Alignment:
Q  52 tttaaagctgctttcctaaataagttaaatttcatcatccatattgtcagctcgaatctttcaacagtcaagtgatagaagaaactaacttattataatg 151  Q
    |||||| ||| ||| ||||||||  |||||||||||| ||||||||||  | | ||||||| |||| |||||||| | |||    ||||||||| |||||    
T  48618701 tttaaaactgattttctaaataaagtaaatttcatcacccatattgtcgacccaaatctttaaacaatcaagtgacaaaaggggttaacttattctaatg 48618602  T
Q  152 tgagtaac 159  Q
    ||||||||    
T  48618601 tgagtaac 48618594  T

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Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 48618845 - 48618896
Alignment:
Q  186 gaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||||||||||  |||||||||| | |||||| ||||||||||||||||||    
T  48618845 gaccaacttgaagcctaaaataaatataagggatcaaacatgcaattaagcc 48618896  T

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Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 51388096 - 51388162
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacat 226  Q
    |||||| |||||||||||| ||||  ||||||||| ||| |||||||||||| |||| | |||||||    
T  51388096 caacttaaaacttttaaaacataagagaccaacttaaaaactaaaataaacataaggaatcaaacat 51388162  T

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Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 54111491 - 54111417
Alignment:
Q  160 caacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaa 234  Q
    |||||| |||||||||||| ||||| || |||| | |||| ||||||| | | |||||| |||||||||||||||    
T  54111491 caacttaaaacttttaaaacataaaggatcaacataaaatgtaaaatacatataagggatcaaacatgcaattaa 54111417  T

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Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 30547815 - 30547736
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagccaa 239  Q
    |||||||| |||||||||||| ||||  ||||||| | |||| ||||||||||| ||| || | ||||||||||||||||||    
T  30547815 accaacttaaaacttttaaaacataagcgaccaacctaaaat-taaaataaacataagagatc-aacatgcaattaagccaa 30547736  T

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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 54341438 - 54341511
Alignment:
Q  164 ttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||||||||||||| |||  ||||||||  |||  ||||||||||| ||| || ||||||| ||||||||||    
T  54341438 ttgaaacttttaaaatctaagggaccaactcaaaaattaaaataaacataagagatcaaacatacaattaagcc 54341511  T

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Target: scaffold0400 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 9913 - 9986
Alignment:
Q  163 cttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagc 236  Q
    |||||||||||||||| ||||  ||||||||| ||| |||||||||||| ||| || |||||||||||||||||    
T  9913 cttgaaacttttaaaacataagagaccaacttaaaacctaaaataaacataagagatcaaacatgcaattaagc 9986  T

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Target: scaffold0400; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 9656 - 9577
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||| ||||||||||||||| ||||  ||||| ||| |||  ||||||||||| ||| || |||||||| |||||||||    
T  9656 accaatttgaaacttttaaaacataagggaccatcttaaaaattaaaataaacataagagatcaaacatggaattaagcc 9577  T

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Target: scaffold0365 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 10556 - 10629
Alignment:
Q  163 cttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagc 236  Q
    |||||||||||||||| ||||  ||||||||| ||| |||||||||||| ||| || |||||||||||||||||    
T  10556 cttgaaacttttaaaacataagagaccaacttaaaacctaaaataaacataagagatcaaacatgcaattaagc 10629  T

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Target: scaffold0365; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 10299 - 10220
Alignment:
Q  158 accaacttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    ||||| ||||||||||||||| ||||  ||||| ||| |||  ||||||||||| ||| || |||||||| |||||||||    
T  10299 accaatttgaaacttttaaaacataagggaccatcttaaaaattaaaataaacataagagatcaaacatggaattaagcc 10220  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 29681 - 29608
Alignment:
Q  164 ttgaaacttttaaaatataaatgaccaacttgaaatctaaaataaacacaagggaccaaacatgcaattaagcc 237  Q
    |||||| ||||||||  |||  || |||||||||| |||||||||||| ||| || |||||||| |||||||||    
T  29681 ttgaaatttttaaaacgtaagagatcaacttgaaaactaaaataaacataagagatcaaacatgtaattaagcc 29608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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