View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3827_high_22 (Length: 241)
Name: NF3827_high_22
Description: NF3827
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3827_high_22 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 5370866 - 5371099
Alignment:
| Q |
8 |
gacatcatcacccaagaacaagaacagatggtttccccccagcgttatgaaagttttgatatgtaaccataaatgattaaaattttcaactagtaaagat |
107 |
Q |
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| T |
5370866 |
gacattatcacccaagaacaagaacagatggtttccccccagcgttatgaaagttttgatatgtaaccataaatgattaaaattttcaactagtaaagat |
5370965 |
T |
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| Q |
108 |
tgacaatttaatcttgctatagtaaatatgaagcgataaatatattccattgtttatctatttttcgacaacaacactgccacataaaaacagtaaaaca |
207 |
Q |
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| T |
5370966 |
tgacaatttaatcttgctatagtaaatatgatgcgataaatatattccattgtttatctatttttcgacaacaacactgccacataaaaacagtaaaaca |
5371065 |
T |
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| Q |
208 |
aaccttacacgtccgatcatctgacgctgaagct |
241 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
5371066 |
aaccttacacgtccgatcatctgacgctgaagct |
5371099 |
T |
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