View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3827_low_6 (Length: 476)

Name: NF3827_low_6
Description: NF3827
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3827_low_6
NF3827_low_6
[»] chr5 (2 HSPs)
chr5 (28-458)||(5270431-5270863)
chr5 (161-265)||(29161127-29161231)
[»] chr8 (6 HSPs)
chr8 (162-276)||(30284393-30284507)
chr8 (174-261)||(30051670-30051757)
chr8 (179-273)||(11207434-11207528)
chr8 (219-278)||(35578290-35578349)
chr8 (174-277)||(42869167-42869270)
chr8 (201-241)||(11443406-11443446)
[»] chr4 (4 HSPs)
chr4 (93-245)||(5912587-5912737)
chr4 (158-278)||(24188092-24188211)
chr4 (205-274)||(5958671-5958740)
chr4 (179-267)||(38868019-38868107)
[»] chr7 (3 HSPs)
chr7 (179-275)||(48433161-48433257)
chr7 (174-275)||(48433316-48433417)
chr7 (201-277)||(33008504-33008580)
[»] chr1 (3 HSPs)
chr1 (181-266)||(33580774-33580861)
chr1 (158-276)||(6421573-6421691)
chr1 (160-229)||(6349483-6349552)
[»] chr6 (4 HSPs)
chr6 (179-277)||(7379647-7379745)
chr6 (181-245)||(4433071-4433135)
chr6 (224-275)||(30603465-30603516)
chr6 (180-245)||(32847512-32847577)
[»] chr3 (4 HSPs)
chr3 (93-232)||(52750137-52750277)
chr3 (179-276)||(20505163-20505263)
chr3 (217-274)||(3727278-3727335)
chr3 (191-259)||(32471636-32471704)
[»] chr2 (3 HSPs)
chr2 (179-273)||(15396103-15396196)
chr2 (174-211)||(10953499-10953536)
chr2 (108-141)||(14990878-14990911)


Alignment Details
Target: chr5 (Bit Score: 372; Significance: 0; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 28 - 458
Target Start/End: Original strand, 5270431 - 5270863
Alignment:
Q  28 ttttggatatgaatctcatcttgaatacaataccacaattcactatgatgaatcatgaatccataattcattcaaataaatcactacctaaacttagtgc 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5270431 ttttggatatgaatctcatcttgaatacaataccacaattcactatgatgaatcatgaatccatgattcattcaaataaatcactacctaaacttagtgc 5270530  T
Q  128 agctagccccttttgtcaactttgtataactaaccaaccactattgttttctcatttgatttatgacttgagccttgaattattctgaagttcatatatg 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5270531 agctagccccttttgtcaactttgtataactaaccaaccactattcttttctcatttgatttatgacttgaaccttgaattattctgaagttcatatatg 5270630  T
Q  228 atataccaacttataattctgctttgtcacttgtttttacttaaaaatgttcc-ttttatcagtaatgcatcctaggattcataataagatctgattcac 326  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5270631 atataccaacttataattctgctatgtcacttgtttttacttaaaaatgttcctttttatcagtaatgcatcctaggattcataataagatctgattcac 5270730  T
Q  327 aaattcnnnnnnncaagtcttctaattcataatctaaatctcgatttgataaccatggaaat-gaatacttataaataatgcataaaaatcaagactttg 425  Q
    ||||||       |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  5270731 aaattcaaaaaagcaagtcttctaattcacaatctaaatctcgatttgataacaatggaaatggaatacttataaataatgcataaaaatcaagactttg 5270830  T
Q  426 agtcaaaaacttgaaaattcccatatgtaacac 458  Q
    |||||||||||||||||||||||||||||||||    
T  5270831 agtcaaaaacttgaaaattcccatatgtaacac 5270863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 161 - 265
Target Start/End: Original strand, 29161127 - 29161231
Alignment:
Q  161 ccaaccactattgttttctcatttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcacttg 260  Q
    ||||||||| || |||| ||||||||  |||||| ||| |||||||||||| ||| |||||||||||||||| || ||| ||||| || | ||||| |||    
T  29161127 ccaaccacttttcttttgtcatttgacatatgacatgaaccttgaattattttgaggttcatatatgatatatcagcttttaattttgttatgtcatttg 29161226  T
Q  261 ttttt 265  Q
    |||||    
T  29161227 ttttt 29161231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 30284507 - 30284393
Alignment:
Q  162 caaccactattgttttctcatttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcacttgt 261  Q
    |||||||| || |||| ||||||||| ||||||||||  |||| |||||| ||| |||||||||||||||| ||| || ||| | || | ||||||||||    
T  30284507 caaccacttttattttgtcatttgatatatgacttgattcttgcattattttgatgttcatatatgatatatcaatttgtaaatttgttatgtcacttgt 30284408  T
Q  262 ttttacttaaaaatg 276  Q
    |||||||||||||||    
T  30284407 ttttacttaaaaatg 30284393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 261
Target Start/End: Original strand, 30051670 - 30051757
Alignment:
Q  174 ttttctcatttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcacttgt 261  Q
    |||| ||||||||| ||| ||||||  ||||||||||| |||  ||||||||||||||| ||||| |||||| || | ||||||||||    
T  30051670 ttttatcatttgatatataacttgaatcttgaattattttgagattcatatatgatatatcaactaataattttgttgtgtcacttgt 30051757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 273
Target Start/End: Complemental strand, 11207528 - 11207434
Alignment:
Q  179 tcatttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcacttgtttttacttaaaa 273  Q
    |||||||||||||||  |||  ||| |||||||  || ||||||||||| |||| |||| ||||||| ||||   ||||||||||||||||||||    
T  11207528 tcatttgatttatgagatgaatcttaaattatttggaggttcatatatggtatatcaacctataattttgctacatcacttgtttttacttaaaa 11207434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 35578349 - 35578290
Alignment:
Q  219 tcatatatgatataccaacttataattctgctttgtcacttgtttttacttaaaaatgtt 278  Q
    |||| ||||||||| |||||||||||| || | |||||| ||||||||||| ||||||||    
T  35578349 tcatgtatgatatatcaacttataattttgttatgtcacgtgtttttactttaaaatgtt 35578290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 277
Target Start/End: Original strand, 42869167 - 42869270
Alignment:
Q  174 ttttctcatttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcacttgtttttacttaaaa 273  Q
    |||| |||||| ||||||||||| |  ||| |||||||  |||| || ||||||||||| |||||||||||| || | ||| |||| | |||| ||||||    
T  42869167 ttttatcatttcatttatgacttaaaacttcaattatttagaagctcgtatatgatatatcaacttataattttgatatgttacttatctttaattaaaa 42869266  T
Q  274 atgt 277  Q
    ||||    
T  42869267 atgt 42869270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 11443406 - 11443446
Alignment:
Q  201 cttgaattattctgaagttcatatatgatataccaacttat 241  Q
    ||||||||||| |||||||||||||||||||| || |||||    
T  11443406 cttgaattattttgaagttcatatatgatatatcagcttat 11443446  T

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Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 245
Target Start/End: Original strand, 5912587 - 5912737
Alignment:
Q  93 attcattcaaataaatcactacctaaacttagtgcagctagcccct--tttgtcaactttgtataactaaccaaccactattgttttctcatttgattta 190  Q
    ||||||||||   ||||||||||||||||||||| ||  |||| ||  |||||||||||||||||||    ||||| || || |||| ||||||||| ||    
T  5912587 attcattcaatcgaatcactacctaaacttagtgtagtcagccactattttgtcaactttgtataac----caaccccttttcttttgtcatttgatata 5912682  T
Q  191 tgacttgagccttgaattattctgaagttcatatatgatataccaacttataatt 245  Q
    | | ||||  ||||||||||| ||| |||||||||| ||||| || |||||||||    
T  5912683 taatttgaatcttgaattattttgaggttcatatataatatatcatcttataatt 5912737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 24188092 - 24188211
Alignment:
Q  158 taaccaaccactattgttttctcatttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcac 257  Q
    |||||||||||| ||  ||| ||||||||||||  | ||||| ||||| | ||| |||  ||| ||||||||||| |||||||||||| || | ||||||    
T  24188092 taaccaaccactttttctttttcatttgatttaatatttgagtcttgact-attttgagtttcttatatgatatatcaacttataattttgttgtgtcac 24188190  T
Q  258 ttgtttttacttaaaaatgtt 278  Q
    ||||||||| | |||||||||    
T  24188191 ttgtttttattcaaaaatgtt 24188211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 205 - 274
Target Start/End: Original strand, 5958671 - 5958740
Alignment:
Q  205 aattattctgaagttcatatatgatataccaacttataattctgctttgtcacttgtttttacttaaaaa 274  Q
    ||||||| ||| |||  ||||| ||||| ||| |||||||| |||||||||| |||||||||||||||||    
T  5958671 aattattttgaggtttgtatataatatatcaatttataattttgctttgtcatttgtttttacttaaaaa 5958740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 267
Target Start/End: Original strand, 38868019 - 38868107
Alignment:
Q  179 tcatttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcacttgtttttac 267  Q
    |||||||||||| ||||||   ||||||||||| |||  ||||| ||||||||| ||||||||||||  |||   ||||||||||||||    
T  38868019 tcatttgatttaggacttggttcttgaattattttgagattcatgtatgatatatcaacttataatttggctacatcacttgtttttac 38868107  T

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Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 179 - 275
Target Start/End: Complemental strand, 48433257 - 48433161
Alignment:
Q  179 tcatttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcacttgtttttacttaaaaat 275  Q
    ||||||||||| ||||||||  |||||||| || ||| |||| ||||||||||| ||||||||| || |||   |||||||||||||||||| ||||    
T  48433257 tcatttgatttttgacttgaatcttgaattcttttgaggttcgtatatgatatatcaacttatatttttgccaagtcacttgtttttacttagaaat 48433161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 275
Target Start/End: Complemental strand, 48433417 - 48433316
Alignment:
Q  174 ttttctcatttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcacttgtttttacttaaaa 273  Q
    |||| ||||||||||| ||||||||  |||||||| || ||| |||| ||||||||||| | ||||||| || |||   |||||||||||||||||| ||    
T  48433417 ttttgtcatttgatttttgacttgaatcttgaattcttttgaggttcgtatatgatatatctacttatatttttgccaagtcacttgtttttacttagaa 48433318  T
Q  274 at 275  Q
    ||    
T  48433317 at 48433316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 33008580 - 33008504
Alignment:
Q  201 cttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcacttgtttttacttaaaaatgt 277  Q
    |||||||||||  || |||||||||||||||| |||||||||  |  | | |||||||||||||||||| |||||||    
T  33008580 cttgaattatttcgaggttcatatatgatatatcaacttatatattagttatgtcacttgtttttactttaaaatgt 33008504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 266
Target Start/End: Complemental strand, 33580861 - 33580774
Alignment:
Q  181 atttgatttatgacttgagcct--tgaattattctgaagttcatatatgatataccaacttataattctgctttgtcacttgttttta 266  Q
    ||||||||||||||||||  ||  ||||| ||| |||||||||||||||| |||||| ||||||||| || | |||| ||||||||||    
T  33580861 atttgatttatgacttgaatctcttgaatcattttgaagttcatatatgacataccagcttataattttgttatgtcccttgttttta 33580774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 276
Target Start/End: Original strand, 6421573 - 6421691
Alignment:
Q  158 taaccaaccactattgttttctcatttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcac 257  Q
    |||||||||||| || |||  |||||||||||||||| | |  |  |||| ||| ||||||| |||||| || || |  ||||| ||| || | ||||||    
T  6421573 taaccaaccacttttctttggtcatttgatttatgacatcaatcaagaatcattttgaagtttatatataatgtatcgccttattattttgttatgtcac 6421672  T
Q  258 ttgtttttacttaaaaatg 276  Q
    |||||||||||||||||||    
T  6421673 ttgtttttacttaaaaatg 6421691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 6349483 - 6349552
Alignment:
Q  160 accaaccactattgttttctcatttgatttatgacttgagccttgaattattctgaagttcatatatgat 229  Q
    |||||||||| || |||| ||||||||||||||||||||  | || |||||| ||| ||||||| |||||    
T  6349483 accaaccacttttcttttttcatttgatttatgacttgaatcatgtattattttgatgttcatacatgat 6349552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 7379647 - 7379745
Alignment:
Q  179 tcatttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcacttgtttttacttaaaaatgt 277  Q
    ||||||||||||||||||||  || |||||||   || ||||||||||||||||||| ||||  ||| ||   ||||||| |||||||| |||||||||    
T  7379647 tcatttgatttatgacttgaatctagaattatatagaggttcatatatgatataccagcttacgattttgacgtgtcactggtttttacataaaaatgt 7379745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 4433135 - 4433071
Alignment:
Q  181 atttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataatt 245  Q
    ||||||||||||||||||  ||||||||||| ||| |||||||||||  || |||||| ||||||    
T  4433135 atttgatttatgacttgaatcttgaattattttgaggttcatatatggcatgccaactaataatt 4433071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 30603465 - 30603516
Alignment:
Q  224 tatgatataccaacttataattctgctttgtcacttgtttttacttaaaaat 275  Q
    ||||||||| ||||||||| || |||| ||||| ||||||||||||||||||    
T  30603465 tatgatatatcaacttatagttttgctatgtcatttgtttttacttaaaaat 30603516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 32847577 - 32847512
Alignment:
Q  180 catttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataatt 245  Q
    |||||| | ||||||||||  ||||||||||| ||| | |||||||||||||| || |||||||||    
T  32847577 catttgttatatgacttgaatcttgaattattttgaggctcatatatgatatatcagcttataatt 32847512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 232
Target Start/End: Original strand, 52750137 - 52750277
Alignment:
Q  93 attcattcaaataaatcactacctaaacttagtgcagctagcccctttt-----gtcaactttgtataactaaccaaccactattgttttctcatttgat 187  Q
    |||||||| ||| ||||||||| ||||||||||| ||| | || |||||     ||||| ||||||||||    |||||||| || |||| |||||||||    
T  52750137 attcattctaatgaatcactacataaacttagtgtagccaaccactttttacttgtcaattttgtataac----caaccacttttcttttgtcatttgat 52750232  T
Q  188 ttatgacttgagccttgaattattctgaagttcatatatgatata 232  Q
     | | ||||||  ||||||||| | ||| ||||||||||||||||    
T  52750233 atttaacttgaatcttgaattagtttgaggttcatatatgatata 52750277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 20505163 - 20505263
Alignment:
Q  179 tcatttgatttatgacttgagccttgaattattctgaagttcatatatgat---ataccaacttataattctgctttgtcacttgtttttacttaaaaat 275  Q
    ||||||||| ||| |||| |  ||||||||||  ||| |||||||||||||   ||| |||||||||| | || ||||||||||| ||||| ||||||||    
T  20505163 tcatttgatatataactttaatcttgaattatattgaggttcatatatgatgatatatcaacttataactttgttttgtcacttggttttaattaaaaat 20505262  T
Q  276 g 276  Q
    |    
T  20505263 g 20505263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 3727278 - 3727335
Alignment:
Q  217 gttcatatatgatataccaacttataattctgctttgtcacttgtttttacttaaaaa 274  Q
    |||| ||||||||||| || |||||||||  ||| |||||||||||||||||| ||||    
T  3727278 gttcgtatatgatatatcagcttataatttagctatgtcacttgtttttactttaaaa 3727335  T

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Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 32471636 - 32471704
Alignment:
Q  191 tgacttgagccttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcactt 259  Q
    ||||||||  ||||||||||| |||  |||||||||| |||| |||||||||||| || | ||||||||    
T  32471636 tgacttgaatcttgaattattttgagattcatatatgctatatcaacttataattttgttatgtcactt 32471704  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 273
Target Start/End: Complemental strand, 15396196 - 15396103
Alignment:
Q  179 tcatttgatttatgacttgagccttgaattattctgaagttcatatatgatataccaacttataattctgctttgtcacttgtttttacttaaaa 273  Q
    |||||||||||| || |||| | |||||||||| ||| |||| ||||||||||| || |||| | || |||| || || ||||||||||||||||    
T  15396196 tcatttgatttacgatttgaacattgaattattttgaggttc-tatatgatatatcagcttacagttttgctatgccatttgtttttacttaaaa 15396103  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 10953536 - 10953499
Alignment:
Q  174 ttttctcatttgatttatgacttgagccttgaattatt 211  Q
    |||||||||||||||||||||||||  |||||||||||    
T  10953536 ttttctcatttgatttatgacttgaatcttgaattatt 10953499  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 14990911 - 14990878
Alignment:
Q  108 tcactacctaaacttagtgcagctagcccctttt 141  Q
    |||||||||||||||||||||||||||| |||||    
T  14990911 tcactacctaaacttagtgcagctagccactttt 14990878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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