View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3831_high_3 (Length: 275)
Name: NF3831_high_3
Description: NF3831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3831_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 53004287 - 53004109
Alignment:
| Q |
21 |
aatgatcgatggccatgtaaagcaatttctatcaaagaaaagtattgaaaataatgaaggacgtggtagggtgttcnnnnnnnnnnnatgcgatactatt |
120 |
Q |
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| T |
53004287 |
aatgatcgatggccatgtaaagcaatttctatcaaagaaaagtattgaaaataatgaaggacgtggtagggtgttcttcttttttttatgcgatactatt |
53004188 |
T |
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| Q |
121 |
aatttaaagatttcaaagtgctgttatagtttcttttcagtttggattatttgatcaatttgcattaaatttcgataac |
199 |
Q |
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| T |
53004187 |
aatttaaagatttcaaagtgctattatagtttcttttcagtttggattatttgatcaatttgcattaaatttcgataac |
53004109 |
T |
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