View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3831_low_9 (Length: 210)
Name: NF3831_low_9
Description: NF3831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3831_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 81 - 200
Target Start/End: Original strand, 15772715 - 15772834
Alignment:
| Q |
81 |
caaatcattcacattgacaataagagtttaacgtaatcggtcaacttcttaccaattaagtcaattttcattggttaaacaaaaatttcttatcacacca |
180 |
Q |
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| T |
15772715 |
caaatcattcatattgacaacaagagtttaacgtaatcggtcaacttcttaccaactaagtcaattttcattggttaaacaaaaatttcttatcacacca |
15772814 |
T |
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| Q |
181 |
tgcttctcaaatgtcctttg |
200 |
Q |
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||||||||| |||| ||||| |
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| T |
15772815 |
tgcttctcacatgttctttg |
15772834 |
T |
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