View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3832_high_5 (Length: 295)
Name: NF3832_high_5
Description: NF3832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3832_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 14 - 290
Target Start/End: Complemental strand, 31594070 - 31593799
Alignment:
| Q |
14 |
caaacacttatacatggatggagagttatgtctttgttggatgatcttaggaattttcttcgaacgattcccaaccatttcttggatacgcccattttag |
113 |
Q |
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| T |
31594070 |
caaacacttatacatggatggagagttatgtctttgttggatgatcttaggaattttcttcgaacgattcccaaccatttcttggatacgcccattttag |
31593971 |
T |
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| Q |
114 |
cttgtatacttttagtttggaatgtgaattgaattaatacatacatgtacacccatttgttataggtccaccacatcttagtaatcacattaaaaaatgt |
213 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |
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| T |
31593970 |
cttgtatacttttagtttggaatgtgaatt-----aatacatacatgtacacccatttgttataggtccaccacatctgattaatcacattaaaaaatgt |
31593876 |
T |
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| Q |
214 |
ggataattcaattgaataaatgattaatgtttgatgctttttggaagggttataggtgattggattatgtttctgtg |
290 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
31593875 |
ggataattcaattgaataaatgattaatgtttgatgctttttggaagggttataggtgattggattatgtttatgtg |
31593799 |
T |
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