View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3832_low_4 (Length: 393)
Name: NF3832_low_4
Description: NF3832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3832_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 125 - 375
Target Start/End: Original strand, 51755611 - 51755866
Alignment:
| Q |
125 |
ccccctccactcttaccatcaaaagttaaaagaa-----gaacacgctcacagagatgaacatgtcagaaaattctccacttgacactctagctttcaac |
219 |
Q |
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| T |
51755611 |
ccccctccactcttaccatcaaaagtgaaaagaagagaagaacacgctcacagagatgaacatgttagaaaattctccacttgacactctagctttcaac |
51755710 |
T |
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| Q |
220 |
tacttgagcttcgatttcttcaaccatttatggacatggctcgccgtaatcttctggaggatcccaacccctaaacctgaattgttacctccttcccacg |
319 |
Q |
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| T |
51755711 |
tacttgagcttcgatttcttcaaccatttatggacatggctcgccgtcatcttctggaggatcccaacccctaaacctgaattgttacctccttcccacg |
51755810 |
T |
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| Q |
320 |
acacttcctccgataaacctcacctaggtctggaagtgttggaacctcgtcatgat |
375 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51755811 |
acacttcctccgataaacctcacctaggtctggaagtgttggaacctcgtcatgat |
51755866 |
T |
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