View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3834_high_10 (Length: 238)
Name: NF3834_high_10
Description: NF3834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3834_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 30319815 - 30320034
Alignment:
| Q |
1 |
aggacttacatggagcaaggttgcttcattggctaaaatggaaacaaaaatgagagagaagatgagacaatgagaaggaaccatcatggttggttttgta |
100 |
Q |
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| T |
30319815 |
aggacttacatggagcaaggttgcttcattggctaaaatggaaacaaaaatgagagagaagatgagacaatgagaaggaaccatcatggttggttttgta |
30319914 |
T |
|
| Q |
101 |
acagacaagagcttcatagtcttaggtttatgtttttgaaaaagggctagttggtaatcttgtttttgtgtggatgaggtttaaattggtatatcataaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30319915 |
acagacaagagcttcatagtcttaggtttatgtttttgaaaaagggctagttggtaatcttgtttttgtgtggatgaggtttaaattggtatatcataaa |
30320014 |
T |
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| Q |
201 |
tgaatatttggtggctattt |
220 |
Q |
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|||||||||||||||||||| |
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| T |
30320015 |
tgaatatttggtggctattt |
30320034 |
T |
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