View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3834_low_13 (Length: 237)
Name: NF3834_low_13
Description: NF3834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3834_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 4 - 222
Target Start/End: Original strand, 6071094 - 6071312
Alignment:
| Q |
4 |
ataatactaccagaaaccaacattggccttctatttaattcttctttttgaaatgtgctttttatttatcataataataatattacaaagcctaactttg |
103 |
Q |
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| T |
6071094 |
ataatgctaccagaaaccaacattggccttctatttaattcttctttttgaaatgtgctttttatttatcataataataatattacaaagcctaactttg |
6071193 |
T |
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| Q |
104 |
atataatgttaaactaagaaggaacatggtatgtggaataaggaggagtatttaacaatatggaatatgtatatttaccacttcaattctagctagataa |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6071194 |
atataatgttaaactaagaaggaacatggtatgtggaataaagaggagtatttaacaatatggaatatgtatatttaccacttcaattctagctagataa |
6071293 |
T |
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| Q |
204 |
ctactctaccagacatagg |
222 |
Q |
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||||||||||||||||||| |
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| T |
6071294 |
ctactctaccagacatagg |
6071312 |
T |
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