View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3835_high_2 (Length: 512)

Name: NF3835_high_2
Description: NF3835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3835_high_2
NF3835_high_2
[»] chr5 (39 HSPs)
chr5 (1-112)||(39987919-39988030)
chr5 (1-111)||(8049004-8049114)
chr5 (1-111)||(22482238-22482348)
chr5 (1-110)||(3667903-3668012)
chr5 (7-111)||(7385885-7385989)
chr5 (1-111)||(35760238-35760348)
chr5 (3-107)||(24045881-24045985)
chr5 (1-111)||(32454586-32454696)
chr5 (2-111)||(32030764-32030873)
chr5 (1-110)||(41834941-41835050)
chr5 (1-112)||(5710338-5710449)
chr5 (1-111)||(40495311-40495421)
chr5 (1-112)||(2430249-2430359)
chr5 (4-111)||(40885263-40885370)
chr5 (1-112)||(42146357-42146467)
chr5 (1-111)||(10058123-10058233)
chr5 (1-111)||(40791023-40791132)
chr5 (1-109)||(9275439-9275547)
chr5 (1-89)||(13253058-13253145)
chr5 (1-85)||(4292198-4292282)
chr5 (2-85)||(3060203-3060286)
chr5 (1-83)||(7178827-7178908)
chr5 (1-86)||(41740571-41740656)
chr5 (7-83)||(7714995-7715071)
chr5 (5-85)||(27021181-27021261)
chr5 (1-110)||(33953856-33953964)
chr5 (7-83)||(34106928-34107004)
chr5 (3-112)||(16158417-16158526)
chr5 (2-54)||(2483724-2483776)
chr5 (29-85)||(35847869-35847925)
chr5 (1-55)||(22811075-22811129)
chr5 (1-83)||(23914235-23914317)
chr5 (4-53)||(41959512-41959561)
chr5 (3-83)||(19784864-19784944)
chr5 (29-87)||(2694737-2694795)
chr5 (460-509)||(19434654-19434703)
chr5 (3-83)||(2868335-2868414)
chr5 (1-85)||(33467971-33468055)
chr5 (45-85)||(41741617-41741657)
[»] chr1 (49 HSPs)
chr1 (1-112)||(1199886-1199997)
chr1 (1-112)||(20800233-20800344)
chr1 (1-111)||(35569159-35569269)
chr1 (1-112)||(48510967-48511078)
chr1 (1-112)||(42850175-42850286)
chr1 (1-109)||(11023289-11023396)
chr1 (1-112)||(6166169-6166279)
chr1 (1-112)||(31223433-31223544)
chr1 (1-112)||(50977296-50977407)
chr1 (3-111)||(26058302-26058410)
chr1 (3-111)||(27801609-27801717)
chr1 (5-112)||(7826310-7826417)
chr1 (1-111)||(10470649-10470758)
chr1 (1-111)||(13056056-13056166)
chr1 (2-112)||(43728834-43728943)
chr1 (1-111)||(47123445-47123555)
chr1 (3-112)||(50406191-50406300)
chr1 (1-109)||(5410698-5410806)
chr1 (14-110)||(6464679-6464775)
chr1 (1-109)||(25230066-25230173)
chr1 (1-83)||(40229455-40229537)
chr1 (1-86)||(15884286-15884371)
chr1 (1-111)||(12468271-12468380)
chr1 (1-83)||(34718510-34718592)
chr1 (2-86)||(40352451-40352534)
chr1 (1-105)||(45710108-45710211)
chr1 (1-86)||(49242964-49243049)
chr1 (1-83)||(4347033-4347114)
chr1 (29-111)||(12247506-12247588)
chr1 (6-68)||(11561886-11561948)
chr1 (5-83)||(13344836-13344913)
chr1 (17-111)||(35536146-35536240)
chr1 (29-87)||(43134537-43134595)
chr1 (29-85)||(29441271-29441327)
chr1 (1-56)||(291729-291784)
chr1 (5-68)||(4369803-4369865)
chr1 (1-108)||(47981756-47981862)
chr1 (1-83)||(25061285-25061367)
chr1 (6-83)||(41989-42066)
chr1 (2-111)||(13931683-13931790)
chr1 (71-111)||(291704-291744)
chr1 (7-70)||(47085898-47085961)
chr1 (32-86)||(30557624-30557677)
chr1 (14-107)||(9447604-9447696)
chr1 (2-70)||(16556295-16556362)
chr1 (1-53)||(29759710-29759762)
chr1 (8-108)||(36447637-36447736)
chr1 (1-53)||(43730059-43730111)
chr1 (1-45)||(48002391-48002434)
[»] chr2 (48 HSPs)
chr2 (1-112)||(1944992-1945103)
chr2 (1-111)||(2215296-2215406)
chr2 (1-112)||(44619014-44619125)
chr2 (1-110)||(2213550-2213659)
chr2 (1-112)||(5916195-5916305)
chr2 (1-111)||(36312321-36312430)
chr2 (1-110)||(7472629-7472737)
chr2 (1-110)||(28127242-28127351)
chr2 (5-86)||(30007532-30007613)
chr2 (4-111)||(31562641-31562747)
chr2 (1-112)||(36548243-36548354)
chr2 (1-111)||(9988455-9988565)
chr2 (1-109)||(32502030-32502137)
chr2 (1-111)||(7296199-7296309)
chr2 (1-86)||(2213691-2213776)
chr2 (1-86)||(34433285-34433370)
chr2 (1-112)||(8170357-8170467)
chr2 (1-112)||(14821207-14821317)
chr2 (1-112)||(23358302-23358412)
chr2 (1-84)||(41580691-41580774)
chr2 (2-83)||(31224725-31224806)
chr2 (2-83)||(42089510-42089591)
chr2 (1-85)||(45714648-45714732)
chr2 (1-88)||(3853944-3854031)
chr2 (1-92)||(7295321-7295412)
chr2 (1-83)||(25747864-25747945)
chr2 (1-86)||(18511146-18511231)
chr2 (1-110)||(26207884-26207993)
chr2 (1-110)||(39141425-39141533)
chr2 (2-85)||(16467131-16467214)
chr2 (1-84)||(38600424-38600507)
chr2 (14-105)||(42515936-42516027)
chr2 (1-86)||(28261338-28261423)
chr2 (2-68)||(27911451-27911517)
chr2 (1-53)||(23377548-23377600)
chr2 (1-112)||(12110918-12111028)
chr2 (29-84)||(23267345-23267400)
chr2 (1-55)||(23359940-23359994)
chr2 (5-83)||(28641690-28641768)
chr2 (3-76)||(8041325-8041397)
chr2 (3-83)||(43858194-43858274)
chr2 (26-81)||(5055238-5055292)
chr2 (1-87)||(1763264-1763349)
chr2 (1-83)||(26806238-26806319)
chr2 (1-55)||(30599914-30599968)
chr2 (63-111)||(27911497-27911545)
chr2 (32-83)||(33019070-33019119)
chr2 (71-111)||(43436265-43436305)
[»] chr3 (50 HSPs)
chr3 (1-111)||(50664793-50664903)
chr3 (1-111)||(23496352-23496462)
chr3 (2-110)||(10853224-10853332)
chr3 (1-112)||(38125397-38125507)
chr3 (1-110)||(26519699-26519808)
chr3 (1-110)||(42318365-42318473)
chr3 (1-111)||(4984616-4984726)
chr3 (1-111)||(3348278-3348388)
chr3 (1-111)||(10334173-10334283)
chr3 (1-111)||(44939372-44939481)
chr3 (1-109)||(21225025-21225133)
chr3 (1-112)||(55154537-55154647)
chr3 (1-111)||(30811488-30811597)
chr3 (1-111)||(38172263-38172373)
chr3 (5-111)||(52966765-52966871)
chr3 (1-110)||(53074938-53075046)
chr3 (1-112)||(15511331-15511442)
chr3 (1-112)||(48189397-48189507)
chr3 (1-87)||(35425369-35425454)
chr3 (2-110)||(38340841-38340949)
chr3 (1-108)||(8424689-8424795)
chr3 (1-104)||(35930773-35930876)
chr3 (1-76)||(53179883-53179958)
chr3 (1-83)||(34561143-34561225)
chr3 (1-87)||(42475744-42475830)
chr3 (1-111)||(44224797-44224907)
chr3 (2-111)||(20813182-20813290)
chr3 (1-70)||(25848067-25848136)
chr3 (1-89)||(23207046-23207134)
chr3 (11-79)||(29716674-29716742)
chr3 (2-92)||(19877453-19877543)
chr3 (1-111)||(44225600-44225709)
chr3 (1-70)||(31084242-31084311)
chr3 (4-109)||(16246054-16246157)
chr3 (1-85)||(25181245-25181328)
chr3 (2-86)||(40415277-40415361)
chr3 (1-84)||(31766159-31766241)
chr3 (1-55)||(7012675-7012729)
chr3 (5-55)||(23918881-23918931)
chr3 (54-112)||(35930876-35930934)
chr3 (29-83)||(52813278-52813332)
chr3 (2-86)||(42644298-42644382)
chr3 (1-85)||(49526651-49526735)
chr3 (1-53)||(52931586-52931638)
chr3 (1-83)||(21023201-21023281)
chr3 (270-315)||(13778766-13778811)
chr3 (2-107)||(41115251-41115355)
chr3 (5-53)||(10852727-10852775)
chr3 (193-273)||(13793031-13793111)
chr3 (10-46)||(30809966-30810002)
[»] chr7 (42 HSPs)
chr7 (1-109)||(38230124-38230232)
chr7 (4-111)||(37639489-37639596)
chr7 (1-108)||(39391083-39391190)
chr7 (1-111)||(3622403-3622513)
chr7 (1-112)||(48459766-48459877)
chr7 (5-111)||(10371901-10372007)
chr7 (3-110)||(41715715-41715822)
chr7 (1-108)||(47021975-47022082)
chr7 (1-107)||(3375546-3375652)
chr7 (1-111)||(37562626-37562736)
chr7 (1-88)||(44967365-44967452)
chr7 (3-108)||(47217487-47217592)
chr7 (1-110)||(3342846-3342955)
chr7 (3-112)||(32186998-32187107)
chr7 (2-108)||(43631642-43631747)
chr7 (1-86)||(3750742-3750827)
chr7 (1-86)||(9456161-9456245)
chr7 (2-111)||(39977609-39977718)
chr7 (6-83)||(46541661-46541738)
chr7 (29-112)||(34010423-34010505)
chr7 (1-111)||(34365925-34366035)
chr7 (1-83)||(42752162-42752244)
chr7 (2-108)||(48134637-48134742)
chr7 (2-83)||(386452-386533)
chr7 (2-111)||(39634108-39634217)
chr7 (6-86)||(12632051-12632131)
chr7 (31-110)||(19097483-19097562)
chr7 (4-112)||(37008295-37008400)
chr7 (2-112)||(24770853-24770963)
chr7 (1-91)||(36920141-36920231)
chr7 (6-83)||(12964659-12964736)
chr7 (5-85)||(20088929-20089009)
chr7 (1-78)||(42904609-42904686)
chr7 (2-111)||(43737882-43737991)
chr7 (4-83)||(34010932-34011011)
chr7 (2-74)||(42740449-42740521)
chr7 (193-270)||(20024294-20024372)
chr7 (5-53)||(44274698-44274746)
chr7 (1-83)||(4228603-4228684)
chr7 (1-55)||(32205981-32206035)
chr7 (5-54)||(38494276-38494325)
chr7 (33-85)||(12212438-12212490)
[»] chr6 (21 HSPs)
chr6 (1-112)||(13739241-13739351)
chr6 (1-112)||(13744741-13744851)
chr6 (1-111)||(33898961-33899071)
chr6 (7-108)||(17829957-17830058)
chr6 (1-112)||(6208018-6208128)
chr6 (2-110)||(10826127-10826235)
chr6 (1-111)||(29409207-29409317)
chr6 (2-87)||(5584029-5584113)
chr6 (1-112)||(1312394-1312505)
chr6 (29-86)||(32599443-32599500)
chr6 (1-56)||(16548174-16548229)
chr6 (1-83)||(21254863-21254944)
chr6 (1-70)||(16442347-16442416)
chr6 (29-85)||(15151487-15151543)
chr6 (3-84)||(699594-699674)
chr6 (2-41)||(7486522-7486561)
chr6 (32-83)||(16121985-16122036)
chr6 (29-83)||(31132526-31132580)
chr6 (34-83)||(4911032-4911080)
chr6 (41-86)||(29399774-29399819)
chr6 (4-112)||(3605707-3605814)
[»] chr8 (47 HSPs)
chr8 (2-112)||(3467577-3467687)
chr8 (1-111)||(22936749-22936859)
chr8 (2-108)||(26243168-26243274)
chr8 (1-111)||(28425428-28425538)
chr8 (2-111)||(3097162-3097271)
chr8 (2-109)||(4941739-4941846)
chr8 (2-108)||(42143323-42143429)
chr8 (1-111)||(15206739-15206849)
chr8 (1-110)||(36121502-36121610)
chr8 (1-102)||(40742260-40742361)
chr8 (2-110)||(25697917-25698024)
chr8 (1-109)||(41289016-41289124)
chr8 (1-85)||(44926884-44926967)
chr8 (32-110)||(30085596-30085674)
chr8 (1-92)||(440164-440255)
chr8 (1-111)||(38114488-38114597)
chr8 (1-83)||(31246299-31246381)
chr8 (28-109)||(36113999-36114080)
chr8 (4-105)||(38152137-38152237)
chr8 (1-70)||(40742167-40742236)
chr8 (1-85)||(25497735-25497818)
chr8 (9-85)||(30759287-30759363)
chr8 (1-112)||(6399063-6399174)
chr8 (29-108)||(24897547-24897626)
chr8 (2-53)||(42149049-42149100)
chr8 (2-83)||(30081635-30081715)
chr8 (43-111)||(29023308-29023376)
chr8 (1-53)||(43550934-43550986)
chr8 (1-112)||(8125014-8125124)
chr8 (32-87)||(27649819-27649874)
chr8 (2-87)||(36779435-36779519)
chr8 (29-85)||(3465422-3465478)
chr8 (1-84)||(33627017-33627100)
chr8 (1-86)||(35615752-35615837)
chr8 (2-55)||(39219765-39219818)
chr8 (1-53)||(1373082-1373134)
chr8 (1-53)||(19649229-19649281)
chr8 (5-53)||(20190186-20190234)
chr8 (3-83)||(22552724-22552804)
chr8 (43-111)||(26125842-26125910)
chr8 (1-83)||(8702392-8702473)
chr8 (7-53)||(10552923-10552969)
chr8 (1-55)||(26490976-26491030)
chr8 (1-83)||(29970845-29970926)
chr8 (1-55)||(33588763-33588817)
chr8 (1-46)||(38335810-38335855)
chr8 (59-111)||(45147221-45147273)
[»] chr4 (69 HSPs)
chr4 (1-110)||(26651805-26651914)
chr4 (1-109)||(43781477-43781584)
chr4 (1-112)||(19592186-19592297)
chr4 (1-112)||(46830024-46830135)
chr4 (1-111)||(16566325-16566435)
chr4 (1-111)||(51922960-51923070)
chr4 (1-111)||(29149263-29149373)
chr4 (3-112)||(48550239-48550348)
chr4 (1-109)||(39636805-39636913)
chr4 (1-108)||(30842152-30842258)
chr4 (1-112)||(32238014-32238124)
chr4 (1-104)||(55638718-55638821)
chr4 (1-111)||(28987039-28987148)
chr4 (1-111)||(39187754-39187864)
chr4 (1-111)||(43772079-43772189)
chr4 (1-87)||(48407678-48407763)
chr4 (1-111)||(54150546-54150656)
chr4 (1-110)||(14072523-14072631)
chr4 (6-91)||(33574203-33574288)
chr4 (1-111)||(14564102-14564212)
chr4 (1-110)||(6138577-6138686)
chr4 (1-112)||(13167545-13167656)
chr4 (2-85)||(42944880-42944963)
chr4 (1-111)||(49519750-49519863)
chr4 (1-111)||(6505221-6505331)
chr4 (1-107)||(9893731-9893837)
chr4 (1-87)||(25312735-25312821)
chr4 (1-112)||(54153065-54153175)
chr4 (1-83)||(13183034-13183116)
chr4 (1-83)||(46926068-46926150)
chr4 (4-92)||(14076038-14076125)
chr4 (2-110)||(31520328-31520436)
chr4 (3-111)||(41866176-41866284)
chr4 (29-107)||(9889295-9889373)
chr4 (2-112)||(15603381-15603491)
chr4 (1-83)||(49136542-49136624)
chr4 (29-110)||(26426072-26426153)
chr4 (1-110)||(48908294-48908402)
chr4 (5-68)||(4954050-4954113)
chr4 (1-112)||(54488625-54488736)
chr4 (1-83)||(38306031-38306113)
chr4 (6-83)||(38263924-38264001)
chr4 (2-70)||(48550424-48550492)
chr4 (4-92)||(54735626-54735713)
chr4 (2-84)||(14054872-14054954)
chr4 (1-70)||(15619634-15619703)
chr4 (3-76)||(19599487-19599559)
chr4 (1-57)||(56241845-56241901)
chr4 (1-84)||(38740286-38740368)
chr4 (3-53)||(2175161-2175211)
chr4 (63-111)||(15619681-15619729)
chr4 (2-70)||(39993574-39993642)
chr4 (28-107)||(45779970-45780048)
chr4 (8-85)||(22694579-22694656)
chr4 (1-55)||(22699762-22699816)
chr4 (1-55)||(22980714-22980768)
chr4 (1-55)||(22994301-22994355)
chr4 (66-112)||(26459851-26459897)
chr4 (4-54)||(52062991-52063041)
chr4 (36-85)||(1616515-1616563)
chr4 (2-83)||(14597609-14597689)
chr4 (1-46)||(16492947-16492992)
chr4 (444-505)||(24717275-24717336)
chr4 (5-54)||(28947762-28947811)
chr4 (29-86)||(53532025-53532082)
chr4 (1-70)||(53914919-53914987)
chr4 (3-83)||(523172-523252)
chr4 (29-85)||(4649911-4649967)
chr4 (2-70)||(36150625-36150693)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-112)||(8484-8595)
[»] scaffold0983 (1 HSPs)
scaffold0983 (4-110)||(2225-2331)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-111)||(253163-253273)
scaffold0005 (2-83)||(219689-219769)
[»] scaffold0394 (1 HSPs)
scaffold0394 (15-111)||(5786-5882)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-110)||(29080-29188)
[»] scaffold0381 (1 HSPs)
scaffold0381 (29-107)||(9173-9251)
[»] scaffold0217 (1 HSPs)
scaffold0217 (3-83)||(2011-2091)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-84)||(118393-118476)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-83)||(15242-15323)
[»] scaffold0015 (1 HSPs)
scaffold0015 (2-84)||(65536-65617)
[»] scaffold0009 (1 HSPs)
scaffold0009 (5-55)||(199381-199431)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-54)||(138521-138574)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-53)||(38369-38421)


Alignment Details
Target: chr5 (Bit Score: 84; Significance: 1e-39; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 39988030 - 39987919
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| |||||  ||||||    
T  39988030 gtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccgccggtatacc 39987931  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  39987930 aaacacacactt 39987919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 8049114 - 8049004
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| ||||| |||||||    
T  8049114 gtatccaaacataaatcaattaacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccgccgctatacc 8049015  T
Q  101 aaacacacact 111  Q
    ||| |||||||    
T  8049014 aaagacacact 8049004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 22482238 - 22482348
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| ||||| | |||||    
T  22482238 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattctccccgccgccatacc 22482337  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  22482338 aaacacacact 22482348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3667903 - 3668012
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || ||||||||||| | |||||| |||||||| ||| |||||||||||||||||||||||| || ||||||||||    
T  3667903 gtatccaaacataaatcaattcacattcaactcactttttaacaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccactatacc 3668002  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  3668003 aaacacacac 3668012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 7385989 - 7385885
Alignment:
Q  7 aaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacac 106  Q
    |||||||||||||||||||| |||| |||||||||||||||| |||||||||||| | |||||||||||||||||||||| ||||| |||||| ||||||    
T  7385989 aaacataaatcaattcacctcaaacccacttttaaccaaaatcaattctctaaaacttaattctatcaaaatcaattctcaccgccgctatactaaacac 7385890  T
Q  107 acact 111  Q
    |||||    
T  7385889 acact 7385885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 35760238 - 35760348
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || ||||||||||| | |||||| |||||||| ||| |||||||||||||||||||||||| || || |||||||    
T  35760238 gtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctatacc 35760337  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  35760338 aaacacacact 35760348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 24045881 - 24045985
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaa 102  Q
    |||||||||||||||||||||| | | ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || || | |||||||    
T  24045881 atccaaacataaatcaattcacatcagactcacttttaaccaaaatcaattctctcaaattcaattctatcaaaatcaattctcaccaccgccataccaa 24045980  T
Q  103 acaca 107  Q
    |||||    
T  24045981 acaca 24045985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 32454586 - 32454696
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattct-atcaaaatcaattctcgccgccactatac 99  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||| || | ||||    
T  32454586 gtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctaatcaaaatcaattctcgccaccgccatac 32454684  T
Q  100 caaacacacact 111  Q
    ||||||||||||    
T  32454685 caaacacacact 32454696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 32030764 - 32030873
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    |||| ||||| |||||||||||| |  |||| ||||||||||||||| |||||||| ||| |||||||||||||||||||||||| || |||||||||||    
T  32030764 tatcaaaacaaaaatcaattcacatctaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccactatacca 32030863  T
Q  102 aacacacact 111  Q
    ||||||||||    
T  32030864 aacacacact 32030873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41834941 - 41835050
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||| |||||||| ||| | |||||||||||||||||||||| || || | |||||    
T  41834941 gtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctcaaactgaattctatcaaaatcaattctccccaccgccatacc 41835040  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  41835041 aaacacacac 41835050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 5710449 - 5710338
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||||| ||||||||   ||||||||||||||||||||| |||||| | ||| || |||||||||||||||||||||||| || | |||||    
T  5710449 gtatccaaacataaagcaattcacaccaaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaattctcgccaccgccatacc 5710350  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  5710349 aaacacacactt 5710338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 40495421 - 40495311
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||||||||||| || | ||||||||||||||||||||| |||| | | ||| |||||||||||||||||||||||  ||||| | |||||    
T  40495421 gtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaattcttcccgccgccatacc 40495322  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  40495321 aaacacacact 40495311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 2430359 - 2430249
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||  || |||||||||||||||||||| |||||||| ||| ||||||| |||||||| |||||||||| || | |||||    
T  2430359 gtatccaaacataa-tcaattcatgttcaactcacttttaaccaaaatcaattctctcaaactcaattccatcaaaatgaattctcgccaccgccatacc 2430261  T
Q  101 aaacacacactt 112  Q
    ||| ||||||||    
T  2430260 aaatacacactt 2430249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 40885263 - 40885370
Alignment:
Q  4 tccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaa 103  Q
    ||||||||||||||||||||| |  ||||||||||||| |||||| |||||||| ||| ||||||||| ||||||||||| || || || | ||||||||    
T  40885263 tccaaacataaatcaattcacatccaactcacttttaatcaaaatcaattctcttaaactcaattctaacaaaatcaattttcaccaccgccataccaaa 40885362  T
Q  104 cacacact 111  Q
    ||||||||    
T  40885363 cacacact 40885370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 42146357 - 42146467
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||  |  |||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||||| |||||   |||||    
T  42146357 gtatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattctccccgccgtcatacc 42146455  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  42146456 aaacacacactt 42146467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 10058123 - 10058233
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||  |  |||||||||||||||||||| ||| |||| ||| |||||| ||||||||||||||||| || || | ||||     
T  10058123 gtatccaaacataaatcaattcatttccaactcacttttaaccaaaatcaatactctcaaactcaattatatcaaaatcaattctccccaccgccatact 10058222  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  10058223 aaacacacact 10058233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 40791132 - 40791023
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||  |  |||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||||| |||||   |||||    
T  40791132 gtatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattctccccgccgtgatacc 40791034  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  40791033 aaacacacact 40791023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 9275547 - 9275439
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||||||||||| || |  |||||||||||||||||||| |||||||| ||| |||||| |||||||||||||| || || || | | |||    
T  9275547 gtatccaaacataaatcaattaacatctaactcacttttaaccaaaatcaattctcttaaactcaattttatcaaaatcaattttccccaccgccaaacc 9275448  T
Q  101 aaacacaca 109  Q
    |||||||||    
T  9275447 aaacacaca 9275439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13253145 - 13253058
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgcc 89  Q
    |||||||||||||| ||||||||  || |||||||||||||||||||| |||||| | ||| |||||||||||||||||||||||||||    
T  13253145 gtatccaaacataa-tcaattcatattcaactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattctcgcc 13253058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 4292198 - 4292282
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    |||||||||||||||||||||||| || |||| | |||||| |||||| |||||||| ||| | |||||||||||||||||||||    
T  4292198 gtatccaaacataaatcaattcacattcaacttatttttaatcaaaatcaattctctcaaacttaattctatcaaaatcaattct 4292282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 3060286 - 3060203
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    ||||||||||||||| ||||||  | |||||||||||||| |||||| |||||||| ||| | |||||||||||||||||||||    
T  3060286 tatccaaacataaattaattcatataaaactcacttttaatcaaaatcaattctctcaaacttaattctatcaaaatcaattct 3060203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7178827 - 7178908
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||||||| || || ||||||||||||  ||||||||||||||| ||| |||||||||||||| ||||||    
T  7178827 gtatccaaacataaatcaatt-acattcaactcacttttagtcaaaattaattctctcaaactcaattctatcaaactcaatt 7178908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 41740656 - 41740571
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    |||| |||||||||| ||||||| || |||||||| | ||| |||||| |||||||| ||| ||||||||||||||||||||||||    
T  41740656 gtattcaaacataaaccaattcatctcaaactcacctataatcaaaatcaattctctcaaactcaattctatcaaaatcaattctc 41740571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 7714995 - 7715071
Alignment:
Q  7 aaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||| |||||||||  |  |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||    
T  7714995 aaacatatatcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 7715071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 27021181 - 27021261
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    |||||||||||||||||||| || |||||| ||||||||||||| |||| ||| ||| |||||| ||||||||||| ||||    
T  27021181 ccaaacataaatcaattcacatttaactcatttttaaccaaaatcaattttctcaaactcaattatatcaaaatcagttct 27021261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 33953964 - 33953856
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| |||||| || || |||||||||||||  ||||| |||||||| ||| ||||||||| ||||||||||| || || |  | |||||    
T  33953964 gtatccaaacataa-tcaatttacgttcaactcacttttaaataaaatcaattctctcaaactcaattctaccaaaatcaattttcaccactgccatacc 33953866  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  33953865 aaacacacac 33953856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 34107004 - 34106928
Alignment:
Q  7 aaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||| ||||||||||| |  |||||||||||||||||||  |||||| | ||| |||||||||||||||||||||    
T  34107004 aaacattaatcaattcacatctaactcacttttaaccaaaaacaattcttttaaactcaattctatcaaaatcaatt 34106928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 16158526 - 16158417
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaa 102  Q
    ||||||| |||||| ||||||| | |||||||||||||| |||||| |||||| | ||| |||| ||||| |||||||||| | || |||   | |||||    
T  16158526 atccaaatataaattaattcacatcaaactcacttttaatcaaaatcaattctttcaaactcaaatctataaaaatcaattatggctgccgtcaaaccaa 16158427  T
Q  103 acacacactt 112  Q
    ||||||||||    
T  16158426 acacacactt 16158417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 2483776 - 2483724
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattc 54  Q
    ||||||||||||||||||||||| || |||||||||||||| ||||| |||||    
T  2483776 tatccaaacataaatcaattcacattcaactcacttttaactaaaatcaattc 2483724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 35847925 - 35847869
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    ||||||||| |||||||||| ||||| || ||| |||||||||||||||||||||||    
T  35847925 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 35847869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22811075 - 22811129
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct 55  Q
    |||||||||||||||||| || || || |||||||||||||||||||| ||||||    
T  22811075 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 22811129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23914317 - 23914235
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||| ||||||||||||  |  |||||| ||||||  | ||| |||||||| ||| |||||||||||||||||||||    
T  23914317 gtatccaaacgtaaatcaattcatatccaactcaattttaagtataatcaattctctcaaaatcaattctatcaaaatcaatt 23914235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 41959512 - 41959561
Alignment:
Q  4 tccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    ||||||||||||| ||||||| || |||||||||||||| ||||||||||    
T  41959512 tccaaacataaattaattcacttttaactcacttttaactaaaattaatt 41959561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 19784864 - 19784944
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||| || || || || |||||||||||||||||||| |||||    ||| ||||||| |||||||||||||    
T  19784864 atccaaacataaaccactttacattcaactcacttttaaccaaaatcaattcaaataaaatcaattcaatcaaaatcaatt 19784944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 2694795 - 2694737
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcg 87  Q
    |||||||||||||||||||| |||||  | ||| ||||||||  |||||||||||||||    
T  2694795 aactcacttttaaccaaaatcaattcaatcaaaatcaattctgacaaaatcaattctcg 2694737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 509
Target Start/End: Original strand, 19434654 - 19434703
Alignment:
Q  460 gattgagatgaggaagccctccaggttaaggcaaggaaatctaggattag 509  Q
    ||||||||| |||||| |||| ||||| ||| ||||||||||||||||||    
T  19434654 gattgagattaggaagtcctctaggtttaggtaaggaaatctaggattag 19434703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 2868414 - 2868335
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||| ||||||| || || || |||||||||||||| ||||| ||||||  |||||| |||||||  ||||||||||    
T  2868414 atccaaacttaaatcactttacattcaactcacttttaactaaaatcaattctacaaaatt-aattctactaaaatcaatt 2868335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 33468055 - 33467971
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    ||||||||||| ||||||||  ||  | |||||||||||||||||||| | |||| | ||| |||||| | | ||||||||||||    
T  33468055 gtatccaaacacaaatcaatatacactcaactcacttttaaccaaaatcagttctatcaaaatcaattttgttaaaatcaattct 33467971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 41741657 - 41741617
Alignment:
Q  45 aaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    ||||||||||| | ||| |||||||||||||||||||||||    
T  41741657 aaattaattctttcaaaatcaattctatcaaaatcaattct 41741617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 1199886 - 1199997
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| || | |||||    
T  1199886 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctcgccaccgccatacc 1199985  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  1199986 aaacacacactt 1199997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 20800344 - 20800233
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| ||||| | |||||    
T  20800344 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattctccccgccgccatacc 20800245  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  20800244 aaacacacactt 20800233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 35569269 - 35569159
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| ||||| | |||||    
T  35569269 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattctccccgccgccatacc 35569170  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  35569169 aaacacacact 35569159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 48510967 - 48511078
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||| ||| ||| ||||||| |||||||||||||||||||||| | |||||    
T  48510967 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattatctcaaactcaattcaatcaaaatcaattctcgccgccgccatacc 48511066  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  48511067 aaacacacactt 48511078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 42850286 - 42850175
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||| ||||| || ||| ||||||||||||||||||||||||||| || | |||||    
T  42850286 gtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgccaccgccatacc 42850187  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  42850186 aaacacacactt 42850175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 11023396 - 11023289
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| || || || | |||||    
T  11023396 gtatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgccatacc 11023298  T
Q  101 aaacacaca 109  Q
    |||||||||    
T  11023297 aaacacaca 11023289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 6166169 - 6166279
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||  | |||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||| || || | |||||    
T  6166169 gtatccaaacataa-tcaattcagatcaaactcacttctaaccaaaatcaattctctcaaattcaattctatcaaaatcaattctcaccaccgcgatacc 6166267  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  6166268 aaacacacactt 6166279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 31223433 - 31223544
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||||| || || | | |||    
T  31223433 gtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctattaaaatcaattctccccaccgccaaacc 31223532  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  31223533 aaacacacactt 31223544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 50977407 - 50977296
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||||| ||||||||   ||||||||||||||||||||| |||||| | ||| || |||||||||||||||||||||||| || | |||||    
T  50977407 gtatccaaacataaaacaattcacaccaaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaattctcgccaccgccatacc 50977308  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  50977307 aaacacacactt 50977296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 26058302 - 26058410
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaa 102  Q
    ||||||||||||||||||| || |  || |||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||||| || | |||||||    
T  26058302 atccaaacataaatcaatttacatctaattcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgccataccaa 26058401  T
Q  103 acacacact 111  Q
    |||||||||    
T  26058402 acacacact 26058410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 27801717 - 27801609
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaa 102  Q
    ||||||||||||||||||| || |  ||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||||| ||   |||||||    
T  27801717 atccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgtcataccaa 27801618  T
Q  103 acacacact 111  Q
    |||||||||    
T  27801617 acacacact 27801609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 7826417 - 7826310
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaac 104  Q
    |||||||||||||||||||| | || |||||||||||||||||| |||||||| ||| ||||||||||||||||||||| || || || | | |||||||    
T  7826417 ccaaacataaatcaattcacatcaagctcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattttctccaccgccaaaccaaac 7826318  T
Q  105 acacactt 112  Q
    ||||||||    
T  7826317 acacactt 7826310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 10470649 - 10470758
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| |||||| || || ||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||||| || |  ||||    
T  10470649 gtatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccctacc 10470747  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  10470748 aaacacacact 10470758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 13056056 - 13056166
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||| |||||||||||||||||||  | |||||||||||||||||||| |||||| | ||| || |||||||||||||||||| ||||| || | |||||    
T  13056056 gtattcaaacataaatcaattcacactcaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaattatcgccaccgccatacc 13056155  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  13056156 aaacacacact 13056166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 43728943 - 43728834
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    ||||||||||||| ||||||||| |  ||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||||| ||  | ||||||||    
T  43728943 tatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattctatcaaaatcaattctctccatcgctatacca 43728845  T
Q  102 aacacacactt 112  Q
    |||||||||||    
T  43728844 aacacacactt 43728834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 47123445 - 47123555
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||| |||||||||||| |  ||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||| | ||| || | |||||    
T  47123445 gtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaatttttgccaccgccatacc 47123544  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  47123545 aaacacacact 47123555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 50406191 - 50406300
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaa 102  Q
    ||||||||| |||||||||||| |  ||||||||||||| |||||| || ||| | ||| |||||| |||||||||||||||||||| || |||||||||    
T  50406191 atccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaaatctttcaaactcaattttatcaaaatcaattctcgccaccgctataccaa 50406290  T
Q  103 acacacactt 112  Q
    ||||||||||    
T  50406291 acacacactt 50406300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 5410698 - 5410806
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||| |||||||||||||||| || |  ||||||||||||| |||||| |||||| | |||||||||| ||||||||||||||||||||||| | | |||    
T  5410698 gtattcaaacataaatcaatttacatccaactcacttttaatcaaaatcaattctttcaaattcaattatatcaaaatcaattctcgccgccgccaaacc 5410797  T
Q  101 aaacacaca 109  Q
    |||||||||    
T  5410798 aaacacaca 5410806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 6464679 - 6464775
Alignment:
Q  14 aatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacacacac 110  Q
    ||||||||||| ||||||||||||||||||||||| || || || ||| |||||| |||||||||||||||||| | ||||||||||||||| ||||    
T  6464679 aatcaattcacattaaactcacttttaaccaaaatgaactcactcaaactcaattatatcaaaatcaattctcgtcaccactataccaaacaaacac 6464775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 25230066 - 25230173
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||| || |||||||||||||| ||||| |||||||| ||| ||| ||||||||||||||||||||||| ||   |||||    
T  25230066 gtatccaaacataa-tcaattcacattcaactcacttttaactaaaatcaattctctcaaactcagttctatcaaaatcaattctcgccaccgtcatacc 25230164  T
Q  101 aaacacaca 109  Q
    |||||||||    
T  25230165 aaacacaca 25230173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 40229537 - 40229455
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||    ||| |||||||||||||||||||||    
T  40229537 gtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattccaacaaaatcaattctatcaaaatcaatt 40229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 15884286 - 15884371
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||| |||||| | ||| |||| |||||||||||||||||||    
T  15884286 gtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctgtcaaactcaactctatcaaaatcaattctc 15884371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 12468271 - 12468380
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||| ||||||||||| || | ||||||||||||||||||||| |||| | | ||| ||||||||||| |||||||||||  ||||| | |||||    
T  12468271 gtatccaaatataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatc-aaatcaattcttcccgccgccatacc 12468369  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  12468370 aaacacacact 12468380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 34718510 - 34718592
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||| |||||||||||||||| |  | |||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  34718510 gtattcaaacataaatcaatttatatcaaactcacttttaaccaaaattaattatctcaaactcaattctatcaaaatcaatt 34718592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 40352451 - 40352534
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    ||||||||||||||||| || || ||||||||||||||||||||||| ||||| |  ||| ||||||||||||||||||||||||    
T  40352451 tatccaaacataaatcactttacattaaactcacttttaaccaaaatcaattc-cacaaaatcaattctatcaaaatcaattctc 40352534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 45710108 - 45710211
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||| ||||||||| ||||||||| |  ||||||||||||| |||||| ||||| || ||| ||||||||||||||||||||| ||||| || |||||||    
T  45710108 gtattcaaacataa-tcaattcacatacaactcacttttaatcaaaatcaattcactcaaactcaattctatcaaaatcaattatcgccaccgctatacc 45710206  T
Q  101 aaaca 105  Q
    |||||    
T  45710207 aaaca 45710211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 49243049 - 49242964
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    |||| ||||||||||||||||||| |  |||||| ||||||||||||| |||||||| ||| |||||| ||||||||| |||||||    
T  49243049 gtattcaaacataaatcaattcacatccaactcatttttaaccaaaatcaattctctcaaactcaattatatcaaaattaattctc 49242964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 4347033 - 4347114
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||| || || || |||||||||||||||||||| ||||||  |||| ||||||||| |||||||||||    
T  4347033 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattctacaaaa-tcaattctaccaaaatcaatt 4347114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 12247506 - 12247588
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacacacact 111  Q
    |||||||||||||||| ||| |||||||| ||| |||||||||| |||||||||| ||  | || ||||||||||||||||||    
T  12247506 aactcacttttaaccagaatcaattctcttaaactcaattctattaaaatcaattttcatcaccgctataccaaacacacact 12247588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 11561886 - 11561948
Alignment:
Q  6 caaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaatt 68  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||| | ||| ||||||    
T  11561886 caaatataaatcaattcacattcaactcacttttaaccaaaattaattctttcaaactcaatt 11561948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 13344836 - 13344913
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||| || || || |||||||||||||||||||| ||||||  |||| ||||||| |||||||||||||    
T  13344836 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattctacaaaa-tcaattcaatcaaaatcaatt 13344913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 35536146 - 35536240
Alignment:
Q  17 caattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacacacact 111  Q
    |||||||| | ||| |||||||||| ||||||||||||||| ||| |||||||||| ||||| |||| ||  | || | ||||||||||||||||    
T  35536146 caattcacgtcaaagtcacttttaatcaaaattaattctctcaaactcaattctattaaaattaattttcatcaccgccataccaaacacacact 35536240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 43134537 - 43134595
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcg 87  Q
    |||||||||||||||||||| |||||||| ||| ||||||||||| |||| ||||||||    
T  43134537 aactcacttttaaccaaaatcaattctcttaaactcaattctatccaaataaattctcg 43134595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 29441271 - 29441327
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    ||||||||| |||||||||| ||||| || ||| |||||||||||||||||||||||    
T  29441271 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 29441327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 291784 - 291729
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctc 56  Q
    ||||||||||||||| ||||||| || |||||||||||||| |||||| |||||||    
T  291784 gtatccaaacataaaccaattcatctcaaactcacttttaatcaaaatcaattctc 291729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 4369865 - 4369803
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaatt 68  Q
    |||||||||||||||||||| | || |||||||||||||||||| |||||||| ||| ||||||    
T  4369865 ccaaacataaatcaattcacatcaa-ctcacttttaaccaaaatcaattctctcaaaatcaatt 4369803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 47981862 - 47981756
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||| || |  || |||||| |||||||||||||||||| |  |||| |||||| ||| |||||||||||||| | ||||   |||    
T  47981862 gtatccaaacataaatcactttaaattcaactcaattttaaccaaaattaattttacaaaa-tcaattttattaaaatcaattctcgtcaccacacaacc 47981764  T
Q  101 aaacacac 108  Q
    ||||||||    
T  47981763 aaacacac 47981756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 25061285 - 25061367
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||||||| |  || |||||||||||||||||||| |||||    ||| |||||| || |||||||||||    
T  25061285 gtatccaaacataaatcaatttatgttcaactcacttttaaccaaaatcaattcaaccaaaatcaattttaacaaaatcaatt 25061367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 41989 - 42066
Alignment:
Q  6 caaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||||| || ||||||| ||| || ||||| ||||||   ||| |||||| ||||||||||||||    
T  41989 caaacataaatcaattcacgttcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 13931683 - 13931790
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    ||||||||||||| ||||||||| | ||||||| |||||| |||||| |||| |   ||| ||||||||||||||||||| || | || || | ||||||    
T  13931683 tatccaaacataa-tcaattcacatcaaactcatttttaaacaaaatcaatttttggaaactcaattctatcaaaatcaa-tcccaccaccgccatacca 13931780  T
Q  102 aacacacact 111  Q
    ||||||||||    
T  13931781 aacacacact 13931790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 291744 - 291704
Alignment:
Q  71 atcaaaatcaattctcgccgccactataccaaacacacact 111  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  291744 atcaaaatcaattctcgccaccaccataccaaacacacact 291704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 47085898 - 47085961
Alignment:
Q  7 aaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattct 70  Q
    |||||||||||||||||| || |||||||||||||  ||||| |||||| | ||| ||||||||    
T  47085898 aaacataaatcaattcacattcaactcacttttaattaaaatcaattctatcaaaatcaattct 47085961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 30557624 - 30557677
Alignment:
Q  32 tcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    ||||||||||||||||| ||||||  | ||| |||||||||||||||||||||||    
T  30557624 tcacttttaaccaaaatcaattctacagaat-caattctatcaaaatcaattctc 30557677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 107
Target Start/End: Original strand, 9447604 - 9447696
Alignment:
Q  14 aatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacaca 107  Q
    |||| |||||| | |||||||||||||||||||   | |||||| |||||||||| ||| |||||||||||||  | || | ||||||||||||    
T  9447604 aatccattcacatcaaactcacttttaaccaaacc-atttctctcaaattcaattttattaaaatcaattctcttcaccgccataccaaacaca 9447696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 16556295 - 16556362
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattct 70  Q
    ||||||||||||||||| |||| || ||  ||||||||||||||||| |||| | | ||||||||||||    
T  16556295 tatccaaacataaatcacttcatctcaat-tcacttttaaccaaaatcaattatgtcaaattcaattct 16556362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29759710 - 29759762
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    |||||||||||||||||| || || || |||||||||||||||| ||| ||||    
T  29759710 gtatccaaacataaatcattttacattcaactcacttttaaccataatcaatt 29759762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 108
Target Start/End: Complemental strand, 36447736 - 36447637
Alignment:
Q  8 aacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacaca 107  Q
    ||||||||||| || ||  | ||||||||||| | |||||| ||||||  |||||| ||||| ||||||||||||| || |||||||   ||||||||||    
T  36447736 aacataaatcactttactcttaactcacttttgatcaaaatcaattctacaaaatt-aattcaatcaaaatcaattttcaccgccacagaaccaaacaca 36447638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43730111 - 43730059
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    ||||||||||| ||||||||| ||  | |||||||||||||||||||| ||||    
T  43730111 gtatccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaatt 43730059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48002434 - 48002391
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaa 45  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||    
T  48002434 gtatccaaacataaatcaatt-acgttaaactcaattttaaccaa 48002391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 1945103 - 1944992
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| ||||| | |||||    
T  1945103 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccgccgccatacc 1945004  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  1945003 aaacacacactt 1944992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 2215296 - 2215406
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||  |||||||||||||||||||||||| |  || |||||||    
T  2215296 gtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaagctcaattctatcaaaatcaattctcacaaccgctatacc 2215395  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  2215396 aaacacacact 2215406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 44619125 - 44619014
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||  |  |||| |    
T  44619125 gtatccaaacataaatcaattcccctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccatcggtatatc 44619026  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  44619025 aaacacacactt 44619014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2213550 - 2213659
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || ||||||||||| | |||||| |||||||| ||| |||||||||||||||||||||||| || || |||||||    
T  2213550 gtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctatacc 2213649  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  2213650 aaacacacac 2213659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 5916305 - 5916195
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| ||| | |||||||||||||||||||||| ||||| | |||||    
T  5916305 gtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaattctccccgccgccatacc 5916207  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  5916206 aaacacacactt 5916195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 36312321 - 36312430
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| ||| | |||||||||||||||||||||| ||||| | |||||    
T  36312321 gtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaattctccccgccgccatacc 36312419  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  36312420 aaacacacact 36312430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7472737 - 7472629
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| ||   |||||    
T  7472737 gtatccaaacataa-tcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgtcatacc 7472639  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  7472638 aaacacacac 7472629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28127351 - 28127242
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || ||||||||||| | |||||| |||||||| ||| | |||||||||||||||||||||| || || |||||||    
T  28127351 gtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactaaattctatcaaaatcaattctccccaccgctatacc 28127252  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  28127251 aaacacacac 28127242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 30007613 - 30007532
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  30007613 ccaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctc 30007532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 31562747 - 31562641
Alignment:
Q  4 tccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaa 103  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||| |||||||| ||| |||||| |||||||||||||||||||| |||| ||||||||    
T  31562747 tccaaacataa-tcaattcacctcaaattcacttttaaccaaaatcaattctctcaaactcaattttatcaaaatcaattctcgccaccaccataccaaa 31562649  T
Q  104 cacacact 111  Q
    ||| ||||    
T  31562648 cacgcact 31562641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 36548243 - 36548354
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| | | |||||||||||| |||||| |||||||| ||| ||||||||||||||||||||| || || || | |||||    
T  36548243 gtatccaaacataaatcaattcacatcagactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgccatacc 36548342  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  36548343 aaacacacactt 36548354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9988565 - 9988455
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| |  |||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||| || || | | |||    
T  9988565 gtatccaaacataaatcaattcacatccaactcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgccaaacc 9988466  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  9988465 aaacacacact 9988455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 32502030 - 32502137
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| || |  || | |||||    
T  32502030 gtatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttcacgaccgccatacc 32502128  T
Q  101 aaacacaca 109  Q
    |||||||||    
T  32502129 aaacacaca 32502137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 7296199 - 7296309
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||| |||||||| ||| |||||| ||||||| |||||| ||| |||||| |  ||    
T  7296199 gtatccaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaattatatcaaagtcaattatcggcgccaccaatcc 7296298  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  7296299 aaacacacact 7296309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2213691 - 2213776
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    ||||||||| | |||||||||||| | ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  2213691 gtatccaaagacaaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctc 2213776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34433370 - 34433285
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||| |||||| | ||| ||||||||||||||||||||||||    
T  34433370 gtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattctc 34433285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 8170357 - 8170467
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| |||||| || || ||||||||||||| |||||| |||||||| ||| |||||||||||||||| |||||||||| || |  ||||    
T  8170357 gtatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaattaattctcgccaccgccctacc 8170455  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  8170456 aaacacacactt 8170467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 14821207 - 14821317
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||| || ||| |||||||||||||||| |||| ||| | || |||||||    
T  14821207 gtatccaaacataa-tcaattcacattaaactcacttttaactaaaatcaattcactcaaactcaattctatcaaaattaattatcgtcaccgctatacc 14821305  T
Q  101 aaacacacactt 112  Q
    ||||||| ||||    
T  14821306 aaacacatactt 14821317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 23358302 - 23358412
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||  | |||| || |||||||||||||| |||||| |||||||| ||| ||||||||||  |||||||||||||||  ||| |||||    
T  23358302 gtatccaaacataaactatttcatctcaaactcacttttaatcaaaatcaattctctcaaactcaattctat-taaatcaattctcgccaacaccatacc 23358400  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  23358401 aaacacacactt 23358412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 41580774 - 41580691
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattc 84  Q
    |||||||||||||||| |||| || | ||||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||    
T  41580774 gtatccaaacataaattaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattcgatcaaaatcaattc 41580691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 31224725 - 31224806
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||||||||| |  |||||||||||||| ||||| |||||| | ||| |||||||||||||||||||||    
T  31224725 tatccaaacataaatcaattcacatccaactcacttttaactaaaatcaattctttcaaactcaattctatcaaaatcaatt 31224806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 42089591 - 42089510
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||||||||| || ||||||||||||| |||||| ||||||||  || | |||||||||||||||||||    
T  42089591 tatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctcttgaacttaattctatcaaaatcaatt 42089510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 45714732 - 45714648
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    |||||||||||||||||||||||| |  |||||| |||||| |||||| |||||||| ||| |||||| ||||||||||||||||    
T  45714732 gtatccaaacataaatcaattcacatcgaactcatttttaatcaaaatcaattctctcaaactcaattatatcaaaatcaattct 45714648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3853944 - 3854031
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgc 88  Q
    ||||||||||||||||||||| || || ||||||||||||| |||||| |||||| | ||| ||||||| |||||| |||||||||||    
T  3853944 gtatccaaacataaatcaatttacattcaactcacttttaatcaaaatcaattctatcaaaatcaattccatcaaactcaattctcgc 3854031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7295412 - 7295321
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgcc 92  Q
    ||||||||||||||||||||| || | ||||||| ||||||||| ||| |||||||| ||| |||||||||||||||| |||| ||| ||||    
T  7295412 gtatccaaacataaatcaatttacgtcaaactcatttttaaccagaatcaattctctcaaactcaattctatcaaaattaattatcgacgcc 7295321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 25747945 - 25747864
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||||||| || || ||||||||||||| |||||| |||||||| ||| |||||||||||||| ||||||    
T  25747945 gtatccaaacataaatcaatt-acattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaactcaatt 25747864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 18511146 - 18511231
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    ||||||||||||||||||||| || || || ||||||||||||||||| |||| | | ||| |||||| |||||||||||||||||    
T  18511146 gtatccaaacataaatcaattaacatttaaatcacttttaaccaaaatcaattatatcaaaatcaattttatcaaaatcaattctc 18511231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26207993 - 26207884
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||| |||||||||||||||||| |  |||| ||||||||||||||  |||||||| ||| | ||||||||||||||||||| ||| | ||   |||||    
T  26207993 gtatcaaaacataaatcaattcacatccaactgacttttaaccaaaaccaattctctcaaaattaattctatcaaaatcaattttcgtcaccgtcatacc 26207894  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  26207893 aaacacacac 26207884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39141533 - 39141425
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||  |  |||||||||||||||||||| |||||| | ||| |||||| |||||||||||||||||||| || |   |||    
T  39141533 gtatccaaacataa-tcaattcatatccaactcacttttaaccaaaatcaattctttcaaactcaattatatcaaaatcaattctcgccaccgcccaacc 39141435  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  39141434 aaacacacac 39141425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 16467131 - 16467214
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    |||||||||||||||||||| || |  |||||||||||||||||||| |||| |   ||| |||||||||||||||||||||||    
T  16467131 tatccaaacataaatcaatttacatctaactcacttttaaccaaaatcaattatgccaaaatcaattctatcaaaatcaattct 16467214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 38600507 - 38600424
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattc 84  Q
    |||| |||||||||||||||| || | ||||||||||||||||||||| |||||||| ||| | ||||| |||||||| |||||    
T  38600507 gtattcaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaacttaattcgatcaaaattaattc 38600424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 42516027 - 42515936
Alignment:
Q  14 aatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaaca 105  Q
    ||||||||||| | ||||||||||||||| ||||| |||||||| ||| |||||| |||||||||||||| || || || | ||||||||||    
T  42516027 aatcaattcacatcaaactcacttttaactaaaatcaattctctcaaactcaattatatcaaaatcaattttctccaccgccataccaaaca 42515936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 28261338 - 28261423
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    ||||||||| |||||||||||||| |  ||||||||||||| |||||| |||||||| ||| |||||| ||| ||||| |||||||    
T  28261338 gtatccaaatataaatcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattgtattaaaattaattctc 28261423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 27911451 - 27911517
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaatt 68  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| | |||||| | ||| ||||||    
T  27911451 tatccaaacataaatcaattcacatcaaactcacttttaaccaaactcaattctatcaaaatcaatt 27911517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23377548 - 23377600
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    ||||||||||||||||||| | || || |||||||||||||||||||||||||    
T  23377548 gtatccaaacataaatcaacttacattcaactcacttttaaccaaaattaatt 23377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 12110918 - 12111028
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||| || |  || |||||||||||||||||||| |||| |   ||| ||||||||||||||||||||| ||| | || |   |||    
T  12110918 gtatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt-tgacaaaatcaattctatcaaaatcaattttcgtcaccgcacaacc 12111016  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  12111017 aaacacacactt 12111028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 23267400 - 23267345
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattc 84  Q
    ||||||||| |||||||||| ||||| || ||| ||||||||||||||||||||||    
T  23267400 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 23267345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23359994 - 23359940
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct 55  Q
    |||||||||||||||||| || || || |||||||||||||||||||| ||||||    
T  23359994 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 23359940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 28641690 - 28641768
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||| |||||||||||||| |  ||||||| |||||||||||| |||||||| | | ||||||| || ||||||||||    
T  28641690 ccaaatataaatcaattcacatccaactcacatttaaccaaaatcaattctctcagaatcaattcaattaaaatcaatt 28641768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 8041325 - 8041397
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaa 76  Q
    ||||||||||||||||||| || || || |||||||||  |||||| |||||||| ||| ||||||||||||||    
T  8041325 atccaaacataaatcaatt-acattcaattcacttttattcaaaatcaattctctcaaactcaattctatcaaa 8041397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 43858274 - 43858194
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||||   | | |||||||||||  ||||||| |||||  | ||| |||||||||||||||||||||    
T  43858274 atccaaacataaatcaattattcatcaactcacttttgcccaaaatcaattcaattaaaatcaattctatcaaaatcaatt 43858194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 5055238 - 5055292
Alignment:
Q  26 ttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaa 81  Q
    ||||||||||||||||||||||| ||||||  |||||| ||||| |||||||||||    
T  5055238 ttaaactcacttttaaccaaaatcaattctgcaaaatt-aattcaatcaaaatcaa 5055292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1763264 - 1763349
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcg 87  Q
    ||||| |||||||||||| || |  || |||||| ||||||||||||| |||| |  |||| |||||| ||||||||||||||||||    
T  1763264 gtatctaaacataaatcactttaaattcaactcaattttaaccaaaatcaattttacaaaa-tcaattttatcaaaatcaattctcg 1763349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 26806319 - 26806238
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||| ||  |  | ||||||||||||| |||||| |||||| ||||||| ||||| | |||||||||||    
T  26806319 gtatccaaacataaatcacttttcactcaactcacttttaatcaaaatcaattctgtaaaatt-aattcaaccaaaatcaatt 26806238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30599968 - 30599914
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct 55  Q
    ||||||||||| ||||||||| ||  | |||||||||||||||||||| ||||||    
T  30599968 gtatccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaattct 30599914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 27911497 - 27911545
Alignment:
Q  63 tcaattctatcaaaatcaattctcgccgccactataccaaacacacact 111  Q
    ||||||||||||||||||||| |||||||| |   ||||||||||||||    
T  27911497 tcaattctatcaaaatcaattatcgccgccgccgaaccaaacacacact 27911545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 33019119 - 33019070
Alignment:
Q  32 tcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||| |||||| |||||  ||||||| ||||||||||||    
T  33019119 tcacttttaaccaaaatcaattctataaaa--caattctgtcaaaatcaatt 33019070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 43436305 - 43436265
Alignment:
Q  71 atcaaaatcaattctcgccgccactataccaaacacacact 111  Q
    ||||||||||||||||||| || | ||||||||||||||||    
T  43436305 atcaaaatcaattctcgccaccgccataccaaacacacact 43436265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 50664793 - 50664903
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| || | |||||    
T  50664793 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccatacc 50664892  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  50664893 aaacacacact 50664903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 23496352 - 23496462
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||  |||| | |||||    
T  23496352 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcctcgccgccatacc 23496451  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  23496452 aaacacacact 23496462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 10853332 - 10853224
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| || || ||||||||    
T  10853332 tatccaaacataaatcaatttatattaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgctatacca 10853233  T
Q  102 aacacacac 110  Q
    |||||||||    
T  10853232 aacacacac 10853224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 38125507 - 38125397
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||||| |||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||| | || | |||||    
T  38125507 gtatccaaacataa-tcaattcacctcaaacccacttttaaccaaaatcaattctctcaaattcaattctatcaaaatcaattctcgtcaccgccatacc 38125409  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  38125408 aaacacacactt 38125397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 26519699 - 26519808
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || ||||||||||| | |||||| |||||||| ||| |||||||||||||||||||||||| || || |||||||    
T  26519699 gtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctatacc 26519798  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  26519799 aaacacacac 26519808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42318365 - 42318473
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| ||| | || |||||||    
T  42318365 gtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatcgtcaccgctatacc 42318463  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  42318464 aaacacacac 42318473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4984616 - 4984726
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||| |||| ||| |||||||||| ||||||||||||||||| || || | |||||    
T  4984616 gtatccaaacataaatcaattcacatctaactcacttttaaccaaaatcaattttctcaaattcaattatatcaaaatcaattctccccaccgccatacc 4984715  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  4984716 aaacacacact 4984726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 3348278 - 3348388
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||||||||||| || |  ||||||||| |||||||||| ||||| || ||| ||||||||||||||||||||||||||| || |||| ||    
T  3348278 gtatccaaacataaatcaatttacatccaactcacttctaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgccaccgctatgcc 3348377  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  3348378 aaacacacact 3348388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 10334173 - 10334283
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||  || |||| ||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | || | ||| |    
T  10334173 gtatccaaacataaatcaattcatattcaactgacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgtcaccgccatatc 10334272  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  10334273 aaacacacact 10334283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 44939481 - 44939372
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||  || ||||||||||||| |||||| ||||| || ||||||||||||||||||||||||| ||||| || |||||||    
T  44939481 gtatccaaacataa-tcaattcatattcaactcacttttaatcaaaatcaattcactcaaattcaattctatcaaaatcaattatcgccaccgctatacc 44939383  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  44939382 aaacacacact 44939372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21225025 - 21225133
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||| ||||||| || | ||||||||||||||||||||| |||||||| ||| ||||||||||  | |||||||||||||||| ||| |||    
T  21225025 gtatccaaacatatatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatagagatcaattctcgccgccgctaaacc 21225124  T
Q  101 aaacacaca 109  Q
    |||||||||    
T  21225125 aaacacaca 21225133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 55154537 - 55154647
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||| |||||||| ||||||||| || |||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||||||| |  | |||||    
T  55154537 gtatctaaacataa-tcaattcacattcaactcacttttaactaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccactgccatacc 55154635  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  55154636 aaacacacactt 55154647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 30811597 - 30811488
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||| || ||||||||||||| |||||| |||||||| |||||||||| |||||||||||||||||| | || |  ||||    
T  30811597 gtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattctctcaaattcaattatatcaaaatcaattctcgtcaccgccctacc 30811499  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  30811498 aaacacacact 30811488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 38172373 - 38172263
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| |   ||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||||| || || | | |||    
T  38172373 gtatccaaacataaatcaattcacatcccactcacttttaaccaaaatcaattctctcaaactcaattctattaaaatcaattctccccaccgccaaacc 38172274  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  38172273 aaacacacact 38172263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 52966871 - 52966765
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaac 104  Q
    |||||||||||||||||||| | ||| ||||||||||||||||| |||||||| ||| ||||||||||||||||||||| || || || | | |||||||    
T  52966871 ccaaacataaatcaattcacatcaaagtcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattttctccacctccaaaccaaac 52966772  T
Q  105 acacact 111  Q
    |||||||    
T  52966771 acacact 52966765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 53074938 - 53075046
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||| |||||| |||||||||||||| || ||||| |  || |    
T  53074938 gtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattttcaccgccgccgtatc 53075036  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  53075037 aaacacacac 53075046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 15511442 - 15511331
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||||||||||||||    |||||||||||||||||||| |||||| | ||| ||  ||||||||||||||||| ||||| || | |||||    
T  15511442 gtatccaaacataaatcaattcacacccaactcacttttaaccaaaatcaattctttcaaactccgttctatcaaaatcaattatcgccaccgccatacc 15511343  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  15511342 aaacacacactt 15511331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 48189507 - 48189397
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| |||||| || || ||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||| ||||| || |  ||||    
T  48189507 gtatccaaacataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattatcgccaccgccctacc 48189409  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  48189408 aaacacacactt 48189397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 35425369 - 35425454
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcg 87  Q
    |||||||||||||| ||||||||| || ||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||||||    
T  35425369 gtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcg 35425454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 38340841 - 38340949
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||| |||||| | ||| |  ||||||||||||||||||||| ||  | | ||||||    
T  38340841 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctttcaaacttcattctatcaaaatcaattctcaccaacgccatacca 38340940  T
Q  102 aacacacac 110  Q
    |||||||||    
T  38340941 aacacacac 38340949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 8424795 - 8424689
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||| |||||||| ||| |||||||||||||| |||||| |  || || ||||||     
T  8424795 gtatccaaacataa-tcaattcacgttcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaattcaattatgaccaccgctatact 8424697  T
Q  101 aaacacac 108  Q
    ||||||||    
T  8424696 aaacacac 8424689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 35930773 - 35930876
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||| ||||||||||||||  | ||||||||||||||  ||||| |||||||| ||| |||||||||||||||||||||||| || ||  ||||||    
T  35930773 gtatccaagcataaatcaattcatatcaaactcacttttaataaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgatatacc 35930872  T
Q  101 aaac 104  Q
    ||||    
T  35930873 aaac 35930876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 53179883 - 53179958
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaa 76  Q
    ||||||||||||||||||||| || | ||||||||||||||||||||| |||| | ||||| ||||||||||||||    
T  53179883 gtatccaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattatataaaactcaattctatcaaa 53179958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 34561143 - 34561225
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||||||| | || |||||||||||||||||||| |||| | | ||| | |||||||||||||||||||    
T  34561143 gtatccaaacataaatcaattcgcattcaactcacttttaaccaaaatcaattttatcaaacttaattctatcaaaatcaatt 34561225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 42475744 - 42475830
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcg 87  Q
    |||| |||||| |||||||||||| |  ||||||||||||| |||||| |||||||| ||| |||||||||| ||||||||||||||    
T  42475744 gtattcaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctataaaaatcaattctcg 42475830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 44224797 - 44224907
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||  | ||||||||||||||||| ||| |||| ||| ||| ||||||||| |  ||||||||||| ||||| | | |||    
T  44224797 gtatccaaacataaatcaattcatatcaaactcacttttaaccataatcaattatctcaaactcaattctaccggaatcaattctccccgccgccaaacc 44224896  T
Q  101 aaacacacact 111  Q
    ||||| |||||    
T  44224897 aaacaaacact 44224907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 20813182 - 20813290
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    |||||||||| |||||||||||  |  ||||||||||||||||||   |||||||| ||| ||| |||||||||||||||||||| || ||  |||||||    
T  20813182 tatccaaacaaaaatcaattcaaatccaactcacttttaaccaaacacaattctctcaaactca-ttctatcaaaatcaattctctccaccgatatacca 20813280  T
Q  102 aacacacact 111  Q
    ||||||||||    
T  20813281 aacacacact 20813290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25848067 - 25848136
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattct 70  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||||||||| ||| ||| ||||||||    
T  25848067 gtatccaaacataaatcaattcatattaaactcactttttaccaaaattaattttctcaaactcaattct 25848136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 23207134 - 23207046
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgcc 89  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||| |||| |   ||| |||||| |||||||||||||| |||||    
T  23207134 gtatccaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattataacaaaatcaattatatcaaaatcaattttcgcc 23207046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 29716742 - 29716674
Alignment:
Q  11 ataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatc 79  Q
    |||||||||||||  || |||||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  29716742 ataaatcaattcatatttaactcacttttaaccaaaatcaattctctcaaattcaattttatcaaaatc 29716674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 19877453 - 19877543
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgcc 92  Q
    |||| ||||||||||||||| || |  |||||||||||||||||||| |||||| | ||| |||||||||||||||| |||| ||| ||||    
T  19877453 tatctaaacataaatcaatttacatccaactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaataaattttcgtcgcc 19877543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 44225600 - 44225709
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||| || || ||||||||||||||||| ||||| ||||||  |||| |||||| ||| |||||||||| || || ||||   |||    
T  44225600 gtatccaaacataaatcactttacattaaactcacttttaacgaaaatcaattctacaaaa-tcaattatattaaaatcaattttctccaccacacaacc 44225698  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  44225699 aaacacacact 44225709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31084242 - 31084311
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattct 70  Q
    |||||||||||||||||||||||| || ||||||||||||| |||||| |||||| | ||| ||||||||    
T  31084242 gtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctttcaaaatcaattct 31084311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 109
Target Start/End: Complemental strand, 16246157 - 16246054
Alignment:
Q  4 tccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaa 103  Q
    |||||||||||||||||| || |  |||||||||||||| ||||| |||||||  ||| |||||||||| || ||||||||||||  || | | ||||||    
T  16246157 tccaaacataaatcaatttacatctaactcacttttaactaaaatcaattctc--aaactcaattctattaatatcaattctcgctaccgccaaaccaaa 16246060  T
Q  104 cacaca 109  Q
    ||||||    
T  16246059 cacaca 16246054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 25181245 - 25181328
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    |||||||||||||||| | || || |||||||||||||||| |||||| ||||||  |||| ||||||| ||||| |||||||||    
T  25181245 gtatccaaacataaataattttacattaaactcacttttaatcaaaatcaattctacaaaa-tcaattcaatcaatatcaattct 25181328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 40415361 - 40415277
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    ||||||||||||||| |||| || |  |||||||||||||| |||||  ||||  | ||| ||||||||||||||||||||||||    
T  40415361 tatccaaacataaattaatttacatccaactcacttttaactaaaatcgattcctttaaactcaattctatcaaaatcaattctc 40415277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 31766241 - 31766159
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattc 84  Q
    |||||||||||||||||| || | ||| |||||||||||| |||||||||||| |  |||| |||||||  |||||||||||||    
T  31766241 gtatccaaacataaatcactttaacttcaactcacttttatccaaaattaattttacaaaa-tcaattcattcaaaatcaattc 31766159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7012675 - 7012729
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct 55  Q
    |||||||||||||||||| || || || |||||||||||||||||||| ||||||    
T  7012675 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 7012729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 23918881 - 23918931
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct 55  Q
    |||||||||||||| || || || |||||||||||||||||||||||||||    
T  23918881 ccaaacataaatcactttacattcaactcacttttaaccaaaattaattct 23918931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 35930876 - 35930934
Alignment:
Q  54 ctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacacacactt 112  Q
    |||| ||| |||||||||||||||||||||||| || ||| ||||||||||||| ||||    
T  35930876 ctctcaaactcaattctatcaaaatcaattctcaccaccagtataccaaacacagactt 35930934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 52813278 - 52813332
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||| |||||||||| ||||| || ||| |||||||||||||||||||||    
T  52813278 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 52813332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 42644298 - 42644382
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    ||||||||||||||||| || || || |||||||||||||| ||||| |||| |   ||| |||||||  |||||||||||||||    
T  42644298 tatccaaacataaatcactttacattcaactcacttttaactaaaatcaatttttataaaatcaattcactcaaaatcaattctc 42644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 49526735 - 49526651
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    ||||||||||||||||||||| ||  | || |||||||||| |||||| |||||| | ||| ||||||  |||||| ||||||||    
T  49526735 gtatccaaacataaatcaatttacaatcaattcacttttaatcaaaatcaattctatcaaaatcaatttcatcaaactcaattct 49526651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 52931638 - 52931586
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    ||||||||||||||||||||| ||  |||||||||||||||| ||||| ||||    
T  52931638 gtatccaaacataaatcaatttacactaaactcacttttaactaaaatcaatt 52931586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21023281 - 21023201
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||| |||||||||||| ||||  || ||||||| |||||||||||| |||  | || || |||||||||||||||||||||    
T  21023281 gtatctaaacataaatcacttcaaattcaactcacatttaaccaaaatcaat--tttacaaatcaattctatcaaaatcaatt 21023201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 13778811 - 13778766
Alignment:
Q  270 tacatacatacatgtgaatatacaatatacaaactttgttcatatt 315  Q
    ||||||| ||||||||||| ||||||||||| |||| |||||||||    
T  13778811 tacatacgtacatgtgaatttacaatatacacacttcgttcatatt 13778766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 41115355 - 41115251
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    |||||||||||||| || || || || |||||| | ||| ||||||| |||| |  ||||| ||||||  ||| ||||||||||||||||||| | ||||    
T  41115355 tatccaaacataaaccattttacattcaactcattgttagccaaaatcaattatacaaaat-caattcattcataatcaattctcgccgccacaaaacca 41115257  T
Q  102 aacaca 107  Q
    ||||||    
T  41115256 aacaca 41115251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 10852775 - 10852727
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    |||||||||||||| || || || |||||||||||||||||||| ||||    
T  10852775 ccaaacataaatcactttacattcaactcacttttaaccaaaatcaatt 10852727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 273
Target Start/End: Complemental strand, 13793111 - 13793031
Alignment:
Q  193 aaagacaaggttattcttcagcaacatacattaagcttcatctctatataaaggaccaagatttgactaaagaaggttaca 273  Q
    |||||||||||||||||  |||||||  ||| ||||  | |||||||||||| ||||||| ||||  | ||||||||||||    
T  13793111 aaagacaaggttattctctagcaacaatcatcaagccccgtctctatataaaagaccaagttttgcttgaagaaggttaca 13793031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 30810002 - 30809966
Alignment:
Q  10 cataaatcaattcaccttaaactcacttttaaccaaa 46  Q
    ||||||||||||||| || ||||||||||||||||||    
T  30810002 cataaatcaattcacatttaactcacttttaaccaaa 30809966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 38230124 - 38230232
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| | ||| | |||||    
T  38230124 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctcttaaattcaattctatcaaaatcaattctctcggccgccatacc 38230223  T
Q  101 aaacacaca 109  Q
    |||||||||    
T  38230224 aaacacaca 38230232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 37639489 - 37639596
Alignment:
Q  4 tccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaa 103  Q
    ||||||||||||||||||||| || || ||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| ||||| | ||||||||    
T  37639489 tccaaacataaatcaattcacattcaattcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccgccgccataccaaa 37639588  T
Q  104 cacacact 111  Q
    ||||||||    
T  37639589 cacacact 37639596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 39391190 - 39391083
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||  |||| ||||||||||||||||||||| ||||| || | |||||    
T  39391190 gtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctaaaaaaatcaattctatcaaaatcaattttcgccaccgccatacc 39391091  T
Q  101 aaacacac 108  Q
    ||||||||    
T  39391090 aaacacac 39391083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 3622513 - 3622403
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| || | ||| |    
T  3622513 gtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccataac 3622414  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  3622413 aaacacacact 3622403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 48459766 - 48459877
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| ||  |   |||||    
T  48459766 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaacgtcatacc 48459865  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  48459866 aaacacacactt 48459877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 10372007 - 10371901
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaac 104  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| || ||  | ||||||||    
T  10372007 ccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgttttaccaaac 10371908  T
Q  105 acacact 111  Q
    |||||||    
T  10371907 acacact 10371901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 41715715 - 41715822
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaa 102  Q
    ||||||||||||||||||| || |  ||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||||| || | |||||||    
T  41715715 atccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgccataccaa 41715814  T
Q  103 acacacac 110  Q
    ||||||||    
T  41715815 acacacac 41715822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 47021975 - 47022082
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || |||| ||||||||||||||| |||||||| ||| ||||||||||||||||||||| || || |||  |||||    
T  47021975 gtatccaaacataaatcaattcactttcaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatccccaccatcatacc 47022074  T
Q  101 aaacacac 108  Q
    ||||||||    
T  47022075 aaacacac 47022082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 3375546 - 3375652
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||  |||  ||||    
T  3375546 gtatccaaacacaaatcaattcacaccaaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattctctccatcaccgtacc 3375645  T
Q  101 aaacaca 107  Q
    |||||||    
T  3375646 aaacaca 3375652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 37562626 - 37562736
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| |  |||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||| || || | | |||    
T  37562626 gtatccaaacataaatcaattcacatccaactcacttttaacaaaaatcaattctcttaaactcaattctatcaaaatcaattctccccaccgccaaacc 37562725  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  37562726 aaacacacact 37562736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44967452 - 44967365
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgc 88  Q
    |||| ||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||||| |||||||||||||||||||    
T  44967452 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattctcgc 44967365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 47217592 - 47217487
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaa 102  Q
    |||||||||||||||||||||| | |||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||| || ||||| |   |||||    
T  47217592 atccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccgccgccgaaccaa 47217493  T
Q  103 acacac 108  Q
    ||||||    
T  47217492 acacac 47217487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 3342846 - 3342955
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||  |  |||||||||||||| ||||| |||||||| ||| |||||||||||||||| ||||||| || || | | |||    
T  3342846 gtatccaaacataaatcaattcatatccaactcacttttaactaaaatcaattctctcaaactcaattctatcaaaattaattctccccaccgccaaacc 3342945  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  3342946 aaacacacac 3342955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 32186998 - 32187107
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaa 102  Q
    ||||||||||||||||||| || |  ||||||||||||| |||||| |||||||| ||| | ||||||||||||||||||||||||| ||   |||||||    
T  32186998 atccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaattaattctatcaaaatcaattctcgccaccgtcataccaa 32187097  T
Q  103 acacacactt 112  Q
    ||| ||||||    
T  32187098 acatacactt 32187107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 43631747 - 43631642
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    ||||||||||||| ||||||||  |  |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| || || || | ||||||    
T  43631747 tatccaaacataa-tcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatccccaccgccatacca 43631649  T
Q  102 aacacac 108  Q
    |||||||    
T  43631648 aacacac 43631642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 3750742 - 3750827
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||| |||||||| ||| |||||| ||| |||||| ||||||    
T  3750742 gtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattttattaaaatctattctc 3750827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9456161 - 9456245
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||||| ||||||||  || | ||||||||||||||||||||||    
T  9456161 gtatccaaacataa-tcaatttacctcaaactcacttttaaccaaaatcaattctctcgaacttaattctatcaaaatcaattctc 9456245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 39977609 - 39977718
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    |||||||| |||||||||||||  | |||||||||||| || ||||| |||||| | ||| | ||||||||||||||||||| ||||| || | ||||||    
T  39977609 tatccaaaaataaatcaattcatatcaaactcacttttgactaaaatcaattctttcaaactaaattctatcaaaatcaattatcgccaccgccatacca 39977708  T
Q  102 aacacacact 111  Q
    ||||||||||    
T  39977709 aacacacact 39977718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 46541661 - 46541738
Alignment:
Q  6 caaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||| |||||||| || ||||||||| |||||||||| |||||||| ||| |||||||||||||||||||||    
T  46541661 caaacataaaccaattcacattcaactcacttctaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 46541738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 34010423 - 34010505
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacacacactt 112  Q
    |||||||||||||||||||| |||||| | ||| ||||||||||||||||||||||||||| || | | |||||||||||||||    
T  34010423 aactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattctcgccaccgcca-accaaacacacactt 34010505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 34366035 - 34365925
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||||||||||||||    |||| ||||||||| ||||| |||||| | ||| || ||| |||||||||||||||| ||| || | |||||    
T  34366035 gtatccaaacataaatcaattcacacccaactaacttttaactaaaatcaattctttcaaactccattatatcaaaatcaattctagccaccgccatacc 34365936  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  34365935 aaacacacact 34365925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 42752244 - 42752162
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||||||||| || |||||||||||||| ||||| ||||||   ||| |||||||| ||||||||||||    
T  42752244 gtatccaaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaatt 42752162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 48134637 - 48134742
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    ||||||||||||| ||||||| ||| |||| |||||||||| ||||| |||||||| ||| |||||||||||||||| |||| ||||  || | ||||||    
T  48134637 tatccaaacataa-tcaattctcctcaaacccacttttaacaaaaatcaattctctcaaactcaattctatcaaaattaattttcgcaaccgccatacca 48134735  T
Q  102 aacacac 108  Q
    |||||||    
T  48134736 aacacac 48134742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 386533 - 386452
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||||||||| || | || ||||||||||||||| ||| |||| ||| |||||| ||||||||||||||    
T  386533 tatccaaacataaatcaattcacattcagctaacttttaaccaaaatcaatactctcaaactcaattatatcaaaatcaatt 386452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 39634217 - 39634108
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    ||||||||||||||||||||||  || |||||||||||||||||||| ||||||   ||| |||||||| || |||||||||||| || || |   ||||    
T  39634217 tatccaaacataaatcaattcatattcaactcacttttaaccaaaatcaattctaacaaaatcaattctgtccaaatcaattctctccaccgcagaacca 39634118  T
Q  102 aacacacact 111  Q
    ||||||||||    
T  39634117 aacacacact 39634108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 12632131 - 12632051
Alignment:
Q  6 caaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    ||||||||||||||||||| |  ||||||||||||||||||||  ||||||| |||   ||||||||||||||||||||||    
T  12632131 caaacataaatcaattcacatctaactcacttttaaccaaaatctattctctcaaacaaaattctatcaaaatcaattctc 12632051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 19097483 - 19097562
Alignment:
Q  31 ctcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacacacac 110  Q
    ||||||||||| |||||| |||||| | ||| |||||||||||||||| ||||||| ||||| | |||||||||||||||    
T  19097483 ctcacttttaatcaaaatcaattctttcaaactcaattctatcaaaattaattctcaccgccgccataccaaacacacac 19097562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 37008400 - 37008295
Alignment:
Q  4 tccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaa 103  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| |||||    ||| |||||||||| ||||||| || ||||| |  | ||||||||    
T  37008400 tccaaacataaatcaat-cacctcaaactcacttttaaccaaaatcaattccaacaaaatcaattctataaaaatcagttttcgccac--cgataccaaa 37008304  T
Q  104 cacacactt 112  Q
    |||||||||    
T  37008303 cacacactt 37008295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 24770963 - 24770853
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    |||| ||| ||||||||||| || |  |||||||||||||||||||| |||| ||| ||| | |||||||||||||| |||||||| | ||   ||||||    
T  24770963 tatctaaatataaatcaatttacatccaactcacttttaaccaaaatcaattatctcaaacttaattctatcaaaattaattctcgtcaccgtcatacca 24770864  T
Q  102 aacacacactt 112  Q
    ||| |||||||    
T  24770863 aacgcacactt 24770853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 36920231 - 36920141
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgc 91  Q
    |||| |||||||||||||||| |  |  |||||||||||||||||||| |||||| | ||| |||||| ||||||||| ||||||| ||||    
T  36920231 gtattcaaacataaatcaatttatatctaactcacttttaaccaaaatcaattctttcaaactcaattttatcaaaattaattctcaccgc 36920141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 12964659 - 12964736
Alignment:
Q  6 caaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||  || || ||||||||| |||| ||||| |||| ||| ||| |||||||||||||||||||||    
T  12964659 caaacataaatcaatctacattcaactcacttataacgaaaatcaattatctcaaactcaattctatcaaaatcaatt 12964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 20088929 - 20089009
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct-ctaaaattcaattctatcaaaatcaattct 85  Q
    |||||||||||||| || || || |||||||||||||||||||| |||| | || ||| |||||||||||||||||||||||    
T  20088929 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattatacttaaa-tcaattctatcaaaatcaattct 20089009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42904609 - 42904686
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaat 78  Q
    ||||| |||||||||||||||||| |  |||||| ||||| ||||||  |||||||| ||| ||||||||||||||||    
T  42904609 gtatcaaaacataaatcaattcacatctaactcatttttatccaaaaacaattctctcaaactcaattctatcaaaat 42904686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 43737991 - 43737882
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    |||||||||| |||||||||||  |  |||| |||||||| |||||| |||||||| ||| |||||| | | ||||||||||||| ||| | | |||| |    
T  43737991 tatccaaacaaaaatcaattcatatctaactaacttttaatcaaaatcaattctcttaaactcaattatgttaaaatcaattctcaccgtcgccatacta 43737892  T
Q  102 aacacacact 111  Q
    ||||||||||    
T  43737891 aacacacact 43737882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 34011011 - 34010932
Alignment:
Q  4 tccaaacataaatcaattcac-cttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||| |||| || || ||||||||||| ||||||||| |||| ||| ||| |||||||||||||||||||||    
T  34011011 tccaaacataaattaatttacactcaaactcacttt-aaccaaaatcaattttctcaaactcaattctatcaaaatcaatt 34010932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 42740449 - 42740521
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatca 74  Q
    |||| ||||||||||||||| || || |||| ||||||||||||||| |||||||| ||| |||||| |||||    
T  42740449 tatctaaacataaatcaattaacattcaacttacttttaaccaaaatcaattctctcaaactcaattatatca 42740521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 20024372 - 20024294
Alignment:
Q  193 aaagacaaggtta-ttcttcagcaacatacattaagcttcatctctatataaaggaccaagatttgactaaagaaggtt 270  Q
    ||||||| ||||| |||||| ||||||  ||| ||||||||||||| ||||||||| |||| | |||||||||||||||    
T  20024372 aaagacacggttaattcttcggcaacaatcatcaagcttcatctctttataaaggaacaagctatgactaaagaaggtt 20024294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 44274698 - 44274746
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    |||||||||||||| || | |||||||||||||||||||||||| ||||    
T  44274698 ccaaacataaatcattttatcttaaactcacttttaaccaaaatcaatt 44274746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 4228603 - 4228684
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||| ||  | || ||||||||||||| |||||| |||| | ||||| ||||||| | |||||||||||    
T  4228603 gtatccaaacataaatcacttttcattcaactcacttttaatcaaaatcaattatgtaaaa-tcaattcaaccaaaatcaatt 4228684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32205981 - 32206035
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct 55  Q
    |||||||||||||||||||||||| | |||| |||||||||  ||||| ||||||    
T  32205981 gtatccaaacataaatcaattcacatcaaacccacttttaattaaaatcaattct 32206035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 38494276 - 38494325
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattc 54  Q
    ||||||||||| || ||||| || |||||||||||||||||||| |||||    
T  38494276 ccaaacataaaccacttcacattcaactcacttttaaccaaaatcaattc 38494325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 12212490 - 12212438
Alignment:
Q  33 cacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    ||||| |||||||||| ||||| || ||  |||||||||||||||||||||||    
T  12212490 cacttctaaccaaaatcaattcactcaagctcaattctatcaaaatcaattct 12212438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 6e-35; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 13739241 - 13739351
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| || | |||||    
T  13739241 gtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccatacc 13739339  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  13739340 aaacacacactt 13739351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 13744741 - 13744851
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| || | |||||    
T  13744741 gtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccatacc 13744839  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  13744840 aaacacacactt 13744851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 33899071 - 33898961
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||  | |||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||||| || || |||||||    
T  33899071 gtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgctatacc 33898972  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  33898971 aaacacacact 33898961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 17830058 - 17829957
Alignment:
Q  7 aaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacac 106  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| || |  |||||||||||||    
T  17830058 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccccacagctataccaaacac 17829959  T
Q  107 ac 108  Q
    ||    
T  17829958 ac 17829957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 6208128 - 6208018
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||| || ||||||||||||| |||||| ||||| || ||| ||||||||||||||||||||| ||||| || |||||||    
T  6208128 gtatccaaacataa-tcaattcacattcaactcacttttaatcaaaatcaattcactcaaaatcaattctatcaaaatcaattatcgccaccgctatacc 6208030  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  6208029 aaacacacactt 6208018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 10826127 - 10826235
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    |||||||||| |||||||||||  || |||||||||||||||||||| |||||||| ||| |||||| ||||||||| ||||||| ||||| | | ||||    
T  10826127 tatccaaacaaaaatcaattcaaattcaactcacttttaaccaaaatcaattctctcaaactcaattttatcaaaattaattctcaccgccgccaaacca 10826226  T
Q  102 aacacacac 110  Q
    |||||||||    
T  10826227 aacacacac 10826235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 29409317 - 29409207
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| | |||||||||||||| |||||| |||||| | ||| |||||||||| |||||||||| ||||| ||   |||||    
T  29409317 gtatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaattctttcaaactcaattctattaaaatcaattttcgccaccgtcatacc 29409218  T
Q  101 aaacacacact 111  Q
    ||| |||||||    
T  29409217 aaaaacacact 29409207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 5584113 - 5584029
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcg 87  Q
    |||||||||||||||||||| || |||||||||||||||  |||||| |||||| | ||| |||||||||||||||||||||||||    
T  5584113 tatccaaacataaatcaatt-acattaaactcacttttagtcaaaatcaattctgtcaaaatcaattctatcaaaatcaattctcg 5584029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 1312505 - 1312394
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||| ||||||||||||||| | || |||||||||||||||||||| |||| | | ||| || |||||||||||||||||| || || || ||  |||    
T  1312505 gtatccgaacataaatcaattcgcattcaactcacttttaaccaaaatcaattttatcaaactcgattctatcaaaatcaattttctccaccgctgaacc 1312406  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  1312405 aaacacacactt 1312394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 32599500 - 32599443
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||    
T  32599500 aactcacttttaatcaaaatcaattctcttaaattcaattctatcaaaatcaattctc 32599443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16548174 - 16548229
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctc 56  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  16548174 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctc 16548229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21254944 - 21254863
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||||||| || || ||||||||||||| |||| | |||||||| ||| |||||||||||||| ||||||    
T  21254944 gtatccaaacataaatcaatt-acattcaactcacttttaatcaaattcaattctctcaaactcaattctatcaaactcaatt 21254863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16442416 - 16442347
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattct 70  Q
    |||||||||||||||||||||||| || ||||||||| |||| ||||| |||||||| ||| ||||||||    
T  16442416 gtatccaaacataaatcaattcacattcaactcacttgtaactaaaatcaattctctcaaaatcaattct 16442347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 15151543 - 15151487
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    ||||||||| |||||||||| ||||| || ||| |||||||||||||||||||||||    
T  15151543 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 15151487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 699594 - 699674
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattc 84  Q
    ||||||||||||||||||||   |  |||||||||| ||| ||||| |||||| | ||| ||||||||||||||||||||||    
T  699594 atccaaacataaatcaattcttatccaactcacttt-aactaaaatcaattctttcaaactcaattctatcaaaatcaattc 699674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 7486522 - 7486561
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaa 41  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  7486522 tatccaaacataaatcattttaccttaaactcacttttaa 7486561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 16122036 - 16121985
Alignment:
Q  32 tcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||| |||||| | ||| |||||| ||||||||||||||    
T  16122036 tcacttttaaccaaaatcaattctatcaaaatcaattttatcaaaatcaatt 16121985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 31132526 - 31132580
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||| ||||| ||||||| |||| ||| ||| |||||||||||||||||||||    
T  31132526 aactcatttttagccaaaataaattatctcaaactcaattctatcaaaatcaatt 31132580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 4911032 - 4911080
Alignment:
Q  34 acttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||||||||  | || |||||||||||||||||||||    
T  4911032 acttttaaccaaaattaattctagagaa-tcaattctatcaaaatcaatt 4911080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 29399819 - 29399774
Alignment:
Q  41 accaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    |||||||| |||||| | ||| ||||||||||||||||||||||||    
T  29399819 accaaaatcaattctatcaaactcaattctatcaaaatcaattctc 29399774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 3605814 - 3605707
Alignment:
Q  4 tccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaa 103  Q
    ||||||||||||||| ||  |  | ||||||||||||| |||||| ||||||  |||| |||||| |||||||||||||| |  || ||||   ||||||    
T  3605814 tccaaacataaatcacttttcactcaactcacttttaatcaaaatcaattctacaaaa-tcaattatatcaaaatcaattttgtccaccacacaaccaaa 3605716  T
Q  104 cacacactt 112  Q
    |||||||||    
T  3605715 cacacactt 3605707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 3e-34; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 3467577 - 3467687
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    |||||||||| |||||||||||| || |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| || | ||||||    
T  3467577 tatccaaacagaaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccatacca 3467676  T
Q  102 aacacacactt 112  Q
    |||||||||||    
T  3467677 aacacacactt 3467687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 22936859 - 22936749
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| | ||||||||||||||||||||||||| || | |||||    
T  22936859 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatcaattctcgccaccgccatacc 22936760  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  22936759 aaacacacact 22936749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 26243168 - 26243274
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    ||||||||||||||||||||||  | ||||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||| | ||| ||||||||    
T  26243168 tatccaaacataaatcaattcatatcaaactcacttttaacaaaaatcaattctcttaaactcaattctatcaaaatcaattctcactgccgctatacca 26243267  T
Q  102 aacacac 108  Q
    |||||||    
T  26243268 aacacac 26243274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 28425538 - 28425428
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||   ||| ||||||||||||||||||||| ||||| ||   |||||    
T  28425538 gtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctaacaaaatcaattctatcaaaatcaattttcgccaccgtcatacc 28425439  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  28425438 aaacacacact 28425428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 3097271 - 3097162
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    ||||||||||||||||||||||  | ||||||||||||||||||||| |||||||| ||| |||||||||||||||| ||||||| || |  ||||||||    
T  3097271 tatccaaacataaatcaattcatatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaattaattctcaccactgctatacca 3097172  T
Q  102 aacacacact 111  Q
    ||||||||||    
T  3097171 aacacacact 3097162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 4941846 - 4941739
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||| |||||||| ||| |||||| ||||| |||||||||| ||| || | ||||||    
T  4941846 tatccaaacataaatcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaattatatcagaatcaattctagccaccgccatacca 4941747  T
Q  102 aacacaca 109  Q
    ||||||||    
T  4941746 aacacaca 4941739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 42143429 - 42143323
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||| |||| ||| ||| |||||| ||||| |||||||||||||| || | ||||||    
T  42143429 tatccaaacataaatcaattcacctcaaactcacttttaactaaaatcaattttctcaaactcaattatatcataatcaattctcgccaccgccatacca 42143330  T
Q  102 aacacac 108  Q
    |||||||    
T  42143329 aacacac 42143323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15206739 - 15206849
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || |||||||||||| ||||||| |||| | | ||| |||||||||||||||| ||||||| || |||||  |||    
T  15206739 gtatccaaacataaatcaattcacattcaactcacttttacccaaaatcaattttgtcaaactcaattctatcaaaattaattctctccaccactgaacc 15206838  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  15206839 aaacacacact 15206849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 36121610 - 36121502
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| || |||||| || |||||||||||||||||||| ||||| || ||| ||||||||||||||||||||||||| | || || ||||    
T  36121610 gtatccaaacataa-tctattcacattcaactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgacaccgctgtacc 36121512  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  36121511 aaacacacac 36121502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 40742361 - 40742260
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||  | ||||||||||||||| ||||| |||||| | ||| |||||||||||||||||||||||| ||| | |||||||    
T  40742361 gtatccaaacataaatcaattcagatcaaactcacttttaacgaaaatcaattcttttaaactcaattctatcaaaatcaattctcaccgtcgctatacc 40742262  T
Q  101 aa 102  Q
    ||    
T  40742261 aa 40742260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 25698024 - 25697917
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    ||||||||||||| ||||||||| |  ||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||||| || || ||||||||    
T  25698024 tatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccgctatacca 25697926  T
Q  102 aacacacac 110  Q
    | |||||||    
T  25697925 agcacacac 25697917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 41289124 - 41289016
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||||||||||||||  | |||||||||||||  ||||| |||||||| ||| |||||||| ||||||||||||||||||||| | | |||    
T  41289124 gtatccaaacataaatcaattcacaatcaactcacttttaattaaaatcaattctctcaaactcaattctgtcaaaatcaattctcgccgccgccaaacc 41289025  T
Q  101 aaacacaca 109  Q
    |||| ||||    
T  41289024 aaacccaca 41289016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 44926884 - 44926967
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||||    
T  44926884 gtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaactcaattct 44926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 30085674 - 30085596
Alignment:
Q  32 tcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacacacac 110  Q
    ||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  30085674 tcacttttaaccaaaatcaattctcttaaactcaattatatcaaaatcaattctcaccgccgctataccaaacacacac 30085596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 440255 - 440164
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgcc 92  Q
    |||||||||||||||||||||||| |  ||||||| |||||||||||| |||||||| | | ||||||||||||||||||||| || |||||    
T  440255 gtatccaaacataaatcaattcacatccaactcacatttaaccaaaatcaattctctcagactcaattctatcaaaatcaattatctccgcc 440164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 38114488 - 38114597
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||| |  |||| ||||||||||||||| |||||||| ||| |||||||||||||||| ||||||| || || | | |||    
T  38114488 gtatccaaacataa-tcaattcacatccaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaataaattctcaccaccgccaaacc 38114586  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  38114587 aaacacacact 38114597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 31246381 - 31246299
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||||||||| || |||||||||||||| ||||| ||||||   ||| |||||||| ||||||||||||    
T  31246381 gtatccaaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaatt 31246299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 36114080 - 36113999
Alignment:
Q  28 aaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacacaca 109  Q
    ||||| |||||||| |||||| |||||||| ||| |||||||||||||||||||||||| |||||   ||||||||||||||    
T  36114080 aaacttacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccgccgtcataccaaacacaca 36113999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 38152237 - 38152137
Alignment:
Q  4 tccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaa 103  Q
    |||||||||||||||||| || | ||||||||||| ||| ||||| |||| ||| ||| | |||||||||||||||||||||| ||||||| | ||||||    
T  38152237 tccaaacataaatcaatttacatcaaactcacttt-aactaaaatcaattttctcaaacttaattctatcaaaatcaattctcaccgccaccaaaccaaa 38152139  T
Q  104 ca 105  Q
    ||    
T  38152138 ca 38152137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40742167 - 40742236
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattct 70  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||| |||||||| ||| ||||||||    
T  40742167 gtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattct 40742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 25497735 - 25497818
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    |||||||||||||| ||||||||| |  |||||||||||||||||||| |||||||  ||| |||||| ||||||||||||||||    
T  25497735 gtatccaaacataa-tcaattcacatccaactcacttttaaccaaaatcaattctcctaaactcaattttatcaaaatcaattct 25497818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 30759363 - 30759287
Alignment:
Q  9 acataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    |||||||||||||||| |  |||||||||||||||||||| |||||||| ||| |||||| ||| ||||||||||||    
T  30759363 acataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattatattaaaatcaattct 30759287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 6399174 - 6399063
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||| |||||||||||||||||| | ||||||||||||||||| ||| |||||| | ||| ||||||||| || ||||||||  | | ||| | | |||    
T  6399174 gtatcgaaacataaatcaattcacatcaaactcacttttaaccataatcaattctatcaaactcaattctaccagaatcaattaactctgccgccaaacc 6399075  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  6399074 aaacacacactt 6399063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 24897626 - 24897547
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacacac 108  Q
    |||||||||||||||||||| |||||||  ||| |||||| ||||||||||||||||  ||||| | |||||||||||||    
T  24897626 aactcacttttaaccaaaatcaattctcataaactcaattttatcaaaatcaattcttaccgccgccataccaaacacac 24897547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 42149049 - 42149100
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  42149049 tatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaatt 42149100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 30081715 - 30081635
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||| |||| ||  ||| |||||| ||||||||||||||    
T  30081715 tatccaaacataaatcaattcactttaa-ctcacttttaactaaaatcaattttcacaaaatcaattttatcaaaatcaatt 30081635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 29023308 - 29023376
Alignment:
Q  43 caaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacacacact 111  Q
    |||||| |||||||| ||| ||||||||||||||||||||| ||||| |||| ||||| ||||||||||    
T  29023308 caaaatcaattctctcaaactcaattctatcaaaatcaattttcgccaccaccataccgaacacacact 29023376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43550934 - 43550986
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| ||||    
T  43550934 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 43550986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 8125014 - 8125124
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||| | |||||||||| |||||||||| |||||||| ||| || |||| | ||||||||||| ||    |  |||||||    
T  8125014 gtatccaaacataa-tcaattcacatcaaactcacttctaaccaaaatcaattctctcaaactcgattcaaccaaaatcaattatcaggactgctatacc 8125112  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  8125113 aaacacacactt 8125124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 27649819 - 27649874
Alignment:
Q  32 tcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcg 87  Q
    ||||||||||||||||| |||||| | ||| |||||||||||||||||||||||||    
T  27649819 tcacttttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattctcg 27649874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 36779435 - 36779519
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcg 87  Q
    ||||||||||||||| | || || || ||||||||||||| |||||| ||||||  |||| |||||| ||||||||||||||||||    
T  36779435 tatccaaacataaattactttacattcaactcacttttaatcaaaatcaattctacaaaa-tcaattatatcaaaatcaattctcg 36779519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 3465478 - 3465422
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    ||||||||| |||||||||| ||||| || ||| |||||||||||||||||||||||    
T  3465478 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 3465422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 33627100 - 33627017
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattc 84  Q
    ||||||||||||||||||||||   |  |||||| ||||||  ||||| |||||| | ||| ||||||||||||||||||||||    
T  33627100 gtatccaaacataaatcaattcttatccaactcagttttaaataaaatcaattctttcaaactcaattctatcaaaatcaattc 33627017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 35615752 - 35615837
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    ||||| |||||||||||||||| | || ||||||||| |  ||||||| |||  | | ||| ||||||||||||||||||||||||    
T  35615752 gtatctaaacataaatcaattcccattcaactcacttctttccaaaatcaatcttgtcaaactcaattctatcaaaatcaattctc 35615837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 39219765 - 39219818
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct 55  Q
    ||||||||||||||||| ||||  ||||||||||||||||| ||||| ||||||    
T  39219765 tatccaaacataaatcacttcatattaaactcacttttaacgaaaatcaattct 39219818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1373082 - 1373134
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    |||||||||||||||||| |||| ||| |||||||||||| ||||||| ||||    
T  1373082 gtatccaaacataaatcacttcaacttcaactcacttttatccaaaatcaatt 1373134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19649229 - 19649281
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    |||||||||||||||||| || || || |||||||||||||||||||| ||||    
T  19649229 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaatt 19649281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 20190186 - 20190234
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    |||||||||||||| || | |||||||||||||||||||||||| ||||    
T  20190186 ccaaacataaatcattttatcttaaactcacttttaaccaaaatcaatt 20190234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 22552804 - 22552724
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||||  || | |||||||||||| ||||||| |||||  | ||| |||||| | ||||||||||||    
T  22552804 atccaaacataaatcaattttccatcaactcacttttatccaaaatcaattcaattaaaatcaattatgtcaaaatcaatt 22552724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 26125842 - 26125910
Alignment:
Q  43 caaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacacacact 111  Q
    |||||| |||||||| ||| |||||||||||||||| ||||||| || || || ||||||| |||||||    
T  26125842 caaaatcaattctcttaaactcaattctatcaaaattaattctcaccaccgctgtaccaaagacacact 26125910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 8702473 - 8702392
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||||||| | ||| || ||| ||||||| ||||| |||| |   ||| |||||||||||||||||||||    
T  8702473 gtatccaaacataaatcaatt-atcttcaaatcatttttaactaaaatcaattttgctaaagtcaattctatcaaaatcaatt 8702392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 10552969 - 10552923
Alignment:
Q  7 aaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    ||||||||||||||| || || |||||||||||||||||||| ||||    
T  10552969 aaacataaatcaatttacattcaactcacttttaaccaaaatcaatt 10552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26490976 - 26491030
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct 55  Q
    ||||||||||| ||||||||| ||  | |||||||||||||||||||| ||||||    
T  26490976 gtatccaaacacaaatcaatttacactcaactcacttttaaccaaaatcaattct 26491030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29970845 - 29970926
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||| || |   | |||||||||||||| ||||| |||| |  ||| ||||||||||||||||||||||    
T  29970845 gtatccaaacataaatcactttaaactcaactcacttttaactaaaatcaattatacaaa-ttcaattctatcaaaatcaatt 29970926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33588763 - 33588817
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct 55  Q
    |||||||||||||||| | || || |||||||||||||||| |||||| ||||||    
T  33588763 gtatccaaacataaataattttacattaaactcacttttaatcaaaatcaattct 33588817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 38335855 - 38335810
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaa 46  Q
    |||||| |||| ||||||||||||||| ||||||||||||| ||||    
T  38335855 gtatccgaacacaaatcaattcaccttcaactcacttttaatcaaa 38335810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 45147273 - 45147221
Alignment:
Q  59 aaattcaattctatcaaaatcaattctcgccgccactataccaaacacacact 111  Q
    |||||| ||||||||||||||||||||| ||||| |   ||||||||||||||    
T  45147273 aaattcgattctatcaaaatcaattctcaccgccgccgaaccaaacacacact 45147221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26651914 - 26651805
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||| |||||||| ||| | |||||||||||||||||||||||||||| | |||||    
T  26651914 gtatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatcaattctcgccgccgccatacc 26651815  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  26651814 aaacacacac 26651805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 43781584 - 43781477
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| || | |||||    
T  43781584 gtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgccatacc 43781486  T
Q  101 aaacacaca 109  Q
    |||||||||    
T  43781485 aaacacaca 43781477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 19592297 - 19592186
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| || || | ||| |    
T  19592297 gtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctaaaactcaattctatcaaaatcaattctccccaccgccatatc 19592198  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  19592197 aaacacacactt 19592186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 46830135 - 46830024
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||| ||||| || ||| ||||||||||||||||||||||||||| || | |||||    
T  46830135 gtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattctcgccaccgccatacc 46830036  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  46830035 aaacacacactt 46830024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 16566325 - 16566435
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| | ||  | |||||    
T  16566325 gtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctccctgctgccatacc 16566424  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  16566425 aaacacacact 16566435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 51922960 - 51923070
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||  || |||||||||||||||||||| |||||||| ||| ||||||||| ||||||||||||||| |||| | |||||    
T  51922960 gtatccaaacataaatcaattcagattcaactcacttttaaccaaaatcaattctctcaaactcaattctaacaaaatcaattctcgtcgccgccatacc 51923059  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  51923060 aaacacacact 51923070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 29149373 - 29149263
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || ||||||||||| | |||||| |||||||| ||| |||||||||||||||||||||||| || || |||||||    
T  29149373 gtatccaaacataaatcaattcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattctccccaccgctatacc 29149274  T
Q  101 aaacacacact 111  Q
    ||| |||||||    
T  29149273 aaatacacact 29149263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 48550239 - 48550348
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaa 102  Q
    ||||||||||||||||||| || |  ||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||||| || | |||||||    
T  48550239 atccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattctcgccaccgccataccaa 48550338  T
Q  103 acacacactt 112  Q
    ||||||||||    
T  48550339 acacacactt 48550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 39636805 - 39636913
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| |  ||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||||| ||   |||||    
T  39636805 gtatccaaacataaatcaattcacatccaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccaccgtcatacc 39636904  T
Q  101 aaacacaca 109  Q
    |||||||||    
T  39636905 aaacacaca 39636913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 30842152 - 30842258
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||| | || | |||||    
T  30842152 gtatccaaacataa-tcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcgtcaccgccatacc 30842250  T
Q  101 aaacacac 108  Q
    ||||||||    
T  30842251 aaacacac 30842258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 32238124 - 32238014
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||||  |||||||| || |||||||||||||||||||| ||||| || ||| ||||||||||||||||||||| ||||| || |||||||    
T  32238124 gtatccaaacataac-caattcacattcaactcacttttaaccaaaatcaattcactcaaactcaattctatcaaaatcaattatcgccaccgctatacc 32238026  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  32238025 aaacacacactt 32238014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 55638821 - 55638718
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||| ||||||||||||||| || || |||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||| | |||    
T  55638821 gtatctaaacataaatcaatttacatttaactcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaattctcgccgccaccaaacc 55638722  T
Q  101 aaac 104  Q
    ||||    
T  55638721 aaac 55638718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 28987039 - 28987148
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| || || || | |||||    
T  28987039 gtattcaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattttcaccaccgccatacc 28987137  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  28987138 aaacacacact 28987148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 39187754 - 39187864
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| || || | ||||||||||||||| |||||||| ||| |||||||||||||||||||||||| || || | | |||    
T  39187754 gtatccaaacataaatcaattcacattcaaattacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccaccgccaaacc 39187853  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  39187854 aaacacacact 39187864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 43772189 - 43772079
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||||||| |||||| |  |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| ||| | |||| | |||    
T  43772189 gtatccaaacataaatcgattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattatcgtcaccaccaaacc 43772090  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  43772089 aaacacacact 43772079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 48407763 - 48407678
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcg 87  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||    
T  48407763 gtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctcg 48407678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 54150546 - 54150656
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||| |||||||||||| |  ||||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||| ||| || | |||||    
T  54150546 gtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattcttgccaccgccatacc 54150645  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  54150646 aaacacacact 54150656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 14072523 - 14072631
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| |||||| ||||| ||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||||| || || | |||||    
T  14072523 gtatccaaacataa-tcaatttaccttcaactcacttttaaacaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgccatacc 14072621  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  14072622 aaacacacac 14072631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 33574203 - 33574288
Alignment:
Q  6 caaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgc 91  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||    
T  33574203 caaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaaataattctcgccgc 33574288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 14564212 - 14564102
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||  |  ||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||||| ||||| |   |||    
T  14564212 gtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccgccgcccaacc 14564113  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  14564112 aaacacacact 14564102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6138686 - 6138577
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||| |||| | | ||| |||||||||||||||||||||||| || || | | |||    
T  6138686 gtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattatttcaaactcaattctatcaaaatcaattctccccaccgccaaacc 6138587  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  6138586 aaacacacac 6138577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 13167545 - 13167656
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||| |||||||| ||| |||||| |||||||||||||| |  |  || | |||||    
T  13167545 gtatccaaatataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaatttttcctaccgccatacc 13167644  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  13167645 aaacacacactt 13167656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 42944963 - 42944880
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    |||| |||||||||||||||||| || |||||||||||||||||||| |||||||| ||| |||||||||||||||| ||||||    
T  42944963 tatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaataaattct 42944880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 49519750 - 49519863
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgcca---ctat 97  Q
    |||||||||||||||| ||||||| |  |||||||||||||||||||| |||||||| ||| ||||||||||||||| |||||||| || |||   | ||    
T  49519750 gtatccaaacataaataaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaaccaattctcaccaccaccgccat 49519849  T
Q  98 accaaacacacact 111  Q
    ||||||||||||||    
T  49519850 accaaacacacact 49519863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 6505221 - 6505331
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||| |||||||||||||||||| | ||||||| ||||||||||||| |||||||| ||| |||||||||||||| |||||| ||| |||| | |  ||    
T  6505221 gtatctaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaattctatcaaagtcaattatcgacgccgccaatcc 6505320  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  6505321 aaacacacact 6505331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 9893731 - 9893837
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||| |||||||||  |  ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||| || || | |||||    
T  9893731 gtatccaaacatatatcaattcatatctaactcacttttgacaaaaatcaattctctcaaattcaattctatcaaaatcaattctcaccaccgccatacc 9893830  T
Q  101 aaacaca 107  Q
    |||||||    
T  9893831 aaacaca 9893837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 25312735 - 25312821
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcg 87  Q
    ||||||||||| |||||||||||| |  ||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||||||    
T  25312735 gtatccaaacaaaaatcaattcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcg 25312821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 54153065 - 54153175
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||| ||||||||| ||||||||| || |||||||||||||||||||| ||||| || ||| |||||| ||| |||||||||| ||||| || |||||||    
T  54153065 gtattcaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattcactcaaactcaattatattaaaatcaattatcgccaccgctatacc 54153163  T
Q  101 aaacacacactt 112  Q
    ||||||| ||||    
T  54153164 aaacacatactt 54153175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 13183116 - 13183034
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||| |||| ||| | | |||||| ||||||||||||||    
T  13183116 gtatccaaacataaatcaattcaccttaaacttgcttttaaccaaaatcaattatctcagactcaattttatcaaaatcaatt 13183034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 46926068 - 46926150
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||  |||| ||| ||| |||||||||||||||||||||    
T  46926068 gtatccaaacataaatcaattcacatctaactcacttttaaccaaaaacaattttctcaaactcaattctatcaaaatcaatt 46926150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 4 - 92
Target Start/End: Original strand, 14076038 - 14076125
Alignment:
Q  4 tccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgcc 92  Q
    |||||||||||||||||| || | ||||||||||| ||||||||| |||| ||| ||| |||||||||||||||||||||||| |||||    
T  14076038 tccaaacataaatcaatttacatcaaactcacttt-aaccaaaatcaattttctcaaactcaattctatcaaaatcaattctcaccgcc 14076125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 31520436 - 31520328
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    |||| ||||||||||| ||||||    ||||||||||||||||||||||||||| | ||| |  |||||| |||||||||||||||||  | ||||||||    
T  31520436 tatctaaacataaatccattcacacccaactcacttttaaccaaaattaattctttcaaacttcattctaccaaaatcaattctcgccatcgctatacca 31520337  T
Q  102 aacacacac 110  Q
    |||||||||    
T  31520336 aacacacac 31520328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 41866176 - 41866284
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaa 102  Q
    |||||||||||||||||||||| |  |||||||||||||| ||| | ||||| || ||| |||||| |||||||||||||| ||||| || | | |||||    
T  41866176 atccaaacataaatcaattcacatccaactcacttttaactaaactcaattccctcaaactcaattttatcaaaatcaattatcgccaccgccaaaccaa 41866275  T
Q  103 acacacact 111  Q
    |||||||||    
T  41866276 acacacact 41866284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 9889373 - 9889295
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacaca 107  Q
    ||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||||| || || | ||||||||||||    
T  9889373 aactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgccataccaaacaca 9889295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 15603381 - 15603491
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacca 101  Q
    |||| ||||| |||||||||||| | |||||||||||| |||| ||| |||| ||| ||| |||||||||||||||||||||||| || ||   | ||||    
T  15603381 tatctaaacacaaatcaattcacatcaaactcactttttaccataatcaattatctcaaactcaattctatcaaaatcaattctccccaccgtcaaacca 15603480  T
Q  102 aacacacactt 112  Q
    |||||||||||    
T  15603481 aacacacactt 15603491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 49136542 - 49136624
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||||||||| | ||||||||||||||||| ||| |||||||| ||| |||||| || || ||||||||    
T  49136542 gtatccaaacataaatcaattcacatcaaactcacttttaaccataatcaattctctcaaactcaattataccagaatcaatt 49136624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 26426153 - 26426072
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacacacac 110  Q
    |||||||||||||||||||| |||| ||| ||| |||||||||||||||||||||||| || ||   |||||||||||||||    
T  26426153 aactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattctccccaccgtcataccaaacacacac 26426072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 48908294 - 48908402
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    ||||||||||||||  |||||||| | ||||||||||||||||||||| |||||||| ||| |||||  ||| |||||||||| || ||||| | | |||    
T  48908294 gtatccaaacataac-caattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaataatattaaaatcaattttcaccgccgccaaacc 48908392  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  48908393 aaacacacac 48908402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 4954113 - 4954050
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaatt 68  Q
    |||||||||||||||||||| | ||||||||||||||||||||| |||||||| ||| ||||||    
T  4954113 ccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaaatcaatt 4954050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 54488625 - 54488736
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||| ||||||||||||||||||| || |||||||||||||| ||||| ||||||   ||| |||||||| |||||||||||| || || || |   |||    
T  54488625 gtattcaaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaattatctccaccgcagaacc 54488724  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  54488725 aaacacacactt 54488736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 38306031 - 38306113
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||||||| | || |||||||||||||| ||||| ||||||   ||| |||||||| ||||||||||||    
T  38306031 gtatccaaacataaatcaattcgcattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaatt 38306113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 38263924 - 38264001
Alignment:
Q  6 caaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||| ||||||| | ||||||| |||||| ||||||||||| ||| ||| |||||| ||||||||||||||    
T  38263924 caaacataaattaattcacatcaaactcaattttaagcaaaattaattttctcaaactcaattatatcaaaatcaatt 38264001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 48550492 - 48550424
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattct 70  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||| |||||| | ||| ||||||||    
T  48550492 tatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctatcaaaatcaattct 48550424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 54735713 - 54735626
Alignment:
Q  4 tccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgcc 92  Q
    |||||||||||| ||||| || | ||||||| ||| ||||||||| |||| ||| ||| |||||||||||||||||||||||| |||||    
T  54735713 tccaaacataaaccaatttacatcaaactcaattt-aaccaaaatcaattttctcaaactcaattctatcaaaatcaattctcaccgcc 54735626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 14054872 - 14054954
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattc 84  Q
    ||||||||||||||||||||||| | |||||||||||| || ||| | |||||| | ||| |||||| | |||||||||||||    
T  14054872 tatccaaacataaatcaattcacatcaaactcacttttgactaaactcaattctttcaaactcaattatgtcaaaatcaattc 14054954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15619634 - 15619703
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattct 70  Q
    ||||||||||||| |||||||||| |  ||||||||||| |||||||| |||||||| ||| ||||||||    
T  15619634 gtatccaaacatacatcaattcacatccaactcactttttaccaaaatcaattctctcaaactcaattct 15619703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 19599559 - 19599487
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaa 76  Q
    ||||||||||||||||||| || || ||||||||||||  |||||| |||||||| ||| ||||||||||||||    
T  19599559 atccaaacataaatcaatt-acattcaactcacttttattcaaaatcaattctctcaaactcaattctatcaaa 19599487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 56241901 - 56241845
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctct 57  Q
    |||||||||||||||||||||||  | |||||||||||||| |||||| ||||||||    
T  56241901 gtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattctct 56241845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 38740368 - 38740286
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattc 84  Q
    |||||||||||||||||| |||| ||| |||||||||||| ||||||| |||| |  |||| |||||||  |||||||||||||    
T  38740368 gtatccaaacataaatcacttcaacttcaactcacttttatccaaaatcaattttacaaaa-tcaattcattcaaaatcaattc 38740286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 2175211 - 2175161
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    |||||||||||||||||||||| | |||||||||||||| |||||| ||||    
T  2175211 atccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaatt 2175161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 15619681 - 15619729
Alignment:
Q  63 tcaattctatcaaaatcaattctcgccgccactataccaaacacacact 111  Q
    |||||||| ||||| ||||||||| ||||| ||||||||||||||||||    
T  15619681 tcaattctctcaaactcaattctccccgccgctataccaaacacacact 15619729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 39993574 - 39993642
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattct 70  Q
    |||| |||||||||||||||||| || |||||| |||||| |||||| |||||| | ||| ||||||||    
T  39993574 tatctaaacataaatcaattcacatttaactcatttttaatcaaaatcaattctatgaaaatcaattct 39993642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 45780048 - 45779970
Alignment:
Q  28 aaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacaca 107  Q
    |||||||||||| |||||||| |||| ||| ||| ||||||||||| ||||||||||||  |||| | | ||||||||||    
T  45780048 aaactcactttttaccaaaatcaatt-tctcaaactcaattctatcgaaatcaattctcatcgccgccaaaccaaacaca 45779970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 22694656 - 22694579
Alignment:
Q  8 aacataaatcaattcaccttaaactcacttttaaccaaaattaattct-ctaaaattcaattctatcaaaatcaattct 85  Q
    ||||||||||| || |  || |||||||||||||||||||| |||||| || ||| ||||||||| |||||||||||||    
T  22694656 aacataaatcactttatgttcaactcacttttaaccaaaatcaattctacttaaa-tcaattctaccaaaatcaattct 22694579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22699762 - 22699816
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct 55  Q
    |||||||||||||||||| || || || |||| ||||||||||||||| ||||||    
T  22699762 gtatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattct 22699816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22980768 - 22980714
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct 55  Q
    |||||||||||||||||| || || || |||| ||||||||||||||| ||||||    
T  22980768 gtatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattct 22980714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22994355 - 22994301
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct 55  Q
    |||||||||||||||||| || || || |||| ||||||||||||||| ||||||    
T  22994355 gtatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattct 22994301  T

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Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 26459897 - 26459851
Alignment:
Q  66 attctatcaaaatcaattctcgccgccactataccaaacacacactt 112  Q
    ||||||||||||| |||||||||| || | |||||||||||||||||    
T  26459897 attctatcaaaattaattctcgccaccgccataccaaacacacactt 26459851  T

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Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 52063041 - 52062991
Alignment:
Q  4 tccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattc 54  Q
    |||||||| |||||| || |||||||||||||||||||| ||||| |||||    
T  52063041 tccaaacagaaatcattttaccttaaactcacttttaactaaaatcaattc 52062991  T

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Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 1616515 - 1616563
Alignment:
Q  36 ttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    ||||||||||||| ||||||  ||||| ||||||||||||||||||||||    
T  1616515 ttttaaccaaaatcaattctacaaaat-caattctatcaaaatcaattct 1616563  T

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Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 14597689 - 14597609
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||| ||  | || ||||||||||||| |||||||| || | ||||| ||||||| | |||||||||||    
T  14597689 tatccaaacataaatcacttttcattcaactcacttttaatcaaaattagttatgtaaaa-tcaattcaaccaaaatcaatt 14597609  T

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Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16492947 - 16492992
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaa 46  Q
    |||||||||||||||| ||||||| || ||||||||||||| ||||    
T  16492947 gtatccaaacataaataaattcacattcaactcacttttaatcaaa 16492992  T

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Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 505
Target Start/End: Original strand, 24717275 - 24717336
Alignment:
Q  444 ttgtcgtaaataactggattgagatgaggaagccctccaggttaaggcaaggaaatctagga 505  Q
    |||| ||||||  |||||||||||| ||||||||||| ||||| | | ||||||||||||||    
T  24717275 ttgttgtaaatttctggattgagattaggaagccctctaggttgaagtaaggaaatctagga 24717336  T

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Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 28947811 - 28947762
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattc 54  Q
    |||||||||||||| || || || |||||||||||||||||||| |||||    
T  28947811 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattc 28947762  T

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Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 53532025 - 53532082
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctc 86  Q
    |||||||||||||| ||||| |||| | | ||| |||||| |||||||||||||||||    
T  53532025 aactcacttttaactaaaatcaattatgtcaaactcaattttatcaaaatcaattctc 53532082  T

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Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 53914919 - 53914987
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattct 70  Q
    ||||||||||||||||||||| || || ||||||||||||  ||||||  ||||||| ||| ||||||||    
T  53914919 gtatccaaacataaatcaatt-acattcaactcacttttagtcaaaatcgattctctgaaactcaattct 53914987  T

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Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 523172 - 523252
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||||||  || |||||||||||  ||||||| |||| | | ||  ||||||  |||||||||||||    
T  523172 atccaaacataaatcaattcatattgaactcactttttcccaaaatcaattttgtcaagctcaattaaatcaaaatcaatt 523252  T

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Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 4649967 - 4649911
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattct 85  Q
    ||||| ||| |||||||||| ||||| || ||| |||||| ||||||||||||||||    
T  4649967 aactcgcttctaaccaaaatcaattcactcaaactcaattttatcaaaatcaattct 4649911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 36150625 - 36150693
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattct 70  Q
    ||||||||||||||||| || || || ||||||||||||| |||||| |||| | | ||| ||||||||    
T  36150625 tatccaaacataaatcactttacattcaactcacttttaatcaaaatcaattatatcaaaatcaattct 36150693  T

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Target: scaffold0369 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 8484 - 8595
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||| | | ||| ||||||||||||||||||||| |  || || | |||||    
T  8484 gtatccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaattattcccaccgccatacc 8583  T
Q  101 aaacacacactt 112  Q
    ||||||||||||    
T  8584 aaacacacactt 8595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 2331 - 2225
Alignment:
Q  4 tccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaa 103  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||| | | ||| |||||||| |||||||||||| ||||| || | ||||||||    
T  2331 tccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattatgtcaaactcaattctgtcaaaatcaattttcgccaccgccataccaaa 2232  T
Q  104 cacacac 110  Q
    || ||||    
T  2231 cagacac 2225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 59; Significance: 9e-25; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 253163 - 253273
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||||||||||||  |  ||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||||| ||||| |   |||    
T  253163 gtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattctctccgccgcccaacc 253262  T
Q  101 aaacacacact 111  Q
    |||||||||||    
T  253263 aaacacacact 253273  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 219689 - 219769
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    ||||||||||||||||| ||  | || ||||||||||||| |||||||| || | ||||| ||||||| | |||||||||||    
T  219689 tatccaaacataaatcacttttcattcaactcacttttaatcaaaattagttatgtaaaa-tcaattcaaccaaaatcaatt 219769  T

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Target: scaffold0394 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 5882 - 5786
Alignment:
Q  15 atcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacacacact 111  Q
    |||||||||| || |||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||| |  |||| ||||||||||||||||    
T  5882 atcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattctccctaccaccataccaaacacacact 5786  T

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Target: scaffold0007 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29188 - 29080
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactatacc 100  Q
    |||||||||||||| ||||||||| || |||||||||||||||||||| |||||| | ||| | ||||||||||||||||||| |  || |||| | |||    
T  29188 gtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctttcaaacttaattctatcaaaatcaattattaccaccaccaaacc 29090  T
Q  101 aaacacacac 110  Q
    ||||||||||    
T  29089 aaacacacac 29080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 9173 - 9251
Alignment:
Q  29 aactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattctcgccgccactataccaaacaca 107  Q
    ||||||||||||| |||||| |||||||| ||| |||||||||||||||||||||||| || || | ||||||||||||    
T  9173 aactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattctcaccaccgccataccaaacaca 9251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 2091 - 2011
Alignment:
Q  3 atccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||||||  | ||||||| ||| ||||||||| |||||| | ||| |||||||||||||||||||||    
T  2091 atccaaacataaatcaattcatatcaaactcattttgaaccaaaatcaattctttcaaactcaattctatcaaaatcaatt 2011  T

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Target: scaffold0014 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 118476 - 118393
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattc 84  Q
    ||||||||||||||||||||| || | ||||||||||||||| |||||  ||||| | ||| ||||||| ||||||||||||||    
T  118476 gtatccaaacataaatcaatttacatcaaactcacttttaacaaaaatctattctatcaaactcaattcgatcaaaatcaattc 118393  T

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Target: scaffold0172 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15323 - 15242
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaatt 83  Q
    |||||||||||||||||| || |  || |||||||||||||||||||| |||| |   ||| |||||||||||||||||||||    
T  15323 gtatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt-tgacaaaatcaattctatcaaaatcaatt 15242  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 65536 - 65617
Alignment:
Q  2 tatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattctctaaaattcaattctatcaaaatcaattc 84  Q
    ||||||||||||||||| || || ||||||||| ||||||||||||| |||| ||  | | |||||||||||||||| |||||    
T  65536 tatccaaacataaatcactttacattaaactcatttttaaccaaaatcaatt-tcacagaatcaattctatcaaaattaattc 65617  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 199431 - 199381
Alignment:
Q  5 ccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattct 55  Q
    |||||||||||||| || || || |||||||||||||||||||| ||||||    
T  199431 ccaaacataaatcactttacgttcaactcacttttaaccaaaatcaattct 199381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 138574 - 138521
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaattc 54  Q
    ||||||||||||||||||||| |  || | |||||||||||| |||||||||||    
T  138574 gtatccaaacataaatcaatttatgttcagctcacttttaactaaaattaattc 138521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38421 - 38369
Alignment:
Q  1 gtatccaaacataaatcaattcaccttaaactcacttttaaccaaaattaatt 53  Q
    |||||||| |||||||||||| || || |||| | ||||||||||||||||||    
T  38421 gtatccaatcataaatcaatttacatttaacttaattttaaccaaaattaatt 38369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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