View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3836_low_8 (Length: 245)

Name: NF3836_low_8
Description: NF3836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3836_low_8
NF3836_low_8
[»] chr7 (23 HSPs)
chr7 (27-215)||(30089690-30089878)
chr7 (27-193)||(26608496-26608662)
chr7 (27-193)||(26619061-26619225)
chr7 (27-193)||(26621048-26621214)
chr7 (27-177)||(9242441-9242591)
chr7 (27-170)||(4685360-4685503)
chr7 (27-177)||(26224935-26225085)
chr7 (27-177)||(26205372-26205522)
chr7 (46-171)||(20277336-20277461)
chr7 (27-177)||(10022117-10022267)
chr7 (46-153)||(16086504-16086611)
chr7 (67-191)||(29932346-29932469)
chr7 (62-177)||(16170264-16170379)
chr7 (68-141)||(27135958-27136031)
chr7 (30-191)||(3234306-3234467)
chr7 (46-170)||(8241598-8241721)
chr7 (97-158)||(3374313-3374374)
chr7 (130-191)||(14803120-14803181)
chr7 (130-191)||(15250114-15250175)
chr7 (57-170)||(3364982-3365096)
chr7 (74-191)||(24731759-24731876)
chr7 (74-186)||(7711361-7711473)
chr7 (74-118)||(26701083-26701127)
[»] chr2 (15 HSPs)
chr2 (27-197)||(24479125-24479295)
chr2 (30-190)||(7702409-7702569)
chr2 (27-170)||(31342673-31342816)
chr2 (27-177)||(30266996-30267146)
chr2 (46-186)||(11017441-11017581)
chr2 (28-170)||(40016591-40016734)
chr2 (50-177)||(44920951-44921077)
chr2 (30-192)||(22966501-22966665)
chr2 (50-175)||(7718180-7718305)
chr2 (27-175)||(15513662-15513810)
chr2 (36-191)||(41573372-41573527)
chr2 (88-191)||(15540317-15540420)
chr2 (31-189)||(26734732-26734887)
chr2 (48-182)||(27151215-27151343)
chr2 (74-170)||(45404711-45404807)
[»] chr3 (22 HSPs)
chr3 (30-191)||(9633402-9633563)
chr3 (27-177)||(13845985-13846135)
chr3 (27-168)||(2550168-2550309)
chr3 (27-177)||(1627904-1628054)
chr3 (27-170)||(7407711-7407854)
chr3 (28-191)||(5498457-5498619)
chr3 (27-165)||(2943171-2943309)
chr3 (27-170)||(1654576-1654719)
chr3 (48-190)||(26707839-26707981)
chr3 (27-192)||(27259411-27259567)
chr3 (36-165)||(36035294-36035423)
chr3 (30-191)||(36035451-36035604)
chr3 (27-102)||(28745043-28745118)
chr3 (53-191)||(16457314-16457452)
chr3 (31-169)||(2179926-2180066)
chr3 (74-170)||(1613217-1613313)
chr3 (30-120)||(26735684-26735774)
chr3 (36-188)||(27713405-27713554)
chr3 (27-153)||(35082993-35083119)
chr3 (99-191)||(36034998-36035090)
chr3 (74-170)||(23358460-23358556)
chr3 (74-170)||(23363281-23363377)
[»] chr8 (23 HSPs)
chr8 (27-191)||(6801787-6801951)
chr8 (30-191)||(14997600-14997761)
chr8 (27-168)||(45356069-45356210)
chr8 (45-194)||(25637620-25637769)
chr8 (50-170)||(25638807-25638927)
chr8 (50-170)||(28249055-28249175)
chr8 (27-177)||(17634428-17634578)
chr8 (27-191)||(5650902-5651066)
chr8 (27-177)||(19369867-19370017)
chr8 (27-177)||(5528736-5528886)
chr8 (27-177)||(19448441-19448591)
chr8 (27-177)||(19532485-19532635)
chr8 (38-169)||(29345432-29345564)
chr8 (30-132)||(6223439-6223541)
chr8 (46-177)||(18766910-18767041)
chr8 (53-191)||(6403572-6403710)
chr8 (74-192)||(29553607-29553725)
chr8 (71-188)||(5000661-5000778)
chr8 (46-189)||(31369082-31369225)
chr8 (38-191)||(31347328-31347481)
chr8 (74-194)||(26173778-26173896)
chr8 (134-191)||(7292813-7292870)
chr8 (127-191)||(29118587-29118650)
[»] chr1 (15 HSPs)
chr1 (27-192)||(18308126-18308291)
chr1 (45-191)||(12189931-12190077)
chr1 (50-192)||(28636881-28637023)
chr1 (27-191)||(39368596-39368761)
chr1 (27-177)||(51758746-51758896)
chr1 (30-191)||(897434-897594)
chr1 (67-177)||(16222771-16222881)
chr1 (85-191)||(5911679-5911785)
chr1 (33-141)||(1843981-1844089)
chr1 (76-192)||(17112903-17113019)
chr1 (101-177)||(37097371-37097447)
chr1 (74-149)||(3399643-3399718)
chr1 (88-170)||(15214327-15214409)
chr1 (66-161)||(13208621-13208716)
chr1 (72-149)||(15204615-15204692)
[»] chr6 (29 HSPs)
chr6 (28-170)||(16734805-16734947)
chr6 (27-177)||(12591826-12591976)
chr6 (27-201)||(14669303-14669477)
chr6 (27-187)||(23904309-23904469)
chr6 (56-188)||(9631141-9631273)
chr6 (50-170)||(11936747-11936867)
chr6 (27-170)||(15361715-15361858)
chr6 (46-170)||(6684094-6684217)
chr6 (46-192)||(23264472-23264620)
chr6 (27-177)||(17719680-17719830)
chr6 (54-192)||(29667899-29668039)
chr6 (50-158)||(11948727-11948835)
chr6 (30-191)||(4485525-4485686)
chr6 (46-191)||(1942548-1942693)
chr6 (38-149)||(10070676-10070786)
chr6 (27-169)||(34374826-34374970)
chr6 (64-189)||(10935776-10935901)
chr6 (79-176)||(15690432-15690529)
chr6 (91-182)||(4591138-4591229)
chr6 (71-153)||(30481229-30481311)
chr6 (127-189)||(6673675-6673737)
chr6 (72-191)||(28736608-28736729)
chr6 (74-170)||(2668457-2668553)
chr6 (45-125)||(8496625-8496706)
chr6 (74-170)||(14003873-14003969)
chr6 (74-170)||(27969921-27970017)
chr6 (74-192)||(6346862-6346980)
chr6 (88-133)||(2941043-2941088)
chr6 (68-133)||(11655033-11655098)
[»] chr5 (27 HSPs)
chr5 (27-177)||(17037536-17037686)
chr5 (27-170)||(5079021-5079164)
chr5 (27-191)||(19984974-19985138)
chr5 (27-192)||(30786245-30786410)
chr5 (30-191)||(31571008-31571173)
chr5 (27-192)||(12042133-12042299)
chr5 (27-170)||(7410824-7410967)
chr5 (27-177)||(23679434-23679584)
chr5 (27-177)||(23855227-23855377)
chr5 (74-191)||(9354393-9354510)
chr5 (74-191)||(9333565-9333682)
chr5 (78-177)||(31068971-31069069)
chr5 (31-193)||(38449930-38450089)
chr5 (69-191)||(10869417-10869537)
chr5 (46-139)||(42076078-42076171)
chr5 (46-141)||(37233061-37233156)
chr5 (107-191)||(18191886-18191970)
chr5 (48-149)||(40401987-40402088)
chr5 (74-170)||(19615036-19615132)
chr5 (108-188)||(16411573-16411652)
chr5 (145-192)||(42076045-42076092)
chr5 (74-191)||(15160366-15160483)
chr5 (68-183)||(11833242-11833354)
chr5 (130-191)||(17535350-17535411)
chr5 (74-194)||(30655180-30655300)
chr5 (108-189)||(14117275-14117356)
chr5 (127-191)||(12004567-12004630)
[»] chr4 (21 HSPs)
chr4 (55-191)||(4881054-4881190)
chr4 (27-177)||(47065991-47066141)
chr4 (27-168)||(43600269-43600410)
chr4 (55-183)||(4904125-4904253)
chr4 (27-177)||(1684909-1685059)
chr4 (27-177)||(53300344-53300494)
chr4 (46-191)||(24558971-24559116)
chr4 (46-191)||(37750966-37751110)
chr4 (27-177)||(1152037-1152187)
chr4 (46-149)||(21539248-21539350)
chr4 (27-102)||(27739732-27739807)
chr4 (126-191)||(4923689-4923754)
chr4 (92-161)||(48464049-48464118)
chr4 (110-188)||(26075290-26075368)
chr4 (74-170)||(8573166-8573262)
chr4 (74-170)||(8575285-8575381)
chr4 (27-120)||(21317488-21317581)
chr4 (95-158)||(26075222-26075285)
chr4 (58-125)||(32514521-32514588)
chr4 (98-183)||(45641640-45641723)
chr4 (68-145)||(18941656-18941733)
[»] scaffold0684 (1 HSPs)
scaffold0684 (27-177)||(704-854)
[»] scaffold0069 (1 HSPs)
scaffold0069 (27-177)||(40655-40805)
[»] scaffold0576 (1 HSPs)
scaffold0576 (27-170)||(6699-6842)
[»] scaffold0002 (1 HSPs)
scaffold0002 (50-184)||(446263-446397)


Alignment Details
Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 27 - 215
Target Start/End: Complemental strand, 30089878 - 30089690
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30089878 cactttttgaatgttaaaaataatactataaaatgtaactaaagctctttagtaacatgggcttttcctaacaattgttcaaatgttactaaatataatc 30089779  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgtgagatagtggttcacaatgggat 215  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||  ||||||| ||||||||    
T  30089778 agtaacatttttcttgatttagtaacagttttcaagtgttactagatgtcaattattttgtagcgtgagatgctggttcataatgggat 30089690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 26608496 - 26608662
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| | ||| |||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  26608496 cactttttgattgttatagatagtactataaaatgcaactaaagctctttagtaacatgggctttatctaacaattgttcaaatgttactaaatttaatc 26608595  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgtg 193  Q
    ||||||| ||||||||||||  ||||| ||||||| |||||||||||||||||||||||||||||||    
T  26608596 agtaacatttttcttgatttcataacaattttcaaatgttactagatgtcaattatgttgtagtgtg 26608662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 26619061 - 26619225
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||||||||| |||||||||||| |||||||||||||  ||||||||||||| || ||||||| |||||||||||||||||| ||||| |||||    
T  26619061 cactttttgaatgttacaaataatactatcaaatgtaactaaagttctttagtaacataggatttacct-acaattgttcaaatgttaataaatttaatc 26619159  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgtg 193  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  26619160 agtaacatttttcttgatttagtaaca-atttcaagtgttactagatgtcaattatgttgtagtgtg 26619225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 26621048 - 26621214
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||  |||| |||||||||||| ||||||| |||||| |||||    
T  26621048 cactttttgaatgttacagataatactataaaatgtaactaaagctctttagtaacatggcttttatctaacaattgtttaaatgttgctaaatttaatc 26621147  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgtg 193  Q
    ||||||| ||||||| ||||||||||| |||||||||||||||||||||| |||| |||||||||||    
T  26621148 agtaacatttttcttaatttagtaacaattttcaagtgttactagatgtccattaagttgtagtgtg 26621214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 9242441 - 9242591
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||| ||||     
T  9242441 cactttttaattgttatagataatactataaaatgtaactaaaactctttagtaacatggactttatctaacaattgttcaagtgttacaaaatttaatt 9242540  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||| ||||||    
T  9242541 agtaacaattttcttgatttagttacaattttcaagtgttgctaaatgtca 9242591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 4685360 - 4685503
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| | ||| |||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||| |||||| ||||     
T  4685360 cactttttgattgttacagatagtactataaaatgtaactaaaacactttagtaatacgggctttacctaacaattgttcaagtgttgctaaatttaatt 4685459  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    | ||||| ||||||||||||||| ||| ||||||||||||||||    
T  4685460 actaacatttttcttgatttagttacaattttcaagtgttacta 4685503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 26224935 - 26225085
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| |  || || ||||||||| |||||||||||||||||||||  |||||||||||| |||||||||| ||||||||||| ||||     
T  26224935 cactttttgattgttacaggtagtattataaaatgaaactaaaactctttagtaacaccggctttacctaataattgttcaagtgttactaaatttaatt 26225034  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    |||| || ||||||||||||||| ||| ||||||||||||| || ||||||    
T  26225035 agtatcatttttcttgatttagttacaattttcaagtgttattaaatgtca 26225085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 26205372 - 26205522
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| || || |||||| ||||| |||||||||||||||||||||   |||||||||| ||||| ||||| ||||||||||| ||||     
T  26205372 cactttttgattgttacaagtagtactatcaaatgaaactaaaactctttagtaacaccagctttacctaccaatttttcaagtgttactaaatttaatt 26205471  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||| ||||||||||||||| | | ||||||||||| |||| ||||||    
T  26205472 agtaacatttttcttgatttagttataattttcaagtgtcactaaatgtca 26205522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 20277336 - 20277461
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatt 145  Q
    ||||||||||| |||||||||||| ||||||||||||| | ||||||||||||||||||| |||||||||||||| |||| | ||| | |||| ||||||    
T  20277336 ataatactatataatgtaactaaagctctttagtaacaggtgctttacctaacaattgtttaaatgttactaaatttaattaataatattttttttgatt 20277435  T
Q  146 tagtaacagttttcaagtgttactag 171  Q
    |||| ||| ||||| |||||||||||    
T  20277436 tagttacaattttcgagtgttactag 20277461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 10022267 - 10022117
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | ||| || |||||||||||||||||| |||||||||||| | |||||||||||||||||||||  ||||||||||  ||||     
T  10022267 cactttttaattgttacagatagtaatataaaatgtaactaaaattctttagtaacacgagctttacctaacaattgttcatgtgttactaaacttaatt 10022168  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||| ||||  ||||||||| ||| ||||||| |||||||| ||||||    
T  10022167 agtaacattttttctgatttagttacaattttcaattgttactaaatgtca 10022117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 153
Target Start/End: Complemental strand, 16086611 - 16086504
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatt 145  Q
    ||||||||||||||||| ||| || || || ||||||||| |||||||||||||||| ||||||||||| ||||| |||| ||||||| ||||  |||||    
T  16086611 ataatactataaaatgttactgaagctattaagtaacatgagctttacctaacaattattcaaatgttattaaatttaattagtaacagtttttctgatt 16086512  T
Q  146 tagtaaca 153  Q
    || |||||    
T  16086511 taataaca 16086504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 29932346 - 29932469
Alignment:
Q  67 aaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgtt 166  Q
    |||||||||||||  ||| ||||||||||||||||||| ||||||||| ||  |||||||| ||||| |||||  |||||||||| | ||||||| ||||    
T  29932346 aaaactctttagtctcataggctttacctaacaattgtccaaatgttattagttataatca-taacatttttcgcgatttagtaatatttttcaaatgtt 29932444  T
Q  167 actagatgtcaattatgttgtagtg 191  Q
    |||| |   ||||||||||||||||    
T  29932445 actaaaacgcaattatgttgtagtg 29932469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 16170379 - 16170264
Alignment:
Q  62 taactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaa 161  Q
    |||||||||| || ||||||||| |  ||||||||||||||||| || ||||||||||| |||| ||||||| ||||  |||||| || ||| |||||||    
T  16170379 taactaaaacactctagtaacattgattttacctaacaattgtttaagtgttactaaatttaattagtaacactttttgtgatttggttacaattttcaa 16170280  T
Q  162 gtgttactagatgtca 177  Q
    ||||| ||| ||||||    
T  16170279 gtgttgctaaatgtca 16170264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 27136031 - 27135958
Alignment:
Q  68 aaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttctt 141  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||||| || ||||||||| ||||| |||||||    
T  27136031 aaactctttagtaacacaggctttatctaacaattgttcaaatgttattagatataatcaataacatttttctt 27135958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 3234467 - 3234306
Alignment:
Q  30 tttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaa-ttgttcaaatgttactaaatataatcag 128  Q
    |||||||||||||  |||||||| || |||||| ||| || || |||||||||| || |||||||||| || ||| ||||||||||||||||  | | ||    
T  3234467 tttttgaatgttactaataatac-attaaatgttactgaagctatttagtaacacggactttacctaataaattggtcaaatgttactaaattaatttag 3234369  T
Q  129 taacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    || || |||| || ||||||| ||| ||||||| |||||||| || | ||||||| |||||||    
T  3234368 taccatttttttttatttagttacatttttcaactgttactaaatcttaattatgctgtagtg 3234306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 170
Target Start/End: Complemental strand, 8241721 - 8241598
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatt 145  Q
    |||||| ||||| |||||||| ||  |||||| ||||||||  |||| ||||||| ||||||||| ||| |||||  |||||||||| |||||||| |||    
T  8241721 ataatattataatatgtaactgaagttctttaataacatggattttatctaacaactgttcaaatattattaaattcaatcagtaac-attttcttcatt 8241623  T
Q  146 tagtaacagttttcaagtgttacta 170  Q
    |||| ||| ||| ||||| ||||||    
T  8241622 tagttacaatttccaagtattacta 8241598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 3374374 - 3374313
Alignment:
Q  97 acaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagtttt 158  Q
    |||||||||||||||||||| ||| |||||| ||||| |||||||||||| |||| ||||||    
T  3374374 acaattgttcaaatgttacttaatttaatcaataacatttttcttgatttggtaatagtttt 3374313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 14803120 - 14803181
Alignment:
Q  130 aacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||| ||||||||||||||| ||| |||||||  |||||||||| |||||| ||||||||||    
T  14803120 aacatttttcttgatttagttacatttttcaaccgttactagatctcaattttgttgtagtg 14803181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 15250114 - 15250175
Alignment:
Q  130 aacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||| ||||||||||||||| ||| |||||||  |||||||||| |||||| ||||||||||    
T  15250114 aacatttttcttgatttagttacatttttcaaccgttactagatctcaattttgttgtagtg 15250175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 170
Target Start/End: Complemental strand, 3365096 - 3364982
Alignment:
Q  57 aaatgtaactaaaactctttagtaacat-gggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacag 154  Q
    |||||| |||||||   ||||||||||  ||||||||||||||| |||| |||||||||| | || |||  |||||||||| || |||||||||| |||     
T  3365096 aaatgttactaaaatcatttagtaacaccgggctttacctaacatttgt-caaatgttacaagatctaaatagtaacaattgtttttgatttagttacaa 3364998  T
Q  155 ttttcaagtgttacta 170  Q
    |||| |||||||||||    
T  3364997 ttttaaagtgttacta 3364982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 24731759 - 24731876
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacagttttcaagtgttactaga 172  Q
    |||||||||||||| |||||||||| |||  ||||||||||| | || |||  ||||||| || || |||||||| | ||| |||| ||||||||||| |    
T  24731759 tttagtaacatgggttttacctaac-atttatcaaatgttacaagatctaaatagtaacatttatttttgatttaattacaattttgaagtgttactaaa 24731857  T
Q  173 tgtcaattatgttgtagtg 191  Q
    | |||  ||||||||||||    
T  24731858 tctcatatatgttgtagtg 24731876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 7711361 - 7711473
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacagttttcaagtgttactaga 172  Q
    |||||||||| |||||||||||||| |||  ||||||||||| | || |||  ||||||| || || |||||||||| ||| |||  ||||||||||| |    
T  7711361 tttagtaacacgggctttacctaac-attcatcaaatgttacaagatctaaatagtaacatttgtttttgatttagttacaatttagaagtgttactaaa 7711459  T
Q  173 tgtcaattatgttg 186  Q
    | ||| ||||||||    
T  7711460 tctcatttatgttg 7711473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 26701127 - 26701083
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaa 118  Q
    |||||||||| |||||||||||||||||||  ||| |||||||||    
T  26701127 tttagtaacacgggctttacctaacaattggccaactgttactaa 26701083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 2e-51; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 197
Target Start/End: Complemental strand, 24479295 - 24479125
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||||||||| | ||||||||||||||| |||||||| ||||||||||||| | ||||||||||| |||||||||||||||||||||| ||||     
T  24479295 cactttttgaatgttatagataatactataaaatataactaaagctctttagtaacacgagctttacctaagaattgttcaaatgttactaaatttaatt 24479196  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgtgagat 197  Q
    ||||||| || |||||||||||||| | |||||||||||||||| || ||||||||||| |||||| ||||    
T  24479195 agtaacagttatcttgatttagtaataattttcaagtgttactatatctcaattatgttatagtgtaagat 24479125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 7702569 - 7702409
Alignment:
Q  30 tttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagt 129  Q
    ||||| ||||||| | ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||| | |||| | |    
T  7702569 tttttaaatgttacagataatactacaaaatgtaactaaagctctttagtaatatgggctttacctaacaattgtacaaatgttactaattttaattaat 7702470  T
Q  130 aacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagt 190  Q
    |||| |||| || ||||||||| | |||||| |||||||||||||||||||||||||||||    
T  7702469 aacattttttttaatttagtaataattttcatgtgttactagatgtcaattatgttgtagt 7702409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 31342673 - 31342816
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| | ||| |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||| |||||| ||||     
T  31342673 cactttttgattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggctttatctaacaattgttcaagtgttgctaaatttaatt 31342772  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||    
T  31342773 agtaacatttttcttgatttagttacaattttcaagtgttacta 31342816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 30267146 - 30266996
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| |||||   ||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||||||| ||||     
T  30267146 cactttttgattgttacggatagtactataaaatgtaactaaaactctttggtaacacgggctttacctaacaattgttcaggtgttactaaatttaatt 30267047  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    | ||||| ||||||||||||||| ||| |||||||||||||||| ||||||    
T  30267046 actaacatttttcttgatttagttacaattttcaagtgttactaaatgtca 30266996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 46 - 186
Target Start/End: Complemental strand, 11017581 - 11017441
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatt 145  Q
    ||||||||||||| ||| ||| || || |||||||||| || |||||||||||||||| |||||||||||||||| |||| ||||||||||||||| |||    
T  11017581 ataatactataaagtgttactgaagctttttagtaacacggactttacctaacaattggtcaaatgttactaaatttaattagtaacaattttctttatt 11017482  T
Q  146 tagtaacagttttcaagtgttactagatgtcaattatgttg 186  Q
    ||||||| |||||||| ||||||||||| ||||||||||||    
T  11017481 tagtaacggttttcaattgttactagatctcaattatgttg 11017441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 40016734 - 40016591
Alignment:
Q  28 actttttgaatgttaaaaataatactataaaatgtaactaaaa-ctctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    ||||||||||||||| | ||||||| ||||||||||| ||||| ||||||||||| | || ||||||||||||||| ||||||||||||||||| |||||    
T  40016734 actttttgaatgttacagataatacaataaaatgtaattaaaatctctttagtaatagggtctttacctaacaattattcaaatgttactaaatttaatc 40016635  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    ||||||| ||| ||||||||| ||| | ||||||||||||||||    
T  40016634 agtaacattttacttgatttaataataattttcaagtgttacta 40016591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 44921077 - 44920951
Alignment:
Q  50 tactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagt 149  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |  ||||||||||| |||| |||||| ||||| ||||||||||    
T  44921077 tactataaaatgtaactaaaactctttagtaacacgagctttacctaacaattgtttaggtgttactaaatttaattagtaac-atttttttgatttagt 44920979  T
Q  150 aacagttttcaagtgttactagatgtca 177  Q
     ||| |||||||||||||||| ||||||    
T  44920978 tacaattttcaagtgttactaaatgtca 44920951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 22966665 - 22966501
Alignment:
Q  30 tttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagt 129  Q
    |||| |||||||| | |||||||| |||||||||||||||  |||||||||||| ||||||||||||||||||||| |||||| ||||||| | || |||    
T  22966665 ttttcgaatgttacagataatactctaaaatgtaactaaaggtctttagtaacaggggctttacctaacaattgtttaaatgtaactaaatttcattagt 22966566  T
Q  130 aacaatt--ttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgt 192  Q
    || | ||  || || ||||||||| |||||||||||||||||| || |||||||| |||||||||    
T  22966565 aatattttattttttatttagtaatagttttcaagtgttactaaatctcaattatattgtagtgt 22966501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 7718305 - 7718180
Alignment:
Q  50 tactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagt 149  Q
    ||||||||||||||| |||||||||||||||||| || ||||| ||||||||||||||  ||||||||||| |||| ||||| | |||||||||||||||    
T  7718305 tactataaaatgtaattaaaactctttagtaacacggactttatctaacaattgttcatgtgttactaaatttaattagtaatatttttcttgatttagt 7718206  T
Q  150 aacagttttcaagtgttactagatgt 175  Q
     ||| ||||||||| |||||| ||||    
T  7718205 tacaattttcaagtattactaaatgt 7718180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 175
Target Start/End: Complemental strand, 15513810 - 15513662
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| || || | ||| |||||||||||||||||||| || |||||||||| | |||||||||||||||||||||| |||||| |||| |||      
T  15513810 cactttttgattgatacagatagtactataaaatgtaactaaatctttttagtaacacgagctttacctaacaattgttcaagtgttacaaaatttaact 15513711  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgt 175  Q
    ||||||| ||||||||||||| | ||| |||| || |||||||| ||||    
T  15513710 agtaacatttttcttgatttacttacaatttttaattgttactaaatgt 15513662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 191
Target Start/End: Complemental strand, 41573527 - 41573372
Alignment:
Q  36 aatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaat 135  Q
    |||||||  |||||||||||||||||| | | ||    |||||||||| ||| ||||||||||||||||| || ||||||||||| |||| ||||||| |    
T  41573527 aatgttactaataatactataaaatgttattgaagtaatttagtaacacggggtttacctaacaattgtttaactgttactaaatttaattagtaacatt 41573428  T
Q  136 tttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||||||||||||| ||| ||||  | |||||||| || |||||| ||||||||||    
T  41573427 tttcttgatttagttacattttttgaatgttactaaatctcaattttgttgtagtg 41573372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 191
Target Start/End: Original strand, 15540317 - 15540420
Alignment:
Q  88 ctttacctaacaattgttcaaatgttactaaatataatcagtaaca-attttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttg 186  Q
    ||||||||| |||||||| ||||||||||| ||||||| ||||||| |||||  ||||||||||| | ||||||| |||||||| |  |||||||||| |    
T  15540317 ctttacctatcaattgtt-aaatgttactagatataattagtaacatatttttgtgatttagtaatacttttcaaatgttactaaagctcaattatgtcg 15540415  T
Q  187 tagtg 191  Q
    |||||    
T  15540416 tagtg 15540420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 189
Target Start/End: Complemental strand, 26734887 - 26734732
Alignment:
Q  31 ttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagta 130  Q
    ||||||||||||   |||||| | |||||||  |||||| ||||||| ||| |||| ||||||||||||||| ||||||| || |||||| |||| | ||    
T  26734887 ttttgaatgttactgataatattgtaaaatgatactaaagctctttaataatatggactttacctaacaattattcaaatattgctaaatttaattaata 26734788  T
Q  131 acaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtag 189  Q
    |   |||||||||||   ||||| ||||||| ||||| || || ||||||||| |||||    
T  26734787 agttttttcttgatt---taacaattttcaaatgttattatatctcaattatgctgtag 26734732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 27151215 - 27151343
Alignment:
Q  48 aatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgattta 147  Q
    ||||||||||||||| ||  || ||||||||| |||||||| ||     |||||||| ||| ||| ||||| | |||| ||| ||| |||||||||||||    
T  27151215 aatactataaaatgttaccgaagctctttagtgacatgggcgtt-----acaattgtacaagtgtcactaattttaattagtgacatttttcttgattta 27151309  T
Q  148 gtaacagttttcaagtgttactagatgtcaattat 182  Q
    ||||||  ||| || | ||||||||||||||||||    
T  27151310 gtaaca-atttaaattattactagatgtcaattat 27151343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 45404711 - 45404807
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacagttttcaagtgttacta 170  Q
    |||||||||| ||||||||||||||| ||| ||||||||||| | || |||  ||||||| || || |||||||||| ||| |||| |||||||||||    
T  45404711 tttagtaacacgggctttacctaacatttg-tcaaatgttacaagatctaaatagtaacagttgtttttgatttagttacaattttgaagtgttacta 45404807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 9e-51; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 30 - 191
Target Start/End: Original strand, 9633402 - 9633563
Alignment:
Q  30 tttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagt 129  Q
    ||||||||||||| | ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| |||| |||    
T  9633402 tttttgaatgttacatataatgctctaaaatgtaactaaaactctttagtaacaggggctttacctaacaattgtttaaatgtaactaaatttaattagt 9633501  T
Q  130 aacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||| |||| | |||||||||| |||||||||||||||||| || |||||||||||||||||    
T  9633502 aacatttttttcgatttagtaatagttttcaagtgttactaaatctcaattatgttgtagtg 9633563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 13846135 - 13845985
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| | ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| |||||| ||||     
T  13846135 cactttttgattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaatt 13846036  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||| ||||||||||||||| ||| |||||||||||| ||| ||||||    
T  13846035 agtaacatttttcttgatttagttacaattttcaagtgttgctaaatgtca 13845985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 168
Target Start/End: Complemental strand, 2550309 - 2550168
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||| |||| |||||| ||||     
T  2550309 cactttttgattgttacaaatagtactataaaatgtaactaaaacactttagtaacacaggctttacctaacaattgttcaagtgttgctaaatttaatt 2550210  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttac 168  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||    
T  2550209 agtaacatttttcttgatttagttacaattttcaagtgttac 2550168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 1627904 - 1628054
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | ||||||||||||||||||||||||||||||| |||||| || |||||| |||||||||||||| ||||||||||| ||||     
T  1627904 cactttttaattgttacatataatactataaaatgtaactaaaactcttttgtaacacggactttacttaacaattgttcaagtgttactaaatttaatt 1628003  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||| | ||||||||||||||| ||| |||||||||||||||| ||||||    
T  1628004 agtaatatttttcttgatttagttacaattttcaagtgttactaaatgtca 1628054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 7407711 - 7407854
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| |||||   ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| |||||| ||||     
T  7407711 cactttttgattgttactgatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaatt 7407810  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    ||||| | ||||||||||||||| ||| ||||||||||||||||    
T  7407811 agtaatatttttcttgatttagttacaattttcaagtgttacta 7407854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 191
Target Start/End: Complemental strand, 5498619 - 5498457
Alignment:
Q  28 actttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatca 127  Q
    ||||| |||||||||  |||||||| ||||||| | || |||||||||||||||||| || ||||||||||||||||||| | |||||||||| |||| |    
T  5498619 actttatgaatgttactaataatac-ataaaatattaccaaaactctttagtaacataggttttacctaacaattgttcagaagttactaaatttaatta 5498521  T
Q  128 gtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||||| ||||||||||||||| ||| |||| || |||||||| || |||||||||||||||||    
T  5498520 gtaacatttttcttgatttagttacattttttaattgttactaaatctcaattatgttgtagtg 5498457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 2943171 - 2943309
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||| ||||     
T  2943171 cactttttaattgttacagataatactataaaatgtaactaaaacactttagtaacacgggcttaacctaacaattgttcgaatgttactaaatttaatt 2943270  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgt 165  Q
    ||||||| ||||||||||||| | |||  ||||||||||    
T  2943271 agtaacatttttcttgatttaattacaaatttcaagtgt 2943309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 1654719 - 1654576
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| | ||| |||||||||||||||||||||| ||||| |||||  |||||||| |||||||||||||| |||| |||||| ||||     
T  1654719 cactttttgattgttacagatagtactataaaatgtaactaaaacactttaataacacaggctttacttaacaattgttcaagtgttgctaaatttaatt 1654620  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    ||||||| ||||||||||||||| ||| ||||||| ||||||||    
T  1654619 agtaacatttttcttgatttagttacaattttcaattgttacta 1654576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 190
Target Start/End: Complemental strand, 26707981 - 26707839
Alignment:
Q  48 aatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgattta 147  Q
    |||||||| |||||| ||| || |||||||||||||  | ||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  26707981 aatactatgaaatgttactgaacctctttagtaacagagactttacctaacaattgttcaaatgttactaaatttaattagtaacatttttcttgattta 26707882  T
Q  148 gtaacagttttcaagtgttactagatgtcaattatgttgtagt 190  Q
    |||||  ||||||| ||||||| |||  ||||||||| |||||    
T  26707881 gtaaccattttcaaatgttactcgattacaattatgtagtagt 26707839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 27259411 - 27259567
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||||||||| | |||||||| ||||||||||||||| |||||||||||||  ||           |||||||||||||||||||||| ||||     
T  27259411 cactttttgaatgttacagataatactctaaaatgtaactaaagctctttagtaacaaaggga---------aattgttcaaatgttactaaatttaatt 27259501  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgt 192  Q
    ||||||| ||| ||||||||||||| ||||||||| |||||||| || ||||||||||||||||||    
T  27259502 agtaacattttgcttgatttagtaatagttttcaattgttactaaatctcaattatgttgtagtgt 27259567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 165
Target Start/End: Complemental strand, 36035423 - 36035294
Alignment:
Q  36 aatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaat 135  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||| ||| ||||||||||| |||| ||||  | |    
T  36035423 aatgttacatataatactataaaatgtaactaaagctctttagtaacacgagctttacctaacaattgtacaattgttactaaatttaattagtattatt 36035324  T
Q  136 tttcttgatttagtaacagttttcaagtgt 165  Q
    ||||||||||||||| || |||| ||||||    
T  36035323 tttcttgatttagtaccaattttgaagtgt 36035294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 36035604 - 36035451
Alignment:
Q  30 tttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagt 129  Q
    ||||| ||||||| | |||||||||||||||||| ||||||||||| | ||||||||||||||||||||| ||| |        ||||||| | ||||||    
T  36035604 tttttaaatgttacatataatactataaaatgtagctaaaactcttaaataacatgggctttacctaacatttgat--------actaaatttgatcagt 36035513  T
Q  130 aacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |  | |||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  36035512 attatttttcttgatatagtaacaattttgaagtgttactagatgtcaattatgttgtagtg 36035451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 28745118 - 28745043
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaatt 102  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28745118 cactttttgaatgttacaaataatactctaaaatgtaactaaaactctttagtaacatgtgctttacctaacaatt 28745043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 191
Target Start/End: Original strand, 16457314 - 16457452
Alignment:
Q  53 tataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaac 152  Q
    |||||||||| ||| || || |||||||||| | ||||||||||||||||| |||||||||||||||| |||| ||||||| ||||||||||||||| ||    
T  16457314 tataaaatgttactgaagctttttagtaacacgagctttacctaacaattgctcaaatgttactaaatttaattagtaacatttttcttgatttagttac 16457413  T
Q  153 agttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    | ||||||| ||||  |  || ||||| |||||||||||    
T  16457414 aattttcaattgttgttgaatctcaatcatgttgtagtg 16457452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 169
Target Start/End: Complemental strand, 2180066 - 2179926
Alignment:
Q  31 ttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagta 130  Q
    |||||||||||||| |||| |||||||||| |||||||| ||||||||||||| ||  |||||| || ||||||||||||| | |||||| |||||| ||    
T  2180066 ttttgaatgttaaagataacactataaaatataactaaagctctttagtaacagggaatttacccaagaattgttcaaatgattctaaatttaatcatta 2179967  T
Q  131 aca--attttcttgatttagtaacagttttcaagtgttact 169  Q
    |||   |||| || ||||||||||| |||||| ||||||||    
T  2179966 acatttttttttttatttagtaacaattttcaggtgttact 2179926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 1613217 - 1613313
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    |||||||||| ||||||||||||| ||||| |||| ||||||||||| || | ||||||| ||||||||||||||| ||| ||||||| ||||||||    
T  1613217 tttagtaacaggggctttacctaaaaattggtcaactgttactaaatttatttagtaacatttttcttgatttagttacatttttcaactgttacta 1613313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 26735774 - 26735684
Alignment:
Q  30 tttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaat 120  Q
    ||||| |||||||  ||||||||||| |||||| | | || ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  26735774 ttttttaatgttactaataatactatgaaatgttattgaagctctttagtaacatggattttacctaacaattgttcaaatgttactaaat 26735684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 188
Target Start/End: Original strand, 27713405 - 27713554
Alignment:
Q  36 aatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaat 135  Q
    |||||||  |||||||||||||||| |  |||||||| ||||||||||| || ||| |||||||||| || |||||||||||||| |||| ||||||       
T  27713405 aatgttactaataatactataaaatattgctaaaactatttagtaacataggttttgcctaacaattatttaaatgttactaaatttaattagtaac--- 27713501  T
Q  136 tttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgta 188  Q
    ||| |||| ||||| ||| |||| || |||||||| || ||||||||| ||||    
T  27713502 ttttttgaattagttacattttttaaatgttactaaatctcaattatgctgta 27713554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 35083119 - 35082993
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| ||||| | | ||||||||||||| |||||||||| ||| ||  ||||| ||| |||| ||||||||||||||||| ||||||||| || |     
T  35083119 cactttttaaatgtcagagataatactataaattgtaactaaagctcatttctaacaagggttttatctaacaattgttcaaatattactaaatttattt 35083020  T
Q  127 agtaacaattttcttgatttagtaaca 153  Q
    | ||||| |||||||||||| ||||||    
T  35083019 actaacatttttcttgattttgtaaca 35082993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 36035090 - 36034998
Alignment:
Q  99 aattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||||| ||| ||||||||||| |||| ||||  | |||||||||||||||| || |||| |||||| | |||||||||||||||||||||||    
T  36035090 aattgtacaattgttactaaatttaattagtattatttttcttgatttagtaccaattttgaagtgtcattagatgtcaattatgttgtagtg 36034998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 23358460 - 23358556
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacagttttcaagtgttacta 170  Q
    |||||||||| ||||||||||||||| ||| ||||||||||| | || |||  ||||||| || || |||||||||| ||| |||| |||||||||||    
T  23358460 tttagtaacacgggctttacctaacatttg-tcaaatgttacaagatctaaatagtaacagttgtttttgatttagttacaattttgaagtgttacta 23358556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 23363281 - 23363377
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacagttttcaagtgttacta 170  Q
    |||||||||| ||||||||||||||| ||| ||||||||||| | || |||  ||||||| || || |||||||||| ||| |||| |||||||||||    
T  23363281 tttagtaacacgggctttacctaacatttg-tcaaatgttacaagatctaaatagtaacagttgtttttgatttagttacaattttgaagtgttacta 23363377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 4e-50; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 6801787 - 6801951
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| ||||||| |  ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||     
T  6801787 cacttttttaatgttacagctaatactctaaaatgtaactaaaactctttagtaacaggggctttacctaacaattgttcaactgttactaaatttaatt 6801886  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    ||||||| |||| |||||||||||| |||||||||||||||||| || |||  ||||||||||||    
T  6801887 agtaacatttttattgatttagtaatagttttcaagtgttactaaatctcatctatgttgtagtg 6801951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 14997761 - 14997600
Alignment:
Q  30 tttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagt 129  Q
    ||||||||||||| |  ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||| | ||| ||||    
T  14997761 tttttgaatgttacagttaatactataaaaggtaactaaagctctttagtaacatgggttttacctaacaattctacaaatgttactaattttaaccagt 14997662  T
Q  130 aacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||| ||||||||| ||||||| | ||||||||||| ||||||||||||| |||||||||||    
T  14997661 aacatttttcttgaattagtaataattttcaagtgtcactagatgtcaatcatgttgtagtg 14997600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 168
Target Start/End: Original strand, 45356069 - 45356210
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| | ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| |||||| ||||     
T  45356069 cactttttgattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaatt 45356168  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttac 168  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||    
T  45356169 agtaacatttttcttgatttagttacaattttcaagtgttac 45356210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 194
Target Start/End: Complemental strand, 25637769 - 25637620
Alignment:
Q  45 aataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgat 144  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| | |||| |||||| |||| ||||||| ||||||| ||    
T  25637769 aataatactataaaatgtaactaaaattctttagtaacacgggctttacctaacaattgttcgagtgttgctaaatttaattagtaacagttttcttaat 25637670  T
Q  145 ttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgtga 194  Q
    ||||| ||| |||||||||||||||| |||||| |  ||| |||||||||    
T  25637669 ttagttacaattttcaagtgttactaaatgtcattattgtagtagtgtga 25637620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 170
Target Start/End: Complemental strand, 25638927 - 25638807
Alignment:
Q  50 tactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagt 149  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||| |||||| |||| ||||||| |||||||||||||||    
T  25638927 tactataaaatgtaactaaaacactttagtaacatgggttttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagt 25638828  T
Q  150 aacagttttcaagtgttacta 170  Q
     ||| ||||||||||||||||    
T  25638827 tacaattttcaagtgttacta 25638807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 28249055 - 28249175
Alignment:
Q  50 tactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagt 149  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| |||||| |||| ||||||| |||||||||||||||    
T  28249055 tactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagt 28249154  T
Q  150 aacagttttcaagtgttacta 170  Q
     ||| ||||||||||||||||    
T  28249155 tacaattttcaagtgttacta 28249175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 17634428 - 17634578
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| | ||| ||||||||||||||||||||  |||||||||||| |||||||||||| ||||||||||| ||||| ||||| ||||     
T  17634428 cactttttgattgttacagatagtactataaaatgtaactaaatttctttagtaacacgggctttacctatcaattgttcaagtgttattaaatttaatt 17634527  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||| ||||||||||||||| ||| ||||||| |||||||| ||||||    
T  17634528 agtaacatttttcttgatttagttacaattttcaaatgttactaaatgtca 17634578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 5650902 - 5651066
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||| ||||||||||| | ||||||| |||||||| ||||||| || ||| |||||| ||| ||||||||||||||||||||||||| ||||||  |||     
T  5650902 cactatttgaatgttatagataataccataaaatgcaactaaagcttttttgtaacaagggttttacctaacaattgttcaaatgttgctaaattgaatt 5651001  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    ||||||| ||||||||||||||||| |||||||||||||||||  |  |||||||||||| ||||    
T  5651002 agtaacatttttcttgatttagtaatagttttcaagtgttactgaaactcaattatgttgcagtg 5651066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 19369867 - 19370017
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | |||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||| | |||| | |||| ||||     
T  19369867 cactttttaattgttacagataatactataaaatgtaactaaaactctttagtaacacggactttatctaacaattgttcgagtgttgcaaaatttaatt 19369966  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||| ||||||||||||||| ||| |||||||||||| ||| ||||||    
T  19369967 agtaacatttttcttgatttagttacaattttcaagtgttgctaaatgtca 19370017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 5528886 - 5528736
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | |||||||| |||||||||||||||||||||||||||||  | ||||| ||||||||||||  | |||| |||||| ||||     
T  5528886 cactttttaactgttacagataatactgtaaaatgtaactaaaactctttagtaacacagactttatctaacaattgtttgagtgttgctaaatttaatt 5528787  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||| ||||||    
T  5528786 agtaacatttttcttgatttagttacaattttcaagtgttactaaatgtca 5528736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 19448591 - 19448441
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | ||||||||||||||| |||||||||||||||||||||| || ||||| ||||||||||||| | |||| | |||| ||||     
T  19448591 cactttttaattgttacagataatactataaaatataactaaaactctttagtaacacggactttatctaacaattgttcgagtgttgcaaaatttaatt 19448492  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||| ||||||||||||||| ||| |||||||||||| ||| ||||||    
T  19448491 agtaacatttttcttgatttagttacaattttcaagtgttgctaaatgtca 19448441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 19532485 - 19532635
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | ||||||||||||||| |||||||||||||||||||||| || ||||| ||||||||||||| | |||| | |||| ||||     
T  19532485 cactttttaattgttacagataatactataaaatataactaaaactctttagtaacacggactttatctaacaattgttcgagtgttgcaaaatttaatt 19532584  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||| ||||||||||||||| ||| |||||||||||| ||| ||||||    
T  19532585 agtaacatttttcttgatttagttacaattttcaagtgttgctaaatgtca 19532635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 38 - 169
Target Start/End: Complemental strand, 29345564 - 29345432
Alignment:
Q  38 tgttaaaaataatactataaaatgtaactaaaactc-tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt 136  Q
    ||||| ||||||||||||||||||||||||||  |  |||||||| | ||||||||||||||||||||||||| |||||||||| |||| ||||| | ||    
T  29345564 tgttacaaataatactataaaatgtaactaaagtttgtttagtaagaggggctttacctaacaattgttcaaaggttactaaatttaattagtaatattt 29345465  T
Q  137 ttcttgatttagtaacagttttcaagtgttact 169  Q
    ||||||||||||| ||| ||||| |||||||||    
T  29345464 ttcttgatttagttacaattttcgagtgttact 29345432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 6223541 - 6223439
Alignment:
Q  30 tttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagt 129  Q
    ||||||||||||| | |||||| |||||| |||||||||||||||||||||||| | |||||||||||||||| | ||||||||||||||| ||||||||    
T  6223541 tttttgaatgttacatataatattataaagtgtaactaaaactctttagtaacacgcgctttacctaacaattttacaaatgttactaaatttaatcagt 6223442  T
Q  130 aac 132  Q
    |||    
T  6223441 aac 6223439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 177
Target Start/End: Complemental strand, 18767041 - 18766910
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatt 145  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||  | |||| | |||| |||| | ||| | |||||||||||    
T  18767041 ataatactataaaatgtaactaaaactctttagtaacacgtactttacctaacaattgtttgagtgttgcaaaatttaattaataatatttttcttgatt 18766942  T
Q  146 tagtaacagttttcaagtgttactagatgtca 177  Q
    |||| ||| |||||||||||| ||| ||||||    
T  18766941 tagttacaattttcaagtgttgctaaatgtca 18766910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 191
Target Start/End: Complemental strand, 6403710 - 6403572
Alignment:
Q  53 tataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaac 152  Q
    |||||||||| ||| || || |||| ||||| ||||||||||||||||||| |||||||||||||||| |||| ||||||| ||||||| ||||||| ||    
T  6403710 tataaaatgttactgaagctttttaataacacgggctttacctaacaattgctcaaatgttactaaatttaattagtaacatttttcttaatttagttac 6403611  T
Q  153 agttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |  |||||| |||||||| || | ||| |||||||||||    
T  6403610 aaatttcaattgttactaaatcttaatcatgttgtagtg 6403572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 29553725 - 29553607
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagat 173  Q
    |||||||||| | |||||| |||||||||| ||||||||| |||||| |||| ||||||| |||||||||||| || ||| ||||||| |||||||| ||    
T  29553725 tttagtaacacgcgctttaactaacaattgctcaaatgttgctaaatttaattagtaacatttttcttgatttggttacaattttcaattgttactaaat 29553626  T
Q  174 gtcaattatgttgtagtgt 192  Q
     ||||| ||||||||||||    
T  29553625 ctcaatcatgttgtagtgt 29553607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 188
Target Start/End: Complemental strand, 5000778 - 5000661
Alignment:
Q  71 ctctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    |||||||||||||  || || ||||||| |||| |||||||||||||||| |||| ||||||||||||  |||| |||||||| ||||||| ||| ||||    
T  5000778 ctctttagtaacacaggtttcacctaactattgctcaaatgttactaaatttaattagtaacaattttgatgatgtagtaacaattttcaattgtaacta 5000679  T
Q  171 gatgtcaattatgttgta 188  Q
    ||| ||||||||||||||    
T  5000678 gatctcaattatgttgta 5000661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 189
Target Start/End: Original strand, 31369082 - 31369225
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatt 145  Q
    ||||| ||||||||||||||| |||||||||||||||||  ||||||| ||||| ||||| |||||| ||||||  |||| ||||||| || || |||||    
T  31369082 ataatcctataaaatgtaactgaaactctttagtaacataagctttacataacatttgtttaaatgtcactaaacttaattagtaacatttatcgtgatt 31369181  T
Q  146 tagtaacagttttcaagtgttactagatgtcaattatgttgtag 189  Q
    ||||  || ||||||| ||||| || || |||| | ||||||||    
T  31369182 tagtttcatttttcaaatgttattaaatctcaactttgttgtag 31369225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 191
Target Start/End: Complemental strand, 31347481 - 31347328
Alignment:
Q  38 tgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattt 137  Q
    ||||| |||||||  |||||||||| ||| ||  |  |||||||||  || |||| |||||||||| |||||||||||||||| |||| |||| || |||    
T  31347481 tgttacaaataatgatataaaatgttactgaagatggttagtaacacaggatttatctaacaattgatcaaatgttactaaatttaattagtagcatttt 31347382  T
Q  138 tcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    ||||||||| || ||| ||||||| |||||||| || ||||| |||||| ||||    
T  31347381 tcttgatttggttacaattttcaattgttactaaatttcaatcatgttgcagtg 31347328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 194
Target Start/End: Complemental strand, 26173896 - 26173778
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagat 173  Q
    |||||||| | ||||||||||||||| || | || | ||||||||||||||  |||||||  |||||| ||||||||| | |||| ||||||||||| ||    
T  26173896 tttagtaatacgggctttacctaacatttatacagaagttactaaatataaatagtaaca--tttctttatttagtaatattttttaagtgttactaaat 26173799  T
Q  174 gtcaattatgttgtagtgtga 194  Q
     ||| || |||||||||||||    
T  26173798 ctcatttttgttgtagtgtga 26173778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 7292870 - 7292813
Alignment:
Q  134 attttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||||| ||||| ||||||| ||||||||||||| || ||||||||||||||||||||    
T  7292870 attttcatgattcagtaacaattttcaagtgttattaaatgtcaattatgttgtagtg 7292813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 29118587 - 29118650
Alignment:
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    ||||||| | |||||| ||||| |||| |||| |||||||||||||| |||||||| ||||||||    
T  29118587 agtaacattcttcttggtttagcaacaatttt-aagtgttactagatctcaattatattgtagtg 29118650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 18308291 - 18308126
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||||||||| ||| |||||||||||||||||||||| | ||| |||||||  |||||||||||||||||||  |||||||| ||| | |||||    
T  18308291 cactttttgaatgttacaaacaatactataaaatgtaactaaagcccttcagtaacacaggctttacctaacaattgtagaaatgttaataattgtaatc 18308192  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgt 192  Q
     |||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  18308191 tgtaacatttttcttgatttagtaacaattttcaaatgttactagatgtcaattatgttttagtgt 18308126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 191
Target Start/End: Complemental strand, 12190077 - 12189931
Alignment:
Q  45 aataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgat 144  Q
    |||||||||||||||  | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||| | ||||||||||    
T  12190077 aataatactataaaaaattactaaaactctttagtaacacgggctttacctaacaattgttcaaatgttactaaatttaattagtaatatttttcttgat 12189978  T
Q  145 ttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    ||||| ||| |||| || |||| |||  | |||||||||||||||||    
T  12189977 ttagttacattttttaattgtttctaattctcaattatgttgtagtg 12189931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 28637023 - 28636881
Alignment:
Q  50 tactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagt 149  Q
    |||||||||||||||||||| |||||||| ||||  | ||||||||||||||| |||||||||||||||||  ||| ||||||| |||||||||||||||    
T  28637023 tactataaaatgtaactaaatctctttagcaacagtgactttacctaacaattattcaaatgttactaaattgaattagtaacatttttcttgatttagt 28636924  T
Q  150 aacagttttcaagtgttactagatgtcaattatgttgtagtgt 192  Q
     ||| |||| || ||||||||||| | ||||||||||||||||    
T  28636923 tacaatttttaaatgttactagatcttaattatgttgtagtgt 28636881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 39368596 - 39368761
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaa-tgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataat 125  Q
    |||||||| |||||||   |||||||||||||| ||||||| || |||||||||| |||| ||||| ||||||||||||  |||||| ||||| | ||||    
T  39368596 cactttttaaatgttactgataatactataaaaatgtaactgaagctctttagtagcatgtgctttgcctaacaattgtataaatgtgactaattttaat 39368695  T
Q  126 cagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
     ||||||| ||||||||||||||||||| |||||| | ||||||||||||||||||||||| ||||    
T  39368696 tagtaacatttttcttgatttagtaacatttttcatgggttactagatgtcaattatgttgcagtg 39368761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 51758896 - 51758746
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | |||||||||||||||||||||||||||||||||||| | | ||||||||||| |||||||| | |||| |||||| ||||     
T  51758896 cactttttaattgttacagataatactataaaatgtaactaaaactctttagtaatacgagctttacctaataattgttcgagtgttgctaaatttaatt 51758797  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    | ||||| ||||||||||||||| ||| ||||||| |||||||| ||||||    
T  51758796 actaacatttttcttgatttagttacaattttcaaatgttactaaatgtca 51758746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 897594 - 897434
Alignment:
Q  30 tttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagt 129  Q
    ||||| ||||||| |||||||  ||||||||||||||| | |||||||||||||||  ||| ||||||||||||||||| ||||||||||| |||| ||     
T  897594 ttttttaatgttacaaataattgtataaaatgtaactatagctctttagtaacatgaactt-acctaacaattgttcaattgttactaaatttaattagg 897496  T
Q  130 aacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||| ||||||| ||||||||||| ||||||| ||| |||| || | |||||||||||||||    
T  897495 aacatttttcttcatttagtaacaattttcaactgtaactatatcttaattatgttgtagtg 897434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 16222881 - 16222771
Alignment:
Q  67 aaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgtt 166  Q
    ||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| | || ||||||| ||||||||||||||| ||| ||||||| ||||    
T  16222881 aaaactctttagtaacacgggctttacctaacaattattcaagtgttactaaattttattagtaacatttttcttgatttagttacaattttcaaatgtt 16222782  T
Q  167 actagatgtca 177  Q
    |||| ||||||    
T  16222781 actaaatgtca 16222771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 191
Target Start/End: Original strand, 5911679 - 5911785
Alignment:
Q  85 gggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgt 184  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| | | |||||||||||||||| ||   ||| ||||    
T  5911679 gggctttacctaacaattgttcaagtgttactaaatttaatcagtaacatttttcttgatttagttaaaattttcaagtgttactatatcataatcatgt 5911778  T
Q  185 tgtagtg 191  Q
    |||||||    
T  5911779 tgtagtg 5911785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 1844089 - 1843981
Alignment:
Q  33 ttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaac 132  Q
    |||| ||||| | |||||||||||||||| || |||| | ||| ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||    
T  1844089 ttgattgttacagataatactataaaatgcaattaaagcccttcagtaacatggggtttacctaacaattgttcaaatgttactaaattcaatcagtaac 1843990  T
Q  133 aattttctt 141  Q
    | |||||||    
T  1843989 atttttctt 1843981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 192
Target Start/End: Complemental strand, 17113019 - 17112903
Alignment:
Q  76 tagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagatgt 175  Q
    |||||||||| |||||| ||||||||||||||| |||||| |||| |||  ||||  | ||||||||||||||||||| ||||||| | ||||||||| |    
T  17113019 tagtaacatgagctttaactaacaattgttcaagtgttacaaaatttaactagtactatttttcttgatttagtaacaattttcaattattactagattt 17112920  T
Q  176 caattatgttgtagtgt 192  Q
    |||||||||||||||||    
T  17112919 caattatgttgtagtgt 17112903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 37097371 - 37097447
Alignment:
Q  101 ttgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    |||||||||||||||||||| | |||||||||| ||||||||||||||| ||| |||||||||||||||| ||||||    
T  37097371 ttgttcaaatgttactaaattttatcagtaacatttttcttgatttagttacaattttcaagtgttactaaatgtca 37097447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 3399718 - 3399643
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagt 149  Q
    ||||||||||| |  |||||||||||||||||||||||||||||||| |||| ||||||| ||||| |||||||||    
T  3399718 tttagtaacatagattttacctaacaattgttcaaatgttactaaatttaattagtaacatttttcatgatttagt 3399643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 15214409 - 15214327
Alignment:
Q  88 ctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    ||||||| ||||||||||||||| ||||||||| |||| ||||| | |||||||||||||||  || ||||||||||||||||    
T  15214409 ctttacccaacaattgttcaaatattactaaatttaattagtaaaatttttcttgatttagttgcaattttcaagtgttacta 15214327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 161
Target Start/End: Complemental strand, 13208716 - 13208621
Alignment:
Q  66 taaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaa 161  Q
    |||||| ||||||||||| ||| ||||||||||||| |||||| || |||||||| |||| ||||||| ||||||| ||||| | ||| |||||||    
T  13208716 taaaacactttagtaacacgggttttacctaacaatggttcaagtggtactaaatttaattagtaacatttttcttaatttaattacaattttcaa 13208621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 15204692 - 15204615
Alignment:
Q  72 tctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagt 149  Q
    |||||||||  ||||  |||||||||||||||||||| ||||||||||| || | || |||| |||||||||||||||    
T  15204692 tctttagtagaatggattttacctaacaattgttcaagtgttactaaatttagttagcaacatttttcttgatttagt 15204615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 28 - 170
Target Start/End: Complemental strand, 16734947 - 16734805
Alignment:
Q  28 actttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatca 127  Q
    ||||||||| ||||| | ||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |    
T  16734947 actttttgattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaaatgttgctaaatttaatta 16734848  T
Q  128 gtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||    
T  16734847 gtaacatttttcttgatttagttacaattttcaagtgttacta 16734805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 12591976 - 12591826
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |  |||||||||| ||||     
T  12591976 cactttttaattgttacagataatactataaattgtaactaaaactctttagtaacacgggctttacctaacaattgttcgagcgttactaaatttaatt 12591877  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    | ||||| ||||||||||||||| ||| |||||||||||||||| ||||||    
T  12591876 actaacatttttcttgatttagttacaattttcaagtgttactaaatgtca 12591826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 201
Target Start/End: Original strand, 14669303 - 14669477
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||| | |||| | |||| ||||     
T  14669303 cactttttaattgttacaaataatactataaaatgtaactaaaactctttagtaacacggactttacctaacaattattcgagtgttgcaaaatttaatt 14669402  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgtgagatagtg 201  Q
    ||||||| ||||||||||||||| ||| |||||||||||| ||| |||||| |  ||| ||||||||||| ||||    
T  14669403 agtaacatttttcttgatttagttacaattttcaagtgttgctaaatgtcattattgtagtagtgtgagaaagtg 14669477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 187
Target Start/End: Original strand, 23904309 - 23904469
Alignment:
Q  27 cactttttgaatgttaaaa-ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataat 125  Q
    ||||||||||||||||| | ||||||||||||| ||||| |||| |||||| |||| | ||||||||||||||||||||||||||||||||||||  | |    
T  23904309 cactttttgaatgttaagagataatactataaagtgtaa-taaacctcttttgtaagaggggctttacctaacaattgttcaaatgttactaaattgatt 23904407  T
Q  126 cagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgt 187  Q
     ||||||  ||||||| |||||||| || ||||||||||||||||||| |||||||||||||    
T  23904408 tagtaacttttttcttcatttagtagcaattttcaagtgttactagatctcaattatgttgt 23904469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 9631141 - 9631273
Alignment:
Q  56 aaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagt 155  Q
    ||||||||||||||||||| |||||||| ||||| | |||||||||||||||||||||||||||| || | ||||||  | ||||||||||||||| |||    
T  9631141 aaaatgtaactaaaactctatagtaacaggggctatgcctaacaattgttcaaatgttactaaatttacttagtaacgttcttcttgatttagtaatagt 9631240  T
Q  156 tttcaagtgttactagatgtcaattatgttgta 188  Q
    ||||||||||||||| || ||||||||||||||    
T  9631241 tttcaagtgttactaaatctcaattatgttgta 9631273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 170
Target Start/End: Original strand, 11936747 - 11936867
Alignment:
Q  50 tactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagt 149  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||| |||||| |||| ||||||| |||||||||||||||    
T  11936747 tactataaaatgtaactaaaacactttagtaacacgggctttatctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagt 11936846  T
Q  150 aacagttttcaagtgttacta 170  Q
     ||| ||||||||||||||||    
T  11936847 tacaattttcaagtgttacta 11936867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 15361858 - 15361715
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| | ||| ||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||| |||| |||||| ||||     
T  15361858 cactttttgattgttacagatagtactataaaatgtaactaaaacattttagtaacaccggctttacctaacaattgttcaagtgttgctaaatttaatt 15361759  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    ||||||| ||||||||||||||| ||| |||| |||||||||||    
T  15361758 agtaacatttttcttgatttagttacaatttttaagtgttacta 15361715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 46 - 170
Target Start/End: Complemental strand, 6684217 - 6684094
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatt 145  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||| |||| ||||||| |||||||||||    
T  6684217 ataatactataaaatgtaactaaaactctttagtaacatggactttacctaacaa-tgttcgagtgttactaaatttaattagtaacatttttcttgatt 6684119  T
Q  146 tagtaacagttttcaagtgttacta 170  Q
     ||| ||| |||| |||||||||||    
T  6684118 aagttacaatttttaagtgttacta 6684094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 46 - 192
Target Start/End: Original strand, 23264472 - 23264620
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatt 145  Q
    ||||||||||||| | |  || || ||||||||||||| ||  |||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  23264472 ataatactataaagttttgctgaagctctttagtaacacggattttacctaacaattgttcgaatgttactaaatttaattagtaacaattttcttgatt 23264571  T
Q  146 tagtaacagttttca--agtgttactagatgtcaattatgttgtagtgt 192  Q
    |||||||| ||||||  | | ||||||||| ||||||||||||||||||    
T  23264572 tagtaacaattttcaatattcttactagatctcaattatgttgtagtgt 23264620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 17719680 - 17719830
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | ||||||||||||| |||||||||||||||||||||||| || ||||| ||||||||||||| | |||| | |||  ||||     
T  17719680 cactttttaattgttacagataatactataaattgtaactaaaactctttagtaacacggactttatctaacaattgttcgagtgttgcaaaaattaatt 17719779  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||| ||||||||||||||| ||| |||||||||||| ||| ||||||    
T  17719780 agtaacatttttcttgatttagttacaattttcaagtgttgctaaatgtca 17719830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 192
Target Start/End: Original strand, 29667899 - 29668039
Alignment:
Q  54 ataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttc--ttgatttagtaa 151  Q
    ||||||||| |||||| ||||||| |||||   |||||||||||||||||||||||||||||||||| |||| ||||||| |||||  ||||||| || |    
T  29667899 ataaaatgttactaaatctctttaataacacaagctttacctaacaattgttcaaatgttactaaatttaattagtaacatttttcttttgatttcgtta 29667998  T
Q  152 cagttttcaagtgttactagatgtcaattatgttgtagtgt 192  Q
    || ||||||| |||||| |||| ||||||||||||||||||    
T  29667999 caattttcaattgttacaagatctcaattatgttgtagtgt 29668039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 11948727 - 11948835
Alignment:
Q  50 tactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagt 149  Q
    |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||| |||||| |||| ||||||| |||||||||||||||    
T  11948727 tactataaaatgtaactaaaacactttagtaacacgggctttatctaacaattgttcaagtgttgctaaatttaattagtaacatttttcttgatttagt 11948826  T
Q  150 aacagtttt 158  Q
     ||| ||||    
T  11948827 tacaatttt 11948835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 30 - 191
Target Start/End: Original strand, 4485525 - 4485686
Alignment:
Q  30 tttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagt 129  Q
    ||||| |||||||  |||||| ||||| | ||| ||||||||| |||| ||||| || ||||||||||||||| ||||||| ||||||||| |||| |||    
T  4485525 ttttttaatgttactaataattctatagattgttactaaaactatttaataacacggactttacctaacaattattcaaatattactaaatttaattagt 4485624  T
Q  130 aacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    | || ||| |||||||||||  || ||||||| || |||||||| | |||||||||||||||    
T  4485625 accattttccttgatttagttgcatttttcaactgatactagatcttaattatgttgtagtg 4485686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 191
Target Start/End: Complemental strand, 1942693 - 1942548
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatt 145  Q
    ||||||||||||||||||||||||  | |||| |||||  || |||||||| |||||| |||||||||| ||||| | |||||||| | |||||||||||    
T  1942693 ataatactataaaatgtaactaaagatatttaataacaaaggttttacctagcaattgctcaaatgttattaaattttatcagtaatatttttcttgatt 1942594  T
Q  146 tagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||| ||| || |||| |||||| | || | |||||||||||||||    
T  1942593 tagttacaattatcaaatgttaccaaatcttaattatgttgtagtg 1942548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 10070786 - 10070676
Alignment:
Q  38 tgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattt 137  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| || |||||| |||||||| ||  | ||||| ||||| |||| |||||||||||    
T  10070786 tgttacaaataatactataaaatgtaactaaaact-tttagtaacacggactttacgtaacaattatttgagtgttattaaatttaattagtaacaattt 10070688  T
Q  138 tcttgatttagt 149  Q
    | ||||||||||    
T  10070687 tgttgatttagt 10070676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 169
Target Start/End: Complemental strand, 34374970 - 34374826
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaatt--gttcaaatgttactaaatataa 124  Q
    |||||| |||||||||   ||||||||||||||| | ||| ||||||||||||||||  |  ||| ||||||||||  ||||||||||||| ||||||||    
T  34374970 cactttatgaatgttactcataatactataaaatattactcaaactctttagtaacacagattttgcctaacaattttgttcaaatgttacaaaatataa 34374871  T
Q  125 tcagtaacaattttcttgatttagtaacagttttcaagtgttact 169  Q
    | ||||||| ||||||||||||| | ||| |||| || |||||||    
T  34374870 ttagtaacatttttcttgatttaattacattttttaattgttact 34374826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 10935776 - 10935901
Alignment:
Q  64 actaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaaca-gttttcaag 162  Q
    |||||||||| ||| || |||| | ||||||||||||||||||||||||||||  ||||||| ||||||| ||||| ||||||||||| |  |||||||     
T  10935776 actaaaactccttatta-catgagttttacctaacaattgttcaaatgttactggatataattagtaacatttttcatgatttagtaatattttttcaaa 10935874  T
Q  163 tgttactagatgtcaattatgttgtag 189  Q
     |||| ||||| |||||| ||||||||    
T  10935875 cgttattagatctcaattttgttgtag 10935901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 15690529 - 15690432
Alignment:
Q  79 taacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtc 176  Q
    |||||||| ||||| ||||||||||||  | ||| ||||||| |||| ||||||| ||||||||||||||| ||| ||||||| |||||||| |||||    
T  15690529 taacatggactttagctaacaattgtttgagtgtcactaaatttaattagtaacatttttcttgatttagttacaattttcaaatgttactaaatgtc 15690432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 4591229 - 4591138
Alignment:
Q  91 tacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattat 182  Q
    |||||||||||||| |||| |||| | | | ||||| |||||| ||||||||||||||||| | ||||||| |||||||| |||| ||||||    
T  4591229 tacctaacaattgtacaaaggttattgattttaatcggtaacatttttcttgatttagtaataattttcaaatgttactaaatgttaattat 4591138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 30481229 - 30481311
Alignment:
Q  71 ctctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaaca 153  Q
    |||||||||||||||  ||||| |||| | |||||||| |||||||| || |||| || |||| |||||||||||||||||||    
T  30481229 ctctttagtaacatgatctttatctaaaatttgttcaattgttactagatttaattagcaacatttttcttgatttagtaaca 30481311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 6673675 - 6673737
Alignment:
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtag 189  Q
    ||||||| ||||||||||||||| ||| ||||||| |||||||| || | |||||||||||||    
T  6673675 agtaacatttttcttgatttagttacatttttcaactgttactaaatcttaattatgttgtag 6673737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 28736608 - 28736729
Alignment:
Q  72 tctttagtaacatgggctttacctaacaattgttcaaatgttac--taaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttact 169  Q
    |||||||| |||  |||||||| ||||||||||||||||||  |  || ||||||||||||  | ||||| ||||||| || || |||| || |||||||    
T  28736608 tctttagttacaaaggctttacttaacaattgttcaaatgtcgctatatatataatcagtactatttttcgtgatttaatagcattttttaaatgttact 28736707  T
Q  170 agatgtcaattatgttgtagtg 191  Q
    |||| |||| | ||||||||||    
T  28736708 agatttcaactttgttgtagtg 28736729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 2668457 - 2668553
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacagttttcaagtgttacta 170  Q
    |||||||||| ||||||||||||||| ||| ||||||||||| | || |||  ||||||| || || |||||||||| ||| |||| |||||||||||    
T  2668457 tttagtaacacgggctttacctaacatttg-tcaaatgttacaagatctaaatagtaacagttgtttttgatttagttacaattttgaagtgttacta 2668553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 8496625 - 8496706
Alignment:
Q  45 aataatactataa-aatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataat 125  Q
    |||||||||| || ||||| ||| ||||||||||||||||| |  |||  || |||||||||||||||||| ||||||||||    
T  8496625 aataatactaaaataatgttactgaaactctttagtaacatagattttgtctgacaattgttcaaatgttattaaatataat 8496706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 14003969 - 14003873
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacagttttcaagtgttacta 170  Q
    |||||||||| ||||||||||||||| ||| ||||||||||| | || |||  ||||||| || || |||||||||| ||| |||| |||||||||||    
T  14003969 tttagtaacacgggctttacctaacatttg-tcaaatgttacaagatctaaatagtaacagttgtttttgatttagttacaattttgaagtgttacta 14003873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 27969921 - 27970017
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    ||||||||||| | |||||||||||| ||||| ||||||| ||||||  ||  |||||||  ||||||| ||| || ||| ||||||| ||||||||    
T  27969921 tttagtaacatagactttacctaacatttgttgaaatgttgctaaattgaaatagtaacatatttcttgctttggttacaattttcaaatgttacta 27970017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 6346862 - 6346980
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacagttttcaagtgttactaga 172  Q
    ||||||||||| ||||||||||||| |||  ||||||||||| |||| |||  ||||||| || || |||||||||| ||| |||| | ||||||||| |    
T  6346862 tttagtaacataggctttacctaac-atttatcaaatgttacaaaatttaaatagtaacatttatttttgatttagttacaattttaatgtgttactaaa 6346960  T
Q  173 tgtcaattatgttgtagtgt 192  Q
    | |||  ||||||| |||||    
T  6346961 tctcatatatgttgcagtgt 6346980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 2941088 - 2941043
Alignment:
Q  88 ctttacctaacaattgttcaaatgttactaaatataatcagtaaca 133  Q
    |||||||||||| ||| ||||||||||||||| ||||| |||||||    
T  2941088 ctttacctaacatttgctcaaatgttactaaacataattagtaaca 2941043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 11655033 - 11655098
Alignment:
Q  68 aaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaaca 133  Q
    |||| ||||||||||||  | ||||||||| ||||||| ||||||||||  ||||||| |||||||    
T  11655033 aaaccctttagtaacatatgttttacctaataattgtttaaatgttactcgatataattagtaaca 11655098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 1e-46; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 17037686 - 17037536
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | ||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||||     
T  17037686 cactttttaattgttacagataatactataaaatgtaactaaaactctttagtaacactgactttacctaacaattgttcaaatgttactaaatttaatt 17037587  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||| ||||||||||||||| ||  |||||||||||||||| ||||||    
T  17037586 agtaacatttttcttgatttagttacgattttcaagtgttactaaatgtca 17037536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 27 - 170
Target Start/End: Original strand, 5079021 - 5079164
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| | ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| |||||| ||||     
T  5079021 cactttttgattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaatt 5079120  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||    
T  5079121 agtaacatttttcttgatttagttacaattttcaagtgttacta 5079164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 27 - 191
Target Start/End: Complemental strand, 19985138 - 19984974
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| | ||| | ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||     
T  19985138 cactttttgattattacatataatactataaaatgtaactaaaactctttagtaacctggactttacctaacaattattcaaatgttactaaatctaatt 19985039  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    ||||||| ||| ||||||||||| ||  ||||| ||||||||||| |   |||||||||||||||    
T  19985038 agtaacattttccttgatttagttaccattttcgagtgttactagttcataattatgttgtagtg 19984974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 30786410 - 30786245
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| ||||||||  ||||||||| |||||| || |||||||||| ||  |||||||||||||| |||||||||||||||||  ||||    
T  30786410 cacttttttattgttacaaataataacataaaatgtgactaaatctttttagtaacaaggcatttacctaacaattattcaaatgttactaaattgaatc 30786311  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgt 192  Q
    ||||||| ||||||||||| ||| ||| ||||||||||||||||||| | ||||||||||||||||    
T  30786310 agtaacatttttcttgattaagttacaattttcaagtgttactagatcttaattatgttgtagtgt 30786245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 31571173 - 31571008
Alignment:
Q  30 tttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttc----aaatgttactaaatataat 125  Q
    |||||||||||||   ||||||||||| |||| | ||||| ||||||||||||||||| |||||||||||||||| |    | |||||||||| | ||||    
T  31571173 tttttgaatgttaccgataatactatataatggatctaaagctctttagtaacatgggttttacctaacaattgtacatatatatgttactaattttaat 31571074  T
Q  126 cagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||||||| |||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  31571073 cagtaacatttttcttgttttaataacaattttcaagtgttactagatgtcaattatgttgtagtg 31571008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 12042133 - 12042299
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatggg-ctttacctaacaattgttcaaatgttactaaatataat 125  Q
    |||||||| | | ||| |||||||| ||||||||||||||||||||||||||||| | |   |||||||||||||||||||||||||||||||||  |||    
T  12042133 cacttttttattattacaaataataatataaaatgtaactaaaactctttagtaataggtttctttacctaacaattgttcaaatgttactaaattgaat 12042232  T
Q  126 cagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgt 192  Q
    |||||||| ||||||||||||||| ||| ||||||| | ||||| ||| | ||||||||||||||||    
T  12042233 cagtaacatttttcttgatttagttacaattttcaaatattactggatcttaattatgttgtagtgt 12042299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 7410967 - 7410824
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| |||||| ||||     
T  7410967 cactttttgattgttacaaattgtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagtgttgctaaatttaatt 7410868  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    ||||||| |||| |||||||||| ||| |||| || ||||||||    
T  7410867 agtaacattttttttgatttagttacaattttgaaatgttacta 7410824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 23679584 - 23679434
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| |||||||||||||||||||||||||||||||||||||||| |  ||||| |||| |||||||| |||||| | |||| ||||     
T  23679584 cactttttaattgttacaaataatactataaaatgtaactaaaactctttagtaacacgaactttatctaataattgttcgaatgttgcaaaatttaatt 23679485  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    | ||||| ||||||||||||||| ||| |||||||||||| ||| ||||||    
T  23679484 aataacatttttcttgatttagttacaattttcaagtgttgctaaatgtca 23679434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 23855227 - 23855377
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| |||||||||||||||||||||||||||||||||||||||| |  ||||| |||| |||||||| |||||| | |||| ||||     
T  23855227 cactttttaattgttacaaataatactataaaatgtaactaaaactctttagtaacacgaactttatctaataattgttcgaatgttgcaaaatttaatt 23855326  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    | ||||| ||||||||||||||| ||| |||||||||||| ||| ||||||    
T  23855327 aataacatttttcttgatttagttacaattttcaagtgttgctaaatgtca 23855377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 9354393 - 9354510
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagat 173  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||| |||| ||||||| ||||||||||| ||| ||| ||||||| |||||||| ||    
T  9354393 tttagtaacatgggctttacctaacaattgctcaaatgttattaaatttaattagtaacatttttcttgattcagttacaattttcaattgttactaaat 9354492  T
Q  174 gtcaattatgttgtagtg 191  Q
     ||||| |||||||||||    
T  9354493 ctcaatcatgttgtagtg 9354510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 9333565 - 9333682
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagat 173  Q
    ||||||||||| | |||||||||||||||| |||||||||||||||| |||| ||||||| |||||||||||| || ||| ||||||| |||||| | ||    
T  9333565 tttagtaacatcgactttacctaacaattgctcaaatgttactaaatttaattagtaacatttttcttgattttgttacaattttcaattgttacaaaat 9333664  T
Q  174 gtcaattatgttgtagtg 191  Q
     ||||| |||||||||||    
T  9333665 ctcaatcatgttgtagtg 9333682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 31068971 - 31069069
Alignment:
Q  78 gtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    |||||| |||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||| ||| |||| ||||||||||| ||||||    
T  31068971 gtaacacgggctttacctaacaattgttcaa-tgttactaaatttaattagtaacatttttcttgatttagttacaatttttaagtgttactaaatgtca 31069069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 38449930 - 38450089
Alignment:
Q  31 ttttgaatgttaaaaataatactataaaatgtaactaa----aactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||| ||||||| | ||||||| |||||||||||||||    | || |||||||||||| |||||||||||||||| | ||||||||||| | | |||      
T  38449930 tttttaatgttacatataataccataaaatgtaactaattaaagctgtttagtaacatgagctttacctaacaattatacaaatgttactgattttaa-- 38450027  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgtg 193  Q
         || |||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||    
T  38450028 -----catttttcttgatttggtaacaattttcatgtgttactagatgtcaattatgttgtagtgtg 38450089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 10869537 - 10869417
Alignment:
Q  69 aactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttac 168  Q
    ||||||||||||| | ||| | |||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||| ||| |||| || |||  |    
T  10869537 aactctttagtaaga-gggatatacctaacaattgttcaaatgttactaaatttaattagtaacaattttcatgatttagt-acaatttttaattgtatc 10869440  T
Q  169 tagatgtcaattatgttgtagtg 191  Q
    ||||| |||||||||||||||||    
T  10869439 tagatctcaattatgttgtagtg 10869417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 139
Target Start/End: Complemental strand, 42076171 - 42076078
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttc 139  Q
    ||||||||||||||| |  || || || ||||||||||||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||||    
T  42076171 ataatactataaaatattcctgaagctttttagtaacatggactttatctaacaattgttcaaatgttactaaatttaattagtaacaattttc 42076078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 37233156 - 37233061
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttctt 141  Q
    ||||||||||||||||| ||| ||||| |||||||||| || || ||||||||||||| |||||||||||||||| |||| ||||||  |||||||    
T  37233156 ataatactataaaatgttactgaaactttttagtaacacggactatacctaacaattgctcaaatgttactaaatttaattagtaacttttttctt 37233061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 18191886 - 18191970
Alignment:
Q  107 aaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||||||||||||| |||| ||||||| ||||||| ||||||| ||| ||||||| |||||||| || |||||||| ||||||||    
T  18191886 aaatgttactaaatttaattagtaacatttttcttaatttagttacaattttcaattgttactaaatctcaattattttgtagtg 18191970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 40401987 - 40402088
Alignment:
Q  48 aatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgattta 147  Q
    |||||||||||||||  || || || ||||| ||||  | |||||||||||||||||||||| || ||||||| |||| ||||||| ||||||| |||||    
T  40401987 aatactataaaatgttgctgaagctttttagcaacacagactttacctaacaattgttcaaacgtaactaaatttaattagtaacatttttctttattta 40402086  T
Q  148 gt 149  Q
    ||    
T  40402087 gt 40402088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 19615036 - 19615132
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacagttttcaagtgttacta 170  Q
    |||||||||||||||||||||||||| ||| ||||||||||| | || |||  ||||||| || || |||||||||| ||| |||| |||||||||||    
T  19615036 tttagtaacatgggctttacctaacatttg-tcaaatgttacaagatctaaatagtaacagttgtttttgatttagttacaattttgaagtgttacta 19615132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 16411652 - 16411573
Alignment:
Q  108 aatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgta 188  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||| | ||||||| |||||||| |  ||| ||||||||||    
T  16411652 aatgttactagatataatcagtaacatttttcgtgatttagtaata-ttttcaaatgttactaaagctcagttatgttgta 16411573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 42076092 - 42076045
Alignment:
Q  145 ttagtaacagttttcaagtgttactagatgtcaattatgttgtagtgt 192  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  42076092 ttagtaacaattttcaattgttactagatctcaattatgttgtagtgt 42076045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 15160483 - 15160366
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacagttttcaagtgttactaga 172  Q
    ||||||||||||||||||||||||| |||  ||||||||||| | || |||  ||||||| || || |||||||| | ||| |||| ||||||||||| |    
T  15160483 tttagtaacatgggctttacctaac-atttatcaaatgttacaagatttaaatagtaacatttgtttttgatttatttacaattttgaagtgttactaaa 15160385  T
Q  173 tgtcaattatgttgtagtg 191  Q
    | |||  ||||||||||||    
T  15160384 tctcatatatgttgtagtg 15160366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 11833242 - 11833354
Alignment:
Q  68 aaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgtta 167  Q
    |||||||||||||| |||| ||||||   |||||| ||  |||||| ||| ||||||| | ||||| ||||| ||||||||| ||| || |||| |||||    
T  11833242 aaactctttagtaaaatggcctttac---acaattattttaatgttgctagatataattaataacatttttcatgatttagttacatttgtcaaatgtta 11833338  T
Q  168 ctagatgtcaattatg 183  Q
    ||| || |||||||||    
T  11833339 ctaaatctcaattatg 11833354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 17535411 - 17535350
Alignment:
Q  130 aacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||| ||||||||||||||| ||| |||||||  |||||||||| |||||| ||||||||||    
T  17535411 aacatttttcttgatttagttacatttttcaaccgttactagatctcaattttgttgtagtg 17535350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 194
Target Start/End: Original strand, 30655180 - 30655300
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacagttttcaagtgttactaga 172  Q
    ||||||||||  |||||||||||||| || | |||||||||| | || |||  ||||||| || || |||||||||| ||| |||| ||||||||||| |    
T  30655180 tttagtaacaccggctttacctaacatttat-caaatgttacaagatctaaatagtaacatttgtttttgatttagttacaattttgaagtgttactaaa 30655278  T
Q  173 tgtcaattatgttgtagtgtga 194  Q
    | |||  |||||||||||||||    
T  30655279 tctcatatatgttgtagtgtga 30655300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 189
Target Start/End: Complemental strand, 14117356 - 14117275
Alignment:
Q  108 aatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtag 189  Q
    |||||||||||||  ||  || |||||||||||| ||||||||||| ||| ||| |||||||  || |||| ||||||||||    
T  14117356 aatgttactaaattaaaatagcaacaattttcttcatttagtaacattttccaaatgttacttaatttcaaatatgttgtag 14117275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 12004567 - 12004630
Alignment:
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    ||||||| ||||||||||||||| | | ||| ||| |||||||| || |||||||||||||||||    
T  12004567 agtaacatttttcttgatttagttagaattt-caattgttactaaatttcaattatgttgtagtg 12004630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 4881054 - 4881190
Alignment:
Q  55 taaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacag 154  Q
    ||||||| ||||||| | ||||||||||| || ||||||||||||||| | ||||| ||||||||| |||||||||||| |||||||||||||||||||     
T  4881054 taaaatgcaactaaagcactttagtaacacggactttacctaacaattatacaaatattactaaatttaatcagtaacatttttcttgatttagtaacaa 4881153  T
Q  155 ttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4881154 ttttcaagtgttactggatgtcaattatgttgtagtg 4881190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 47065991 - 47066141
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| |||||   ||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||||||| ||||     
T  47065991 cactttttgattgttacggatagtactataaaatgtaactaaaactctttggtaacacgggctttacctaacaattgttcaggtgttactaaatttaatt 47066090  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    | ||||| ||||||||||||||| ||| |||||||||||||||| ||||||    
T  47066091 actaacatttttcttgatttagttacaattttcaagtgttactaaatgtca 47066141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 168
Target Start/End: Complemental strand, 43600410 - 43600269
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| | ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| | || |||||| ||||     
T  43600410 cactttttgattgttacagatagtactataaaatgtaactaaaacactttagtaacacgggctttacctaacaattgttcaagttttgctaaatttaatt 43600311  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttac 168  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||    
T  43600310 agtaacatttttcttgatttagttacaattttcaagtgttac 43600269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 183
Target Start/End: Original strand, 4904125 - 4904253
Alignment:
Q  55 taaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacag 154  Q
    ||||||||||||||| | ||||||||||| | |||||||||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||||||     
T  4904125 taaaatgtaactaaagcactttagtaacaagtgctttacctaacaattgtacaaatgttactaaatttaatcagtaacatttttcatgatttagtaacaa 4904224  T
Q  155 ttttcaagtgttactagatgtcaattatg 183  Q
    |||| |||||||||| ||||| |||||||    
T  4904225 tttttaagtgttactggatgttaattatg 4904253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 1684909 - 1685059
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | ||||||||||||| |||||||||||||||||||||||| || ||||| ||||||||||||| | |||| | |||| ||||     
T  1684909 cactttttaattgttacagataatactataaattgtaactaaaactctttagtaacacggactttatctaacaattgttcgagtgttgcaaaatttaatt 1685008  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||| ||||||||||||||| ||| |||||||||||| ||| ||||||    
T  1685009 agtaacatttttcttgatttagttacaattttcaagtgttgctaaatgtca 1685059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 53300494 - 53300344
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| |||||   ||| ||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||| |  ||||||||||| ||||     
T  53300494 cactttttgattgttacggatagtacgataaaatgtaactaaaactctttggtaacacgggctttacctaacaattgtttaggtgttactaaatttaatt 53300395  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    | ||||| ||||||||||||| | ||| |||||||||||||||| ||||||    
T  53300394 actaacatttttcttgatttaattacaattttcaagtgttactaaatgtca 53300344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 46 - 191
Target Start/End: Original strand, 24558971 - 24559116
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatt 145  Q
    ||||||||||||||| | ||||||| ||||||||||||  | | |||||||||||| |||||||||||||||||| |||| ||||||| |||||||||||    
T  24558971 ataatactataaaatatcactaaaattctttagtaacacagccgttacctaacaatcgttcaaatgttactaaatttaattagtaacatttttcttgatt 24559070  T
Q  146 tagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||| ||| |||| || |||||||| || ||||||||||| |||||    
T  24559071 tagttacattttttaattgttactaaatctcaattatgttctagtg 24559116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 191
Target Start/End: Original strand, 37750966 - 37751110
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatt 145  Q
    |||||||||||||||||||||||| ||  |||||||||| ||||||| ||||||||||  ||||||||||| | | |||| |||||| ||||| ||||||    
T  37750966 ataatactataaaatgtaactaaagcttcttagtaacattggctttatctaacaattgcgcaaatgttactgattttaattagtaac-atttttttgatt 37751064  T
Q  146 tagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||| ||| ||||||  ||||||| |||||||||||||||||||||    
T  37751065 tagtgacaattttcatatgttactggatgtcaattatgttgtagtg 37751110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 177
Target Start/End: Complemental strand, 1152187 - 1152037
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | |||||| |||||| |||||||||||||||||||||||| || ||||| ||||||||||||  | |||| | |||| ||||     
T  1152187 cactttttaattgttacagataatattataaactgtaactaaaactctttagtaacacggactttatctaacaattgtttgagtgttgcaaaatttaatt 1152088  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||| ||||||| ||||||| ||| |||||||||||| ||| ||||||    
T  1152087 agtaacatttttcttaatttagttacaattttcaagtgttgctaaatgtca 1152037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 149
Target Start/End: Original strand, 21539248 - 21539350
Alignment:
Q  46 ataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatt 145  Q
    ||||||||| |||||||||||||| ||||||||||||| || ||| | |||||||||||| |||||||||||||| |||||||||||| ||| |||||||    
T  21539248 ataatactaaaaaatgtaactaaatctctttagtaacaaggactt-atctaacaattgtttaaatgttactaaatttaatcagtaacattttccttgatt 21539346  T
Q  146 tagt 149  Q
    ||||    
T  21539347 tagt 21539350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 27739732 - 27739807
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaatt 102  Q
    |||||||||| | ||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  27739732 cactttttgattcttacagataatactataaaatgtaactaaagctcttcagtaacatgggctttacctaacaatt 27739807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 191
Target Start/End: Original strand, 4923689 - 4923754
Alignment:
Q  126 cagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgtagtg 191  Q
    |||||||| ||||||||||||||||||| |||| |||||||||| ||||| |||||||||||||||    
T  4923689 cagtaacatttttcttgatttagtaacaatttttaagtgttactggatgttaattatgttgtagtg 4923754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 48464118 - 48464049
Alignment:
Q  92 acctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaa 161  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||| || ||||||||||| |||||||    
T  48464118 acctaacaattgttcaaatgttactaaatttaattagtaacatttttatttatttagtaacaattttcaa 48464049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 26075290 - 26075368
Alignment:
Q  110 tgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatgttgta 188  Q
    ||||||||||| || | |||||| ||||||||||| |||||||| ||||||| ||||| ||||| ||||||||||||||    
T  26075290 tgttactaaatttacttagtaaccattttcttgatctagtaacaattttcaattgttattagatttcaattatgttgta 26075368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 8573166 - 8573262
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacagttttcaagtgttacta 170  Q
    |||||||||| ||||||||||||||| ||| ||||||||||| | || |||  ||||||| || || |||||||||| ||| |||| |||||||||||    
T  8573166 tttagtaacacgggctttacctaacatttg-tcaaatgttacaagatctaaatagtaacagttgtttttgatttagttacaattttgaagtgttacta 8573262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 8575285 - 8575381
Alignment:
Q  74 tttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaatt-ttcttgatttagtaacagttttcaagtgttacta 170  Q
    |||||||||| ||||||||||||||| ||| ||||||||||| | || |||  ||||||| || || |||||||||| ||| |||| |||||||||||    
T  8575285 tttagtaacacgggctttacctaacatttg-tcaaatgttacaagatctaaatagtaacagttgtttttgatttagttacaattttgaagtgttacta 8575381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 21317581 - 21317488
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaat 120  Q
    ||||||||||||||||    |||||| ||||||||| | | || |  ||||||||||  | |||||||||||||||||| ||||||||||||||    
T  21317581 cactttttgaatgttattggtaatacaataaaatgttagtgaagcattttagtaacacagcctttacctaacaattgttgaaatgttactaaat 21317488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 158
Target Start/End: Original strand, 26075222 - 26075285
Alignment:
Q  95 taacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagtttt 158  Q
    |||||||||||| |||||||| |||| || | |||||||||||||||||| || ||||| ||||    
T  26075222 taacaattgttcgaatgttacaaaatttacttagtaacaattttcttgatctaataacaatttt 26075285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 32514588 - 32514521
Alignment:
Q  58 aatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataat 125  Q
    ||||| ||| |||||||||||| |||  ||||||| ||||||||| |||||||||||||  |||||||    
T  32514588 aatgttactgaaactctttagttacaatggctttatctaacaattcttcaaatgttactgtatataat 32514521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 183
Target Start/End: Complemental strand, 45641723 - 45641640
Alignment:
Q  98 caattgttcaaatgttactaaatataatcagtaacaattttcttgatttagtaacagttttcaagtgttactagatgtcaattatg 183  Q
    ||||||| |||||||||||| ||||||| ||||||| ||||| |||  | ||| || |||| || ||||||||||| |||||||||    
T  45641723 caattgtgcaaatgttactagatataattagtaacatttttcatga--tggtaccattttttaaatgttactagatctcaattatg 45641640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 18941656 - 18941733
Alignment:
Q  68 aaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatt 145  Q
    |||| |||| |||||| | ||||||| |||||||||||||||||||| |  ||||||| || |||| ||||| |||||    
T  18941656 aaacactttggtaacaagagctttacttaacaattgttcaaatgttattggatataattagcaacatttttcgtgatt 18941733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 704 - 854
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| | |||| ||||     
T  704 cactttttaattgttatagataatactataaaatgtaactaaaactctttagtaacatggactttatctaacaattgttcgagtgttgcaaaatttaatt 803  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||| ||||||    
T  804 agtaacaattttcttgatttagttacaattttcaagtgttgctaaatgtca 854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 177
Target Start/End: Original strand, 40655 - 40805
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||| | ||||| | ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||| | |||| ||||     
T  40655 cactttttaattgttacagataatactataaaatgtaactaaaactctttagtaacatggactttatctaacaattgttcgagtgttgcaaaatttaatt 40754  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttactagatgtca 177  Q
    ||||||||||||||||||||||| ||| ||||||||| || ||| ||||||    
T  40755 agtaacaattttcttgatttagttacaattttcaagtattgctaaatgtca 40805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 6842 - 6699
Alignment:
Q  27 cactttttgaatgttaaaaataatactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatc 126  Q
    |||||||||| ||||| | ||| ||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||| |||| |||||| ||||     
T  6842 cactttttgattgttacagatagtactataaaatgtaactaaaacattttagtaacaccggctttacctaacaattgttcaagtgttgctaaatttaatt 6743  T
Q  127 agtaacaattttcttgatttagtaacagttttcaagtgttacta 170  Q
    ||||||| ||||||||||||||| ||| |||| |||||||||||    
T  6742 agtaacatttttcttgatttagttacaatttttaagtgttacta 6699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 184
Target Start/End: Original strand, 446263 - 446397
Alignment:
Q  50 tactataaaatgtaactaaaactctttagtaacatgggctttacctaacaattgttcaaatgttactaaatataatcagtaacaattttcttgatttagt 149  Q
    ||||||||| ||| |||||| ||||||||||| |||| |||| ||||||||||||||||||||||| |||| ||||  ||||||||||   |||||||||    
T  446263 tactataaagtgttactaaagctctttagtaatatggacttttcctaacaattgttcaaatgttaccaaatttaattggtaacaatttgtatgatttagt 446362  T
Q  150 aacagttttcaagtgttactagatgtcaattatgt 184  Q
     ||| | ||| | ||||||||||| ||||||||||    
T  446363 tacaatcttcgattgttactagatctcaattatgt 446397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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