View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3837_high_6 (Length: 262)
Name: NF3837_high_6
Description: NF3837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3837_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 12 - 243
Target Start/End: Complemental strand, 30767687 - 30767456
Alignment:
| Q |
12 |
catcatcacaggtctcaacaagttcatcaagcttcaatctttggaagcaggtttgtttctgatggattagcaggtttctgcattcctgatacagttcaag |
111 |
Q |
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| T |
30767687 |
catcatcacaggtctcaacaagttcatcaagcttcaatctttggaagcaggtttgtttctgatggattagcaggtttctgcattcctgatacagttcaag |
30767588 |
T |
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| Q |
112 |
gtggagaagagggtcatagagtttcttctaatagaccttcttcttctcctaatcacaactgagcaaagttttctatcaggtattattccactgataatat |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30767587 |
gtggagaagagggtcatagagtttcttctaatagaccttcttcttctcctaatcacaactgagcaaagttttctatcaggtattattccactgataatat |
30767488 |
T |
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| Q |
212 |
tagcataaagttgtaatcttttatatatcttt |
243 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
30767487 |
tagcataaagttgtaatcttttatatatcttt |
30767456 |
T |
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