View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3838_low_3 (Length: 484)

Name: NF3838_low_3
Description: NF3838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3838_low_3
NF3838_low_3
[»] chr7 (53 HSPs)
chr7 (22-472)||(14627299-14627749)
chr7 (238-472)||(14652716-14652950)
chr7 (234-472)||(14661151-14661389)
chr7 (243-472)||(14750119-14750348)
chr7 (234-472)||(14758032-14758270)
chr7 (282-472)||(14765240-14765430)
chr7 (17-102)||(26492585-26492670)
chr7 (19-99)||(45198808-45198888)
chr7 (17-103)||(20116801-20116887)
chr7 (19-100)||(1485030-1485111)
chr7 (19-99)||(34773933-34774013)
chr7 (30-102)||(42066834-42066906)
chr7 (20-99)||(32684891-32684970)
chr7 (19-102)||(46822237-46822320)
chr7 (20-102)||(23425145-23425227)
chr7 (17-102)||(21266610-21266697)
chr7 (19-98)||(433467-433546)
chr7 (17-100)||(2843015-2843098)
chr7 (19-102)||(23085743-23085826)
chr7 (20-99)||(35495950-35496029)
chr7 (19-89)||(7640560-7640630)
chr7 (19-103)||(1448603-1448687)
chr7 (19-102)||(26583932-26584015)
chr7 (22-97)||(42311503-42311578)
chr7 (22-102)||(22927642-22927722)
chr7 (17-99)||(6002247-6002329)
chr7 (17-102)||(6559097-6559182)
chr7 (17-97)||(35667009-35667089)
chr7 (19-102)||(23786797-23786880)
chr7 (17-102)||(31235556-31235641)
chr7 (17-102)||(32521701-32521786)
chr7 (17-90)||(46339274-46339347)
chr7 (62-103)||(12502023-12502064)
chr7 (62-103)||(12527657-12527698)
chr7 (19-99)||(35261519-35261599)
chr7 (19-102)||(17611613-17611696)
chr7 (35-102)||(46818176-46818243)
chr7 (30-99)||(19560229-19560298)
chr7 (19-99)||(20083560-20083640)
chr7 (30-97)||(37849072-37849139)
chr7 (19-97)||(13592287-13592364)
chr7 (66-103)||(24770519-24770556)
chr7 (65-102)||(28044545-28044582)
chr7 (65-102)||(39328583-39328620)
chr7 (19-60)||(48208156-48208197)
chr7 (65-102)||(48316608-48316645)
chr7 (68-99)||(3267009-3267040)
chr7 (65-99)||(12141099-12141133)
chr7 (68-102)||(24610048-24610082)
chr7 (68-102)||(41553225-41553259)
chr7 (65-99)||(48061687-48061721)
chr7 (30-99)||(43369549-43369618)
chr7 (17-102)||(35664925-35665012)
[»] chr5 (54 HSPs)
chr5 (113-472)||(17701835-17702194)
chr5 (238-472)||(17690802-17691036)
chr5 (234-472)||(17683872-17684110)
chr5 (234-472)||(17570265-17570503)
chr5 (282-472)||(17563169-17563359)
chr5 (20-102)||(21060055-21060137)
chr5 (20-102)||(27752150-27752232)
chr5 (19-102)||(7242008-7242091)
chr5 (19-102)||(7247183-7247266)
chr5 (19-102)||(34881941-34882024)
chr5 (19-99)||(781612-781692)
chr5 (19-99)||(3271177-3271257)
chr5 (19-102)||(10649866-10649949)
chr5 (19-102)||(27266631-27266714)
chr5 (17-102)||(7886712-7886796)
chr5 (30-102)||(19280709-19280781)
chr5 (31-98)||(18677242-18677309)
chr5 (19-102)||(30371845-30371928)
chr5 (30-102)||(7150107-7150179)
chr5 (19-99)||(41184216-41184295)
chr5 (19-102)||(16981516-16981599)
chr5 (19-102)||(30299068-30299151)
chr5 (22-97)||(35475115-35475190)
chr5 (19-102)||(43148951-43149034)
chr5 (22-96)||(8771959-8772033)
chr5 (20-85)||(42580113-42580178)
chr5 (30-99)||(43008090-43008159)
chr5 (19-102)||(30298433-30298516)
chr5 (17-102)||(4954214-4954299)
chr5 (17-97)||(20257473-20257553)
chr5 (30-99)||(19259587-19259656)
chr5 (19-96)||(15571131-15571208)
chr5 (22-101)||(2057607-2057691)
chr5 (22-102)||(7612831-7612910)
chr5 (19-102)||(11768223-11768307)
chr5 (17-102)||(38007568-38007656)
chr5 (55-103)||(14726249-14726297)
chr5 (19-99)||(36057103-36057183)
chr5 (22-99)||(37483274-37483347)
chr5 (68-103)||(13422197-13422232)
chr5 (68-102)||(8088002-8088036)
chr5 (65-102)||(6011927-6011964)
chr5 (65-102)||(9113514-9113551)
chr5 (67-99)||(35851061-35851093)
chr5 (62-97)||(43261649-43261684)
chr5 (68-102)||(177752-177786)
chr5 (68-102)||(8984778-8984812)
chr5 (68-102)||(11073777-11073811)
chr5 (68-102)||(13007494-13007528)
chr5 (65-99)||(24229576-24229610)
chr5 (65-102)||(26825692-26825729)
chr5 (65-97)||(8096293-8096325)
chr5 (22-86)||(22978712-22978776)
chr5 (46-102)||(28235840-28235896)
[»] chr1 (69 HSPs)
chr1 (269-469)||(15196324-15196524)
chr1 (269-469)||(15216742-15216942)
chr1 (281-472)||(15195685-15195876)
chr1 (281-472)||(15216103-15216294)
chr1 (19-102)||(20266528-20266611)
chr1 (19-102)||(9686977-9687060)
chr1 (19-102)||(25406056-25406139)
chr1 (19-102)||(30879301-30879384)
chr1 (17-102)||(50165871-50165956)
chr1 (22-102)||(51868417-51868497)
chr1 (19-102)||(11454163-11454246)
chr1 (19-99)||(7342948-7343028)
chr1 (19-102)||(9172716-9172799)
chr1 (19-102)||(9180698-9180781)
chr1 (19-102)||(11709479-11709562)
chr1 (19-97)||(45805606-45805684)
chr1 (19-100)||(19715669-19715750)
chr1 (21-102)||(27914879-27914960)
chr1 (17-102)||(41081476-41081561)
chr1 (19-99)||(32676910-32676990)
chr1 (19-103)||(34519354-34519438)
chr1 (22-102)||(48217666-48217746)
chr1 (19-102)||(5324331-5324414)
chr1 (19-102)||(19723539-19723622)
chr1 (19-102)||(31837060-31837143)
chr1 (19-102)||(33291190-33291273)
chr1 (19-102)||(50148596-50148679)
chr1 (19-102)||(51872089-51872172)
chr1 (22-99)||(35584398-35584474)
chr1 (19-98)||(28035363-28035441)
chr1 (21-102)||(30818136-30818217)
chr1 (30-102)||(3871644-3871716)
chr1 (17-97)||(31130370-31130450)
chr1 (19-99)||(39987644-39987724)
chr1 (19-102)||(45425839-45425921)
chr1 (19-102)||(50271912-50271995)
chr1 (17-102)||(38520307-38520392)
chr1 (19-91)||(40646901-40646971)
chr1 (19-99)||(44637643-44637723)
chr1 (19-102)||(9919614-9919695)
chr1 (39-102)||(14545721-14545784)
chr1 (19-76)||(5701485-5701542)
chr1 (17-97)||(24583165-24583247)
chr1 (17-102)||(34878067-34878155)
chr1 (21-102)||(33816940-33817021)
chr1 (21-102)||(33876410-33876491)
chr1 (19-71)||(40880816-40880868)
chr1 (67-102)||(30712081-30712116)
chr1 (19-102)||(24583363-24583448)
chr1 (19-102)||(47133120-47133205)
chr1 (65-102)||(5984082-5984119)
chr1 (65-102)||(49504384-49504421)
chr1 (65-97)||(18569088-18569120)
chr1 (23-99)||(18649756-18649832)
chr1 (55-99)||(21687634-21687678)
chr1 (19-54)||(7998015-7998050)
chr1 (65-99)||(11462274-11462308)
chr1 (65-99)||(14872905-14872939)
chr1 (53-99)||(19596252-19596298)
chr1 (68-102)||(27456758-27456792)
chr1 (68-102)||(32678933-32678967)
chr1 (65-99)||(36894200-36894234)
chr1 (68-102)||(44915908-44915942)
chr1 (68-102)||(50377592-50377626)
chr1 (68-101)||(5685686-5685719)
chr1 (65-102)||(32395263-32395300)
chr1 (70-102)||(15431456-15431488)
chr1 (68-100)||(26535605-26535637)
chr1 (19-102)||(27872963-27873047)
[»] scaffold1961 (1 HSPs)
scaffold1961 (269-472)||(22-225)
[»] chr4 (57 HSPs)
chr4 (20-102)||(9284146-9284228)
chr4 (19-102)||(9528649-9528732)
chr4 (19-102)||(20569491-20569574)
chr4 (19-102)||(25274117-25274200)
chr4 (19-102)||(38706482-38706565)
chr4 (19-99)||(53616425-53616505)
chr4 (19-102)||(2115360-2115443)
chr4 (19-102)||(4644092-4644175)
chr4 (19-102)||(34024210-34024293)
chr4 (20-97)||(45227818-45227895)
chr4 (17-102)||(51318217-51318302)
chr4 (30-102)||(10359321-10359393)
chr4 (21-102)||(10389526-10389607)
chr4 (19-99)||(1532142-1532222)
chr4 (19-99)||(9645299-9645379)
chr4 (20-96)||(50766290-50766366)
chr4 (19-102)||(43444626-43444709)
chr4 (19-102)||(44947646-44947729)
chr4 (17-102)||(12265694-12265778)
chr4 (17-99)||(47417894-47417972)
chr4 (21-102)||(49680766-49680847)
chr4 (19-99)||(56199330-56199410)
chr4 (19-102)||(3335936-3336019)
chr4 (19-102)||(37188371-37188450)
chr4 (17-97)||(6973042-6973122)
chr4 (19-96)||(46990909-46990986)
chr4 (19-99)||(31381491-31381570)
chr4 (21-99)||(43153793-43153870)
chr4 (17-98)||(868395-868476)
chr4 (19-99)||(8670719-8670796)
chr4 (19-91)||(35261426-35261497)
chr4 (30-100)||(52097690-52097760)
chr4 (65-102)||(13634398-13634435)
chr4 (19-72)||(21090376-21090429)
chr4 (19-91)||(7273605-7273677)
chr4 (19-91)||(29966560-29966632)
chr4 (20-102)||(53444353-53444439)
chr4 (68-102)||(6154998-6155032)
chr4 (19-102)||(47320202-47320287)
chr4 (65-102)||(4142553-4142590)
chr4 (65-102)||(19853301-19853338)
chr4 (65-102)||(21686031-21686068)
chr4 (30-86)||(18138705-18138761)
chr4 (30-86)||(49125918-49125974)
chr4 (21-102)||(49410459-49410529)
chr4 (65-99)||(2521062-2521096)
chr4 (68-102)||(9048960-9048994)
chr4 (17-97)||(24736155-24736232)
chr4 (65-99)||(26633463-26633497)
chr4 (68-102)||(36162008-36162042)
chr4 (65-99)||(56040438-56040472)
chr4 (65-102)||(17949112-17949149)
chr4 (65-102)||(17952964-17953001)
chr4 (65-102)||(32766797-32766834)
chr4 (65-102)||(53811301-53811338)
chr4 (70-102)||(43448268-43448300)
chr4 (65-97)||(43510479-43510511)
[»] chr2 (65 HSPs)
chr2 (17-102)||(36234222-36234307)
chr2 (19-102)||(9986114-9986197)
chr2 (19-102)||(27248923-27249006)
chr2 (19-102)||(41431254-41431337)
chr2 (20-102)||(4193064-4193146)
chr2 (17-102)||(34600438-34600523)
chr2 (19-99)||(4228349-4228429)
chr2 (19-102)||(8806092-8806175)
chr2 (19-102)||(20046854-20046937)
chr2 (19-102)||(31580427-31580510)
chr2 (17-102)||(2808245-2808330)
chr2 (17-102)||(22421952-22422037)
chr2 (18-102)||(3725405-3725489)
chr2 (19-99)||(21570183-21570263)
chr2 (19-103)||(40625828-40625912)
chr2 (19-102)||(83953-84036)
chr2 (19-102)||(25087262-25087344)
chr2 (19-102)||(33228760-33228843)
chr2 (19-97)||(30420895-30420973)
chr2 (22-102)||(8971400-8971480)
chr2 (31-102)||(7015483-7015554)
chr2 (19-102)||(21132058-21132141)
chr2 (19-102)||(38575258-38575340)
chr2 (20-97)||(27949653-27949730)
chr2 (22-102)||(9374335-9374415)
chr2 (22-96)||(7558681-7558755)
chr2 (19-99)||(3268610-3268690)
chr2 (19-102)||(6174042-6174124)
chr2 (30-97)||(45128429-45128496)
chr2 (55-103)||(32913490-32913538)
chr2 (36-102)||(26025268-26025334)
chr2 (55-102)||(1415820-1415867)
chr2 (19-102)||(37613898-37613981)
chr2 (26-99)||(459051-459124)
chr2 (19-100)||(12236832-12236913)
chr2 (57-102)||(32678895-32678940)
chr2 (36-96)||(8308338-8308398)
chr2 (19-99)||(30923250-30923330)
chr2 (55-102)||(4041384-4041431)
chr2 (55-102)||(33923968-33924015)
chr2 (19-62)||(40659744-40659787)
chr2 (65-103)||(7646751-7646789)
chr2 (68-102)||(32448407-32448441)
chr2 (61-99)||(33759977-33760015)
chr2 (19-102)||(37994508-37994593)
chr2 (65-102)||(5427659-5427696)
chr2 (23-96)||(13718948-13719021)
chr2 (19-102)||(4100559-4100640)
chr2 (23-99)||(24461671-24461746)
chr2 (65-101)||(31788729-31788765)
chr2 (22-102)||(36324083-36324163)
chr2 (67-103)||(36942911-36942947)
chr2 (55-102)||(12677241-12677288)
chr2 (67-102)||(18763743-18763778)
chr2 (68-102)||(12553959-12553993)
chr2 (68-102)||(14955816-14955850)
chr2 (65-99)||(31193129-31193163)
chr2 (68-102)||(37876396-37876430)
chr2 (65-99)||(38445439-38445473)
chr2 (68-102)||(41328015-41328049)
chr2 (65-102)||(1421948-1421984)
chr2 (65-102)||(4779026-4779063)
chr2 (19-97)||(17248943-17249023)
chr2 (70-102)||(27097206-27097238)
chr2 (19-91)||(41712572-41712644)
[»] chr8 (48 HSPs)
chr8 (19-102)||(14906695-14906778)
chr8 (19-102)||(4809193-4809276)
chr8 (19-102)||(29777448-29777531)
chr8 (17-102)||(9072945-9073030)
chr8 (17-102)||(9498371-9498456)
chr8 (19-102)||(44099708-44099791)
chr8 (17-102)||(11725907-11725993)
chr8 (19-102)||(33896315-33896398)
chr8 (17-98)||(19876425-19876506)
chr8 (19-99)||(23851269-23851349)
chr8 (19-99)||(43889899-43889979)
chr8 (17-99)||(28240068-28240150)
chr8 (19-99)||(9619132-9619212)
chr8 (23-91)||(11267241-11267309)
chr8 (22-102)||(43135356-43135431)
chr8 (17-99)||(44578257-44578339)
chr8 (19-103)||(27746886-27746970)
chr8 (22-90)||(37565663-37565731)
chr8 (19-99)||(39152917-39152997)
chr8 (19-102)||(34612033-34612116)
chr8 (19-101)||(17949747-17949829)
chr8 (20-102)||(32724253-32724335)
chr8 (22-83)||(2656102-2656163)
chr8 (19-88)||(43192133-43192202)
chr8 (19-99)||(33342663-33342742)
chr8 (20-78)||(11464401-11464459)
chr8 (19-99)||(17427000-17427080)
chr8 (19-102)||(30568108-30568194)
chr8 (19-102)||(1236485-1236570)
chr8 (17-102)||(21238002-21238089)
chr8 (48-103)||(35580678-35580733)
chr8 (19-102)||(24099044-24099129)
chr8 (65-102)||(10377939-10377976)
chr8 (22-99)||(12654295-12654372)
chr8 (269-354)||(24395647-24395732)
chr8 (19-99)||(33299083-33299163)
chr8 (67-102)||(7883028-7883063)
chr8 (68-102)||(3673709-3673743)
chr8 (19-85)||(16794520-16794586)
chr8 (68-102)||(29617062-29617096)
chr8 (68-102)||(40618860-40618894)
chr8 (19-102)||(3240596-3240683)
chr8 (65-102)||(23230908-23230945)
chr8 (65-98)||(40211091-40211124)
chr8 (65-98)||(45445602-45445635)
chr8 (30-102)||(15596940-15597012)
chr8 (65-97)||(33214463-33214495)
chr8 (19-99)||(34680663-34680743)
[»] chr6 (39 HSPs)
chr6 (19-102)||(8497190-8497273)
chr6 (22-102)||(8027890-8027970)
chr6 (19-102)||(4984339-4984422)
chr6 (19-102)||(17237058-17237141)
chr6 (19-102)||(25064458-25064541)
chr6 (20-102)||(23947089-23947171)
chr6 (19-102)||(12653166-12653249)
chr6 (19-102)||(16419380-16419463)
chr6 (19-97)||(7880879-7880957)
chr6 (17-102)||(28634885-28634970)
chr6 (19-98)||(4468774-4468853)
chr6 (19-97)||(7875821-7875899)
chr6 (19-96)||(17334975-17335052)
chr6 (19-99)||(4088682-4088762)
chr6 (19-99)||(12168902-12168980)
chr6 (24-97)||(34489428-34489501)
chr6 (19-99)||(12059548-12059628)
chr6 (19-102)||(3173984-3174067)
chr6 (36-103)||(7028094-7028161)
chr6 (19-97)||(33740355-33740433)
chr6 (19-99)||(35001812-35001892)
chr6 (22-85)||(8196196-8196259)
chr6 (19-79)||(16892611-16892671)
chr6 (23-97)||(15612366-15612440)
chr6 (65-102)||(606468-606505)
chr6 (38-97)||(20619662-20619721)
chr6 (22-99)||(10228904-10228983)
chr6 (68-102)||(29319666-29319700)
chr6 (65-102)||(7514992-7515029)
chr6 (65-102)||(32327009-32327046)
chr6 (22-87)||(33110836-33110901)
chr6 (65-100)||(14174862-14174897)
chr6 (65-100)||(14179398-14179433)
chr6 (65-99)||(1450528-1450562)
chr6 (65-99)||(12170732-12170766)
chr6 (68-102)||(31851670-31851704)
chr6 (65-102)||(3913363-3913400)
chr6 (65-102)||(9341440-9341477)
chr6 (68-101)||(33052958-33052991)
[»] chr3 (53 HSPs)
chr3 (21-102)||(25162657-25162738)
chr3 (19-99)||(32607688-32607768)
chr3 (19-102)||(36906341-36906424)
chr3 (20-102)||(4178785-4178867)
chr3 (19-99)||(50611193-50611273)
chr3 (19-102)||(25631298-25631381)
chr3 (19-102)||(35498972-35499055)
chr3 (19-102)||(51202036-51202119)
chr3 (20-102)||(12116318-12116400)
chr3 (19-99)||(3848694-3848774)
chr3 (19-99)||(44907174-44907254)
chr3 (19-102)||(2342667-2342750)
chr3 (19-97)||(38440368-38440446)
chr3 (21-102)||(17238026-17238107)
chr3 (22-99)||(29503683-29503760)
chr3 (20-99)||(46934859-46934938)
chr3 (19-85)||(30648508-30648574)
chr3 (22-102)||(38854811-38854888)
chr3 (21-99)||(37169450-37169528)
chr3 (17-102)||(6823396-6823481)
chr3 (17-102)||(22803247-22803332)
chr3 (19-94)||(49552004-49552079)
chr3 (26-99)||(46178794-46178867)
chr3 (17-97)||(39917176-39917255)
chr3 (19-99)||(35175617-35175699)
chr3 (19-102)||(628713-628798)
chr3 (65-102)||(21533598-21533635)
chr3 (19-84)||(21916692-21916757)
chr3 (19-102)||(46979772-46979855)
chr3 (55-102)||(47041837-47041884)
chr3 (68-102)||(20464754-20464788)
chr3 (19-102)||(53807648-53807733)
chr3 (65-102)||(6954485-6954522)
chr3 (65-102)||(9797323-9797360)
chr3 (65-102)||(43017150-43017187)
chr3 (65-98)||(48650527-48650560)
chr3 (65-102)||(52922906-52922943)
chr3 (28-102)||(20911384-20911455)
chr3 (68-102)||(3085080-3085114)
chr3 (68-102)||(21313301-21313335)
chr3 (17-99)||(24396291-24396373)
chr3 (55-101)||(33580132-33580178)
chr3 (65-99)||(40487587-40487621)
chr3 (65-99)||(40556964-40556998)
chr3 (65-102)||(10108498-10108535)
chr3 (65-102)||(10229738-10229775)
chr3 (65-102)||(10233332-10233369)
chr3 (53-102)||(20608687-20608736)
chr3 (30-83)||(31794298-31794351)
chr3 (65-102)||(36910555-36910592)
chr3 (65-102)||(38546061-38546098)
chr3 (67-99)||(25850065-25850097)
chr3 (65-97)||(45568239-45568271)
[»] scaffold0146 (1 HSPs)
scaffold0146 (21-102)||(16092-16173)
[»] scaffold0014 (1 HSPs)
scaffold0014 (17-99)||(201148-201230)
[»] scaffold0022 (1 HSPs)
scaffold0022 (19-99)||(83212-83291)
[»] scaffold0003 (1 HSPs)
scaffold0003 (19-99)||(361574-361654)
[»] scaffold0311 (1 HSPs)
scaffold0311 (17-95)||(8911-8989)
[»] scaffold0443 (1 HSPs)
scaffold0443 (19-91)||(4427-4499)
[»] scaffold0113 (1 HSPs)
scaffold0113 (21-100)||(36464-36543)
[»] scaffold0039 (1 HSPs)
scaffold0039 (20-103)||(53189-53272)
[»] scaffold0495 (1 HSPs)
scaffold0495 (22-99)||(5623-5702)
[»] scaffold0445 (1 HSPs)
scaffold0445 (67-102)||(1637-1672)
[»] scaffold0884 (1 HSPs)
scaffold0884 (65-99)||(1765-1799)


Alignment Details
Target: chr7 (Bit Score: 371; Significance: 0; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 22 - 472
Target Start/End: Complemental strand, 14627749 - 14627299
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaacnnnnnnn-tagcttaaag 120  Q
    ||||||| |||||||||| ||||||||  ||| |||||| ||||||||||||||||||||||||||||||||||||||||||        ||||||||||    
T  14627749 attcatcctttacgtttt-agcggtgtcaaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaacaaaaaaaatagcttaaag 14627651  T
Q  121 atatggtaagaagtatgactgctctttctaacttactagaatcacactagggagaagcacttaaaattgcaacatgtatccttaataggattccaactaa 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14627650 atatggtaagaagtatgactgctctttctaacttactagaatcacactagggagaagcacttaaaattgcaacatgtatccttaataggattccaactaa 14627551  T
Q  221 agcaactacacaaactcaatatatttatgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaaaacttgctcataaacagaag 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14627550 agcaactacacaaactcaatatatttatgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaatacttgctcataaacagaag 14627451  T
Q  321 gacctaaatcaattagcatctttgtaacatttctaatcagttctctattaacatcttccccggcacgctccttaaatataaactccaaaagcgtattcga 420  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  14627450 gacctaaatcaattagcatctttgtaacatttctaatcagttctctgttaacatcttccccggcacgctctttaaatacaaactccaaaagcgtattcga 14627351  T
Q  421 cagtcgagtccttatctggtttgaataaataacattttctctccacaggttc 472  Q
    || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14627350 caatcgattccttatctggtttgaataaataacattttctctccacaggttc 14627299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 238 - 472
Target Start/End: Complemental strand, 14652950 - 14652716
Alignment:
Q  238 aatatatttatgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaattagc 337  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||    
T  14652950 aatatatttctgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaatacttgctcataaacagaaggacctaaatccatcagc 14652851  T
Q  338 atctttgtaacatttctaatcagttctctattaacatcttccccggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtccttatct 437  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  14652850 atctttgtaacatttctaatcagttctctgttaacatcttccccggcacgctccttaaatacaaactccaaaagcgtattcgacaatcgagtccttatct 14652751  T
Q  438 ggtttgaataaataacattttctctccacaggttc 472  Q
    |||||||||||||||||||||||||||||||||||    
T  14652750 ggtttgaataaataacattttctctccacaggttc 14652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 234 - 472
Target Start/End: Complemental strand, 14661389 - 14661151
Alignment:
Q  234 actcaatatatttatgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaat 333  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  14661389 actcaatatatttctcagattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaattcttgctcataaacagaaggacctaaatcaat 14661290  T
Q  334 tagcatctttgtaacatttctaatcagttctctattaacatcttccccggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtcctt 433  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  14661289 tagcatctttgtaacatttctaatcagttctctgttaacatcttccccggcacgctccttgaatacaaactccaaaagcgtattcgacagtcgagtcctt 14661190  T
Q  434 atctggtttgaataaataacattttctctccacaggttc 472  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14661189 atctggtttgaataaataacattttctctccacaggttc 14661151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 243 - 472
Target Start/End: Original strand, 14750119 - 14750348
Alignment:
Q  243 atttatgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaattagcatctt 342  Q
    |||| |||||||||||| | ||  | |||||| ||||||| | |||||||||||||||  ||| |||||||||| | ||||||||||| |||||||||||    
T  14750119 atttctgggattcagccctatagaactcagctgaaacttgtaaaaaaggagtctcaaattcttcctcataaacaaagggacctaaatccattagcatctt 14750218  T
Q  343 tgtaacatttctaatcagttctctattaacatcttccccggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtccttatctggttt 442  Q
    ||  | |||||||||| |||||||||||||||||||| | ||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  14750219 tgatagatttctaatcggttctctattaacatcttccgcagcatgctccttgaatacaaactccaaaagcgtattcgacagtcgagtccttatctggttt 14750318  T
Q  443 gaataaataacattttctctccacaggttc 472  Q
    |||||||||||||| |||||||||||||||    
T  14750319 gaataaataacattctctctccacaggttc 14750348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 234 - 472
Target Start/End: Original strand, 14758032 - 14758270
Alignment:
Q  234 actcaatatatttatgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaat 333  Q
    |||| ||| |||| || ||||||||| ||||  | |||||| ||||||| ||||| | |||||| ||  ||||||| |||||||||| ||||||||| ||    
T  14758032 actcgataaatttctgagattcagccctgtagaactcagctgaaacttgtagaaacgaagtctcgaattcttgctcttaaacagaagaacctaaatccat 14758131  T
Q  334 tagcatctttgtaacatttctaatcagttctctattaacatcttccccggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtcctt 433  Q
    |||||||||||||| |||| ||||||||||| |||||||||||||||| ||||| |||||  |||  || ||||||||| |||||||||||||||||||     
T  14758132 tagcatctttgtaatatttttaatcagttctatattaacatcttccccagcacgttccttgcatactaattccaaaagcatattcgacagtcgagtcctg 14758231  T
Q  434 atctggtttgaataaataacattttctctccacaggttc 472  Q
    ||||| ||||| ||||||||||| ||| |||||||||||    
T  14758232 atctgttttgagtaaataacattctctgtccacaggttc 14758270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 282 - 472
Target Start/End: Original strand, 14765240 - 14765430
Alignment:
Q  282 gcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctattaacatcttcccc 381  Q
    ||||||||||| |||||||  ||| ||||||||| |||||||||  |||||||||||||||||| | | ||||||||||| ||||||||||| |||| ||    
T  14765240 gcagaaaaggattctcaaattcttcctcataaacggaaggacctgtatcaattagcatctttgttatacttctaatcagtcctctattaacaacttcgcc 14765339  T
Q  382 ggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacaggttc 472  Q
    |||||||||  |   ||  || ||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  14765340 ggcacgctcactgtgtactaattccaaaagcatattcaacagtcgagtccttatctggtttgaatgaagaacattttctctccacaggttc 14765430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 26492585 - 26492670
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  26492585 cacagattcatcttttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 26492670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 45198888 - 45198808
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  45198888 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 45198808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 20116801 - 20116887
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    |||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  20116801 cacagattcatcatttacgtttttagcggtgtggaatgatgtaatctctcgatttgaatgaatgaatatcattttggttttgtcaac 20116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 1485111 - 1485030
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtc 100  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||    
T  1485111 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtc 1485030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 34773933 - 34774013
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||| ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  34773933 cagatttatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 34774013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 42066906 - 42066834
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  42066906 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 42066834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 32684891 - 32684970
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||||| |||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  32684891 agattcatcctttacgtttttagcggtgttgaatgatgtagtctctcgatttgaatgaatgaatatcattttgtttttgt 32684970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 46822237 - 46822320
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  46822237 cagattcatcctttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaattaatatcattttgtttttgtcaa 46822320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 23425227 - 23425145
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||| ||||||||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  23425227 agattcatcatttacgtttttagcgatgttgaataatgtaatctcttaatttgaatgaatgaatatcattttgtttttgtcaa 23425145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 21266610 - 21266697
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactct--cgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||| ||||||||||||||||||||||||  ||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  21266610 cacagattcatcatttacgtttttagcggtgttgaatggtgtaatctctctcgatttgaatgaatgaatatcattttgtttttgtcaa 21266697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 433546 - 433467
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttg 98  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| ||||||    
T  433546 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatctttttatttttg 433467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 2843098 - 2843015
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtc 100  Q
    |||| ||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||| ||||||||    
T  2843098 cacatattcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatcattttatttttgtc 2843015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 23085743 - 23085826
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| ||||| ||||||||||    
T  23085743 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatcaatataattttatttttgtcaa 23085826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 35496029 - 35495950
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||  ||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||    
T  35496029 agattcatcccttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgattgaatatcattttgtttttgt 35495950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 7640630 - 7640560
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcatt 89  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  7640630 cagattcatcatttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcatt 7640560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 1448687 - 1448603
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    |||||||||| |||| ||||| ||||||||||||| || |||  |||||||||||||||||||||||||||||||||||||||||    
T  1448687 cagattcatcctttaggttttcagcggtgttgaatgatataatatctcgatttgaatgaatgaatatcattttgtttttgtcaac 1448603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 26583932 - 26584015
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||| || |||||||| |||||| ||| |||||||||||||||||||||||||| ||||||||||    
T  26583932 cagattcatcctttacgtttttaacgatgttgaatgatgtaatctcacgatttgaatgaatgaatatcattttatttttgtcaa 26584015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 42311503 - 42311578
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    ||||||| ||||||||| |||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  42311503 attcatcctttacgtttctagcagtgttgaataatgtaatctctcgatttgaataaatgaatatcattttgttttt 42311578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 22927722 - 22927642
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||| ||||| |||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  22927722 attcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaattaatgaatatcattttatttttttcaa 22927642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 6002247 - 6002329
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||| ||| |||||||||||| || ||||||||||||||| || ||||||||||||||||||||| | |||||||||||    
T  6002247 cacagatttatcatttacgtttttaacgatgttgaataatgtaacctatcgatttgaatgaatgaatattagtttgtttttgt 6002329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 6559097 - 6559182
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||| ||||||| |||||||||||||  ||||||||| || ||| ||||| |||| ||||||||||||||||||||||||||||||    
T  6559097 cacatattcatcatttacgtttttagtagtgttgaatgatataatctctcaatttaaatgaatgaatatcattttgtttttgtcaa 6559182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 35667089 - 35667009
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||| ||||||| ||||||||||||||||||||||||  | ||  |||| |||||||||||||||||||||||||||||||    
T  35667089 cacaaattcatcatttacgtttttagcggtgttgaatggtatattctcttgatttgaatgaatgaatatcattttgttttt 35667009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 23786797 - 23786880
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||| ||||||||| |||||| ||||| | ||||||||||||||||  |||| ||||||||||    
T  23786797 cagattcatcatttacgtttttagctgtgttgaatgatgtaatctctctaattgaatgaatgaatatatttttatttttgtcaa 23786880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 31235641 - 31235556
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||| ||||||  ||||||||||||||| | |||||| |||||| || ||||||||||| ||||||||||| ||||||||||||||    
T  31235641 cacaaattcattctttacgtttttagcgatattgaatgatgtaacctatcgatttgaataaatgaatatcagtttgtttttgtcaa 31235556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 32521786 - 32521701
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||| ||||||| |||||| ||||| ||||||||||| |||||| |  |||||||||||||||||||||| |||| ||||||||||    
T  32521786 cacaaattcatcctttacgattttaacggtgttgaatgatgtaatccatcgatttgaatgaatgaatatcgttttatttttgtcaa 32521701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 46339274 - 46339347
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattt 90  Q
    |||||||||||| |||||||||||| | ||||||||| |||||| |||| |||||||||||| |||||||||||    
T  46339274 cacagattcatcctttacgtttttaacagtgttgaatgatgtaatctcttgatttgaatgaaagaatatcattt 46339347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 12502064 - 12502023
Alignment:
Q  62 ctctcgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12502064 ctctcgatttgaatgaatgaatatcattttgtttttgtcaac 12502023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 12527698 - 12527657
Alignment:
Q  62 ctctcgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12527698 ctctcgatttgaatgaatgaatatcattttgtttttgtcaac 12527657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 35261519 - 35261599
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||| |||||||| |||||| ||| |||||  || || |||||||||||||||||||||| |||||||||    
T  35261519 cagattcatcctttatgtttttagtggtgttaaatgatgtactctatcaatttgaatgaatgaatatcattctgtttttgt 35261599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 17611613 - 17611696
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||  ||| |||||||||  |||||||| |||||  || || ||||||||||||||||||| |||||||||||||||    
T  17611613 cagattcatcccttatgtttttagcaatgttgaatgatgtactctatcaatttgaatgaatgaatatcgttttgtttttgtcaa 17611696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 46818243 - 46818176
Alignment:
Q  35 gtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||| ||||||||||| |||||| || |||||||||||  ||||||||| |||||||||||||||    
T  46818243 gtttttaacggtgttgaatgatgtaatctatcgatttgaatttatgaatatcgttttgtttttgtcaa 46818176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 19560229 - 19560298
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||| |||||| || |||| ||||||| || |||||||||| ||||||||||||||||||| |||||||    
T  19560229 tttacttttttaacgatgttaaataatgcaatctctcgatttaaatgaatgaatatcattttatttttgt 19560298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 20083560 - 20083640
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| ||||| ||| ||||| |||| ||| |||||   | ||||||||||||||| |||||||||||||||||||    
T  20083560 cagattcatcatttacatttgtagcgatgttaaatgatgtactatatcgatttgaatgaataaatatcattttgtttttgt 20083640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 37849072 - 37849139
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    ||||| |||||||||||||||||  | ||||  | ||||||||||||||||||||||||||| |||||    
T  37849072 tttacatttttagcggtgttgaaataagtaatttatcgatttgaatgaatgaatatcattttattttt 37849139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 13592364 - 13592287
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||| ||||| |||||||| |||||||||| ||||  || ||||||| |||||||| || |||||||||||||    
T  13592364 cagattcatcctttacatttttagcagtgttgaata-tgtactctatcgattttaatgaatggatctcattttgttttt 13592287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 24770519 - 24770556
Alignment:
Q  66 cgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  24770519 cgatttgaatgaatgaatatcgttttgtttttgtcaac 24770556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 28044582 - 28044545
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  28044582 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 28044545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 39328620 - 39328583
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  39328620 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 39328583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 48208156 - 48208197
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaa 60  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  48208156 cagattcatcctttacgtttttagcggtgttgaatgatgtaa 48208197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 48316645 - 48316608
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  48316645 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 48316608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 99
Target Start/End: Complemental strand, 3267040 - 3267009
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||||||||||||||||||||||||||||    
T  3267040 atttgaatgaatgaatatcattttgtttttgt 3267009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 12141133 - 12141099
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||| ||||||||||||    
T  12141133 tcgatttgaatgaatgaatatcgttttgtttttgt 12141099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 24610082 - 24610048
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||| ||||||||||    
T  24610082 atttgaatgaatgaatatcattttatttttgtcaa 24610048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 41553259 - 41553225
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  41553259 atttgaatgaatgaatatcgttttgtttttgtcaa 41553225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 48061687 - 48061721
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||| ||||||||||||    
T  48061687 tcgatttgaatgaatgaatatcgttttgtttttgt 48061721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 43369618 - 43369549
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||| | |||||| |||||| || || |||| |||||||||||||| |||| |||||||    
T  43369618 tttacgttttcagcgatattgaatgatgtaatctatcaatttaaatgaatgaatatcgttttatttttgt 43369549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 35665012 - 35664925
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaat--aatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||  || ||||||||||||||| |||||| |  ||||||  ||||| |||| ||||||| |||||  |||||||||||||||    
T  35665012 cacagatttctcctttacgtttttagcgatgttgattctaatgtattctctcaatttaaatgaataaatattgttttgtttttgtcaa 35664925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 320; Significance: 1e-180; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 113 - 472
Target Start/End: Original strand, 17701835 - 17702194
Alignment:
Q  113 gcttaaagatatggtaagaagtatgactgctctttctaacttactagaatcacactagggagaagcacttaaaattgcaacatgtatccttaataggatt 212  Q
    |||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  17701835 gcttaaagatatggtaagaagtatgatttctatttctaacttactagaatcacactagggagaagcacttaaaattgcaacatgtttccttaataagatt 17701934  T
Q  213 ccaactaaagcaactacacaaactcaatatatttatgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaaaacttgctcata 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17701935 ccaactaaagcaactacacaaactcaatatatttatgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaatacttgctcata 17702034  T
Q  313 aacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctattaacatcttccccggcacgctccttaaatataaactccaaaagc 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || |||||||||||||    
T  17702035 aacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctgttaacatcttccccggcacgctctttaagtacaaactccaaaagc 17702134  T
Q  413 gtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacaggttc 472  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17702135 gtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacaggttc 17702194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 238 - 472
Target Start/End: Original strand, 17690802 - 17691036
Alignment:
Q  238 aatatatttatgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaattagc 337  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17690802 aatatatttctgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaatacttgctcataaacagaaggacctaaatcaattagc 17690901  T
Q  338 atctttgtaacatttctaatcagttctctattaacatcttccccggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtccttatct 437  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| ||||||||| |||| |||||||||    
T  17690902 atctttgtaacatttctaatcagttctctgttaacatcttccccggcacgctccttgaatacaaactccaaaagcatattcgacaatcgattccttatct 17691001  T
Q  438 ggtttgaataaataacattttctctccacaggttc 472  Q
    |||||||||||||||||||||||||||||||||||    
T  17691002 ggtttgaataaataacattttctctccacaggttc 17691036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 234 - 472
Target Start/End: Original strand, 17683872 - 17684110
Alignment:
Q  234 actcaatatatttatgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaat 333  Q
    |||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  17683872 actcgatatatttctcggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaattcttgctcataaacagaaggacctaaatcaat 17683971  T
Q  334 tagcatctttgtaacatttctaatcagttctctattaacatcttccccggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtcctt 433  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  17683972 tagcatctttgtaacatttctaatcagttctctgttaacatcttccccggcacactccttaaatacaaactccaaaagcgtattcgacagttgagtcctt 17684071  T
Q  434 atctggtttgaataaataacattttctctccacaggttc 472  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  17684072 atctggtttgaataaataacaatttctctccacaggttc 17684110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 234 - 472
Target Start/End: Complemental strand, 17570503 - 17570265
Alignment:
Q  234 actcaatatatttatgggattcagccttgtaagattcagctaaaacttgcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaat 333  Q
    |||| ||| |||| || ||||||||| ||||  | |||||| ||||||| ||||| | |||||| ||  |||||||||||||||||| ||||||||| ||    
T  17570503 actcgataaatttctgagattcagccctgtagaactcagctgaaacttgtagaaacgaagtctcgaattcttgctcataaacagaagaacctaaatccat 17570404  T
Q  334 tagcatctttgtaacatttctaatcagttctctattaacatcttccccggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtcctt 433  Q
    |||||||||||||| |||| ||||||||||| |||||||||||||||| ||||| |||||  |||  || ||||||||| |||||||||||||||||||     
T  17570403 tagcatctttgtaatatttttaatcagttctatattaacatcttccccagcacgttccttgcatactaattccaaaagcatattcgacagtcgagtcctg 17570304  T
Q  434 atctggtttgaataaataacattttctctccacaggttc 472  Q
    ||||| ||||| ||||||||||| ||| |||||||||||    
T  17570303 atctgttttgagtaaataacattctctgtccacaggttc 17570265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 282 - 472
Target Start/End: Complemental strand, 17563359 - 17563169
Alignment:
Q  282 gcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctattaacatcttcccc 381  Q
    ||||||||||| |||||||  ||| | ||||||| |||||||||  |||||||||||||||||| | | ||||||||||| ||||||||||| |||| ||    
T  17563359 gcagaaaaggattctcaaattcttccccataaacggaaggacctgtatcaattagcatctttgttatacttctaatcagtcctctattaacaacttcgcc 17563260  T
Q  382 ggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacaggttc 472  Q
    |||||||||  |   ||  || ||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  17563259 ggcacgctcactgcgtactaattccaaaagcatattcaacagtcgagtccttatctggtttgaatgaagaacattttctctccacaggttc 17563169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 21060137 - 21060055
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  21060137 agattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 21060055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 27752150 - 27752232
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||    
T  27752150 agattcatcttttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcatttcgtttttgtcaa 27752232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 7242008 - 7242091
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  7242008 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 7242091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 7247183 - 7247266
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  7247183 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 7247266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 34881941 - 34882024
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  34881941 cagattcatcctttatgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 34882024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 781612 - 781692
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| || ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  781612 cagattcatccttcacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 781692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 3271257 - 3271177
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||    
T  3271257 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgattatcattttgtttttgt 3271177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 10649866 - 10649949
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  10649866 cagattcatcatttacgtttttaacggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 10649949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 27266714 - 27266631
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  27266714 cagattcatcatttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaacgaataccattttgtttttgtcaa 27266631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 7886796 - 7886712
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  7886796 cacagattcatcttttacgttcttagcggtgttgaatgatgtaatctctc-atttgaatgaatgaatatcgttttgtttttgtcaa 7886712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 19280781 - 19280709
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  19280781 tttatgtttttagcggtgttgaataatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 19280709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 18677309 - 18677242
Alignment:
Q  31 ttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttg 98  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  18677309 ttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttg 18677242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 30371845 - 30371928
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||  ||||||||||||||||||| ||| |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  30371845 cagattcatcccttacgtttttagcggtgtttaatgatgtaatctctctatttgaatgaatgaatatcattttgtttttgtcaa 30371928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 7150179 - 7150107
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||| ||||||||||    
T  7150179 tttacgtttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatatcattttatttttgtcaa 7150107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 41184295 - 41184216
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||||||||| ||| |||||| ||||||||||||||||||| ||||||||||||||||||    
T  41184295 cagattcatcctttacgtttttagcggtgtt-aatgatgtaatctctcgatttgaatgaatgcatatcattttgtttttgt 41184216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 16981516 - 16981599
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||  |||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||| ||||||||||    
T  16981516 cagattcattctttacgtttttagcggtgttgaatgatgtaatatctcgatttgaataaatgaatatcattttatttttgtcaa 16981599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 30299068 - 30299151
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| || |||  ||||||||| ||||||||||||||||||| ||||||||||    
T  30299068 cagattcatcctttacgtttttagcggtgttgaatgatttaatatctcgatttaaatgaatgaatatcattttatttttgtcaa 30299151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 35475190 - 35475115
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    ||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||| |||||    
T  35475190 attcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatcattttattttt 35475115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 43148951 - 43149034
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||| |||||||||||||||||| || ||| |||||||||||||||||||||||||||| | ||||||||||    
T  43148951 cagattcatcctttacatttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatatcattgtatttttgtcaa 43149034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 8772033 - 8771959
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttt 96  Q
    ||||||| ||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  8772033 attcatcctttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttt 8771959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 42580113 - 42580178
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatat 85  Q
    ||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  42580113 agattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 42580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 43008159 - 43008090
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||||||||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  43008159 tttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatattattttgtttttgt 43008090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 30298433 - 30298516
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||  |||||||||||||||||||||||| || ||  |||||||||| ||| ||||||||||||||||||||||||||    
T  30298433 cagattcattctttacgtttttagcggtgttgaatgatatagtctctcgatttaaataaatgaatatcattttgtttttgtcaa 30298516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 4954214 - 4954299
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||| ||||||| ||||| |||||||||||||||||  |||||| |||||||||||||||||| |||||||| || ||||||||||    
T  4954214 cacatattcatcctttacatttttagcggtgttgaacgatgtaatctctcgatttgaatgaataaatatcatcttatttttgtcaa 4954299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 20257553 - 20257473
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||||| ||||||||||||||| |||||||| || ||| || ||||||||||| |||||||||| ||||||||||    
T  20257553 cacagattcatcatttacgtttttagcgatgttgaatgatataatctatcgatttgaattaatgaatatcgttttgttttt 20257473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 19259656 - 19259587
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||||||||||| |||||||  |||||| ||||||||||||||| || |||||||||||||||||||    
T  19259656 tttacgtttttagcgatgttgaacgatgtaatctctcgatttgaatggataaatatcattttgtttttgt 19259587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 15571131 - 15571208
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttt 96  Q
    ||||||||||  ||| |||||||| |||||||||| |||||| || | |||||||||||||||||||| |||||||||    
T  15571131 cagattcatccattatgtttttagtggtgttgaatgatgtaatctatggatttgaatgaatgaatatcgttttgtttt 15571208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 2057691 - 2057607
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctc-----gatttgaatgaatgaatatcattttgtttttgtca 101  Q
    ||||||| |||||||||||||||||||||||| |||||  ||||      ||||||||||||||||||||||||| |||||||||    
T  2057691 attcatcctttacgtttttagcggtgttgaatgatgtattctcttaatttgatttgaatgaatgaatatcattttatttttgtca 2057607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 7612910 - 7612831
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||||||||||| ||| |  || ||||  ||||| |||||||||| |||||||||||||||    
T  7612910 attcatcttttacgtttttagcggtgttgaatgatgaactctatcga-atgaataaatgaatatcgttttgtttttgtcaa 7612831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 11768223 - 11768307
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatc-attttgtttttgtcaa 102  Q
    |||||||||| | ||||||||||||| |||||||||||||||  | ||||||| |||||||||||||| |||||  |||||||||    
T  11768223 cagattcatcctatacgtttttagcgatgttgaataatgtaacatatcgattttaatgaatgaatatcgatttttattttgtcaa 11768307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 38007568 - 38007656
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgtt-gaata--atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||| ||||| ||||||||||||||||| |||| | ||   |||||| || |||||||||||||||||||||| |||||||||||||||    
T  38007568 cacatattcaccttttacgtttttagcgatgtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 38007656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 14726297 - 14726249
Alignment:
Q  55 atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    |||||| || |||||||||||||||||||||| ||||||||||||||||    
T  14726297 atgtaatctatcgatttgaatgaatgaatatcgttttgtttttgtcaac 14726249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 36057183 - 36057103
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||| ||| ||||||||||||  | |||| |||||||||   | ||||||||||||||||||||||||||| |||||||    
T  36057183 cagatttatcatttacgtttttaatgatgttaaataatgtattatatcgatttgaatgaatgaatatcattttatttttgt 36057103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 37483274 - 37483347
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||| |||| |||||||||| |||||||| |||||| || ||||||    |||||||||||||||||||||||||    
T  37483274 attcatcctttatgtttttagcgatgttgaatgatgtaatctatcgatt----tgaatgaatatcattttgtttttgt 37483347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 103
Target Start/End: Original strand, 13422197 - 13422232
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    ||||||||||||||||||||||||||||||||||||    
T  13422197 atttgaatgaatgaatatcattttgtttttgtcaac 13422232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 8088036 - 8088002
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||||||||||||||    
T  8088036 atttgaatgaatgaatatcattttgtttttgtcaa 8088002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 6011964 - 6011927
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  6011964 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 6011927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 9113551 - 9113514
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  9113551 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 9113514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 35851061 - 35851093
Alignment:
Q  67 gatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||||||||||||||    
T  35851061 gatttgaatgaatgaatatcattttgtttttgt 35851093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 97
Target Start/End: Complemental strand, 43261684 - 43261649
Alignment:
Q  62 ctctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||| |||||||||||||||||||||||||    
T  43261684 ctctcgatttaaatgaatgaatatcattttgttttt 43261649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 177786 - 177752
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||| ||||||||||    
T  177786 atttgaatgaatgaatatcattttttttttgtcaa 177752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 8984812 - 8984778
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  8984812 atttgaatgaatgaatatcgttttgtttttgtcaa 8984778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 11073811 - 11073777
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||| ||||||||||    
T  11073811 atttgaatgaatgaatatcattttatttttgtcaa 11073777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 13007494 - 13007528
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  13007494 atttgaatgaatgaatatcgttttgtttttgtcaa 13007528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 24229610 - 24229576
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||| ||||||||||||    
T  24229610 tcgatttgaatgaatgaatatcgttttgtttttgt 24229576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 26825692 - 26825729
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  26825692 tcgatttgaatgaatgaatatcgttttatttttgtcaa 26825729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 97
Target Start/End: Complemental strand, 8096325 - 8096293
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||||||||||||||| ||||||||||    
T  8096325 tcgatttgaatgaatgaatatcgttttgttttt 8096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 22978776 - 22978712
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatc 86  Q
    ||||||| |||||||| ||||| ||||||||| |||||   | |||||| |||||||||||||||    
T  22978776 attcatcctttacgttattagcagtgttgaatgatgtactttatcgattagaatgaatgaatatc 22978712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 28235840 - 28235896
Alignment:
Q  46 tgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||| ||| || ||||| ||||  |||||||||||||||||||||||| ||||    
T  28235840 tgttgaatgatgcaatctctcaatttatatgaatgaatatcattttgtttttttcaa 28235896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 3e-40; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 269 - 469
Target Start/End: Original strand, 15196324 - 15196524
Alignment:
Q  269 tcagctaaaacttgcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctat 368  Q
    |||||| |||||||||| |||||| |||||||  |||||  |||||| |||||||||||||| |||||||| ||||| | || ||||||||||| |||||    
T  15196324 tcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatatttgttatatatctaatcagttttctat 15196423  T
Q  369 taacatcttccccggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacag 468  Q
     |||| |||| || |||   |||||  |||  ||  |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15196424 caacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacag 15196523  T
Q  469 g 469  Q
    |    
T  15196524 g 15196524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 269 - 469
Target Start/End: Original strand, 15216742 - 15216942
Alignment:
Q  269 tcagctaaaacttgcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctat 368  Q
    |||||| |||||||||| |||||| |||||||  |||||  |||||| |||||||||||||| |||||||| ||||| | || ||||||||||| |||||    
T  15216742 tcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatatttgttatatatctaatcagttttctat 15216841  T
Q  369 taacatcttccccggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacag 468  Q
     |||| |||| || |||   |||||  |||  ||  |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15216842 caacaacttctccagcatagtccttgcatactaataccaaaagcatattcgacaatcgagtccttatctggtttgaataaataacattttctctccacag 15216941  T
Q  469 g 469  Q
    |    
T  15216942 g 15216942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 281 - 472
Target Start/End: Original strand, 15195685 - 15195876
Alignment:
Q  281 tgcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctattaacatcttccc 380  Q
    |||||||||||| |||||||  ||||| ||||||| ||||| |||||||| |||||||| ||||| | ||||||||||| || | | |||||| |||| |    
T  15195685 tgcagaaaaggattctcaaattcttgcacataaacggaaggtcctaaatccattagcatatttgttatatttctaatcacttttatgttaacaacttctc 15195784  T
Q  381 cggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacaggttc 472  Q
    | |||   | |||  |||  || ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15195785 cagcatagtacttgcatactaattcccaaagcgtattcgacaatcgagtccttatctggtttgaataaataacattttcgctccacaggttc 15195876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 281 - 472
Target Start/End: Original strand, 15216103 - 15216294
Alignment:
Q  281 tgcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctattaacatcttccc 380  Q
    |||||||||||| |||||||  ||||| ||||||| ||||| |||||||| |||||||| ||||| | ||||||||||| || | | |||||| |||| |    
T  15216103 tgcagaaaaggattctcaaattcttgcacataaacggaaggtcctaaatccattagcatatttgttatatttctaatcacttttatgttaacaacttctc 15216202  T
Q  381 cggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacaggttc 472  Q
    | |||   | |||  |||  || ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15216203 cagcatagtacttgcatactaattcccaaagcgtattcgacaatcgagtccttatctggtttgaataaataacattttcgctccacaggttc 15216294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 20266528 - 20266611
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20266528 cagattcatcctttacgtttttagtggtgttgaataatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 20266611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 9687060 - 9686977
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  9687060 cagattcatcctttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatatcattttgtttttgtcaa 9686977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 25406139 - 25406056
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  25406139 cagattcatcttttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatatcattttatttttgtcaa 25406056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 30879301 - 30879384
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  30879301 cagattcattctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 30879384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 50165956 - 50165871
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  50165956 cacagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattttatttttgtcaa 50165871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 51868497 - 51868417
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  51868497 attcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 51868417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 11454163 - 11454246
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  11454163 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaataaatatcattttatttttgtcaa 11454246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 7342948 - 7343028
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||| |||||||    
T  7342948 cagattcatcctttacgtttttagcggtgttgagtgatgtaatctctcgatttgaatgaatgaatatcattttatttttgt 7343028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 9172716 - 9172799
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||| |||| ||||||||||    
T  9172716 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatctttttatttttgtcaa 9172799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 9180698 - 9180781
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||| |||| ||||||||||    
T  9180698 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatctttttatttttgtcaa 9180781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 11709562 - 11709479
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  11709562 cagattcatcctttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttttcaa 11709479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 45805684 - 45805606
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||| |||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  45805684 cagattcatcctttacgtttttaacggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttattttt 45805606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 19715750 - 19715669
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtc 100  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||| |||| ||||||||||||||||||| ||||||||    
T  19715750 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttaaatgaatgaatatcattttatttttgtc 19715669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 27914960 - 27914879
Alignment:
Q  21 gattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||| ||||| |||||||||||||||||| ||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  27914960 gattcatcctttacatttttagcggtgttgaatgatgtaatatcttgatttgaatgaatgaatatcattttgtttttgtcaa 27914879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 41081561 - 41081476
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||| |||||||||||||||  |||||||| |||||  || ||||||||||||||||||||||||||||||||||||||    
T  41081561 cacagattcatgttttacgtttttagcactgttgaatgatgtactctatcgatttgaatgaatgaatatcattttgtttttgtcaa 41081476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 32676990 - 32676910
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||||| |||||||||| |||||| |||| ||||||||||||| ||||||||||| |||||||    
T  32676990 cagattcatcttttacgtttttagtggtgttgaatgatgtaatctcttgatttgaatgaataaatatcattttatttttgt 32676910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 34519354 - 34519438
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    |||||||||| |||||||||||||||||  || || |||||| | ||||||||||||||||||||||||||||||||||||||||    
T  34519354 cagattcatcctttacgtttttagcggtaatggatgatgtaatccctcgatttgaatgaatgaatatcattttgtttttgtcaac 34519438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 48217666 - 48217746
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||| ||||| |||||||| ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  48217666 attcatcctttacatttttagcagtgttaaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 48217746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 5324414 - 5324331
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||  ||||||||||||||| |||||||| |||||| |||||||||| |||||||||||| |||||||||||||||||    
T  5324414 cagattcatgctttacgtttttagcgatgttgaatgatgtaatctctcgatttaaatgaatgaataacattttgtttttgtcaa 5324331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 19723539 - 19723622
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||||||||| |||||||||| |||||| |||||||||||||||||||||||| ||||| ||| ||||||    
T  19723539 cagattcatcctttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatataattttatttatgtcaa 19723622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 31837060 - 31837143
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||| ||| ||||| |||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||||||    
T  31837060 cagatttatcctttacatttttagcggtgttgaatgatataatctctcgatttaaatgaatgaatatcattttgtttttgtcaa 31837143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 33291273 - 33291190
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||||||||  |||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  33291273 cagattcatcatttacgtttttattggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattttatttttgtcaa 33291190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 50148596 - 50148679
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||| ||||||||| |||||||| |||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  50148596 cagattcatcctttacatttttagcgatgttgaatgatgtaatctctcgatttgaatgaaagaatatcattttatttttgtcaa 50148679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 51872089 - 51872172
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||| | ||||||||||    
T  51872089 cagattcatcctttacgtttttagcggtgttgaaggatgtaatctctcaatttgaatgaatgaatatcattctatttttgtcaa 51872172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 35584474 - 35584398
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||| |||||||||| |||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  35584474 attcatcctttacgtttt-agcggtattgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 35584398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 28035363 - 28035441
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttg 98  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||| | |||||||||||||||||||||| ||||||    
T  28035363 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctc-aattgaatgaatgaatatcattttatttttg 28035441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 30818217 - 30818136
Alignment:
Q  21 gattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||| ||||| |||||||||||||||||| ||||||  ||| ||||||||| |||||||||| |||||||||||||||    
T  30818217 gattcatcctttacatttttagcggtgttgaatgatgtaatttcttgatttgaattaatgaatatctttttgtttttgtcaa 30818136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 3871644 - 3871716
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||| ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  3871644 tttatgtttttagcggtgtttaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttttcaa 3871716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 31130450 - 31130370
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||| ||||||| ||||| ||||||||| |||||||| |||||| || ||||||||||||||||||||||| |||||||||    
T  31130450 cacatattcatcctttacatttttagcgatgttgaatgatgtaacctgtcgatttgaatgaatgaatatcagtttgttttt 31130370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 39987644 - 39987724
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||||||||||||| ||||||  | || ||||||||||||||||||| ||||| ||||||    
T  39987644 cagattcatcctttacgtttttagcggtgttgaatgatgtaatttatcaatttgaatgaatgaatatcgttttggttttgt 39987724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 45425921 - 45425839
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||||||||||| | || ||| |||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  45425921 cagattcatcatttacgtttttagcgatattaaatgatgtaatctctcaatttgaatgaatgaatat-attttgtttttgtcaa 45425839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 50271995 - 50271912
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||  |||| |||||||||||||||||| ||||||  ||||||||||||||||| ||||| ||||| ||||||||||    
T  50271995 cagattcatccgttacctttttagcggtgttgaatgatgtaatatctcgatttgaatgaataaatattattttatttttgtcaa 50271912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 38520392 - 38520307
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||| ||||||| ||||||||||||| | |||||||| ||||||  |||| |||| ||||||||||||| ||||||||||||||||    
T  38520392 cacaaattcatcctttacgtttttagtgatgttgaatgatgtaatttctcaatttaaatgaatgaatatgattttgtttttgtcaa 38520307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 40646901 - 40646971
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcatttt 91  Q
    |||||||||| ||||||||||||||||||||||||    ||| ||||||||||||||||||||||||||||||    
T  40646901 cagattcatcctttacgtttttagcggtgttgaat--gttaatctctcgatttgaatgaatgaatatcatttt 40646971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 44637643 - 44637723
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||| |||| |||||| ||||||| |||||||||||||||  || |||||| |||||||||||||||||||| |||||||    
T  44637643 cagatccatcctttacgattttagctgtgttgaataatgtactctatcgattggaatgaatgaatatcattttatttttgt 44637723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 9919614 - 9919695
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||| ||| ||||| ||||||||||| |||||| |||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  9919614 cagatttatcctttacatttttagcggt-ttgaatgatgtaatctctcgatttgaat-aatgaatatcattttatttttgtcaa 9919695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 14545721 - 14545784
Alignment:
Q  39 ttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||| |||||| |||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  14545721 ttagcggtattgaatgatgtaatctctctatttgaacgaatgaatatcattttgtttttgtcaa 14545784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 5701485 - 5701542
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatg 76  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||    
T  5701485 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatg 5701542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 24583165 - 24583247
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaata--atgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||||| ||||||||||||||| | |||| |   |||||  || |||||||||||||||||||||||||||||||||    
T  24583165 cacagattcatcctttacgtttttagcgatcttgattctgatgtattctatcgatttgaatgaatgaatatcattttgttttt 24583247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 34878155 - 34878067
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaa---taatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||||||||||||| ||||      | |||||| || |||||||||||||||||||||| |||||||||||||||    
T  34878155 cacagattcaccttttacgtttttagcgatgtttccatctgatgtaatctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 34878067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 33817021 - 33816940
Alignment:
Q  21 gattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||| |||| ||||||||| || |||||| ||| ||  | | |||||||||||||||| |||||||||||||||||||    
T  33817021 gattcatcctttatgtttttagcagtattgaatgatgaaatattttgatttgaatgaatgaagatcattttgtttttgtcaa 33816940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 33876491 - 33876410
Alignment:
Q  21 gattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||| |||| ||||||||| || |||||| ||| ||  | | |||||||||||||||| |||||||||||||||||||    
T  33876491 gattcatcctttatgtttttagcagtattgaatgatgaaatattttgatttgaatgaatgaagatcattttgtttttgtcaa 33876410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 40880868 - 40880816
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgattt 71  Q
    ||||| |||| ||||||||||||||||||||||||||| ||| ||||||||||    
T  40880868 cagatgcatcatttacgtttttagcggtgttgaataatataatctctcgattt 40880816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 30712116 - 30712081
Alignment:
Q  67 gatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||||||||||||||||||||    
T  30712116 gatttgaatgaatgaatatcattttgtttttgtcaa 30712081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 24583363 - 24583448
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaata--atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||| ||||||||| | |||| |   |||||  || ||||||||||||||||||||||||||||||||| ||||    
T  24583363 cagattcatcctttacatttttagcgatcttgattctgatgtattctatcgatttgaatgaatgaatatcattttgtttttatcaa 24583448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 47133120 - 47133205
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaata--atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||| ||| ||||||||||||||| |||||| |   |||||  || || ||||||||||||||||||| |||||||||||||||    
T  47133120 cagatttatcctttacgtttttagcgatgttgattctgatgtattctatcaatttgaatgaatgaatatcgttttgtttttgtcaa 47133205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 5984082 - 5984119
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  5984082 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 5984119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 49504421 - 49504384
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  49504421 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 49504384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 97
Target Start/End: Complemental strand, 18569120 - 18569088
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||||||||||||||||||||||||||    
T  18569120 tcgatttgaatgaatgaatatcattttgttttt 18569088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 18649832 - 18649756
Alignment:
Q  23 ttcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||||||||||||||||| ||||||||| || ||   | || |||| || |||||||| |||||||||||||||    
T  18649832 ttcatcttttacgtttttagcagtgttgaatgatatactatatcaatttaaacgaatgaatgtcattttgtttttgt 18649756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 21687634 - 21687678
Alignment:
Q  55 atgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||| || |||||||||||||||||||||| ||||||||||||    
T  21687634 atgtaatctatcgatttgaatgaatgaatatcgttttgtttttgt 21687678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 54
Target Start/End: Original strand, 7998015 - 7998050
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaata 54  Q
    |||||||||| |||||||||||||||||||||||||    
T  7998015 cagattcatcctttacgtttttagcggtgttgaata 7998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 11462308 - 11462274
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||| ||||||||||||    
T  11462308 tcgatttgaatgaatgaatatcgttttgtttttgt 11462274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 14872905 - 14872939
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||| |||||||||||||||||||||||||||    
T  14872905 tcgatttaaatgaatgaatatcattttgtttttgt 14872939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 19596298 - 19596252
Alignment:
Q  53 taatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||| || | |||||||||||| ||||||||||||||||||||    
T  19596298 taatgtaatctattgatttgaatgaacgaatatcattttgtttttgt 19596252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 27456758 - 27456792
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  27456758 atttgaatgaatgaatatcgttttgtttttgtcaa 27456792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 32678967 - 32678933
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  32678967 atttgaatgaatgaatatcgttttgtttttgtcaa 32678933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 36894234 - 36894200
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||| ||||||||||||    
T  36894234 tcgatttgaatgaatgaatatcgttttgtttttgt 36894200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 44915908 - 44915942
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||| ||||||||||    
T  44915908 atttgaatgaatgaatatcattttatttttgtcaa 44915942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 50377592 - 50377626
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  50377592 atttgaatgaatgaatatcgttttgtttttgtcaa 50377626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 5685719 - 5685686
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtca 101  Q
    ||||||||||||||||||| ||||||||||||||    
T  5685719 atttgaatgaatgaatatcgttttgtttttgtca 5685686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 32395263 - 32395300
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  32395263 tcgatttgaatggatgaatatcgttttgtttttgtcaa 32395300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 15431488 - 15431456
Alignment:
Q  70 ttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||||||| |||||||||    
T  15431488 ttgaatgaatgaatatcattttgattttgtcaa 15431456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 26535605 - 26535637
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtc 100  Q
    ||||||||||||||||||| |||||||||||||    
T  26535605 atttgaatgaatgaatatcgttttgtttttgtc 26535637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 27872963 - 27873047
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaa-tatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||| |  |||||| |  ||||| |||   |||| |||||||||| ||||||||||||||||||||    
T  27872963 cagattcatcatttacgtttttaacattgttgattggtgtaatctccgaatttaaatgaatgaaatatcattttgtttttgtcaa 27873047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1961 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold1961
Description:

Target: scaffold1961; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 269 - 472
Target Start/End: Original strand, 22 - 225
Alignment:
Q  269 tcagctaaaacttgcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttctaatcagttctctat 368  Q
    |||||| |||||||||| |||||| |||||||  |||||  |||||| |||||||||||||| |||||||| || || |  ||||||||||||| | |||    
T  22 tcagctgaaacttgcagcaaaggattctcaaattcttgcatataaacggaaggacctaaatccattagcatattcgttatttttctaatcagttttttat 121  T
Q  369 taacatcttccccggcacgctccttaaatataaactccaaaagcgtattcgacagtcgagtccttatctggtttgaataaataacattttctctccacag 468  Q
    ||||  ||||| | |||   |||||  |||| ||  |||||||| ||||| | | |||||||||||||||||||||||||||||||||||||||||||||    
T  122 taacgacttcctcagcatagtccttgcatattaatcccaaaagcatattcaaaaatcgagtccttatctggtttgaataaataacattttctctccacag 221  T
Q  469 gttc 472  Q
    ||||    
T  222 gttc 225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 9284146 - 9284228
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  9284146 agattcatcttttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 9284228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 9528732 - 9528649
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  9528732 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 9528649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 20569491 - 20569574
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  20569491 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 20569574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 25274117 - 25274200
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  25274117 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 25274200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 38706565 - 38706482
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  38706565 cagattcatcttttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatgattttgtttttgtcaa 38706482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 53616505 - 53616425
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  53616505 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 53616425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 2115443 - 2115360
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  2115443 cagattcatcctttatgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 2115360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 4644092 - 4644175
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  4644092 cagattcatcctttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 4644175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 34024293 - 34024210
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  34024293 cagattcatcctttacgtttttagcggtgttgaatggtgtaatctctcgatttgaatgaatgaatatcattttgcttttgtcaa 34024210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 45227895 - 45227818
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    ||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  45227895 agattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcatttttttttt 45227818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 51318217 - 51318302
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||| |||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  51318217 cacagattcatcctttacgtttttagcagtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattttatttttgtcaa 51318302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 10359393 - 10359321
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  10359393 tttacgtttttagcggtgttgaatgatgtaatctctcgatttggatgaatgaatatcattttgtttttgtcaa 10359321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 10389607 - 10389526
Alignment:
Q  21 gattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||| |||| |||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  10389607 gattcatcctttatgtttttagcggtgttgaatggtgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 10389526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 1532142 - 1532222
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||| ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||| |||||||    
T  1532142 cagattcatcctttatgtttttagcggtgttgaatgacgtaatctctcgatttgaatgaatgaatatcattttatttttgt 1532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 9645379 - 9645299
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| ||||||||||| |||||||||||| |||||| |||||||||||||||||| ||||| |||||||||||||    
T  9645379 cagattcatcctttacgttttttgcggtgttgaatgatgtaatctctcgatttgaatgaataaatattattttgtttttgt 9645299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 50766366 - 50766290
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttt 96  Q
    ||||||||| | |||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  50766366 agattcatcatctacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattttgtttt 50766290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 43444626 - 43444709
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||| ||| ||||||||||| |||||| ||||| |||||||||||||||||||||||| ||||||||||    
T  43444626 cagattcatcctttacgttcttaacggtgttgaatgatgtaatctctcaatttgaatgaatgaatatcattttatttttgtcaa 43444709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 44947646 - 44947729
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||| ||||||||  ||||||||||    
T  44947646 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgattatcatttcatttttgtcaa 44947729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 12265694 - 12265778
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||| || |||||||||||| |||||||| |||||| || ||||||||||||||||||||||| ||||||||||||||    
T  12265694 cacagattcatcatt-acgtttttagcgatgttgaatgatgtaacctatcgatttgaatgaatgaatatcagtttgtttttgtcaa 12265778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 47417894 - 47417972
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||| |||||||||||||||||||||||| |||||| |||||||||    |||||||||||||||||||||||||    
T  47417894 cacagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatt----tgaatgaatatcattttgtttttgt 47417972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 49680766 - 49680847
Alignment:
Q  21 gattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||| ||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||||||| ||||| ||||||||||    
T  49680766 gatttatcctttacgtttttagcggtgttgaatgatgtaacctctcgatttaaatgaatgaatattattttatttttgtcaa 49680847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 56199330 - 56199410
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||| ||||||||| |||| | ||||||||||||||||||||||| |||||| |||||||    
T  56199330 cagattcatcctttacgtttttagcagtgttgaatgatgtgatctctcgatttgaatgaatgaataccattttatttttgt 56199410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 3336019 - 3335936
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||  || | |||||||||||||||||||  |||||||||||||||    
T  3336019 cagattcatcctttacgtttttagcggtgttgaatgatgtactctattgatttgaatgaatgaatattgttttgtttttgtcaa 3335936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 37188450 - 37188371
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||| ||||||| |||||||||||||||||||| |||||| ||||||||||||||    |||||||||||||||||||||||    
T  37188450 cagatttatcttttgcgtttttagcggtgttgaatgatgtaatctctcgatttgaat----gaatatcattttgtttttgtcaa 37188371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 6973042 - 6973122
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||||| || || |||||| ||||||||||| |||||| ||||| |||| |||||||||||||||||||||||||    
T  6973042 cacagattcatccttcacatttttaacggtgttgaatgatgtaacctctcaatttaaatgaatgaatatcattttgttttt 6973122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 46990986 - 46990909
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttt 96  Q
    |||||||||| ||||||||||||| || ||||||| |||||  || ||||||||||||||||||||||||||| ||||    
T  46990986 cagattcatcatttacgtttttagtggcgttgaatgatgtactctatcgatttgaatgaatgaatatcattttttttt 46990909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 31381570 - 31381491
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||||||||| |||||||||||| |||||||| |||||| ||||||||||||||||| |||||  ||||| |||||||    
T  31381570 cagattcatcttt-acgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaacgaataagattttatttttgt 31381491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 43153870 - 43153793
Alignment:
Q  21 gattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||| ||||||||||||||| | |||||| ||| || |||||||||||||||||| ||||||| |||||||||||    
T  43153870 gattcatcctttacgtttttagcgatattgaatgatgcaatctctcgatttgaatgaataaatatca-tttgtttttgt 43153793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 868395 - 868476
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttg 98  Q
    |||||||||| | |||| ||||||||||||||| ||| || ||| |||||||||| || |||||||||||||||| ||||||    
T  868395 cacagattcaacctttatgtttttagcggtgttaaatgatataatctctcgatttaaacgaatgaatatcattttatttttg 868476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 8670719 - 8670796
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||| ||||||||||||||||| ||||   | |||||| || |||||||||||||||||||||| |||| |||||||    
T  8670719 cagattcaccttttacgtttttagcgatgtt---tgatgtaatctatcgatttgaatgaatgaatatcgttttatttttgt 8670796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 35261426 - 35261497
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactc-tcgatttgaatgaatgaatatcatttt 91  Q
    |||||||||| |||||||||||||  ||||||||| |||||  ||| |||||||||||||||||||||||||||    
T  35261426 cagattcatcctttacgtttttagaagtgttgaatgatgta--ctcatcgatttgaatgaatgaatatcatttt 35261497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 52097760 - 52097690
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtc 100  Q
    ||||||||||||||||| | |||| |||||  || | |||||||||||||||||||| |||||||||||||    
T  52097760 tttacgtttttagcggtatcgaatgatgtactctgttgatttgaatgaatgaatatcgttttgtttttgtc 52097690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 13634398 - 13634435
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13634398 tcgatttgaatgaatgaatatcattttgtttttgtcaa 13634435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 21090376 - 21090429
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttg 72  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||| |||||    
T  21090376 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttg 21090429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 7273677 - 7273605
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcatttt 91  Q
    |||||| ||| |||||||||||| |||||||||||||| ||  || || ||||||||||||||||||| ||||    
T  7273677 cagatttatcatttacgtttttaacggtgttgaataatatactctatcaatttgaatgaatgaatatcgtttt 7273605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 29966560 - 29966632
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcatttt 91  Q
    |||||||||| |||||||||||| || |||||||| ||||||  ||| ||||| ||||||||||||| |||||    
T  29966560 cagattcatcctttacgtttttaacgatgttgaatgatgtaatttcttgatttaaatgaatgaatattatttt 29966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 53444353 - 53444439
Alignment:
Q  20 agattcatcttttacgtttttagcggtgtt--gaat--aatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||| ||||||||||||||||| ||||  | ||  ||||||| || || |||||||||||||||||| ||||||||||||||||    
T  53444353 agattcaccttttacgtttttagcgatgttttgtatctaatgtaatctatctatttgaatgaatgaatattattttgtttttgtcaa 53444439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 6155032 - 6154998
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||||||||||||||    
T  6155032 atttgaatgaatgaatatcattttgtttttgtcaa 6154998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 47320287 - 47320202
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaata--atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||  ||||||||||||||| | |||| |   |||||  || ||||||||||||||||||||| ||||||||||||||||    
T  47320287 cagattcattctttacgtttttagcgatcttgattctgatgtattctatcgatttgaatgaatgaatataattttgtttttgtcaa 47320202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 4142590 - 4142553
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4142590 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 4142553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 19853338 - 19853301
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  19853338 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 19853301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 21686068 - 21686031
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  21686068 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 21686031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 18138761 - 18138705
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatc 86  Q
    |||||||||||||||||||||||| |||||   | | ||||||||||||||||||||    
T  18138761 tttacgtttttagcggtgttgaatgatgtactttattgatttgaatgaatgaatatc 18138705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 49125974 - 49125918
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatc 86  Q
    |||||||||||||||||||||||| |||||   | | ||||||||||||||||||||    
T  49125974 tttacgtttttagcggtgttgaatgatgtactttattgatttgaatgaatgaatatc 49125918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 49410459 - 49410529
Alignment:
Q  21 gattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||| |||||||||||||||||||||||| |||||| |           |||||||||||||||||||||||||||||    
T  49410459 gattcatcctttacgtttttagcggtgttgaatgatgtaatc-----------atgaatgaatatcattttgtttttgtcaa 49410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 2521062 - 2521096
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||| ||||||||||||    
T  2521062 tcgatttgaatgaatgaatatcgttttgtttttgt 2521096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 9048960 - 9048994
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  9048960 atttgaatgaatgaatatcgttttgtttttgtcaa 9048994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 24736232 - 24736155
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||| ||||||| ||||| |||||| ||||||||| |   |||| |  |||||||||||||||||||||| ||||||||||    
T  24736232 cacaaattcatcctttacatttttaacggtgttgatt---gtaatccttcgatttgaatgaatgaatatcgttttgttttt 24736155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 26633497 - 26633463
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||| ||||||||||||    
T  26633497 tcgatttgaatgaatgaatatcgttttgtttttgt 26633463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 36162008 - 36162042
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||| ||||||||||    
T  36162008 atttgaatgaatgaatatcattttatttttgtcaa 36162042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 56040472 - 56040438
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||| ||||||||||||    
T  56040472 tcgatttgaatgaatgaatatcgttttgtttttgt 56040438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 17949149 - 17949112
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  17949149 tcgatttgaatgaatgaatatcgttttgtttctgtcaa 17949112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 17953001 - 17952964
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  17953001 tcgatttgaatgaatgaatatcgttttgtttctgtcaa 17952964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 32766797 - 32766834
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||  |||||||||||||||    
T  32766797 tcgatttgaatgaatgaatattgttttgtttttgtcaa 32766834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 53811301 - 53811338
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  53811301 tcgatttaaatgaatgaatatcgttttgtttttgtcaa 53811338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 43448300 - 43448268
Alignment:
Q  70 ttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||| ||||||||||||||||||||    
T  43448300 ttgaatgaatgactatcattttgtttttgtcaa 43448268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 97
Target Start/End: Original strand, 43510479 - 43510511
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||||||||||||||| ||||||||||    
T  43510479 tcgatttgaatgaatgaatatcgttttgttttt 43510511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 9e-34; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 36234222 - 36234307
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  36234222 cacagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 36234307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 9986197 - 9986114
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||    
T  9986197 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttggatgaatgaatatcattttgtttttgtcaa 9986114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 27249006 - 27248923
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||    
T  27249006 cagattcatcctttacgtttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 27248923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 41431254 - 41431337
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  41431254 cagatttatcctttacgtttttagcggtgttgaataatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 41431337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 4193064 - 4193146
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||| |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  4193064 agattcatcctttacgtttttagcggcgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 4193146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 34600438 - 34600523
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||| |||||||||||||||||||||||  |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  34600438 cacagattcatcctttacgtttttagcggtgttgaacgatgtaatctctcgatttgaatgaatggatatcattttgtttttgtcaa 34600523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 4228349 - 4228429
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  4228349 cagattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 4228429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 8806092 - 8806175
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  8806092 cagattcatcctttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 8806175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 20046937 - 20046854
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  20046937 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattttatttttgtcaa 20046854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 31580510 - 31580427
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  31580510 cagattcatcatttacgtttttagcggtgtacaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 31580427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 2808330 - 2808245
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||| ||||||||||||||| |||||||| ||  || |||||||||||||||||||||||||||||||||||||||||    
T  2808330 cacagattcatcctttacgtttttagcgatgttgaatgatacaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 2808245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 22421952 - 22422037
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||| ||||||||||||||||| |||||| |  ||| |||||||||||||||||||||||||||||||||||||||||    
T  22421952 cacagattcatcctttacgtttttagcggtattgaatgacataatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 22422037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 3725405 - 3725489
Alignment:
Q  18 acagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||| ||||||||||||| |||||| ||| |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  3725405 acagattcatcctttacgtttttagtggtgttaaatgatgtaatctctcgatttgaataaatgaatatcattttgtttttgtcaa 3725489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 21570263 - 21570183
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||| | |||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  21570263 cagattcagcctttatgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 21570183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 40625912 - 40625828
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    |||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  40625912 cagattcatcatttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatggatgaatatcattttgtttttatcaac 40625828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 84036 - 83953
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||||| ||||||||||    
T  84036 cagattcatcctttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaataccattttatttttgtcaa 83953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 25087262 - 25087344
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  25087262 cagattcatcctttacgtttt-agtggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 25087344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 33228843 - 33228760
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||  ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||| ||||||||||    
T  33228843 cagattcatccgttacgtttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatatcattttatttttgtcaa 33228760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 30420895 - 30420973
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||| ||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  30420895 cagattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttattttt 30420973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 8971480 - 8971400
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||| ||||| || ||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  8971480 attcatcctttacattcttagcggtgttgaatgatgtaatctctcgatttgaatgaatggatatcattttgtttttgtcaa 8971400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 7015554 - 7015483
Alignment:
Q  31 ttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  7015554 ttacgtttttagctgtgttgaatgatgtaatctctcgatttgaatgaataaatatcattttgtttttgtcaa 7015483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 21132058 - 21132141
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||  ||||||||||||||||||||||| ||||||  | |||||||||||||||||||||||||||| |||||||||    
T  21132058 cagattcatcccttacgtttttagcggtgttgaatgatgtaatttttcgatttgaatgaatgaatatcattttgattttgtcaa 21132141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 38575340 - 38575258
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||| ||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  38575340 cagattcatcctttatgtttt-agcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttatcaa 38575258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 27949653 - 27949730
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    ||||||||| |||||||||||||||||||||||| || |||  ||||||||| |||||||||||||||||||||||||    
T  27949653 agattcatcatttacgtttttagcggtgttgaatgatataatatctcgatttaaatgaatgaatatcattttgttttt 27949730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 9374415 - 9374335
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||| |||||||||||||| ||||||||| |||||  || |||||||||||||||||||||| |||||||||||||||    
T  9374415 attcatcatttacgtttttagccgtgttgaatgatgtactctgtcgatttgaatgaatgaatatcgttttgtttttgtcaa 9374335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 7558681 - 7558755
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttt 96  Q
    ||||||| ||||||||||||| |||||| ||| |||||| |||||||||||||||||||||||||||||| ||||    
T  7558681 attcatcctttacgtttttagtggtgttaaatgatgtaatctctcgatttgaatgaatgaatatcattttatttt 7558755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 3268690 - 3268610
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||| || ||||  |||||||||||||||||| || ||| |||||||||||||||||||||||||||||| |||||||    
T  3268690 cagattcgtcatttatatttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatatcattttatttttgt 3268610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 6174042 - 6174124
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||| |||||||||||||||||| || ||| |||||||||||||| ||||||||  ||||||||||||||||    
T  6174042 cagattcatcctttacatttttagcggtgttgaatgatataatctctcgatttgaataaatgaata-aattttgtttttgtcaa 6174124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 45128429 - 45128496
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||| ||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| |||||    
T  45128429 tttatgtttttagcggtgttgaatgatgtaatctctcgatttgaattaatgaatatcattttattttt 45128496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 32913490 - 32913538
Alignment:
Q  55 atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32913490 atgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaac 32913538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 26025334 - 26025268
Alignment:
Q  36 tttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||  |||||||| || ||| ||||| |||||||||||||||||||||||||||||||||||    
T  26025334 tttttagcaatgttgaatgatataatctctcaatttgaatgaatgaatatcattttgtttttgtcaa 26025268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 1415820 - 1415867
Alignment:
Q  55 atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||    
T  1415820 atgtaatctatcgatttgaatgaatgaatatcattttgtttttgtcaa 1415867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 37613981 - 37613898
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||  |||||||| ||||||||| ||||  || |||||||||||| ||||||||  |||||||||||||||    
T  37613981 cagattcatcctttactattttagcgatgttgaatagtgtactctatcgatttgaatggatgaatatggttttgtttttgtcaa 37613898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 459124 - 459051
Alignment:
Q  26 atcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||| |||||||| |||||||||| || ||  || |||||||||||||||||||||| |||| |||||||    
T  459124 atcttttatgtttttagtggtgttgaatgatatactctatcgatttgaatgaatgaatatcgttttatttttgt 459051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 12236913 - 12236832
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtc 100  Q
    |||||||||  ||||| |||||||| ||| ||||| || ||| ||||| |||| ||||||||||||||||||| ||||||||    
T  12236913 cagattcattctttacatttttagcagtgctgaatgatataatctctcaatttaaatgaatgaatatcattttatttttgtc 12236832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 32678940 - 32678895
Alignment:
Q  57 gtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||    
T  32678940 gtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 32678895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 8308338 - 8308398
Alignment:
Q  36 tttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttt 96  Q
    ||||||||| |||||||  |||||| || |||||||||||||||||||||| |||||||||    
T  8308338 tttttagcgatgttgaacgatgtaatctatcgatttgaatgaatgaatatcgttttgtttt 8308398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 30923330 - 30923250
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||  |||||| |||||||  |||| ||| |||||  || || ||||||||||||||||||||||||||||||||    
T  30923330 cagattcattatttacgattttagcaatgttaaatgatgtactctatcaatttgaatgaatgaatatcattttgtttttgt 30923250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 4041431 - 4041384
Alignment:
Q  55 atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  4041431 atgtacactatcgatttgaatgaatgaatatcattttatttttgtcaa 4041384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 33923968 - 33924015
Alignment:
Q  55 atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||| || |||||||||||||||||||||| |||||||||||||||    
T  33923968 atgtaatctatcgatttgaatgaatgaatatcgttttgtttttgtcaa 33924015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 40659787 - 40659744
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaac 62  Q
    |||||||||| |||||||||||||||||||||||| ||||||||    
T  40659787 cagattcatcctttacgtttttagcggtgttgaatgatgtaaac 40659744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 7646751 - 7646789
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  7646751 tcgatttgaatgaatgaatatcgttttgtttttgtcaac 7646789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 32448441 - 32448407
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||||||||||||||    
T  32448441 atttgaatgaatgaatatcattttgtttttgtcaa 32448407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 99
Target Start/End: Complemental strand, 33760015 - 33759977
Alignment:
Q  61 actctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  33760015 actctcgatttgaatgaatgaatattattttgtttttgt 33759977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 37994508 - 37994593
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaata--atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||| |||||| | |||||| |   |||||  || || ||||||||||||||||||| |||||||||||||||    
T  37994508 cagattcatcttttacgattttagggatgttgattctgatgtattctatcaatttgaatgaatgaatatcgttttgtttttgtcaa 37994593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 5427696 - 5427659
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  5427696 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 5427659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 13719021 - 13718948
Alignment:
Q  23 ttcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttt 96  Q
    |||||| ||||||||||||||| |||||||| ||| |  || ||  ||||||||||||||||||||||| ||||    
T  13719021 ttcatcatttacgtttttagcgatgttgaatgatgcactctatcattttgaatgaatgaatatcattttatttt 13718948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 4100559 - 4100640
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||| | ||||||||||||||| ||||     |||||| || |||||||||||||||||||||| |||||||||| ||||    
T  4100559 cagattcaccctttacgtttttagcgatgtttgt--atgtaatctatcgatttgaatgaatgaatatcgttttgtttttttcaa 4100640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 24461671 - 24461746
Alignment:
Q  23 ttcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||| ||||||||||||||| |||||| || ||||  || || ||||||||||||||||||| |||| |||||||    
T  24461671 ttcatcctttacgtttttagcgatgttgatta-tgtattctatcaatttgaatgaatgaatatcgttttatttttgt 24461746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 31788729 - 31788765
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtca 101  Q
    |||||||||||||||||||||| ||||||||||||||    
T  31788729 tcgatttgaatgaatgaatatcgttttgtttttgtca 31788765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 36324083 - 36324163
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||  ||||||||||| || |||||||| ||||||  | || |||||||| |||| ||||| |||||||||||||||    
T  36324083 attcatccgttacgtttttaacgatgttgaatgatgtaatatatcaatttgaataaatgtatatcgttttgtttttgtcaa 36324163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 36942947 - 36942911
Alignment:
Q  67 gatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    |||||||||||||||||||| ||||||||||||||||    
T  36942947 gatttgaatgaatgaatatcgttttgtttttgtcaac 36942911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 12677288 - 12677241
Alignment:
Q  55 atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||| || |||||||||||||||||||||| |||||||||| ||||    
T  12677288 atgtaatctgtcgatttgaatgaatgaatatcgttttgtttttatcaa 12677241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 102
Target Start/End: Original strand, 18763743 - 18763778
Alignment:
Q  67 gatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||| |||||||||||||||    
T  18763743 gatttgaatgaatgaatatcgttttgtttttgtcaa 18763778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 12553993 - 12553959
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||| ||||||||||    
T  12553993 atttgaatgaatgaatatcattttatttttgtcaa 12553959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 14955816 - 14955850
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||| ||||||||||||||||||||||||||||||    
T  14955816 atttaaatgaatgaatatcattttgtttttgtcaa 14955850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 31193163 - 31193129
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||| ||||||||||||    
T  31193163 tcgatttgaatgaatgaatatcgttttgtttttgt 31193129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 37876430 - 37876396
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  37876430 atttgaatgaatgaatatcgttttgtttttgtcaa 37876396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 38445439 - 38445473
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||| ||||||||||||    
T  38445439 tcgatttgaatgaatgaatatcgttttgtttttgt 38445473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 41328015 - 41328049
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  41328015 atttgaatgaatgaatatcgttttgtttttgtcaa 41328049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 1421948 - 1421984
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  1421948 tcgatttgaatgaatgaatatcatttt-tttttgtcaa 1421984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 4779026 - 4779063
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||  |||||||||||||||    
T  4779026 tcgatttgaatgaatgaatatagttttgtttttgtcaa 4779063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 17249023 - 17248943
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaata--atgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||| ||||||||||||||| | |||| |   |||||   | ||||||||||||||||||||||||||| |||||    
T  17249023 cagattcatcatttacgtttttagcgatcttgattctgatgtattttatcgatttgaatgaatgaatatcattttattttt 17248943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 27097238 - 27097206
Alignment:
Q  70 ttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||| |||||||||||||||    
T  27097238 ttgaatgaatgaatatcgttttgtttttgtcaa 27097206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 41712644 - 41712572
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcatttt 91  Q
    |||||| ||| ||||| ||||||| | |||||||| ||||||  | || |||| |||||||||||||||||||    
T  41712644 cagatttatcatttacatttttagtgatgttgaatgatgtaatttttcaatttaaatgaatgaatatcatttt 41712572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 14906778 - 14906695
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  14906778 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 14906695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 4809193 - 4809276
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  4809193 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 4809276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 29777448 - 29777531
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  29777448 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 29777531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 9072945 - 9073030
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  9072945 cacagattcattctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 9073030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 9498456 - 9498371
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  9498456 cacagattcatcctttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatatcattttatttttgtcaa 9498371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 44099791 - 44099708
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  44099791 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaataaatatcattttgtttttgtcaa 44099708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11725907 - 11725993
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatca-ttttgtttttgtcaa 102  Q
    |||||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  11725907 cacagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatatcatttttgtttttgtcaa 11725993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 33896315 - 33896398
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||| |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  33896315 cagattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaataaatatcattttatttttgtcaa 33896398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 19876425 - 19876506
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttg 98  Q
    |||||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||||||||| ||||||    
T  19876425 cacagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaataaatatcattttatttttg 19876506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 23851349 - 23851269
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||| ||||||||| ||||||| |||||||||| |||||| |||||||||||||||||||| |||||||||||||||||    
T  23851349 cagatttatcttttacttttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgattatcattttgtttttgt 23851269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 43889979 - 43889899
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| ||||||||||||||  ||||||||||||||| ||||| |||| |||||||||||||||||||||||||||    
T  43889979 cagattcatcctttacgtttttagcattgttgaataatgtaatctctcaatttaaatgaatgaatatcattttgtttttgt 43889899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 28240068 - 28240150
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||| ||||||||||||||| |||||||| | |||| || ||||||||||||||||||||||| |||||||||||    
T  28240068 cacagattcatcctttacgtttttagcgatgttgaatgacgtaacctatcgatttgaatgaatgaatatcagtttgtttttgt 28240150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 9619212 - 9619132
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||||||||||||| ||||||  |||| |||||||||||||||||| ||||| |||||||    
T  9619212 cagattcatcctttacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaatataattttatttttgt 9619132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 11267241 - 11267309
Alignment:
Q  23 ttcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcatttt 91  Q
    |||||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||    
T  11267241 ttcatcctttacgtttttagcggtgtcgaatgatgtaatctctcgatttgaatgaatgaatatcatttt 11267309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 43135431 - 43135356
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||| |||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||| |||||||||    
T  43135431 attcatcatttacgtttttagcggtgttgaataat-----ctctcgatttgaatgaatgaatatcattttgcttttgtcaa 43135356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 44578257 - 44578339
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||| ||| |||||||| | ||||||||| |||||| |||||||||||||| ||||||||||||||| |||||||    
T  44578257 cacagattcatcctttgcgtttttaacagtgttgaatgatgtaatctctcgatttgaataaatgaatatcattttatttttgt 44578339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 27746970 - 27746886
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    |||||||||| ||||||||||||||||| |||||| ||||||    | |||||||||||||||||||| ||||||||||||||||    
T  27746970 cagattcatcatttacgtttttagcggtattgaatgatgtaattcattgatttgaatgaatgaatatcgttttgtttttgtcaac 27746886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 37565731 - 37565663
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattt 90  Q
    ||||||| ||||||||||||| |||||||||| |||||| ||||||||||| |||||||||||||||||    
T  37565731 attcatcctttacgtttttagtggtgttgaatgatgtaatctctcgatttgcatgaatgaatatcattt 37565663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 39152997 - 39152917
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||| |||||||||||||||   | |||||||||||||||||||||| |||| |||||||    
T  39152997 cagattcatcctttacgtttttagcagtgttgaataatgtactttatcgatttgaatgaatgaatatcgttttatttttgt 39152917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 34612033 - 34612116
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||  ||||||||||||| | |||| ||| |||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  34612033 cagattcattctttacgtttttagtgatgttcaatgatgtaatctctcgattttaatgaatgaatatcattttatttttgtcaa 34612116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 17949747 - 17949829
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtca 101  Q
    |||||||| | || ||||||||||||||||||||| || |||  |||| ||||||||||||||||||||||||| ||||||||    
T  17949747 cagattcacccttcacgtttttagcggtgttgaatgatataatttctcaatttgaatgaatgaatatcattttgattttgtca 17949829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 32724335 - 32724253
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||| ||| |||||||||||||||||||||||| |||||| |||||||||  ||||||||||||| ||||| ||||| ||||    
T  32724335 agatttatcctttacgtttttagcggtgttgaatgatgtaatctctcgattcaaatgaatgaatataattttatttttatcaa 32724253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 2656102 - 2656163
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaat 83  Q
    ||||||| |||||||||||||||||||||||| |||||| |||||||||| |||||||||||    
T  2656102 attcatcatttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaat 2656163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 43192202 - 43192133
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcat 88  Q
    |||||||||| |||| ||||||||||||||||||| |||||| |||||||||||| |||||| |||||||    
T  43192202 cagattcatcctttatgtttttagcggtgttgaatgatgtaatctctcgatttgactgaatggatatcat 43192133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 33342663 - 33342742
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| ||||| |||| |||||||||||||||||||| || | ||||||||||||||||||||  |||||||||||    
T  33342663 cagattcatcatttacatttt-agcggtgttgaataatgtaatctattgatttgaatgaatgaatatcggtttgtttttgt 33342742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 11464401 - 11464459
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaa 78  Q
    ||||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  11464401 agattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaa 11464459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 17427080 - 17427000
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||| ||| ||||||||||||||| ||||||||| ||||| || || |||  |||||||||||||| ||||||||||||    
T  17427080 cagatttatcctttacgtttttagcgatgttgaatattgtaatctatcaattcaaatgaatgaatatcgttttgtttttgt 17427000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 30568194 - 30568108
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgtt-gaata--atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||| | ||||||||||||||| |||| | |||  |||||| || || |||||||||||||||||||||||||||||||||||    
T  30568194 cagattcaccctttacgtttttagcgatgtttgtatatgatgtaatctatcaatttgaatgaatgaatatcattttgtttttgtcaa 30568108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 1236570 - 1236485
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaata--atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||||||||||  | |||| |   |||||  || ||||||||||||||||||||||||||||||||||||||    
T  1236570 cagattcatcctttacgtttttagcaatcttgattctgatgtattctatcgatttgaatgaatgaatatcattttgtttttgtcaa 1236485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 21238002 - 21238089
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaata--atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| | ||||||||||||||| |||||| ||  |||||  || || ||||||||||||||||||  |||||||||||||||    
T  21238002 cacagattcaccctttacgtttttagcgatgttgattatgatgtattctatcaatttgaatgaatgaatattgttttgtttttgtcaa 21238089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 35580678 - 35580733
Alignment:
Q  48 ttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    |||||| |||||| ||||| | || |||||||||||||||||||||||||||||||    
T  35580678 ttgaatgatgtaatctctcaacttaaatgaatgaatatcattttgtttttgtcaac 35580733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 24099129 - 24099044
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaata--atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||| | ||||||||||||||| |||||| |   |||||  || || ||||||||||||||||||| |||||||||||||||    
T  24099129 cagattcaccctttacgtttttagcgatgttgattctgatgtattctgtcaatttgaatgaatgaatatcgttttgtttttgtcaa 24099044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 10377939 - 10377976
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  10377939 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 10377976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 12654295 - 12654372
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||| |||||||||||| || |||| ||| |||||   | ||||||||||||||| ||||||||||| |||||||    
T  12654295 attcatcatttacgtttttaacgatgttaaatgatgtattatatcgatttgaatgaataaatatcattttatttttgt 12654372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 24395647 - 24395732
Alignment:
Q  269 tcagctaaaacttgcagaaaaggagtctcaaaaacttgctcataaacagaaggacctaaatcaattagcatctttgtaacatttct 354  Q
    |||||| ||||||| |||||| ||| ||||||| ||||  |||||||||  ||||||||||| |||||||| ||||| | ||||||    
T  24395647 tcagctgaaacttgaagaaaatgagcctcaaaatcttgaccataaacagctggacctaaatccattagcatttttgttatatttct 24395732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 33299083 - 33299163
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||  |||||| |||||||||| |||||  || || |||| |||||| ||||||| ||||||||||||    
T  33299083 cagattcatcatttacaattttaggggtgttgaatgatgtattctatcaatttaaatgaaagaatatcgttttgtttttgt 33299163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 102
Target Start/End: Complemental strand, 7883063 - 7883028
Alignment:
Q  67 gatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||| |||||||||||||||    
T  7883063 gatttgaatgaatgaatatcgttttgtttttgtcaa 7883028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 3673709 - 3673743
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  3673709 atttgaatgaatgaatatcgttttgtttttgtcaa 3673743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 16794520 - 16794586
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatat 85  Q
    |||||||||| |||||  ||||| |||| |||||| ||||||  | |||||||||||||||||||||    
T  16794520 cagattcatcctttactattttatcggtcttgaatgatgtaatatatcgatttgaatgaatgaatat 16794586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 29617096 - 29617062
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||| ||||||||||||||||    
T  29617096 atttgaatgaatgaatataattttgtttttgtcaa 29617062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 40618894 - 40618860
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  40618894 atttgaatgaatgaatatcgttttgtttttgtcaa 40618860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 3240596 - 3240683
Alignment:
Q  19 cagattcatcttttacgttttt--agcggtgttgaat--aatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||  |||| |||||| |  ||||||  || || ||||||||||||||| ||| |||||||||||||||    
T  3240596 cagattcatcctttacgtttttttagcgatgttgattctaatgtattctatcaatttgaatgaatgaacatcgttttgtttttgtcaa 3240683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 23230908 - 23230945
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  23230908 tcgatttgaatgaatgaatatcgttttgcttttgtcaa 23230945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 40211124 - 40211091
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttg 98  Q
    |||||||||||||||||||||| |||||||||||    
T  40211124 tcgatttgaatgaatgaatatcgttttgtttttg 40211091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 45445635 - 45445602
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttg 98  Q
    |||||||||||||||||||||| |||||||||||    
T  45445635 tcgatttgaatgaatgaatatcgttttgtttttg 45445602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 15597012 - 15596940
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||| |||| ||||||| |  ||  || || ||||||||||||||||||| ||||||||| |||||    
T  15597012 tttacgttttttgcggggttgaatgacatactctatcaatttgaatgaatgaatatcgttttgttttcgtcaa 15596940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 97
Target Start/End: Complemental strand, 33214495 - 33214463
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||||||||||||||| ||||||||||    
T  33214495 tcgatttgaatgaatgaatatcgttttgttttt 33214463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 34680743 - 34680663
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||| ||| |||| |||||||  | |||| |||||||||   | || |||||||||||||||||||||||| |||||||    
T  34680743 cagatttatcatttatgtttttaatgatgttaaataatgtattatatcaatttgaatgaatgaatatcattttatttttgt 34680663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 1e-32; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 8497190 - 8497273
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  8497190 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 8497273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 8027970 - 8027890
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  8027970 attcatcctttacgtttttagcggtgttgaataatgtaatctctcgatttgaatgaatgaatatcattttgtttctgtcaa 8027890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 4984422 - 4984339
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  4984422 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 4984339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 17237141 - 17237058
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  17237141 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgttgttgtcaa 17237058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 25064458 - 25064541
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  25064458 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 25064541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 23947171 - 23947089
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||| |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  23947171 agattcatcctttacgtttttagcggcgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 23947089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 12653166 - 12653249
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| | |||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  12653166 cagattcatcctgtacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattttgtttttgtcaa 12653249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 16419380 - 16419463
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| ||||||||||    
T  16419380 cagattcatcttttacgtttttagcggtgttgaatgatgtaatctctcaatttgaataaatgaatatcattttatttttgtcaa 16419463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 7880957 - 7880879
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  7880957 cagattcattctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgttttt 7880879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 28634970 - 28634885
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||| ||||||||||||||| |||||||| |||||| || ||||||||||||||||||||||| ||||||||||||||    
T  28634970 cacagattcatcctttacgtttttagcgatgttgaatgatgtaacctatcgatttgaatgaatgaatatcagtttgtttttgtcaa 28634885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 4468774 - 4468853
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttg 98  Q
    |||||||||| |||||  ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  4468774 cagattcatcctttacacttttagcggtgttgaatgatgtaaactctcgatttaaatgaatgaatatcattttgtttttg 4468853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 7875899 - 7875821
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||  |||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  7875899 cagattcattctttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatatcattttgttttt 7875821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 17334975 - 17335052
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttt 96  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| ||||    
T  17334975 cagattcatcatttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatgattttttttt 17335052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 4088682 - 4088762
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||||||||||||| |  ||| ||||| ||||||||||||||||||||||||||||||||    
T  4088682 cagattcatcctttacgtttttagcggtgttgaatgaaataatctctcaatttgaatgaatgaatatcattttgtttttgt 4088762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 12168902 - 12168980
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||| ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||    
T  12168902 cagattcatcctttaagtttttagcggtgttgaatgatgtaa--tctcgatttgaatgaatgaatatcattttatttttgt 12168980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 97
Target Start/End: Original strand, 34489428 - 34489501
Alignment:
Q  24 tcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    ||||| ||||||||||||||||| ||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  34489428 tcatcctttacgtttttagcggttttgaataatgtaatctatcgatttgaatgaataaatatcattttgttttt 34489501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 12059628 - 12059548
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||||||| |||||||    
T  12059628 cagattcatcctttacgtttttagcggtgttgaatgatataatctcttgatttaaatgaatgaatatcattttatttttgt 12059548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 3174067 - 3173984
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||| ||||||||||||||| ||||||  | |||||||||||||| |||||| ||||||||||||||||    
T  3174067 cagattcatcctttacgttcttagcggtgttgaatgatgtaatttttcgatttgaatgaacgaatattattttgtttttgtcaa 3173984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 7028094 - 7028161
Alignment:
Q  36 tttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    |||| ||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||    
T  7028094 ttttcagcggtgttgaatgatataatctctcgatttgaatgaatgaatatcattttgtttttgtcaac 7028161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 33740433 - 33740355
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||| |||||||||||||| ||||||||| |||||| |||| ||||| ||||||||||||| |||||||||||    
T  33740433 cagattcatcctttacgtttttagcagtgttgaatgatgtaatctcttgatttaaatgaatgaatattattttgttttt 33740355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 35001812 - 35001892
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||| ||| ||||||||||||||| |||||||| |||||| || | ||||||||||||||||||||||||| |||||||    
T  35001812 cagattaatcctttacgtttttagcgatgttgaatgatgtaatcttttgatttgaatgaatgaatatcattttatttttgt 35001892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 8196259 - 8196196
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatat 85  Q
    ||||||| ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  8196259 attcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 8196196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 16892671 - 16892611
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaat 79  Q
    |||| ||||| ||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  16892671 cagaatcatcatttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaat 16892611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 15612440 - 15612366
Alignment:
Q  23 ttcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||||||||||||| |||||||||| |||||   | ||||| |||||||||||||||  ||||||||||    
T  15612440 ttcatcttttacgtttttagtggtgttgaatgatgtactttatcgatctgaatgaatgaatatagttttgttttt 15612366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 606468 - 606505
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||||||||||||||||||||||    
T  606468 tcgatttgaatgaatgaatatcattttgtttttgtcaa 606505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 20619662 - 20619721
Alignment:
Q  38 tttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||||||||| || ||| |||| ||||| ||||||||||||||||||| |||||    
T  20619662 tttagcggtgttgaatgatataatctcttgatttaaatgaatgaatatcattttattttt 20619721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 10228904 - 10228983
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgta---aactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||| |||||||||||| ||||||||||| || ||   | ||||||||||||||||||||| |||||||| |||||||    
T  10228904 attcatcctttacgtttttaacggtgttgaatgatataattatctctcgatttgaatgaatgaa-atcattttatttttgt 10228983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 29319700 - 29319666
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||||||||||||||    
T  29319700 atttgaatgaatgaatatcattttgtttttgtcaa 29319666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 7515029 - 7514992
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  7515029 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 7514992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 32327046 - 32327009
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  32327046 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 32327009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 33110836 - 33110901
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatca 87  Q
    ||||||| ||||||||||| || ||||||||| || ||| | ||||||||||||||||| ||||||    
T  33110836 attcatcctttacgtttttggcagtgttgaatgatataatcactcgatttgaatgaatggatatca 33110901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 100
Target Start/End: Complemental strand, 14174897 - 14174862
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtc 100  Q
    |||||||||||||||||||||| |||||||||||||    
T  14174897 tcgatttgaatgaatgaatatcgttttgtttttgtc 14174862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 100
Target Start/End: Complemental strand, 14179433 - 14179398
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtc 100  Q
    |||||||||||||||||||||| |||||||||||||    
T  14179433 tcgatttgaatgaatgaatatcgttttgtttttgtc 14179398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 1450562 - 1450528
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||||||||||||||||||||||| |||||||    
T  1450562 tcgatttgaatgaatgaatatcattttatttttgt 1450528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 12170732 - 12170766
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||| ||||||||||||    
T  12170732 tcgatttgaatgaatgaatatcgttttgtttttgt 12170766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 31851704 - 31851670
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||| ||||||||||||||||    
T  31851704 atttgaatgaatgaatattattttgtttttgtcaa 31851670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 3913400 - 3913363
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  3913400 tcgatttgaatgaatgaatatcgttttatttttgtcaa 3913363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 9341477 - 9341440
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  9341477 tcgatttgaatgaatgagtatcgttttgtttttgtcaa 9341440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 33052991 - 33052958
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtca 101  Q
    ||||||||||||||||||| ||||||||||||||    
T  33052991 atttgaatgaatgaatatcgttttgtttttgtca 33052958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 25162657 - 25162738
Alignment:
Q  21 gattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  25162657 gattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 25162738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 32607688 - 32607768
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  32607688 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgt 32607768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 36906341 - 36906424
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  36906341 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 36906424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 4178785 - 4178867
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||| |||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  4178785 agattcatcctttacgtttttagcagtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 4178867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 50611273 - 50611193
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  50611273 cagattcatcctttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatatcattttgtttttgt 50611193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 25631381 - 25631298
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  25631381 cagattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 25631298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 35499055 - 35498972
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||||    
T  35499055 cagattcatcctttacgtttttagcggtgttgaatgatgtaatccctcgatttgaatgaatgaatatcattttatttttgtcaa 35498972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 51202119 - 51202036
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| |||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  51202119 cagattcatcatttacgtttttagcggtgataaataatgtaatctctcgatttgaatgaataaatatcattttgtttttgtcaa 51202036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 12116318 - 12116400
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||| ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  12116318 agattcatcctttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttatttttgtcaa 12116400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 3848774 - 3848694
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||    
T  3848774 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatctttttatttttgt 3848694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 44907254 - 44907174
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| ||||||||||||||| |||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  44907254 cagattcatcctttacgtttttagcgttgttgaatgatgtaatatctcgatttgaatgaatgaatatcattttgtttttgt 44907174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 2342667 - 2342750
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||| |||||||||||| ||  |||||| |||||||||||||||||||||||||||||||||||||||||    
T  2342667 cagattcatcctttacgtctttagcggtgttaaacgatgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 2342750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 38440446 - 38440368
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| |||||    
T  38440446 cagattcatcctttacgtttttagcggtgttgaatgatgtaatctttcgatttgaatgaatgaatatcattttattttt 38440368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 17238026 - 17238107
Alignment:
Q  21 gattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||| || |||||||||||||||||||||||| ||||||  |||| |||||||||||||||||||||||||||||||||||    
T  17238026 gattcttcctttacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaatatcattttgtttttgtcaa 17238107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 29503683 - 29503760
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||| ||||| ||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||    
T  29503683 attcatcctttacatttttagcggtgttgaataatgtaatctattgatttgaatgaatgaatatcattttgtttttgt 29503760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 46934859 - 46934938
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||||| ||||||||||||||| |||||||| ||| || |||||||||||||||||||||||||||||| |||||||    
T  46934859 agattcatcctttacgtttttagcgatgttgaatgatgcaatctctcgatttgaatgaatgaatatcattttatttttgt 46934938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 30648574 - 30648508
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatat 85  Q
    |||||||||| |||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  30648574 cagattcatcctttatgtttttagcggtgttgaattatgtaatctctcgatttgaatgaatgaatat 30648508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 38854888 - 38854811
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||| ||||||||||||||||||   ||| | |||| |||||||||||||||||||||||||||||||||||||||||    
T  38854888 attcatcctttacgtttttagcggtg---aatgacgtaatctctcgatttgaatgaatgaatatcattttgtttttgtcaa 38854811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 37169450 - 37169528
Alignment:
Q  21 gattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||| |||||||||||||||||||||||| |||||| || | |||||||||||| |||| || ||||||||||||    
T  37169450 gattcatcctttacgtttttagcggtgttgaatgatgtaatctattgatttgaatgaaagaatgtcgttttgtttttgt 37169528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 6823481 - 6823396
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||| |||| |||||||||| |||| |||||||||| || || |||| ||||||||||||||||||| ||| ||||||    
T  6823481 cacagattcatcatttaggtttttagcgatgtttaataatgtaatctatcaatttaaatgaatgaatatcattttatttgtgtcaa 6823396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 22803247 - 22803332
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||| ||| ||| ||||||||||||||| |||||||| |||||| || ||||||| ||||||||||||||| ||| ||||||||||    
T  22803247 cacaaatttatcctttacgtttttagcgatgttgaatgatgtaacctatcgatttaaatgaatgaatatcaatttatttttgtcaa 22803332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 49552079 - 49552004
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtt 94  Q
    |||||||||| |||||||||||||| ||||||||| ||||||  |   ||||||||||||||||||||||||||||    
T  49552079 cagattcatcctttacgtttttagcagtgttgaatgatgtaattttatgatttgaatgaatgaatatcattttgtt 49552004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 46178794 - 46178867
Alignment:
Q  26 atcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||| ||||||||||| || |||  | |||||||||||||||||| ||| ||||||||||||    
T  46178794 atcttttacgtttttaacggtgttgaatgatataatatatcgatttgaatgaatgaaaatcgttttgtttttgt 46178867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 39917255 - 39917176
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||||| ||||||||||||| |||||||||| || ||| ||||| |||| |||||| |||||||||||| |||||    
T  39917255 cacagattcatcctttacgtttttagaggtgttgaatgat-taatctctcaattttaatgaaagaatatcattttattttt 39917176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 35175617 - 35175699
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttga--ataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||||||| ||||||  || |||||  || || ||||||||||||||||||| |||| |||||||    
T  35175617 cagattcatcttttacgtttttagcgatgttgattatgatgtattctatcaatttgaatgaatgaatatcgttttatttttgt 35175699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 628798 - 628713
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaata--atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||||||||||| | |||| |   |||||  || || |||||||||||||||||||||||||||||||||||    
T  628798 cagattcatcctttacgtttttagcgatcttgattttgatgtattctatcaatttgaatgaatgaatatcattttgtttttgtcaa 628713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 21533635 - 21533598
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21533635 tcgatttgaatgaatgaatatcattttgtttttgtcaa 21533598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 21916692 - 21916757
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaata 84  Q
    |||||||||| ||||| |||||||||||||||||| ||||||  |||||||||| || ||||||||    
T  21916692 cagattcatcctttacatttttagcggtgttgaatgatgtaatatctcgatttggataaatgaata 21916757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 46979855 - 46979772
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||| ||| ||||||||||||| | ||||||||||||||  || || |||| |||||||||| ||  |||||||||||||||    
T  46979855 cagattaatcctttacgtttttagtgctgttgaataatgtactctatcaattttaatgaatgaaaatagttttgtttttgtcaa 46979772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 47041884 - 47041837
Alignment:
Q  55 atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||| || || |||||||||||||||||||||||||||||||||||    
T  47041884 atgtaatctatctatttgaatgaatgaatatcattttgtttttgtcaa 47041837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 20464788 - 20464754
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||||||||||||||    
T  20464788 atttgaatgaatgaatatcattttgtttttgtcaa 20464754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 53807733 - 53807648
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaata--atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||| ||||||||||||||| | |||| |   |||||  || | ||||| ||||||||||||||||||||||||||||||    
T  53807733 cagattcatcctttacgtttttagcgatcttgattctgatgtattctattgattttaatgaatgaatatcattttgtttttgtcaa 53807648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 6954522 - 6954485
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  6954522 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 6954485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 9797360 - 9797323
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  9797360 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 9797323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 43017150 - 43017187
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  43017150 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 43017187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 98
Target Start/End: Complemental strand, 48650560 - 48650527
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttg 98  Q
    ||||||||||||||||||||||||||||||||||    
T  48650560 tcgatttgaatgaatgaatatcattttgtttttg 48650527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 52922943 - 52922906
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||||||||||||||    
T  52922943 tcgatttgaatgaatgaatatcgttttgtttttgtcaa 52922906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 20911455 - 20911384
Alignment:
Q  28 cttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||| | |||||||||||| |  || || ||||||||||||||||   ||||||||||||||||    
T  20911455 cttttacgtttttagtgatgttgaataatgcactctgtctatttgaatgaatgaat---attttgtttttgtcaa 20911384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 3085114 - 3085080
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||||||||||| ||||    
T  3085114 atttgaatgaatgaatatcattttgtttttctcaa 3085080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 21313301 - 21313335
Alignment:
Q  68 atttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||||||| |||||||||||||||    
T  21313301 atttgaatgaatgaatatcgttttgtttttgtcaa 21313335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 24396373 - 24396291
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||| ||||||| |||| |||||||||  | |||||| |||||  || || |||||||| |||||||||| ||||||||||||    
T  24396373 cacaaattcatcatttaagtttttagcaatattgaatgatgtactctatcaatttgaattaatgaatatcgttttgtttttgt 24396291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 33580132 - 33580178
Alignment:
Q  55 atgtaaactctcgatttgaatgaatgaatatcattttgtttttgtca 101  Q
    |||||| || |||||||||||||||||||||| | ||||||||||||    
T  33580132 atgtaatctatcgatttgaatgaatgaatatcgtcttgtttttgtca 33580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 40487587 - 40487621
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||| ||||||||||||    
T  40487587 tcgatttgaatgaatgaatatcgttttgtttttgt 40487621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Original strand, 40556964 - 40556998
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||| ||||||||||||    
T  40556964 tcgatttgaatgaatgaatatcgttttgtttttgt 40556998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 10108498 - 10108535
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  10108498 tcgatttgaatgaatgaatatcgttttatttttgtcaa 10108535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 10229738 - 10229775
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  10229738 tcgatttgaatgaatgaatatcgttttatttttgtcaa 10229775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 10233332 - 10233369
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  10233332 tcgatttgaatgaatgaatatcgttttatttttgtcaa 10233369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 20608736 - 20608687
Alignment:
Q  53 taatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||  ||||| |||||| |||||||||||| |||||||||||||||    
T  20608736 taatgtactctctcaatttgattgaatgaatatcgttttgtttttgtcaa 20608687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 31794298 - 31794351
Alignment:
Q  30 tttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaat 83  Q
    ||||||||||||||| | ||||||||||||  || ||||||| |||||||||||    
T  31794298 tttacgtttttagcgatattgaataatgtattctatcgatttaaatgaatgaat 31794351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 36910592 - 36910555
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  36910592 tcgatttgaatgaatgaatatcgttttatttttgtcaa 36910555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 38546061 - 38546098
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  38546061 tcgatttgaatgaataaatatcgttttgtttttgtcaa 38546098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 25850065 - 25850097
Alignment:
Q  67 gatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||| ||||||||||||    
T  25850065 gatttgaatgaatgaatatcgttttgtttttgt 25850097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 97
Target Start/End: Complemental strand, 45568271 - 45568239
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgttttt 97  Q
    |||||||||||||||||||||| ||||||||||    
T  45568271 tcgatttgaatgaatgaatatcgttttgttttt 45568239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 16173 - 16092
Alignment:
Q  21 gattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    ||||| || |||||||||||||||||||||||| ||||||  |||| |||||||||||||||||||||||||||||||||||    
T  16173 gattcttcctttacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaatatcattttgtttttgtcaa 16092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 201230 - 201148
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||| ||||||| ||||| ||||||| |||||||||| |||||| || |||||||||||||||||||||||||||||||||||    
T  201230 cacaaattcatcctttacatttttagtggtgttgaatgatgtaatctatcgatttgaatgaatgaatatcattttgtttttgt 201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 83291 - 83212
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||| ||||||||||||||| | |||||| |||||| |||| |||||||||||||||||||||||||||||||||    
T  83291 cagattcatcatttacgtttttagcgat-ttgaatgatgtaatctcttgatttgaatgaatgaatatcattttgtttttgt 83212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 361654 - 361574
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||| ||| |||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||| |||||||    
T  361654 cagatttatcctttacgtttttagcggtgttgaatgatgtaatctctcaatatgaatgaatgaatatcattttatttttgt 361574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 8911 - 8989
Alignment:
Q  17 cacagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgttt 95  Q
    |||| ||||||| ||||| |||| | ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  8911 cacatattcatcctttacattttaaacggtgttgaatgatgtaatctctcgatttgaatgaatgaatatcattttgttt 8989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 4427 - 4499
Alignment:
Q  19 cagattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcatttt 91  Q
    ||||||||||  ||||||||||||||||||||||| |||||| |||| ||||| |||||||||||||||||||    
T  4427 cagattcatcccttacgtttttagcggtgttgaatgatgtaatctcttgatttaaatgaatgaatatcatttt 4499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 36543 - 36464
Alignment:
Q  21 gattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtc 100  Q
    |||||||| ||||||||||||||| |||||||| | |||  || || ||||||||||| ||||||| |||||||||||||    
T  36543 gattcatcatttacgtttttagcgatgttgaatgaagtactctatcaatttgaatgaaagaatatcgttttgtttttgtc 36464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 53272 - 53189
Alignment:
Q  20 agattcatcttttacgtttttagcggtgttgaataatgtaaactctcgatttgaatgaatgaatatcattttgtttttgtcaac 103  Q
    ||||| |||||||| |||||||| | |||||||| |||||   | || ||||||||||||||||||| ||||||||||||||||    
T  53272 agatttatcttttatgtttttagtgatgttgaatgatgtactatatcaatttgaatgaatgaatatcgttttgtttttgtcaac 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 5623 - 5702
Alignment:
Q  22 attcatcttttacgtttttagcggtgttgaataatgta---aactctcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    ||||||| |||||||||||| ||||||||||| || ||   | ||||||||||||||||||||| |||||||| |||||||    
T  5623 attcatcctttacgtttttaacggtgttgaatgatataattatctctcgatttgaatgaatgaa-atcattttatttttgt 5702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 102
Target Start/End: Original strand, 1637 - 1672
Alignment:
Q  67 gatttgaatgaatgaatatcattttgtttttgtcaa 102  Q
    |||||||||||||||||||| |||||||||||||||    
T  1637 gatttgaatgaatgaatatcgttttgtttttgtcaa 1672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 99
Target Start/End: Complemental strand, 1799 - 1765
Alignment:
Q  65 tcgatttgaatgaatgaatatcattttgtttttgt 99  Q
    |||||||||||||||||||||||||||||| ||||    
T  1799 tcgatttgaatgaatgaatatcattttgttattgt 1765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University