View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3839_low_8 (Length: 250)

Name: NF3839_low_8
Description: NF3839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3839_low_8
NF3839_low_8
[»] chr7 (48 HSPs)
chr7 (143-235)||(10332409-10332501)
chr7 (142-240)||(23897240-23897338)
chr7 (143-240)||(9767785-9767882)
chr7 (143-240)||(6018358-6018455)
chr7 (143-239)||(7399329-7399424)
chr7 (169-240)||(10418557-10418628)
chr7 (146-240)||(14195748-14195842)
chr7 (142-235)||(1810909-1811002)
chr7 (145-240)||(144976-145069)
chr7 (149-234)||(9918173-9918258)
chr7 (149-234)||(9926085-9926170)
chr7 (143-240)||(11804698-11804795)
chr7 (142-234)||(26249074-26249166)
chr7 (142-240)||(1589239-1589338)
chr7 (143-237)||(4450674-4450768)
chr7 (143-234)||(6039297-6039388)
chr7 (143-225)||(3585522-3585604)
chr7 (150-240)||(5236873-5236963)
chr7 (150-240)||(8977477-8977567)
chr7 (154-240)||(18468350-18468436)
chr7 (142-240)||(23173684-23173782)
chr7 (143-196)||(6046571-6046624)
chr7 (143-240)||(18986744-18986841)
chr7 (143-240)||(19001372-19001469)
chr7 (143-240)||(19154818-19154915)
chr7 (143-196)||(19201502-19201555)
chr7 (143-240)||(20754217-20754314)
chr7 (143-240)||(23127894-23127991)
chr7 (143-203)||(2565943-2566003)
chr7 (152-240)||(3736336-3736424)
chr7 (188-240)||(5485633-5485685)
chr7 (143-240)||(8052429-8052525)
chr7 (143-236)||(39270273-39270365)
chr7 (143-195)||(1254696-1254747)
chr7 (173-233)||(15611070-15611129)
chr7 (145-240)||(1586191-1586286)
chr7 (143-201)||(9078881-9078940)
chr7 (143-202)||(13280797-13280856)
chr7 (141-240)||(17887728-17887826)
chr7 (177-240)||(21502854-21502917)
chr7 (143-240)||(5220967-5221065)
chr7 (143-185)||(13287710-13287752)
chr7 (145-191)||(17974464-17974510)
chr7 (145-191)||(17981120-17981166)
chr7 (143-196)||(9722485-9722538)
chr7 (208-240)||(4988217-4988249)
chr7 (208-240)||(4992315-4992347)
chr7 (163-227)||(21234116-21234180)
[»] chr3 (34 HSPs)
chr3 (142-240)||(22470401-22470499)
chr3 (143-233)||(7805749-7805839)
chr3 (146-240)||(22246997-22247090)
chr3 (143-240)||(819846-819943)
chr3 (141-240)||(18535770-18535869)
chr3 (155-221)||(19387871-19387937)
chr3 (141-227)||(19912593-19912679)
chr3 (170-240)||(17135092-17135162)
chr3 (143-240)||(12517290-12517387)
chr3 (140-240)||(3114706-3114806)
chr3 (162-240)||(13906602-13906680)
chr3 (142-227)||(6075985-6076070)
chr3 (143-240)||(18457111-18457208)
chr3 (143-240)||(20891645-20891742)
chr3 (143-240)||(27852603-27852700)
chr3 (143-240)||(34276437-34276534)
chr3 (142-202)||(2508718-2508778)
chr3 (144-240)||(3429225-3429321)
chr3 (143-227)||(52935533-52935617)
chr3 (152-227)||(12771211-12771286)
chr3 (142-225)||(20886883-20886966)
chr3 (154-240)||(8115305-8115391)
chr3 (146-240)||(8145248-8145342)
chr3 (143-240)||(31283903-31284000)
chr3 (143-191)||(8995034-8995082)
chr3 (153-240)||(8765674-8765761)
chr3 (153-240)||(8770564-8770651)
chr3 (142-181)||(19573575-19573614)
chr3 (142-185)||(24516595-24516638)
chr3 (143-185)||(27412658-27412700)
chr3 (142-191)||(1725947-1725996)
chr3 (147-196)||(25850952-25851001)
chr3 (155-227)||(12372344-12372416)
chr3 (144-191)||(51118481-51118529)
[»] chr2 (31 HSPs)
chr2 (143-240)||(17891731-17891828)
chr2 (143-240)||(35680100-35680197)
chr2 (140-227)||(21905739-21905826)
chr2 (142-240)||(16157083-16157181)
chr2 (142-240)||(22627384-22627481)
chr2 (142-240)||(26651636-26651734)
chr2 (141-237)||(23010041-23010137)
chr2 (143-240)||(17350978-17351075)
chr2 (143-185)||(25196666-25196708)
chr2 (143-240)||(28918188-28918285)
chr2 (142-239)||(32438678-32438776)
chr2 (143-240)||(16257860-16257957)
chr2 (144-240)||(28930274-28930371)
chr2 (142-226)||(32137911-32137995)
chr2 (152-202)||(22569092-22569142)
chr2 (154-212)||(25882581-25882639)
chr2 (155-240)||(29717369-29717455)
chr2 (144-202)||(29892228-29892286)
chr2 (155-240)||(18758301-18758386)
chr2 (143-235)||(18970775-18970865)
chr2 (143-240)||(32087048-32087145)
chr2 (142-226)||(32130698-32130782)
chr2 (143-181)||(8445462-8445500)
chr2 (145-227)||(18458366-18458448)
chr2 (158-240)||(27421071-27421153)
chr2 (144-185)||(18120546-18120587)
chr2 (142-191)||(23861134-23861183)
chr2 (142-191)||(42153683-42153732)
chr2 (148-232)||(11464323-11464407)
chr2 (142-226)||(32139333-32139417)
chr2 (143-191)||(34369372-34369420)
[»] chr8 (36 HSPs)
chr8 (142-234)||(4007150-4007242)
chr8 (143-240)||(13313271-13313368)
chr8 (143-240)||(24380353-24380450)
chr8 (142-232)||(17649969-17650059)
chr8 (143-240)||(37527026-37527123)
chr8 (143-240)||(25180721-25180818)
chr8 (143-240)||(13833603-13833700)
chr8 (143-240)||(14271841-14271938)
chr8 (143-240)||(19704986-19705083)
chr8 (143-240)||(22501833-22501930)
chr8 (143-203)||(21695413-21695473)
chr8 (145-240)||(14077122-14077216)
chr8 (145-240)||(24583173-24583268)
chr8 (143-233)||(24908911-24909001)
chr8 (143-233)||(24911132-24911222)
chr8 (146-240)||(30117661-30117755)
chr8 (143-240)||(20400334-20400431)
chr8 (143-195)||(5151964-5152016)
chr8 (143-240)||(6886668-6886767)
chr8 (148-240)||(7985117-7985208)
chr8 (143-239)||(19784781-19784876)
chr8 (140-240)||(28858837-28858935)
chr8 (143-240)||(24381325-24381423)
chr8 (142-235)||(12342890-12342982)
chr8 (143-240)||(17510904-17511001)
chr8 (152-233)||(17835550-17835631)
chr8 (143-240)||(18446859-18446956)
chr8 (143-239)||(24389757-24389853)
chr8 (178-234)||(5856785-5856841)
chr8 (152-240)||(15176441-15176529)
chr8 (145-191)||(11222342-11222388)
chr8 (152-193)||(17976278-17976319)
chr8 (155-240)||(18007536-18007620)
chr8 (143-240)||(23867829-23867926)
chr8 (146-202)||(15557405-15557461)
chr8 (142-202)||(28621642-28621702)
[»] chr1 (39 HSPs)
chr1 (153-240)||(16363623-16363710)
chr1 (143-240)||(15542308-15542405)
chr1 (153-240)||(15571698-15571785)
chr1 (142-235)||(24901214-24901307)
chr1 (162-240)||(17445066-17445144)
chr1 (142-240)||(21663089-21663187)
chr1 (143-240)||(27912064-27912161)
chr1 (143-235)||(24464619-24464711)
chr1 (142-193)||(7221563-7221614)
chr1 (142-240)||(14235283-14235381)
chr1 (142-240)||(22621794-22621891)
chr1 (143-240)||(729136-729233)
chr1 (143-224)||(21450783-21450864)
chr1 (143-232)||(26647357-26647446)
chr1 (147-239)||(28009747-28009839)
chr1 (142-234)||(33192358-33192450)
chr1 (143-235)||(17543113-17543207)
chr1 (143-240)||(20033118-20033214)
chr1 (142-201)||(26652613-26652672)
chr1 (143-238)||(35133886-35133981)
chr1 (155-233)||(16114807-16114885)
chr1 (142-224)||(27973319-27973401)
chr1 (143-240)||(18098248-18098345)
chr1 (155-240)||(21848626-21848711)
chr1 (164-240)||(12011205-12011281)
chr1 (143-227)||(12210278-12210362)
chr1 (142-185)||(15526805-15526848)
chr1 (143-202)||(27116223-27116282)
chr1 (141-191)||(15630931-15630981)
chr1 (143-185)||(16817108-16817150)
chr1 (142-180)||(21333070-21333108)
chr1 (143-240)||(22665786-22665883)
chr1 (143-239)||(24283003-24283100)
chr1 (143-240)||(25959459-25959556)
chr1 (143-239)||(9782979-9783075)
chr1 (142-202)||(14782568-14782628)
chr1 (143-227)||(17365784-17365868)
chr1 (143-191)||(18827445-18827493)
chr1 (143-191)||(34104967-34105015)
[»] chr4 (36 HSPs)
chr4 (143-240)||(17335355-17335452)
chr4 (143-240)||(9849707-9849804)
chr4 (143-240)||(17434434-17434531)
chr4 (145-233)||(12836072-12836160)
chr4 (142-240)||(18750824-18750922)
chr4 (143-240)||(12246565-12246662)
chr4 (143-240)||(12616714-12616811)
chr4 (143-240)||(25025106-25025203)
chr4 (143-235)||(1832054-1832146)
chr4 (155-234)||(9054011-9054090)
chr4 (154-240)||(11512037-11512123)
chr4 (143-237)||(15166471-15166565)
chr4 (142-239)||(14573450-14573546)
chr4 (143-240)||(17277845-17277942)
chr4 (154-234)||(23083706-23083786)
chr4 (144-202)||(8968072-8968130)
chr4 (142-191)||(8928312-8928361)
chr4 (143-240)||(17218529-17218625)
chr4 (143-236)||(4611510-4611603)
chr4 (156-240)||(7583792-7583876)
chr4 (144-240)||(9536756-9536852)
chr4 (142-191)||(26047144-26047193)
chr4 (142-191)||(26052325-26052374)
chr4 (143-191)||(21166483-21166531)
chr4 (177-240)||(10236589-10236652)
chr4 (143-202)||(11782530-11782589)
chr4 (144-191)||(12289161-12289208)
chr4 (144-191)||(13208483-13208530)
chr4 (143-185)||(11252129-11252171)
chr4 (143-189)||(25982217-25982263)
chr4 (142-239)||(9263349-9263446)
chr4 (143-196)||(13588752-13588805)
chr4 (143-196)||(25096341-25096394)
chr4 (163-239)||(17711307-17711383)
chr4 (156-240)||(20828152-20828236)
chr4 (143-239)||(22350240-22350336)
[»] scaffold0386 (2 HSPs)
scaffold0386 (145-235)||(4874-4964)
scaffold0386 (141-233)||(13472-13564)
[»] scaffold0043 (1 HSPs)
scaffold0043 (143-240)||(88436-88533)
[»] scaffold0024 (1 HSPs)
scaffold0024 (143-240)||(41339-41435)
[»] chr6 (32 HSPs)
chr6 (152-237)||(22564558-22564643)
chr6 (142-234)||(21687128-21687220)
chr6 (144-240)||(24469798-24469894)
chr6 (161-240)||(21060422-21060501)
chr6 (143-240)||(19721846-19721942)
chr6 (150-225)||(27961229-27961304)
chr6 (143-240)||(9848163-9848260)
chr6 (143-240)||(14641632-14641729)
chr6 (144-240)||(23644318-23644414)
chr6 (146-240)||(32759969-32760060)
chr6 (161-240)||(21079739-21079818)
chr6 (143-240)||(9519732-9519829)
chr6 (142-240)||(14076396-14076494)
chr6 (143-240)||(19246276-19246373)
chr6 (154-239)||(22845862-22845947)
chr6 (142-193)||(9338977-9339028)
chr6 (143-202)||(14727172-14727231)
chr6 (142-225)||(22404253-22404336)
chr6 (146-240)||(8246613-8246706)
chr6 (153-227)||(9841032-9841106)
chr6 (143-233)||(9897868-9897957)
chr6 (145-191)||(29230152-29230198)
chr6 (143-224)||(24480040-24480121)
chr6 (168-240)||(9507295-9507367)
chr6 (153-227)||(13216314-13216389)
chr6 (142-240)||(17822022-17822121)
chr6 (142-240)||(4340664-4340762)
chr6 (143-240)||(19593975-19594073)
chr6 (206-240)||(20080736-20080770)
chr6 (143-240)||(30356263-30356360)
chr6 (152-240)||(2588296-2588384)
chr6 (140-236)||(6628971-6629067)
[»] scaffold0451 (2 HSPs)
scaffold0451 (153-240)||(10103-10190)
scaffold0451 (143-240)||(5730-5827)
[»] chr5 (34 HSPs)
chr5 (141-240)||(26069249-26069348)
chr5 (154-240)||(17469569-17469655)
chr5 (142-240)||(26253492-26253590)
chr5 (143-236)||(34488861-34488954)
chr5 (142-240)||(23387546-23387644)
chr5 (152-240)||(18832222-18832310)
chr5 (143-239)||(19053102-19053198)
chr5 (143-227)||(23110196-23110280)
chr5 (142-233)||(19761580-19761671)
chr5 (141-196)||(29988001-29988056)
chr5 (142-240)||(19003764-19003862)
chr5 (146-240)||(24162014-24162108)
chr5 (142-240)||(26122382-26122480)
chr5 (143-240)||(17831695-17831790)
chr5 (143-240)||(18939520-18939617)
chr5 (143-240)||(20860339-20860436)
chr5 (143-185)||(24142462-24142504)
chr5 (153-227)||(28666505-28666579)
chr5 (143-245)||(29799039-29799141)
chr5 (142-191)||(20102892-20102941)
chr5 (143-240)||(26117437-26117534)
chr5 (147-202)||(15691306-15691361)
chr5 (145-240)||(22797422-22797517)
chr5 (153-240)||(22845805-22845892)
chr5 (143-202)||(23266854-23266913)
chr5 (143-202)||(23338929-23338988)
chr5 (143-202)||(25572478-25572537)
chr5 (153-240)||(25920831-25920918)
chr5 (143-185)||(21352970-21353012)
chr5 (143-193)||(23214825-23214875)
chr5 (142-226)||(24658298-24658383)
chr5 (152-240)||(24263759-24263847)
chr5 (142-202)||(25400737-25400797)
chr5 (153-225)||(28254906-28254978)
[»] scaffold0019 (2 HSPs)
scaffold0019 (143-227)||(24815-24899)
scaffold0019 (147-225)||(35193-35271)
[»] scaffold0016 (1 HSPs)
scaffold0016 (142-240)||(4824-4922)
[»] scaffold0005 (1 HSPs)
scaffold0005 (142-239)||(243830-243926)
[»] scaffold0014 (1 HSPs)
scaffold0014 (142-240)||(192122-192220)
[»] scaffold0032 (1 HSPs)
scaffold0032 (142-239)||(92827-92924)
[»] scaffold0115 (1 HSPs)
scaffold0115 (142-234)||(36130-36222)
[»] scaffold0555 (1 HSPs)
scaffold0555 (142-193)||(6500-6551)
[»] scaffold0360 (1 HSPs)
scaffold0360 (163-234)||(16488-16558)
[»] scaffold0086 (2 HSPs)
scaffold0086 (173-240)||(12816-12883)
scaffold0086 (175-225)||(12107-12157)
[»] scaffold0637 (1 HSPs)
scaffold0637 (143-240)||(7386-7483)


Alignment Details
Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 10332501 - 10332409
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgc 235  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||| |||| | || ||||||||||||||||||||||    
T  10332501 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagtatgttttacaagtagaaaagaggagtattagatcaattgc 10332409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 23897338 - 23897240
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||| ||| |||||||||| | ||||||| |||||||||||| ||||||||||||||    
T  23897338 ttgatgacatgtcatcttacattattcttaacatgtttttcagtcaattttagtatgttttaccagcaaaacagaggagtattatatcaattgcctatg 23897240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 9767882 - 9767785
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||| | |||||| ||| |||||||||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||    
T  9767882 tgatgacaggtcatctcacgttattcttagcatgtttttcagccattttcagtaggttttaccagaaaaatagaggagtattagatcaattgcctatg 9767785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 6018455 - 6018358
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| |||||||||||||||||||||| ||||||||||||||  ||| |||| ||||| | | ||||| ||||||||||||||| |||||||||||    
T  6018455 tgatgatatgtcatcttatgttatttttagcatgtttttcagtcgattttagtaggttttaccaacaaaacagaggagtattagattaattgcctatg 6018358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 7399424 - 7399329
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    |||||||||||||||||| |||||| |||||||||||| ||||| |||| |||| | ||| | ||||||| ||| ||||||||||||||||||||||    
T  7399424 tgatgacatgtcatcttacgttattcttaacatgtttt-cagtcgtttttagtagggtttactagcaaaacagaagagtattagatcaattgcctat 7399329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 10418628 - 10418557
Alignment:
Q  169 ttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||||||| |||||||||||||| ||||| | ||||||| |||||||||||||| ||||||||||||    
T  10418628 ttaacatgttttttagtcattttcagtaggttttactagcaaaacagaggagtattagagcaattgcctatg 10418557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 14195842 - 14195748
Alignment:
Q  146 tgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| || ||||||||||||| ||| ||||||||||||||||||| |||| ||||| | ||||||| |||||||||||||| || |||| ||||    
T  14195842 tgacaggtgatcttatgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacagaggagtattagagcagttgcttatg 14195748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 1811002 - 1810909
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgc 235  Q
    ||||||||||||||||||| ||||||  || ||||||||||||||||||| |||| ||||| ||  || |||||| ||||||||||| ||||||    
T  1811002 ttgatgacatgtcatcttacgttattcgtagcatgtttttcagtcattttaagtaagttttacatccagaatagatgagtattagattaattgc 1810909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 145069 - 144976
Alignment:
Q  145 atgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||| |||| ||||| | |||||||  || |||||||||| ||||||||||||    
T  145069 atgacatg-catcttatgttattcttaacatgtttt-cagtcatttttagtaggttttaccagcaaaacggatgagtattagagcaattgcctatg 144976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 9918258 - 9918173
Alignment:
Q  149 catgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattg 234  Q
    |||||||||||| |||||| || |||||||||| |||||||||||||| ||||  ||  ||||||||||| |||||||| ||||||    
T  9918258 catgtcatcttacgttattcttgacatgtttttgagtcattttcagtaagtttaacatccaaaatagaggggtattagagcaattg 9918173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 234
Target Start/End: Complemental strand, 9926170 - 9926085
Alignment:
Q  149 catgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattg 234  Q
    |||||||||||| |||||| || |||||||||| |||||||||||||| ||||  ||  ||||||||||| |||||||| ||||||    
T  9926170 catgtcatcttacgttattcttgacatgtttttgagtcattttcagtaagtttaacatccaaaatagaggggtattagagcaattg 9926085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 11804795 - 11804698
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||  |||||||| ||||||  ||||||||||||||||||||||||||| |||||   |||||||  ||| ||||||||| | ||||||||||    
T  11804795 tgatgacagatcatcttacgttattcataacatgtttttcagtcattttcagtaggttttagcagcaaaaaggagcagtattagaacgattgcctatg 11804698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 26249074 - 26249166
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattg 234  Q
    ||||||||| ||||||||| ||||||  || |||||||||||||||||||||||| |||||   |||||||  || |||||||||| ||||||    
T  26249074 ttgatgacaggtcatcttacgttattcatagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggatgagtattagaacaattg 26249166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 1589338 - 1589239
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtca-ttttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| ||||||||||| |||| ||| |||||||||||| || ||||||||| |||||    ||||| |||||||||||||||| |||||| ||||    
T  1589338 ttgatgacaggtcatcttatgctattcttagcatgtttttcagccatttttcagtaggttttatctgcaaagtagaggagtattagattaattgcatatg 1589239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 4450768 - 4450674
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt-gcaagcaaaatagaggagtattagatcaattgcct 237  Q
    ||||||||  |||||||| |||||| ||| |||||||| ||||||||||||||| ||||| |||| |||||| ||||||||||||| | |||||||    
T  4450768 tgatgacagatcatcttacgttattcttagcatgttttccagtcattttcagtaggttttagcaa-caaaatggaggagtattagaacgattgcct 4450674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 6039297 - 6039388
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattg 234  Q
    ||||| ||||||||||||  ||||| ||||||||||||||||||||||||||||  |||| | |||| || |||| | ||||||| ||||||    
T  6039297 tgatgtcatgtcatcttacattattcttaacatgtttttcagtcattttcagtagattttaccagcataacagagtaatattagagcaattg 6039388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 3585522 - 3585604
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtatta 225  Q
    |||||||| |||||||||  ||||| ||| ||||||||||| |||||||||||| |||||   |||||||| |||||||||||    
T  3585522 tgatgacaagtcatcttacattattcttagcatgtttttcaatcattttcagtaggttttagcagcaaaatggaggagtatta 3585604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 5236873 - 5236963
Alignment:
Q  150 atgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||||| |||||| ||| ||||||||||||| |||||||||| |||||   |||||||  |||||| |||||| ||||| ||||||    
T  5236873 atgtcatcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaaggaggaggattagaacaatttcctatg 5236963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 8977477 - 8977567
Alignment:
Q  150 atgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||||| |||||| ||| ||| ||||||| |||||||||||| |||||   |||||||  ||||||||||||| ||| ||||||||    
T  8977477 atgtcatcttacgttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaaggaggagtattagaacaactgcctatg 8977567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 18468350 - 18468436
Alignment:
Q  154 catcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||| |||||| ||||||||||||||||||| ||| |||| ||||| |||| | ||  |||||||| |||||||||||| ||||    
T  18468350 catcttacgttattcttaacatgtttttcagtcaattttagtaagttttacaagaagaaaggaggagtaatagatcaattgcttatg 18468436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 23173684 - 23173782
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||| ||||| | || |||||    ||||||  ||||||||||||| |||||| |||||    
T  23173684 ttgatgacatgtcatcttacgttattcttagcatgtttttcagttatttttaataggttttagctgcaaaaaggaggagtattagaacaattgtctatg 23173782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 6046624 - 6046571
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagta 196  Q
    |||||| | |||||||||||||||| ||||||||||||| ||||||||||||||    
T  6046624 tgatgataagtcatcttatgttattcttaacatgttttttagtcattttcagta 6046571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 18986744 - 18986841
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| |||||||| |||||| ||| ||||||||||||||| ||||||||  ||||   |||||||  ||||||||||||| | | ||||||||    
T  18986744 tgatgacatatcatcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaaggaggagtattagaacgactgcctatg 18986841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 19001372 - 19001469
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| |||||||| |||||| ||| ||||||||||||||| ||||||||  ||||   |||||||  ||||||||||||| | | ||||||||    
T  19001372 tgatgacatatcatcttacgttattcttagcatgtttttcagtcaatttcagtagattttagcagcaaaaaggaggagtattagaacgactgcctatg 19001469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 19154915 - 19154818
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| |||||| ||| ||||||||||||   ||||||||| ||||  | |||||||||||||| ||||| |  |||||||||||    
T  19154915 tgatgacaggtcatcttacgttattcttagcatgtttttcagcttttttcagtaggtttaaccagcaaaatagaggactattatagtaattgcctatg 19154818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 19201555 - 19201502
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagta 196  Q
    |||||||| |||||||||||||||| |||||||||||||| || ||||||||||    
T  19201555 tgatgacaggtcatcttatgttattcttaacatgtttttctgttattttcagta 19201502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 20754314 - 20754217
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| |||||| ||| ||||||||||||   ||||||||| ||||  | |||||||||||||| ||||| |  |||||||||||    
T  20754314 tgatgacaggtcatcttacgttattcttagcatgtttttcagcttttttcagtaggtttaaccagcaaaatagaggactattatagtaattgcctatg 20754217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 23127894 - 23127991
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| | ||||||||| |||||||||| ||| | ||||||||  ||| |||| ||||| | ||||||  |||||||||||||||||||||| ||||    
T  23127894 tgatgataggtcatcttacgttatttttagcatatatttcagtctattttagtaggttttaccagcaaagcagaggagtattagatcaattgcttatg 23127991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 2566003 - 2565943
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttg 203  Q
    |||||||| ||||||||| | |||| ||| |||||||||||||||||||||||| ||||||    
T  2566003 tgatgacaagtcatcttacgatattcttagcatgtttttcagtcattttcagtaggttttg 2565943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 3736424 - 3736336
Alignment:
Q  152 gtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| |||||| ||| ||||||||| ||||  |||||||| ||||| | ||||||  | |||| ||||||||||||||||||||    
T  3736424 gtcatcttacgttattcttagcatgttttttagtctatttcagtaggttttaccagcaaagcataggattattagatcaattgcctatg 3736336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 5485685 - 5485633
Alignment:
Q  188 ttttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||||||| ||||    
T  5485685 ttttcagtaggttttacaagcagaatagaggagtattagatcaattgcttatg 5485633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 8052429 - 8052525
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||  |||||||| |||||| ||| |||||||| ||||||||||||||| |||||   |||||||  |||||||||||||   ||||||||||    
T  8052429 tgatgacaaatcatcttacgttattcttagcatgtttt-cagtcattttcagtaggttttagcagcaaaaatgaggagtattagaatgattgcctatg 8052525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 39270273 - 39270365
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcc 236  Q
    |||||||||||||||||| ||||| || | ||||||||||||||||||| |||| |||||   || ||||  ||||||||||||| | ||||||    
T  39270273 tgatgacatgtcatcttacgttatctt-agcatgtttttcagtcatttttagtaagttttagcagtaaaaaggaggagtattagaacgattgcc 39270365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 1254696 - 1254747
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagt 195  Q
    |||||||| ||||||||| |||||||| | |||||||||||||||||||||||    
T  1254696 tgatgacaagtcatcttacgttatttt-agcatgtttttcagtcattttcagt 1254747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 15611070 - 15611129
Alignment:
Q  173 catgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaatt 233  Q
    ||||||||||| ||||||| |||| ||||| |||||| |||||||||||||||||| ||||    
T  15611070 catgtttttcattcatttt-agtaggtttttcaagcagaatagaggagtattagataaatt 15611129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 1586286 - 1586191
Alignment:
Q  145 atgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||| |||||||| || |||||| ||| |||||||| ||||| ||  ||||| ||| | | ||||||||||||||| |||||| |||||| |||||    
T  1586286 atgatatgtcatcctacgttattcttagcatgttttccagtctttaccagtaggttataccagcaaaatagaggagcattagagcaattgtctatg 1586191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 9078881 - 9078940
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatg-tttttcagtcattttcagtatgttt 201  Q
    |||||||||||||||||| |||||| ||| |||| ||||||||| |||||||||| ||||    
T  9078881 tgatgacatgtcatcttacgttattcttagcatgttttttcagttattttcagtaggttt 9078940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 13280856 - 13280797
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    |||||||||||||||||| |||||| ||| ||||||||||| | | |||||||| |||||    
T  13280856 tgatgacatgtcatcttacgttattcttagcatgtttttcaattaatttcagtaggtttt 13280797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 17887728 - 17887826
Alignment:
Q  141 tttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||| |||||| || |||||| ||| ||| ||||||||||||||| |||  |||||| |  ||| |||||||||| |||||  |||||||||||    
T  17887728 tttgatgacaggtcatcctacgttattcttagcatatttttcagtcatttttagttagttttg-atccaagatagaggagttttagagaaattgcctatg 17887826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 21502917 - 21502854
Alignment:
Q  177 tttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| |||||||| |||| ||||| | ||| ||| |||||||||||||| ||||||||||||    
T  21502917 tttttcggtcatttttagtaggttttacgagctaaacagaggagtattagaacaattgcctatg 21502854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 5220967 - 5221065
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttc-agtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||| ||| |||||||||| ||| |||||  ||||| ||| ||||  |||| |||||| |||||||||||| |||| ||||||| ||||    
T  5220967 tgatgacaggtcattttacgttatttttagcatatttttttagtcaatttgagtagattttacaagcagaatagaggagtactagaacaattgcttatg 5221065  T

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Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 13287710 - 13287752
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagt 185  Q
    |||||||| ||||||||| |||||| |||||||||||||||||    
T  13287710 tgatgacaagtcatcttacgttattcttaacatgtttttcagt 13287752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 17974510 - 17974464
Alignment:
Q  145 atgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    |||||| |||| ||||||||||||||||||| ||||||||| |||||    
T  17974510 atgacaagtcaccttatgttatttttaacatatttttcagttatttt 17974464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 17981166 - 17981120
Alignment:
Q  145 atgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    |||||| |||| ||||||||||||||||||| ||||||||| |||||    
T  17981166 atgacaagtcaccttatgttatttttaacatatttttcagttatttt 17981120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 9722538 - 9722485
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagta 196  Q
    ||||||||  |||||||| |||||| ||| ||||||||||| ||||||||||||    
T  9722538 tgatgacaaatcatcttacgttattattagcatgtttttcaatcattttcagta 9722485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 4988249 - 4988217
Alignment:
Q  208 caaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||| ||||||||||||||    
T  4988249 caaaatagaggagtattatatcaattgcctatg 4988217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 240
Target Start/End: Complemental strand, 4992347 - 4992315
Alignment:
Q  208 caaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||| ||||||||||||||    
T  4992347 caaaatagaggagtattatatcaattgcctatg 4992315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 21234180 - 21234116
Alignment:
Q  163 ttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    ||||||||| |||||| |||||||||||| | || ||||| | |||| || ||||||||||||||    
T  21234180 ttatttttagcatgttattcagtcatttttaataggttttaccagcataacagaggagtattaga 21234116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 22470401 - 22470499
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||| | ||||||| |||||||| ||||| ||||||| ||||    
T  22470401 ttgatgacatgtcatcttacgttattcttagcatgtttttcagtcattttcagtatgttttaccagcaaaacagaggagtgttagagcaattgcatatg 22470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 7805839 - 7805749
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaatt 233  Q
    |||||||| ||||||||| |||||| ||| ||||||||||| |||||||||||||||||| ||  |||||||||||||||||||| |||||    
T  7805839 tgatgacaggtcatcttacgttattcttagcatgtttttcaatcattttcagtatgttttacatccaaaatagaggagtattagagcaatt 7805749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 22247090 - 22246997
Alignment:
Q  146 tgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||||||||| |||||| ||| ||| |||||||||||||||||||| ||||| | |||||||||||||||||||||| |||||| |||||    
T  22247090 tgacatgtcatcttacgttattcttagcat-tttttcagtcattttcagtaggttttaccagcaaaatagaggagtattagagcaattgactatg 22246997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 819846 - 819943
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| | ||||||||| |||||| ||| ||||||||||||||| |||||||| ||||| |||||| |||||||||||||||||||| |||| ||||    
T  819846 tgatgataggtcatcttacgttattcttagcatgtttttcagtcaatttcagtaggttttacaagcataatagaggagtattagatcatttgcttatg 819943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 18535869 - 18535770
Alignment:
Q  141 tttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||| ||||||||| |||||| ||| ||||||||||||||| ||| |||| ||||| | ||||||  |||||||||||||||||||||| ||||    
T  18535869 tttgatgacaagtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaagcagaggagtattagatcaattgcttatg 18535770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 19387871 - 19387937
Alignment:
Q  155 atcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagt 221  Q
    ||||||||||||||||| | |||||||||||||||||||||| ||||| | ||||||||||||||||    
T  19387871 atcttatgttatttttagcttgtttttcagtcattttcagtaggttttaccagcaaaatagaggagt 19387937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 19912679 - 19912593
Alignment:
Q  141 tttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    |||||||||| ||||||||| |||||| ||| ||| |||||||||||||||||||| |||||   ||||||| ||||||||||||||    
T  19912679 tttgatgacaggtcatcttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaaagaggagtattaga 19912593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 17135162 - 17135092
Alignment:
Q  170 taacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||||||| |||| ||||| | |||||||||||||||||||| || ||||| |||||    
T  17135162 taacatgtttttcagtcatttttagtaggttttactagcaaaatagaggagtattatattaattgtctatg 17135092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 12517387 - 12517290
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| |||||| ||| ||| |||||||||||||||||||| |||||   |||||||  |||||||||||||   ||||||||||    
T  12517387 tgatgacaggtcatcttacgttattcttagcatctttttcagtcattttcagtaggttttagtagcaaaaaggaggagtattagaatgattgcctatg 12517290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 3114706 - 3114806
Alignment:
Q  140 atttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    |||||||| || ||||| | | |||||| ||| |||||||||||||| ||| ||||| ||||| | ||||||| ||||||||||||||  ||||||||||    
T  3114706 atttgatggcaggtcatgtgacgttattcttagcatgtttttcagtcttttacagtaggttttaccagcaaaacagaggagtattagagtaattgcctat 3114805  T
Q  240 g 240  Q
    |    
T  3114806 g 3114806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 13906602 - 13906680
Alignment:
Q  162 gttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| ||| |||||||||| |||| ||| |||| |||||||||| | ||| ||||||||||||||||||||| ||||    
T  13906602 gttattcttagcatgtttttctgtcaattttagtaggttttgcaagtataatggaggagtattagatcaattgcttatg 13906680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 6076070 - 6075985
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    ||||||| ||||||| ||| |||||| || ||| |||||||||||| |||||||| ||||  |||||| || ||||||||||||||    
T  6076070 ttgatgatatgtcatattacgttattctttacacgtttttcagtcaatttcagtaggtttaacaagcacaaaagaggagtattaga 6075985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 18457111 - 18457208
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| | |||| |||  ||||| |||||| |||||||||| |||||   |||||||  ||||||||||||| ||||||||||||    
T  18457111 tgatgacaggtcatcttacgctattcttaggatgttattcagttattttcagtaggttttagcagcaaaaaggaggagtattagaacaattgcctatg 18457208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 20891645 - 20891742
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| || ||||||||| |||||| ||| ||| |||||||||| ||||||||| ||||| | | ||||| | |||| ||||| ||||||||||||||    
T  20891645 tgatggcaggtcatcttacgttattcttagcatatttttcagtcgttttcagtaggttttaccaacaaaacataggaatattatatcaattgcctatg 20891742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 27852603 - 27852700
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||| ||||| |||||||||| ||||| ||| |||||||||||||| ||||| ||  || |||| ||||||| |||| || |||| ||||    
T  27852603 tgatgacatgtcgtcttacgttatttttagcatgtcttttagtcattttcagtaggttttacatccagaataaaggagtaatagagcagttgcatatg 27852700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 34276437 - 34276534
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||| ||| |||||| ||| ||| |||||||||||||||||||| |||||   |||||||  ||||||||||| | | ||||||||||    
T  34276437 tgatgacaggtcattttacgttattcttagcatatttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattataacgattgcctatg 34276534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 2508718 - 2508778
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    |||||| |||||||||||| |||||| |||  ||||||||||||||||||||||| |||||    
T  2508718 ttgatggcatgtcatcttacgttattcttagtatgtttttcagtcattttcagtaagtttt 2508778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 3429225 - 3429321
Alignment:
Q  144 gatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||||||||||| |||||| ||| ||||||||||| ||  ||| |||| ||||| | ||||||  ||||||||||||||  |||||| ||||    
T  3429225 gatgacatgtcatcttacgttattcttatcatgtttttcattctattttagtaggttttaccagcaaaccagaggagtattagaggaattgcatatg 3429321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 52935533 - 52935617
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    |||||| | ||||||||| |||||| ||| ||||||||||| |||||||||||| ||||| | ||||||| ||| || |||||||    
T  52935533 tgatgataggtcatcttacgttattcttagcatgtttttcaatcattttcagtaggttttaccagcaaaacagatgaatattaga 52935617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 12771211 - 12771286
Alignment:
Q  152 gtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    ||||||||| |||||| ||| ||||||||||||||||||||||||| ||||   |||||||  || ||||||||||    
T  12771211 gtcatcttacgttattcttagcatgtttttcagtcattttcagtatattttagcagcaaaaatgatgagtattaga 12771286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 20886966 - 20886883
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtatta 225  Q
    ||||||||| ||||||||| |||||| ||| ||||||||||| || |||||| || ||||| ||  || |||||||||||||||    
T  20886966 ttgatgacaggtcatcttacgttattcttagcatgtttttcaatcgttttcaataggttttacatccagaatagaggagtatta 20886883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 8115305 - 8115391
Alignment:
Q  154 catcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||| |||||||||| |||||||| |||| ||||| |||| |||||   |||||||  ||||||||||||| | ||||||||||    
T  8115305 catcttacgttatttttagcatgttttccagttattttgagtaggttttagtagcaaaaaggaggagtattagaacgattgcctatg 8115391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 8145342 - 8145248
Alignment:
Q  146 tgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| |||||||||  ||||| ||| ||||||||||| ||| |||||||| |||||   |||||||  ||||||||||| | ||||||||||||    
T  8145342 tgacaggtcatcttacattattcttagcatgtttttcaatcaatttcagtaggttttagcagcaaaaatgaggagtattaaaacaattgcctatg 8145248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 31283903 - 31284000
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||| | |||||| ||| ||||||||||| ||||||| |||| ||||| | | |||  |||| |||||||||| ||||||| ||||    
T  31283903 tgatgacaggtcatctaacgttattcttatcatgtttttcaatcattttaagtaggttttaccaacaatgtagaagagtattagagcaattgcttatg 31284000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 8995034 - 8995082
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    |||||| ||||||||||| |||||||| |||||||||||| ||||||||    
T  8995034 tgatgatatgtcatcttacgttattttcaacatgtttttcggtcatttt 8995082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 8765761 - 8765674
Alignment:
Q  153 tcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| || |||||| ||| ||||||||||||||||||||| || |||||    |||||| |||||||||||||| | ||| ||||||    
T  8765761 tcatcctacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattagaacgatttcctatg 8765674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 8770651 - 8770564
Alignment:
Q  153 tcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| || |||||| ||| ||||||||||||||||||||| || |||||    |||||| |||||||||||||| | ||| ||||||    
T  8770651 tcatcctacgttattcttagcatgtttttcagtcattttcaataggttttagctgcaaaaaagaggagtattagaacgatttcctatg 8770564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 19573575 - 19573614
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgttttt 181  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  19573575 ttgatgacaggtcatcttatgttatttttagcatgttttt 19573614  T

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Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 24516638 - 24516595
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagt 185  Q
    |||||||||||||| ||||||||||| ||| |||||||||||||    
T  24516638 ttgatgacatgtcaccttatgttattcttagcatgtttttcagt 24516595  T

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Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 27412658 - 27412700
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagt 185  Q
    |||||||| ||||||||| |||||||||| |||||||||||||    
T  27412658 tgatgacaagtcatcttacgttatttttagcatgtttttcagt 27412700  T

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Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 1725947 - 1725996
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    ||||||||||||||||||| | |||||| ||||| ||||||| |||||||    
T  1725947 ttgatgacatgtcatcttacgatattttcaacatatttttcaatcatttt 1725996  T

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Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 25850952 - 25851001
Alignment:
Q  147 gacatgtcatcttatgttatttttaacatgtttttcagtcattttcagta 196  Q
    |||| |||||||||||||||| ||| ||||||||||||| ||||| ||||    
T  25850952 gacaggtcatcttatgttattcttagcatgtttttcagttatttttagta 25851001  T

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Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 12372344 - 12372416
Alignment:
Q  155 atcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    |||||| || ||| ||| ||| ||||||| |||||||||||| ||||| | |||||||  |||||||||||||    
T  12372344 atcttacgtaattcttagcatttttttcaatcattttcagtaggttttacgagcaaaaaggaggagtattaga 12372416  T

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Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 51118481 - 51118529
Alignment:
Q  144 gatgacatgtcatcttatgttatttttaacat-gtttttcagtcatttt 191  Q
    ||||||||||||||||| |||||||||| |||  |||||||||||||||    
T  51118481 gatgacatgtcatcttacgttatttttagcatattttttcagtcatttt 51118529  T

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Target: chr2 (Bit Score: 62; Significance: 7e-27; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 17891828 - 17891731
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||| | ||||||| ||||||||||||||  |||| ||||||    
T  17891828 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttaccagcaaaacagaggagtattagagtaatttcctatg 17891731  T

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Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 35680100 - 35680197
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| | ||||||| |||||| ||| ||||||||| |||||||||||||| ||||| | ||||||| |||||||||||||| |||||| |||||    
T  35680100 tgatgacaggccatcttacgttattcttagcatgtttttaagtcattttcagtaggttttaccagcaaaacagaggagtattagagcaattgtctatg 35680197  T

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Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 21905826 - 21905739
Alignment:
Q  140 atttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||||||||||| |||||||||   || ||||  |||||||||||||    
T  21905826 atttgatgacaggtcatcttatgttattcttagcatgtttttcagtcattttctgtatgttttagcaggaaaaaggaggagtattaga 21905739  T

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Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 16157083 - 16157181
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| |||||||||  ||||| ||| |||||||||||||||||||||||| ||||| ||  || | ||||||||||||||| ||||||| ||||    
T  16157083 ttgatgacaggtcatcttacattattcttagcatgtttttcagtcattttcagtaggtttttcatccacactagaggagtattagaacaattgcttatg 16157181  T

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Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 22627481 - 22627384
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| ||||||||| ||||||| |||||| ||||||||| |||||||||||||| ||||| | ||||||||| ||||||||||||  ||||| |||||    
T  22627481 ttgataacatgtcattttatgtt-tttttagcatgttttttagtcattttcagtaggttttaccagcaaaatataggagtattagagaaattgtctatg 22627384  T

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Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 26651636 - 26651734
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| ||| |||||||||  ||||||||||||||||||| |||||||||||||| ||||  |||| | |||||| |||||||||| ||||||| ||||    
T  26651636 ttgattacaagtcatcttacattatttttaacatgtttttgagtcattttcagtaggtttcacaagtagaatagatgagtattagagcaattgcttatg 26651734  T

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Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 23010041 - 23010137
Alignment:
Q  141 tttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcct 237  Q
    |||||| ||| ||||||||| |||||| ||| ||||||||||||||||||||| || ||||| | |||||||   |||||||||||||||| |||||    
T  23010041 tttgataacaagtcatcttacgttattcttagcatgtttttcagtcattttcaataggttttaccagcaaaacgaaggagtattagatcaactgcct 23010137  T

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Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 17351075 - 17350978
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt-gcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| |||||| ||||||| ||||||||| |||||||||| ||||| ||||  ||||| ||||||||||||| |||||| |||||    
T  17351075 tgatgacaagtcatcttacgttattcttaacatatttttcagttattttcagtaggttttagcaacaaaaat-gaggagtattagaacaattgtctatg 17350978  T

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Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 25196708 - 25196666
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagt 185  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  25196708 tgatgacatgtcatcttatgttattcttaacatgtttttcagt 25196666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 28918285 - 28918188
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt-gcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||  |||| ||| |||||| ||| |||||||||||||||||||||||| ||||| || | |||||  ||||||||||||| ||||||||||||    
T  28918285 tgatgacaaatcattttacgttattcttagcatgtttttcagtcattttcagtaggttttagcta-caaaaaggaggagtattagaacaattgcctatg 28918188  T

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Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 32438678 - 32438776
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaa-catgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    |||||||||||| |||||| ||||||||||| ||||||||||| ||||||| |||  ||||| ||  || ||||||||||||||| | |||||| ||||    
T  32438678 ttgatgacatgttatcttacgttatttttaaacatgtttttcattcattttaagttagtttttcatccagaatagaggagtattataacaattgtctat 32438776  T

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Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 16257957 - 16257860
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||| ||| |||||||||||||||| |||||||||||||||||| |||| ||||  |||| | |||||||  ||| |||||||||  ||||| |||||    
T  16257957 tgatcacaggtcatcttatgttattcttaacatgtttttcagtcgtttttagtagattttaccagcaaaaccgagaagtattagagaaattgtctatg 16257860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 240
Target Start/End: Complemental strand, 28930371 - 28930274
Alignment:
Q  144 gatgacatgtcatcttatgttatttttaacatgttttt-cagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||| || |||||| ||||| |||| ||||||||| |||||||||||||||||||||    ||||||  ||||| ||||||| ||||||||||||    
T  28930371 gatgacaggtaatcttacgttatgtttagcatgttttttcagtcattttcagtatgttttagctgcaaaaatgaggaatattagaacaattgcctatg 28930274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 32137911 - 32137995
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattag 226  Q
    ||||||||| ||||||||| |||||| |||  |||||| ||||||||||| |||| ||||| ||  || ||||||||||||||||    
T  32137911 ttgatgacaggtcatcttacgttattcttattatgtttatcagtcatttttagtaggttttacatccagaatagaggagtattag 32137995  T

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Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 22569142 - 22569092
Alignment:
Q  152 gtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||| |||||    
T  22569142 gtcatcttatgttattcttaccatgtttttcagtcaatttcagtaggtttt 22569092  T

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Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 25882581 - 25882639
Alignment:
Q  154 catcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaa 212  Q
    ||||||| |||||||||| ||||||||||||||| ||| |||| ||||||| |||||||    
T  25882581 catcttacgttatttttagcatgtttttcagtcaattttagtaggttttgccagcaaaa 25882639  T

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Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 29717369 - 29717455
Alignment:
Q  155 atcttatgttatttttaacatgtttttcagtca-ttttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| |||||| ||| ||||||||||| ||| ||||||||| ||||| |||| | |||| |||||||||| ||||||||| ||||    
T  29717369 atcttaggttattcttagcatgtttttcaatcatttttcagtaggttttacaagaagaataaaggagtattatatcaattgcttatg 29717455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 29892286 - 29892228
Alignment:
Q  144 gatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    ||||||||||||||||| |||||| ||||||| ||||||||| ||||||| || |||||    
T  29892286 gatgacatgtcatcttacgttattcttaacatatttttcagttattttcaataggtttt 29892228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 18758386 - 18758301
Alignment:
Q  155 atcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| |||||||||| ||||||||| | | |||||||||| |||||   |||||||  ||||||||||||| | ||||||||||    
T  18758386 atcttacgttatttttagcatgttttttaattattttcagtaggttttagtagcaaaaaggaggagtattagaacgattgcctatg 18758301  T

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Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 18970775 - 18970865
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgc 235  Q
    |||||||||||||||||| |||||| ||  ||  |||||||| ||||||||||| ||||| ||   | ||||||||||||||||| |||||||    
T  18970775 tgatgacatgtcatcttacgttattctttgca--tttttcaggcattttcagtaggttttacatctagaatagaggagtattagagcaattgc 18970865  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 32087145 - 32087048
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||| |||||| ||| ||| ||||| ||||  ||| |||| ||||| | | |||| ||  |||||||||||||||||| |||||    
T  32087145 tgatgacatgtcatcttacgttattattagcatattttttagtctattttagtaggttttactatcaaagtatcggagtattagatcaattgtctatg 32087048  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 32130698 - 32130782
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattag 226  Q
    ||||||||| ||||||||| |||||| |||  |||||| ||||||||||| |||| ||||| ||  || ||||||| ||||||||    
T  32130698 ttgatgacaggtcatcttacgttattcttagtatgtttatcagtcatttttagtaagttttacatccagaatagagaagtattag 32130782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 181
Target Start/End: Original strand, 8445462 - 8445500
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgttttt 181  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  8445462 tgatgacatgtcatcttatgttattcttaacatattttt 8445500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 18458366 - 18458448
Alignment:
Q  145 atgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    |||||| |||||| || |||||| ||||||||||||||||||  ||| ||||  |||| | ||||||  ||||||||||||||    
T  18458366 atgacaggtcatcataagttattattaacatgtttttcagtctattttagtagtttttactagcaaaccagaggagtattaga 18458448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 27421153 - 27421071
Alignment:
Q  158 ttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||| ||| ||| ||| ||||||||||||| || | ||| |||||| |||| |||| ||||||||||| ||| ||||    
T  27421153 ttatgttattcttagcatatttatcagtcattttcactaggatttacaagcagaataaaggaatattagatcaactgcttatg 27421071  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 18120546 - 18120587
Alignment:
Q  144 gatgacatgtcatcttatgttatttttaacatgtttttcagt 185  Q
    ||||||||||||||||| |||||| ||| |||||||||||||    
T  18120546 gatgacatgtcatcttacgttattcttagcatgtttttcagt 18120587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 23861183 - 23861134
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    ||||| ||||||||||||| |||||||||| ||| | |||||||||||||    
T  23861183 ttgatcacatgtcatcttacgttatttttagcatatatttcagtcatttt 23861134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 42153732 - 42153683
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    |||||||||  |||||||  |||||||||||||| |||||||||||||||    
T  42153732 ttgatgacagatcatcttccgttatttttaacatatttttcagtcatttt 42153683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 11464323 - 11464407
Alignment:
Q  148 acatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaat 232  Q
    ||||| |||||||||||||| ||| ||||||||  ||||  ||| |||| ||||||  || |||  |||||||||||||||||||    
T  11464323 acatgccatcttatgttattcttagcatgttttcaagtctattttagtaggttttgtcagtaaagcagaggagtattagatcaat 11464407  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 32139333 - 32139417
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattag 226  Q
    ||||||||| ||||||||| |||||| |||  |||||| ||||||||||| || | ||||| ||   | ||||||||||||||||    
T  32139333 ttgatgacaggtcatcttacgttattcttagtatgtttatcagtcatttttagcaggttttacatctagaatagaggagtattag 32139417  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 34369420 - 34369372
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    ||||||||  ||||||||||||||| ||| ||||||||||||| |||||    
T  34369420 tgatgacagatcatcttatgttattcttagcatgtttttcagttatttt 34369372  T

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Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 4007150 - 4007242
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattg 234  Q
    ||||||||| |||||||||||||| | ||| ||||||||||||||||||| |||| ||||  | |||||||||||||||||||||||||||||    
T  4007150 ttgatgacaggtcatcttatgttaatattagcatgtttttcagtcatttttagtaggtttcaccagcaaaatagaggagtattagatcaattg 4007242  T

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Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 13313271 - 13313368
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||| ||||| |||||| ||| ||||||||||||||||||||| || |||||   |||||||  ||||||||||||| ||||||||||||    
T  13313271 tgatgacatgtcgtcttacgttattcttagcatgtttttcagtcattttcaataggttttagcagcaaaaaggaggagtattagaacaattgcctatg 13313368  T

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Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 24380353 - 24380450
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||| ||||||||||||| |||||| ||| ||||||||||| ||| |||||||| ||||| | |||| || |||||||||||||| ||||||||||||    
T  24380353 tgataacatgtcatcttacgttattcttagcatgtttttcactcaatttcagtaggttttaccagcagaacagaggagtattagaacaattgcctatg 24380450  T

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Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 232
Target Start/End: Complemental strand, 17650059 - 17649969
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaat 232  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||| ||||||||  ||||| ||  || ||||||||||||||||| ||||    
T  17650059 ttgatgacaagtcatcttacgttattcttaacatgtttttcagtcgttttcagttagtttttcatccagaatagaggagtattagagcaat 17649969  T

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Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 37527026 - 37527123
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| ||||||||  ||||||||||||| ||||||||||  ||| |||| ||||| | |||||| |||| |||||||||| ||||||||||||    
T  37527026 tgatgacatatcatcttaccttatttttaacatttttttcagtctattttagtaggttttaccagcaaactagatgagtattagagcaattgcctatg 37527123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 25180721 - 25180818
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtc-attttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||| |||||  |||||||||||||||||| || ||| ||| ||||| | || |||  |||||||||||||||||||||||||||    
T  25180721 tgatgacatgtcatcttacgttatccttaacatgtttttcagtctatgttc-gtaggttttaccaggaaaccagaggagtattagatcaattgcctatg 25180818  T

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Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 13833603 - 13833700
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| || |||||| |||||| ||  |||||||||||||||||||||||||| ||| ||  || ||||| ||||||||||| ||||||| ||||    
T  13833603 tgatgacaagtaatcttacgttattctttgcatgtttttcagtcattttcagtatgcttttcatccataatagtggagtattagagcaattgcttatg 13833700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 14271938 - 14271841
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| |||||| ||| |||||||||||  | ||||||||| ||||| | ||||||| | ||||||||||||  |||||||||||    
T  14271938 tgatgacaggtcatcttacgttattcttagcatgtttttcaacctttttcagtaggttttactagcaaaacaaaggagtattagagtaattgcctatg 14271841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 19705083 - 19704986
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||| |||||| |||  ||||||||||||||||||||||| |||||   |||| ||   |||||||||||| | ||||||||||    
T  19705083 tgatgacatgtcatcttacgttattcttagtatgtttttcagtcattttcagtaggttttaacagcataaagaaggagtattagaacgattgcctatg 19704986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 22501930 - 22501833
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| |||||||| |||||| ||| ||||||||||| || ||||||||  ||||| | ||||||| ||||||||||||||  ||| |||||||    
T  22501930 tgatgacatatcatcttacgttattcttatcatgtttttcaatctttttcagttggttttaccagcaaaacagaggagtattagagtaatcgcctatg 22501833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 21695413 - 21695473
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttg 203  Q
    |||||||||||||||||| |||||| ||| ||||||||||||||| |||||||| ||||||    
T  21695413 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcaatttcagtaggttttg 21695473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 14077216 - 14077122
Alignment:
Q  145 atgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| ||||||||| ||| || ||||||||||||| ||||||||| |||| ||||| ||  || || |||||||||||||||||||||| ||||    
T  14077216 atgacaagtcatcttacgttcttcttaacatgttttttagtcatttt-agtaggttttacatccagaaaagaggagtattagatcaattgcttatg 14077122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 24583173 - 24583268
Alignment:
Q  145 atgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| ||||| |||||||||| ||| ||||||||||||||||||| ||||  ||||   |||||||  ||||||||||||| | ||||||||||    
T  24583173 atgacaggtcattttatgttattcttagcatgtttttcagtcatttttagtagattttagcagcaaaaaggaggagtattagaacgattgcctatg 24583268  T

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Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 24909001 - 24908911
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaatt 233  Q
    |||||||| ||||  ||| |||||||||| ||||||||||| ||| ||||| || ||||| |||||| ||| ||||| |||||||||||||    
T  24909001 tgatgacaggtcaaattacgttatttttagcatgtttttcaatcaatttcaataggttttacaagcagaatggaggaatattagatcaatt 24908911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 24911222 - 24911132
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaatt 233  Q
    |||||||| ||||  ||| |||||||||| ||||||||||| ||| ||||| || ||||| |||||| ||| ||||| |||||||||||||    
T  24911222 tgatgacaggtcaaattacgttatttttagcatgtttttcaatcaatttcaataggttttacaagcagaatggaggaatattagatcaatt 24911132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 30117661 - 30117755
Alignment:
Q  146 tgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| || |||||| |||||||||| ||||||||||| |||||||||||| ||||| | ||||||| | |||| |||||||  ||||| |||||    
T  30117661 tgacaggttatcttacgttatttttagcatgtttttcattcattttcagtaggttttaccagcaaaacataggaatattagagaaattgtctatg 30117755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 20400431 - 20400334
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| |||||| ||| |||| ||||||||||||||||||  |||||   |||||||  ||||||||||||| | ||| ||||||    
T  20400431 tgatgacaggtcatcttacgttattcttagcatgcttttcagtcattttcagtgggttttagcagcaaaaaggaggagtattagaacgatttcctatg 20400334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 5152016 - 5151964
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagt 195  Q
    |||||||| ||||||||| |||||| ||||||||||||||||| |||||||||    
T  5152016 tgatgacaagtcatcttacgttattcttaacatgtttttcagtaattttcagt 5151964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 6886767 - 6886668
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcag--tcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| |||||| ||| ||||||||||||  |  |||| |||| ||||| | | ||||||||||||||||||||  |||||||||||    
T  6886767 tgatgacaagtcatcttacgttattcttagcatgtttttcagacttttttttagtaggttttaccatcaaaatagaggagtattagagtaattgcctatg 6886668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 240
Target Start/End: Complemental strand, 7985208 - 7985117
Alignment:
Q  148 acatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| ||| |||||| ||||||||| |||||||||  || |||| ||||| | ||||||| |||||||||||| |||||||| |||||    
T  7985208 acatgtcat-ttacgttattcttaacatgtatttcagtcaaatttagtaggttttaccagcaaaacagaggagtattaaatcaattgtctatg 7985117  T

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Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 19784781 - 19784876
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    |||||||| | ||||||| ||| ||||||  || |||||||||| |||| |||| || || |||||||||||||||||||| ||| |||||||||||    
T  19784781 tgatgacaggccatcttacgttctttttagtat-tttttcagtcgtttttagtaggtgttacaagcaaaatagaggagtataagagcaattgcctat 19784876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 28858935 - 28858837
Alignment:
Q  140 atttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    ||||||||||| | |||||||  ||||| ||| |||||||| |||||||||| |||| ||||| |||||| ||||||||| ||||| ||||||||| |||    
T  28858935 atttgatgacaggccatcttacattattcttagcatgtttt-cagtcatttttagtaggttttacaagcagaatagagga-tattatatcaattgcttat 28858838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 24381325 - 24381423
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttt-tcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| |||||| ||| |||||||| ||||||| |||||| | ||||| | |||| || |||||||||||  | ||||||||||||    
T  24381325 tgatgacaggtcatcttaagttattcttagcatgttttttcagtcaatttcagcaggttttaccagcagaacagaggagtattttaacaattgcctatg 24381423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 12342890 - 12342982
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgc 235  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||  ||| |||| ||||| | | | ||| | |||||||||||| |||||||    
T  12342890 ttgatgacatgtcatcttacgttattcttaacttgtttttcagtctattttagtaggttttaccaac-aaacaaaggagtattagagcaattgc 12342982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 17511001 - 17510904
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| | |||||||||  ||||| ||| ||||||||||||||| |||||||| |||||    ||||||  ||||||||||||| | ||||||||||    
T  17511001 tgatgataggtcatcttacattattcttagcatgtttttcagtcactttcagtaggttttagctgcaaaaaggaggagtattagaacgattgcctatg 17510904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 17835631 - 17835550
Alignment:
Q  152 gtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaatt 233  Q
    ||||||||| |||||| |||  || ||||||||| | |||||||| ||||| |||||| ||||| ||||||||||| |||||    
T  17835631 gtcatcttacgttattcttagtatatttttcagttaatttcagtaggttttacaagcagaatagtggagtattagaacaatt 17835550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 18446859 - 18446956
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| | ||||||||| |||||||||| ||||||||||||| |||| ||||| | |||   |||||||  ||||||||||||| | ||| ||||||    
T  18446859 tgatgataggtcatcttacgttatttttaccatgtttttcagttatttccagtaggatttagcagcaaaaaggaggagtattagaaccatttcctatg 18446956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 24389853 - 24389757
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt-gcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    |||||||| ||||||||| |||||| |||  | |||||| ||| |||||||||| ||||| ||||  ||||| ||||||||||||| |||||||||||    
T  24389853 tgatgacaggtcatcttacgttattcttagtaagttttttagttattttcagtaggttttagcaacaaaaat-gaggagtattagaacaattgcctat 24389757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 5856841 - 5856785
Alignment:
Q  178 ttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattg 234  Q
    |||| ||||||||| |||| ||||| ||||| |||||||||| ||||||||||||||    
T  5856841 tttttagtcatttttagtaggttttacaagctaaatagaggaatattagatcaattg 5856785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 15176441 - 15176529
Alignment:
Q  152 gtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||  ||||| ||| ||||| ||||||||| |||||||| |||||   |||||||  ||||||||||||| | ||||||||||    
T  15176441 gtcatcttacattattcttagcatgtgtttcagtcaatttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatg 15176529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 11222388 - 11222342
Alignment:
Q  145 atgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    ||||||||||||||||  ||||||| ||||| |||||||||||||||    
T  11222388 atgacatgtcatcttacattattttcaacatatttttcagtcatttt 11222342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 17976319 - 17976278
Alignment:
Q  152 gtcatcttatgttatttttaacatgtttttcagtcattttca 193  Q
    ||||||||| |||||||||| ||||||||| |||||||||||    
T  17976319 gtcatcttacgttatttttagcatgttttttagtcattttca 17976278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 18007620 - 18007536
Alignment:
Q  155 atcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| |||||| ||| ||| |||||||||||||||||||| ||||| | | |||||| | ||| ||||||| |||||| |||||    
T  18007620 atcttacgttattgttagcat-tttttcagtcattttcagtaggttttaccaacaaaatggtggaatattagaacaattgtctatg 18007536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 23867829 - 23867926
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| || ||| |||  ||||||||||| |||||| |||| |||||   ||||||   ||||||||||||| | ||||||||||    
T  23867829 tgatgacaggtcatcttacgtaattcttagtatgtttttcaggcatttttagtaggttttagcagcaaagacgaggagtattagaacgattgcctatg 23867926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 15557461 - 15557405
Alignment:
Q  146 tgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    |||||||||||||||  ||||| |||   |||||||||||||||||||||| |||||    
T  15557461 tgacatgtcatcttacattattcttagtctgtttttcagtcattttcagtaggtttt 15557405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 28621702 - 28621642
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    ||||||||| ||||||| | |||||| ||| ||||||||||||| ||||||| || |||||    
T  28621702 ttgatgacaggtcatctaacgttattcttagcatgtttttcagttattttcattaggtttt 28621642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 16363710 - 16363623
Alignment:
Q  153 tcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| |||||||||| |||||||| |||||||||||||||  |||| | | |||||||||||||||||||||||||||||||||    
T  16363710 tcatcttacgttatttttagcatgttttccagtcattttcagtagtttttaccaacaaaatagaggagtattagatcaattgcctatg 16363623  T

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Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 15542308 - 15542405
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||   |||||||   |||||||||||| | ||||||||||    
T  15542308 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttcagtaggttttagcagcaaaaagtaggagtattagaacgattgcctatg 15542405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 15571698 - 15571785
Alignment:
Q  153 tcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| |||||||||| ||||||||||||||| ||| |||| ||||| | ||||||  ||||||||||||||||||||| |||||    
T  15571698 tcatcttacgttatttttagcatgtttttcagtcaattttagtaggttttactagcaaagcagaggagtattagatcaattgtctatg 15571785  T

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Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 24901307 - 24901214
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgc 235  Q
    ||||| ||| ||||||||| |||||||||| ||| ||||||| ||||||||||||  |||| | ||||||| |||| |||||||||||||||||    
T  24901307 ttgattacaagtcatcttacgttatttttagcatatttttcaatcattttcagtagattttaccagcaaaacagagaagtattagatcaattgc 24901214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 17445144 - 17445066
Alignment:
Q  162 gttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| ||||||||||||||||| ||||| |||| ||||| |||||| |||||| ||| |||||||||||||| ||||    
T  17445144 gttattcttaacatgtttttcagttatttttagtaggttttacaagcataatagatgagcattagatcaattgcttatg 17445066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 21663089 - 21663187
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| ||||||||| |||||| ||| |||||||||||||||||||||||| |||||   | |||||  ||| ||||||||| | ||||||||||    
T  21663089 ttgatgacaggtcatcttacgttattcttagcatgtttttcagtcattttcagtaggttttaacatcaaaaaggagaagtattagaacgattgcctatg 21663187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 27912161 - 27912064
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||   | |  |||  |  |||||||||||||||||||| |||||| |||||    
T  27912161 tgatgacatgtcatcttacgttattcttaacatgtttttcagtcattttttatttagttttaatccaaaatagaggagtattagaacaattgtctatg 27912064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 24464711 - 24464619
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgc 235  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||| ||  | ||||| ||   | ||||||||||||||||| |||||||    
T  24464711 tgatgacatgtcatcttacgttattcttagcatgtttttcagtcatttccaacaggtttttcatctagaatagaggagtattagagcaattgc 24464619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 7221614 - 7221563
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttca 193  Q
    ||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  7221614 ttgataacatgtcatcttacgttattcttaacatgtttttcagtcattttca 7221563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 14235283 - 14235381
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| |||||||||||| |||| | ||| ||||||||||||||||||| |||| ||||| ||  || ||| | ||||||||||| ||||||| ||||    
T  14235283 ttgatggcatgtcatcttacgttactcttagcatgtttttcagtcatttttagtaggtttttcatccagaatggtggagtattagaccaattgcttatg 14235381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 22621891 - 22621794
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| || |||||| || ||| ||| ||||||||||||||||||| |||| | ||| | ||||||  ||||||| |||||||||||||||||||    
T  22621891 ttgatgacaggttatcttacgtaattcttagcatgtttttcagtcatttttagta-ggtttaccagcaaagaagaggagaattagatcaattgcctatg 22621794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 729233 - 729136
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| | ||||||||| |||||| ||| |||| ||||||||||||||||||| |||||   |||||||  ||||||||||||| | |||| |||||    
T  729233 tgatgaaaggtcatcttacgttattcttagcatgcttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgtctatg 729136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 21450864 - 21450783
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtatt 224  Q
    |||||||| ||||||||| ||||| |||| ||||||| |||||||||||||||| |||||   |||||||  ||||||||||    
T  21450864 tgatgacaggtcatcttaagttatctttagcatgtttctcagtcattttcagtaggttttagcagcaaaaaggaggagtatt 21450783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 26647357 - 26647446
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaat 232  Q
    |||||||| ||||||||| |||||| ||| ||| |||||||||| ||||||||| ||||| | | |||||  ||||||||||||| ||||    
T  26647357 tgatgacaggtcatcttacgttattcttagcatatttttcagtctttttcagtaggttttaccaacaaaacggaggagtattagagcaat 26647446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 28009839 - 28009747
Alignment:
Q  147 gacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    ||||||||||||||  ||||| ||| ||||||||||||||||||||  || |||||   |||||||  |||||| |||||| |||||||||||    
T  28009839 gacatgtcatcttacattattcttagcatgtttttcagtcattttcgctaagttttagcagcaaaaaggaggagcattagagcaattgcctat 28009747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 234
Target Start/End: Complemental strand, 33192450 - 33192358
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattg 234  Q
    ||||||||| ||||||||| | |||| ||| ||||||||||||||| |||||||| ||||| | ||||||  |||  |||||||||| |||||    
T  33192450 ttgatgacaagtcatcttacgctattcttagcatgtttttcagtcaatttcagtaggttttaccagcaaagcagaaaagtattagattaattg 33192358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 17543113 - 17543207
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatg--tttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgc 235  Q
    |||| ||||||||||||| |||||||||| ||||  ||||| ||||||||||| || |||||   |||| |||| |||||||||| |||||||||    
T  17543113 tgataacatgtcatcttacgttatttttagcatgtcttttttagtcattttcaataggttttaatagcataatataggagtattaaatcaattgc 17543207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 20033118 - 20033214
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaa-aatagaggagtattagatcaattgcctatg 240  Q
    ||||||||||| |||||| |||||||||| ||| |||||||  ||||||||||  |||||  || ||| ||||||||||||||||| ||||| ||||||    
T  20033118 tgatgacatgttatcttacgttatttttagcatatttttcaaccattttcagttagtttt--aatcaagaatagaggagtattagaacaattacctatg 20033214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 26652672 - 26652613
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttt 201  Q
    |||||||||||||||| || |||||||||| ||||||||||||| ||||| |||| ||||    
T  26652672 ttgatgacatgtcatcctacgttatttttagcatgtttttcagttatttttagtaggttt 26652613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 35133981 - 35133886
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgccta 238  Q
    |||||||| ||||||||| ||||| | || |||||||||||||| |||| |||| ||||| | | |||||| ||||||||||| |  |||||||||    
T  35133981 tgatgacaggtcatcttacgttatctgtagcatgtttttcagtcttttttagtaggttttaccaacaaaatggaggagtattaaagtaattgccta 35133886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 16114885 - 16114807
Alignment:
Q  155 atcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaatt 233  Q
    |||||| |||||| ||| ||||||||||| |||||||||| ||||||| | |||| || ||| |||||||||| |||||    
T  16114885 atcttacgttattcttagcatgtttttcaatcattttcagcatgttttaccagcataacagatgagtattagagcaatt 16114807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 27973401 - 27973319
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtatt 224  Q
    ||||||||  || |||||| |||||| ||| |||||||||||||||||||||||| |||||   |||||||  ||||||||||    
T  27973401 ttgatgaccagttatcttacgttattcttagcatgtttttcagtcattttcagtaggttttaacagcaaaaaggaggagtatt 27973319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 18098248 - 18098345
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| || |||||| ||||||||||   ||||||||| ||   || |||| ||||| | ||||||  |||||||||||||||||||||||||||    
T  18098248 tgatgacaggttatcttacgttatttttagactgtttttcaatctaatttagtaggttttaccagcaaaccagaggagtattagatcaattgcctatg 18098345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 21848711 - 21848626
Alignment:
Q  155 atcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||||||| ||| |||||||||||||| |||| | || || ||   ||||||| |||||||||||||| ||||||| ||||    
T  21848711 atcttatgttattcttagcatgtttttcagtcgtttttaataggtgttattagcaaaacagaggagtattagagcaattgcttatg 21848626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 12011205 - 12011281
Alignment:
Q  164 tatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| |||||||||||  ||||||||||| ||||| | |||||||   | |||||||||| ||||||||||||    
T  12011205 tatttttagcatgtttttcacacattttcagtaggttttaccagcaaaacgaatgagtattagagcaattgcctatg 12011281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 12210362 - 12210278
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    |||||| | |||||||||  ||||| ||| ||||||||||||||| |||||||| |||||   |||||||  |||||||||||||    
T  12210362 tgatgataggtcatcttacattattcttagcatgtttttcagtcaatttcagtaggttttagcagcaaaaaggaggagtattaga 12210278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 15526805 - 15526848
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagt 185  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||    
T  15526805 ttgatgacatgtcatcttacgttattcttatcatgtttttcagt 15526848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 27116223 - 27116282
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    |||||| ||||||||||| ||| || ||||||||||||||| ||||||| |||| |||||    
T  27116223 tgatgaaatgtcatcttacgtttttcttaacatgtttttcaatcatttttagtaggtttt 27116282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 191
Target Start/End: Original strand, 15630931 - 15630981
Alignment:
Q  141 tttgatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    |||||||||| || ||||||||||||| ||| ||||||||| |||||||||    
T  15630931 tttgatgacaggttatcttatgttattcttagcatgttttttagtcatttt 15630981  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 16817108 - 16817150
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagt 185  Q
    |||||||| ||||||||| |||||| |||||||||||||||||    
T  16817108 tgatgacaagtcatcttacgttattcttaacatgtttttcagt 16817150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 21333070 - 21333108
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttt 180  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  21333070 ttgatgacatgtcatcttatgttattcttaatatgtttt 21333108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 22665883 - 22665786
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||| ||||||  |||||| ||| |||||||||||||   ||| |||||||||| | ||||||  || |||||| ||||  |||||||||||    
T  22665883 tgatgacatgacatcttccgttattcttagcatgtttttcagtttattttagtatgttttactagcaaaccagcggagtactagagaaattgcctatg 22665786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 24283100 - 24283003
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttc-agtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    ||||||||| |||||||| |||||| |||||||||||||  ||  | ||| | || ||||| | ||||||  |||||||||||||||||||| |||||    
T  24283100 tgatgacatatcatcttacgttattcttaacatgtttttttagctaattttaataagttttaccagcaaagcagaggagtattagatcaatttcctat 24283003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 25959459 - 25959556
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| |||||||||  ||||| |||  |||||| |||||| ||||||||| ||||| |  |||||| | | |||||||||||||| | ||||||    
T  25959459 tgatgacaagtcatcttacattattcttaggatgtttctcagtctttttcagtaggttttaccggcaaaacatatgagtattagatcaactacctatg 25959556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 9782979 - 9783075
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    ||||||||  |||||||| |||||| ||| ||||||||||| ||  ||| |||| ||||| |  |||||  |||| ||||||||| |||||||||||    
T  9782979 tgatgacagatcatcttacgttattattagcatgtttttcaatctattttagtaggttttacctgcaaaccagagaagtattagagcaattgcctat 9783075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 14782628 - 14782568
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    ||||||||| ||||||||| |||||| ||| ||||||||||| ||| ||||| || |||||    
T  14782628 ttgatgacaggtcatcttacgttattcttagcatgtttttcactcaatttcaataggtttt 14782568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 17365868 - 17365784
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    |||||||| ||||||| | |||||| ||   || ||||| |||||||||||||| ||||| ||  |||||||||| |||||||||    
T  17365868 tgatgacaagtcatctcacgttattcttggaatattttttagtcattttcagtaggtttttcatccaaaatagagaagtattaga 17365784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 18827493 - 18827445
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    |||||||  ||||||||| |||||| ||||||||||||||||| |||||    
T  18827493 tgatgactggtcatcttacgttattcttaacatgtttttcagttatttt 18827445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 34105015 - 34104967
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    |||||||| ||||||||| ||||||||||| || ||||||| |||||||    
T  34105015 tgatgacaagtcatcttacgttatttttaatatatttttcaatcatttt 34104967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 17335355 - 17335452
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||| |||||| ||  |||||||||||||||||||||||| |||||  ||||||||  ||||||||||||| | ||||||||||    
T  17335355 tgatgacatgtcatcttacgttattcttggcatgtttttcagtcattttcagtaagttttagaagcaaaaaggaggagtattagaacgattgcctatg 17335452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 9849707 - 9849804
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| |||||| |||  |||||||||||||||||| |||| ||||| | | ||||| | |||||||||||||||||||||||||    
T  9849707 tgatgacaggtcatcttacgttattcttagtatgtttttcagtcatttttagtaggttttaccaacaaaacaaaggagtattagatcaattgcctatg 9849804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 17434531 - 17434434
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| |||||||||| ||||||||| |||||||||||||| |||||    ||  ||||||||||||||||||||||||| ||||    
T  17434531 tgatgacaggtcatcttacgttatttttagcatgtttttaagtcattttcagtaggttttaattgcggaatagaggagtattagatcaattgcttatg 17434434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 12836072 - 12836160
Alignment:
Q  145 atgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaatt 233  Q
    ||||||| |||||||| |||||| ||| ||||||||||||||||||| ||||| |||| |||| |||||| |||||||||||| |||||    
T  12836072 atgacatttcatcttacgttattcttagcatgtttttcagtcatttttagtatattttacaaggaaaataaaggagtattagaacaatt 12836160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 18750922 - 18750824
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||||  ||||||||| ||| ||||||||| |||||||||| | |||   |||||||  ||||||||||||| ||||||||||||    
T  18750922 ttgatgacatgtcatcttacattatttttagcatatttttcagttattttcagtagggtttagcagcaaaaaggaggagtattagagcaattgcctatg 18750824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 12246565 - 12246662
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| |||||||||||||||||||||||||||||||  ||||||||| || ||||| ||  || |||| |||||||||| | ||||||| ||||    
T  12246565 tgatgacaggtcatcttatgttatttttaacatgtttttcgctcattttcaataggtttttcatccagaataaaggagtattaaaacaattgcttatg 12246662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 12616811 - 12616714
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||| || ||| |||||||||||||||||| ||||||||| |||||   |||||||  || |||||||||| ||||| ||||||    
T  12616811 tgatgacatgtcatcttacgtaattcttaacatgtttttcagtctttttcagtaggttttagcagcaaaaaggatgagtattagaacaatttcctatg 12616714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 25025203 - 25025106
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| |||||| ||| ||||||||||||||||||| |||| ||||| | ||||||| | ||||| |||||  ||||||||||||    
T  25025203 tgatgacaggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacaaaggagcattagtgcaattgcctatg 25025106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 1832054 - 1832146
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgc 235  Q
    ||||||||||||||||||||||||| |   |||||||||||||||| || |||| ||||| ||  || ||||||||||||||||| |||||||    
T  1832054 tgatgacatgtcatcttatgttattctaggcatgtttttcagtcatattaagtaggttttacatccagaatagaggagtattagagcaattgc 1832146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 9054090 - 9054011
Alignment:
Q  155 atcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattg 234  Q
    |||||| |||| | ||| |||||||| ||||||||||||||| ||||| |||||| |||||| |||||||||||||||||    
T  9054090 atcttacgttaatcttagcatgttttgcagtcattttcagtaggttttacaagcagaatagatgagtattagatcaattg 9054011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 11512037 - 11512123
Alignment:
Q  154 catcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||| ||| ||||||||||||||| || ||||| ||||| ||||||||| | ||||||||||||  ||||| |||||    
T  11512037 catcttatgttattcttatcatgtttttcagtcaattgcagtaggttttacaagcaaaacaaaggagtattagaataattgtctatg 11512123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 15166565 - 15166471
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcct 237  Q
    |||||||| |||||||||  ||||| ||| |||||||||||||||||||||||| |||||   |||||||  ||||||||||||| | |||||||    
T  15166565 tgatgacaggtcatcttacattattcttagcatgtttttcagtcattttcagtaggttttagcagcaaaaacgaggagtattagaacgattgcct 15166471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 14573546 - 14573450
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    |||||||||| |||||||| |||||| ||| ||| ||||| ||||||||| |||| ||||| | ||||||| |||||||||||||| |||||| ||||    
T  14573546 ttgatgacatatcatcttacgttattcttagcatattttt-agtcattttaagtaggttttactagcaaaacagaggagtattagagcaattgtctat 14573450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 17277942 - 17277845
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||| |||||| ||| ||||||||||||||  ||| |||| ||||| | ||||||  | | | |||||||||||||||||||||    
T  17277942 tgatgacatgtcatcttacgttattcttagcatgtttttcagtctattttagtaagttttaccagcaaagcaaatgggtattagatcaattgcctatg 17277845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 23083786 - 23083706
Alignment:
Q  154 catcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattg 234  Q
    |||||||||||||  ||| ||||||||||||  ||||||| ||||||||  ||||| ||||||||||||||||| ||||||    
T  23083786 catcttatgttatacttagcatgtttttcagctattttcaatatgttttaaaagcagaatagaggagtattagagcaattg 23083706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 8968072 - 8968130
Alignment:
Q  144 gatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||||| |||| |||||    
T  8968072 gatgacatgtcatcttacgttattcttagcatgtttttcagtcattttaagtaggtttt 8968130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 8928312 - 8928361
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  8928312 ttgatgacatgtcatcttacgttatttttagcatatttttcagtcatttt 8928361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 17218625 - 17218529
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| | ||||||||| |||||| ||| |||||||||||||||  ||||||| |||||  ||||||||  ||||||||||||| | ||||||||||    
T  17218625 tgatgataggtcatcttacgttattcttagcatgtttttcagtca-attcagtaagttttcgaagcaaaaaggaggagtattagaacgattgcctatg 17218529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 4611510 - 4611603
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcag-tatgttttgcaagcaaa-atagaggagtattagatcaattgcc 236  Q
    |||||||| ||||||||| |||||||| ||||| ||||||||||||||| || |||||||||  | |||| |||||||||| ||||| ||||||||    
T  4611510 tgatgacaggtcatcttacgttattttcaacatatttttcagtcatttttagttatgttttg--atcaaacatagaggagttttagaacaattgcc 4611603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 7583876 - 7583792
Alignment:
Q  156 tcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| |||||| ||| ||| ||||||| |||||||||||| |||||   |||||||  ||||||||||||| ||||||||||||    
T  7583876 tcttacgttattcttagcatctttttcaatcattttcagtaggttttagcagcaaaaaggaggagtattagaacaattgcctatg 7583792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 9536756 - 9536852
Alignment:
Q  144 gatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||| ||| |||||||||||| ||| ||||||||||| | |||||||||| |||||   |||||||  ||||||||||| | ||||| ||||||    
T  9536756 gatgacaggtcctcttatgttattcttagcatgtttttcaattattttcagtaggttttagcagcaaaaaggaggagtattacaacaattacctatg 9536852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 26047144 - 26047193
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    ||||||||||||||||||| |||||||| |||||  ||||||||||||||    
T  26047144 ttgatgacatgtcatcttacgttattttcaacatacttttcagtcatttt 26047193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 26052325 - 26052374
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    ||||||||||||||||||| |||||||| |||||  ||||||||||||||    
T  26052325 ttgatgacatgtcatcttacgttattttcaacatacttttcagtcatttt 26052374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 21166483 - 21166531
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    ||||||||||||||||||| ||||||| ||||| ||||||| |||||||    
T  21166483 tgatgacatgtcatcttatattattttcaacatatttttcaatcatttt 21166531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 10236652 - 10236589
Alignment:
Q  177 tttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||||| |||||||| ||||| | ||||||  ||| ||||||| |||||||||||||||    
T  10236652 tttttcagtcaatttcagtaggttttaccagcaaagaagaagagtatttgatcaattgcctatg 10236589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 11782589 - 11782530
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    |||||| | ||||||||| |||||| ||||||||||||| ||||||||| |||| |||||    
T  11782589 tgatgataggtcatcttacgttattcttaacatgttttttagtcattttaagtaggtttt 11782530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 12289161 - 12289208
Alignment:
Q  144 gatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    ||||||||||||| |||  ||||||||||||| |||||||||||||||    
T  12289161 gatgacatgtcatattacattatttttaacatatttttcagtcatttt 12289208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 13208483 - 13208530
Alignment:
Q  144 gatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    ||||||||||||||||| |||||||| |||||| ||||||| ||||||    
T  13208483 gatgacatgtcatcttacgttattttaaacatgcttttcagacatttt 13208530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Original strand, 11252129 - 11252171
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagt 185  Q
    |||||||| ||||||||| |||||||||| |||||||||||||    
T  11252129 tgatgacaggtcatcttacgttatttttagcatgtttttcagt 11252171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 25982217 - 25982263
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcatt 189  Q
    ||||||||||| ||||||  ||||||| |||||||||||||||||||    
T  25982217 tgatgacatgttatcttacattattttcaacatgtttttcagtcatt 25982263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 9263349 - 9263446
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    ||||||| | || |||||| |||||||||| |||||||||||||||  |||| || |||||   |||| ||  ||||||||||||| |||||| ||||    
T  9263349 ttgatgataggttatcttacgttatttttagcatgtttttcagtcaaattcaataggttttatcagcagaactgaggagtattagaacaattgtctat 9263446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 13588805 - 13588752
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagta 196  Q
    ||||||||  |||||||| |||||| ||| ||||||||||| ||||||||||||    
T  13588805 tgatgacaaatcatcttacgttattattagcatgtttttcaatcattttcagta 13588752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 25096394 - 25096341
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagta 196  Q
    |||||||||||||||||| ||| || ||| |||||||| |||| ||||||||||    
T  25096394 tgatgacatgtcatcttacgttgttcttagcatgttttacagtaattttcagta 25096341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 17711383 - 17711307
Alignment:
Q  163 ttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    ||||| ||| ||||||||| |||||||||||||| |||||    ||||||  ||||||||||||| | |||||||||    
T  17711383 ttattcttagcatgttttttagtcattttcagtaggttttagctgcaaaaatgaggagtattagaacgattgcctat 17711307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 20828152 - 20828236
Alignment:
Q  156 tcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| |||||| ||| ||| |||||||||| |||||| || || ||   ||||||||| |||||||||| | ||||||||||||    
T  20828152 tcttacgttattcttagcatctttttcagtctttttcaataggtattagcagcaaaataaaggagtattacaacaattgcctatg 20828236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 22350240 - 22350336
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    ||||||||  ||||||||  ||||| ||| |||||||||||||   ||| |||| ||||| | ||||||  ||| ||||||||||||||||| ||||    
T  22350240 tgatgacaaatcatcttacattattcttagcatgtttttcagtttattttagtaggttttaccagcaaaccagaagagtattagatcaattgtctat 22350336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 4874 - 4964
Alignment:
Q  145 atgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgc 235  Q
    |||||| ||||||||| |||||| ||| ||||||||||||||| ||| |||| ||||| | |||||| |||||||||||||||||||||||    
T  4874 atgacaagtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaagtagaggagtattagatcaattgc 4964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 13472 - 13564
Alignment:
Q  141 tttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaatt 233  Q
    |||||| ||| |||||||||   |||| ||| ||||||||||| ||| ||| |||| ||||| | | |||| ||||||| |||||||||||||    
T  13472 tttgattacaagtcatcttacaatattcttagcatgtttttcaatcaattttagtaggttttaccaacaaagtagaggaatattagatcaatt 13564  T

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Target: scaffold0043 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 88436 - 88533
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||| |||||| ||| ||||||||||| |||||||||||| ||||| | |  ||||||||||||| ||||| |||||| |||||    
T  88436 tgatgacatgtcatcttacgttattcttagcatgtttttcaatcattttcagtaggttttaccaaaaaaatagaggagtcttagagcaattgtctatg 88533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 41435 - 41339
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||  |||||||| |||||| ||| ||||||||||||| ||||| |||| ||||| | ||||||| |||||||||||||||||||||||||||    
T  41435 tgatgacagctcatctta-gttattcttagcatgtttttcagttatttttagtaggttttaccagcaaaacagaggagtattagatcaattgcctatg 41339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 22564558 - 22564643
Alignment:
Q  152 gtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcct 237  Q
    ||||||||| |||||| ||| ||||||||||||||||||| |||| ||||| | ||||||| |||||||||||||| |||||||||    
T  22564558 gtcatcttacgttattcttagcatgtttttcagtcatttttagtaggttttaccagcaaaacagaggagtattagagcaattgcct 22564643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 21687128 - 21687220
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattg 234  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||| ||| |||| ||||| | ||||||| ||| ||||| |||||||||||    
T  21687128 ttgatgacatgtcatcttacgttattcttagcatgtttttcagtcaattttagtaggttttaccagcaaaacagaagagtaatagatcaattg 21687220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 240
Target Start/End: Complemental strand, 24469894 - 24469798
Alignment:
Q  144 gatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||| ||||||||| ||||||||||  |||||||||| |||||||||||| ||||||  |||||||  ||||||||||||| | ||||||||||    
T  24469894 gatgacaggtcatcttacgttatttttagtatgtttttcaatcattttcagtaggttttgacagcaaaaaggaggagtattagaacgattgcctatg 24469798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 21060422 - 21060501
Alignment:
Q  161 tgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| || ||||||||||||||||||||| || |||||  || |||||||||||||||||||||||||||| ||||    
T  21060422 tgttatttctagcatgtttttcagtcattttcaataggttttaaaaccaaaatagaggagtattagatcaattgcatatg 21060501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 19721846 - 19721942
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||| |||  ||||| |||| |||||||| ||||| |||||||| ||||| |||||| ||||||||||||||||||||||||| ||||    
T  19721846 tgatgacaggtcatattaaattattcttaaaatgttttt-agtcaatttcagtaggttttacaagcagaatagaggagtattagatcaattgcttatg 19721942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 27961304 - 27961229
Alignment:
Q  150 atgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtatta 225  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||||| |||||  |  ||||||||||||||||||    
T  27961304 atgtcatcttacgttattcttaacatgtttttcaatcattttcagtaggtttttaatccaaaatagaggagtatta 27961229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 9848260 - 9848163
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||| | | |||||| ||||||||||||||||||||||| |||| |||||   |||||||  || |||||||||| ||||| ||||||    
T  9848260 tgatgacatgtcatttgacgttattcttaacatgtttttcagtcatttttagtaggttttattagcaaaaaggatgagtattagagcaatttcctatg 9848163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 14641729 - 14641632
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| || |||||| |||||| ||| ||||||||||||| |||||||||| |||||   |||||||  ||||||||||||| ||||| ||||||    
T  14641729 tgatgacaggttatcttacgttattcttagcatgtttttcagttattttcagtaggttttagcagcaaaaaggaggagtattagaacaattacctatg 14641632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 23644318 - 23644414
Alignment:
Q  144 gatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||| || |||||| |||||| ||| ||||||||||| |  |||| |||| ||||| | ||||||| | |||||||||||||||||||||||||    
T  23644318 gatgacaggttatcttacgttattcttagcatgtttttcaattgtttttagtaggttttaccagcaaaacataggagtattagatcaattgcctatg 23644414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 32760060 - 32759969
Alignment:
Q  146 tgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||||||||| |||   |||| |||||||||||||||||||||||| ||||| ||  |||||||||||| || |||| ||||||| ||||    
T  32760060 tgacatgtcatcttacgtt---tttagcatgtttttcagtcattttcagtaggttttccatccaaaatagaggactactagagcaattgcttatg 32759969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 21079739 - 21079818
Alignment:
Q  161 tgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| || |||||||||||  |||||| |||| |||||  || |||||||||||||||||||||||||||| ||||    
T  21079739 tgttatttctagcatgtttttcaaccatttttagtaggttttaaaaccaaaatagaggagtattagatcaattgcatatg 21079818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 9519829 - 9519732
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagta-tgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||  |||||||| |||||||||| ||||||||| ||| |||||||||| | ||| ||| ||||||  ||||||||||||| ||||||||||||    
T  9519829 tgatgacaattcatcttacgttatttttagcatgttttttagttattttcagtagtatttagca-gcaaaaaggaggagtattagagcaattgcctatg 9519732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 14076494 - 14076396
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| ||||||||| |||||| ||| |||| |||||||| |||||||||||| |||   ||||||   |||||||||||||  |||||||||||    
T  14076494 ttgatgacaggtcatcttacgttattcttagcatggttttcagttattttcagtatgatttagcagcaaagaggaggagtattagagaaattgcctatg 14076396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 19246373 - 19246276
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||| | |||||| | | ||||||||||||||  ||| |||| |||||   ||||||||||| |||||||||||||||||| ||||    
T  19246373 tgatgacaggtcatctaacgttattctaagcatgtttttcagtctattttagtaggttttaacagcaaaatagatgagtattagatcaattgcttatg 19246276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 22845862 - 22845947
Alignment:
Q  154 catcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    ||||||| |||| | ||| ||||||||||||| ||||||||||||||||   | |||||  ||||||||||||| |||||||||||    
T  22845862 catcttacgttactcttagcatgtttttcagttattttcagtatgttttaacaacaaaaaggaggagtattagaacaattgcctat 22845947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 9338977 - 9339028
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttca 193  Q
    ||||| ||||||||||||| || ||| |||||||||||||||||||||||||    
T  9338977 ttgataacatgtcatcttacgtcattcttaacatgtttttcagtcattttca 9339028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 14727231 - 14727172
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    |||||||| ||||||||| |||||| ||| ||||||||||||||||||| |||| |||||    
T  14727231 tgatgacaggtcatcttacgttattattaccatgtttttcagtcatttttagtaggtttt 14727172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 22404253 - 22404336
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtatta 225  Q
    ||||||||||||||||||  |||||| ||| ||||||||||||| | |||||||| |||||   |||||||  |||||||||||    
T  22404253 ttgatgacatgtcatctttcgttattcttatcatgtttttcagtaaatttcagtaggttttagcagcaaaaaggaggagtatta 22404336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 8246706 - 8246613
Alignment:
Q  146 tgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| |||| ||||||||||| ||| ||| ||||||||||||||| |||| ||||| | |  |||| | ||||||||||||||||||| |||||    
T  8246706 tgacaagtcaccttatgttattcttagcat-tttttcagtcatttttagtaggttttaccataaaaacataggagtattagatcaattgtctatg 8246613  T

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Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 9841106 - 9841032
Alignment:
Q  153 tcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    |||||||| |||||| ||||||||| ||| |||||||||||||| ||||| | |||| ||  |||||||||||||    
T  9841106 tcatcttacgttattcttaacatgtgttttagtcattttcagtaggttttaccagcagaaaggaggagtattaga 9841032  T

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Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 9897868 - 9897957
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaatt 233  Q
    |||||||||||||||||| ||  || ||| |||| |||| |||||||||||||| ||||| | | ||||| |||||||| |||||||||||    
T  9897868 tgatgacatgtcatcttacgtcgttcttagcatgatttttagtcattttcagta-gttttaccaacaaaacagaggagtgttagatcaatt 9897957  T

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Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 29230152 - 29230198
Alignment:
Q  145 atgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||    
T  29230152 atgacatgtcatcttacgttattttcaacatatttttcagtcatttt 29230198  T

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Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 24480121 - 24480040
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtatt 224  Q
    |||||| | ||||||||| |||||| ||| ||||| ||||| |||||||||||| ||||||  |||||||  ||||||||||    
T  24480121 tgatgataggtcatcttacgttattcttagcatgtatttcaatcattttcagtaggttttggcagcaaaaaggaggagtatt 24480040  T

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Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 9507295 - 9507367
Alignment:
Q  168 tttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| |||||||||||||||||||| ||||| | || | || || ||||||||||| ||||||| ||||    
T  9507295 tttaacatatttttcagtcattttcagtaggttttaccagtagaacaggggagtattagaacaattgcttatg 9507367  T

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Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 227
Target Start/End: Original strand, 13216314 - 13216389
Alignment:
Q  153 tcatcttatgttatttttaacatgtttt-tcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    |||||||| |||||| ||| |||||||| ||||||||||| | || ||||||| | |||| |||||||||||||||    
T  13216314 tcatcttacgttattcttagcatgttttttcagtcatttttaataggttttgccatcaaagtagaggagtattaga 13216389  T

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Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 17822022 - 17822121
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttc-agtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||| |||||||||||||| |||||| ||| |||||||||| ||| ||||||| || | |||   |||||||  ||||||||||||| | ||||||||||    
T  17822022 ttgaagacatgtcatcttacgttattcttagcatgtttttctagttattttcaataggatttagcagcaaaaaggaggagtattagaacgattgcctatg 17822121  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 4340762 - 4340664
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||  |||||||| ||||||||||  |||||||||||  |||||||||| |||||   || ||||  ||||||||||| | ||||| ||||||    
T  4340762 ttgatgacagatcatcttacgttatttttagtatgtttttcagatattttcagtaggttttagcagtaaaaaggaggagtattaaagcaatttcctatg 4340664  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 240
Target Start/End: Original strand, 19593975 - 19594073
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttc-agtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||| |||||||||| | ||| |||||||||  ||| |||||||||| |||||    ||||||  ||||||||||||| ||||||||||||    
T  19593975 tgatgacaagtcgtcttatgttaatcttagcatgtttttttagttattttcagtaggttttagctgcaaaaaggaggagtattagaacaattgcctatg 19594073  T

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Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 240
Target Start/End: Complemental strand, 20080770 - 20080736
Alignment:
Q  206 agcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||| |||||||||||||||||||||||||||    
T  20080770 agcaaaacagaggagtattagatcaattgcctatg 20080736  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 30356360 - 30356263
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||| ||  |||||| ||||||||||||| ||||||||||| || ||||| ||   | |||||||||||  |||| ||||||| ||||    
T  30356360 tgatgacaggtcattttgcgttattcttaacatgttttttagtcattttcattaggttttacatcaagaatagaggagtgatagagcaattgcttatg 30356263  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 2588384 - 2588296
Alignment:
Q  152 gtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| ||| |||||| ||| ||||||||||||||||| |  ||||| | | || || ||| |||||||||| |||||| |||||    
T  2588384 gtcatcttacgttgtttttagcatatttttcagtcattttcaattggttttaccaacataaaagatgagtattagaacaattgtctatg 2588296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 6628971 - 6629067
Alignment:
Q  140 atttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcc 236  Q
    |||||||| ||| |||||||| |||||| ||| ||||| ||| || |  ||| |||| ||||| | ||||||  |||| ||||||||||||||||||    
T  6628971 atttgatgccatatcatcttacgttattcttagcatgtcttttagactattttagtaggttttaccagcaaaccagagtagtattagatcaattgcc 6629067  T

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Target: scaffold0451 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 10103 - 10190
Alignment:
Q  153 tcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| | |||| ||| |||| ||||||||||||||||||| ||||| | ||||||| ||||||||||||||||||||| |||||    
T  10103 tcatcttacgctattattagcatgcttttcagtcattttcagtaggttttactagcaaaacagaggagtattagatcaattgtctatg 10190  T

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Target: scaffold0451; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 5827 - 5730
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| | ||||||||  |||||||||||||||||||||||| ||||| |||| | |||  ||||||||  ||||||||||||| |||||| |||||    
T  5827 tgatgaaaggtcatctttcgttatttttaacatgtttttcagttatttttagtaggatttagaagcaaaaaggaggagtattagaacaattgtctatg 5730  T

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Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 240
Target Start/End: Complemental strand, 26069348 - 26069249
Alignment:
Q  141 tttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||| || |||||| |||||| ||||||||||||| ||||||||||||||  |||| | |||| || |||||||||||||| ||||||| ||||    
T  26069348 tttgatgacaagttatcttacgttattcttaacatgttttttagtcattttcagtagattttaccagcagaacagaggagtattagaacaattgcttatg 26069249  T

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Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 17469569 - 17469655
Alignment:
Q  154 catcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||| |||||| ||| ||||||||||| |||||||||| | ||||| | ||||||| |||||||||||||| ||||||||||||    
T  17469569 catcttacgttattcttagcatgtttttcaatcattttcagcaggttttaccagcaaaacagaggagtattagagcaattgcctatg 17469655  T

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Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 26253590 - 26253492
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| ||||||||| |||||||||| ||||||||||||||| |||||||||| | ||||| ||  || ||||||||||||||| | ||||||| ||||    
T  26253590 ttgataacatgtcattttatgttattcttaacatgtttttcaatcattttcagcaagttttacatccacaatagaggagtattaaagcaattgcttatg 26253492  T

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Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 34488954 - 34488861
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcc 236  Q
    ||||| || ||||||||| |||||| ||| ||||||||||||||||||| |||| | ||| | ||||||| ||| |||||||||||||||||||    
T  34488954 tgatggcaggtcatcttacgttattcttagcatgtttttcagtcatttttagtaggatttaccagcaaaacagatgagtattagatcaattgcc 34488861  T

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Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 23387546 - 23387644
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||| | ||| ||||||||||||  || |||||||||||||||||||||||| |||||   |||||||  ||||||||||||| | ||||||||||    
T  23387546 ttgatgataggtcgtcttatgttattcgtagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatg 23387644  T

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Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 18832310 - 18832222
Alignment:
Q  152 gtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||  ||||||||| |||||||||||||| |||||| || ||||| | | ||||| |||||||||||||| |||||| |||||    
T  18832310 gtcatcttacattatttttagcatgtttttcagtctttttcaataggttttaccaacaaaacagaggagtattagagcaattgtctatg 18832222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 19053198 - 19053102
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    |||||||||||||| ||| |||||| ||| ||||||| ||||| ||||||||||  ||||   |||||||  ||||||||||||| |||||||||||    
T  19053198 tgatgacatgtcattttacgttattcttagcatgtttatcagttattttcagtagatttttacagcaaaaaggaggagtattagaacaattgcctat 19053102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 23110196 - 23110280
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    ||||||| |||||||||| |||||| ||||||||||||| ||||||| || ||| |||||   ||||||| ||||||||||||||    
T  23110196 tgatgacgtgtcatcttacgttattcttaacatgttttttagtcattatcggtaggttttaacagcaaaacagaggagtattaga 23110280  T

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Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 233
Target Start/End: Original strand, 19761580 - 19761671
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaatt 233  Q
    ||||||||| ||||||||| |||||| ||| |||||| ||||||||||||||||| ||||  || | |||||| |||| |||||||| ||||    
T  19761580 ttgatgacaggtcatcttacgttattattagcatgttattcagtcattttcagtaggtttaacaggaaaaataaaggattattagattaatt 19761671  T

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Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 196
Target Start/End: Complemental strand, 29988056 - 29988001
Alignment:
Q  141 tttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagta 196  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||| ||||    
T  29988056 tttgatgacaggtcatcttacgttatttttagcatgtttttcagtcatttttagta 29988001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 240
Target Start/End: Original strand, 19003764 - 19003862
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||| |||||| |||||| ||  ||||||||||||| |||||||||| |||||   |||||||  || |||||||||| |||||| |||||    
T  19003764 ttgatgacatgtgatcttacgttattcttggcatgtttttcagttattttcagtaggttttagcagcaaaaaggatgagtattagaacaattgtctatg 19003862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 24162014 - 24162108
Alignment:
Q  146 tgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| ||||| ||| |||||| ||| ||||||||||||||||||||| ||  |||| | |||||||| ||| |||||||||  |||||||||||    
T  24162014 tgacaggtcattttacgttattcttagcatgtttttcagtcattttcaatagattttaccagcaaaatggagaagtattagaataattgcctatg 24162108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 26122480 - 26122382
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| || ||||||  ||||| ||| ||||||||| |||| |||| |||| ||||| | ||||||| |||||||||||||| |||||| |||||    
T  26122480 ttgatgacaggttatcttaaattattcttagcatgttttttagtcgtttttagtaggttttaccagcaaaacagaggagtattagagcaattgtctatg 26122382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 17831790 - 17831695
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||||||||||||| |||||| ||| |||||||||||| ||||||||||  ||||| ||  || |||| |||||||| |||| |||||||||||    
T  17831790 tgatgacatgtcatcttacgttattcttagcatgtttttcag-cattttcagttagtttttcatccataatataggagtataagat-aattgcctatg 17831695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 18939617 - 18939520
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| |||||| |||||||||||||||||| | || |||| ||||| | ||||||| | | ||||||||||  |||||| ||||    
T  18939617 tgatgacaggtcatcttacgttattcttaacatgtttttcagtcttattaagtaagttttaccagcaaaacatatgagtattagagtaattgcatatg 18939520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 20860436 - 20860339
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| ||||||||| |||| | ||| ||||||||||| | |||||||||| |||||   |||||||  ||| ||||||||| ||||||||||||    
T  20860436 tgatgacaggtcatcttacgttactgttagcatgtttttcattaattttcagtaggttttagcagcaaaaaggagaagtattagaacaattgcctatg 20860339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 24142504 - 24142462
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagt 185  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  24142504 tgatgacatgtcatcttatgttattcttagcatgtttttcagt 24142462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 28666579 - 28666505
Alignment:
Q  153 tcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||| |||||   |||||||  ||| |||||||||    
T  28666579 tcatcttatgttattcttatcatgtttttcattcattttcagtaggttttagcagcaaaaaggagaagtattaga 28666505  T

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Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 245
Target Start/End: Complemental strand, 29799141 - 29799039
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatgct 242  Q
    ||||||||  ||||||||| ||||| |||  |||||||| ||||||||| | || ||| | | |||||||||||||||||| ||| |||||| ||||| |    
T  29799141 tgatgacacatcatcttatattattcttagtatgttttttagtcatttttaataggttctaccagcaaaatagaggagtataagaacaattgtctatgat 29799042  T
Q  243 tct 245  Q
    |||    
T  29799041 tct 29799039  T

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Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 191
Target Start/End: Original strand, 20102892 - 20102941
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcatttt 191  Q
    ||||||||||| ||||||| |||||||||| ||| |||||||||||||||    
T  20102892 ttgatgacatgccatcttacgttatttttagcatatttttcagtcatttt 20102941  T

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Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 26117534 - 26117437
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||| ||||||||||||  ||||| ||| ||||||||| | |||||||||| | ||||| |||||| || ||| |||| ||||| ||||||| ||||    
T  26117534 tgatggcatgtcatcttacattattcttagcatgttttttaatcattttcagcaggttttacaagcagaagagatgagttttagaacaattgcttatg 26117437  T

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Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 15691361 - 15691306
Alignment:
Q  147 gacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    |||||||||||||| |||||| ||| ||| ||||| |||||||||||||| |||||    
T  15691361 gacatgtcatcttacgttattcttagcatattttttagtcattttcagtaggtttt 15691306  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 22797422 - 22797517
Alignment:
Q  145 atgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||| ||||||||| |||||| ||  ||||||||||||||||||||  || |||||   |||||||  ||| ||||||||| | ||||||||||    
T  22797422 atgacaggtcatcttacgttattattcgcatgtttttcagtcattttcgataggttttattagcaaaaaggagaagtattagagcgattgcctatg 22797517  T

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Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 22845805 - 22845892
Alignment:
Q  153 tcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||||||||| ||| ||||||| | ||| | ||  |||| ||||| | ||||||| | ||| |||||||||||||||||||||    
T  22845805 tcatcttatgttattcttagcatgtttgttagttaattatagtaggttttaccagcaaaacataggtgtattagatcaattgcctatg 22845892  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 23266913 - 23266854
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    |||||||| |||||||||  ||||||||  ||||||||| |||||||||||||| |||||    
T  23266913 tgatgacaggtcatcttacattatttttggcatgttttttagtcattttcagtaggtttt 23266854  T

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Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 202
Target Start/End: Complemental strand, 23338988 - 23338929
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    |||||||| ||||||||| |||||| ||| ||||||||||| ||||||||| || |||||    
T  23338988 tgatgacaggtcatcttaggttattcttagcatgtttttcaatcattttcattaggtttt 23338929  T

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Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 202
Target Start/End: Original strand, 25572478 - 25572537
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    |||||||| |||||| || |||||| ||| ||||||||||||||| |||||||| |||||    
T  25572478 tgatgacaagtcatcctacgttattcttagcatgtttttcagtcaatttcagtaggtttt 25572537  T

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Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 25920918 - 25920831
Alignment:
Q  153 tcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    |||||||| |||||| ||| ||| |||||  ||||||||||||| | ||| | |||||||  || |||||||||| ||||||||||||    
T  25920918 tcatcttacgttattcttagcatatttttttgtcattttcagtaggatttaccagcaaaacggatgagtattagagcaattgcctatg 25920831  T

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Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 21353012 - 21352970
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagt 185  Q
    |||||||| |||||||||||||||| ||| |||||||||||||    
T  21353012 tgatgacaggtcatcttatgttattcttagcatgtttttcagt 21352970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 23214825 - 23214875
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttca 193  Q
    |||||||| ||||||||| |||||| ||| ||||||||||||| |||||||    
T  23214825 tgatgacaggtcatcttacgttattcttagcatgtttttcagttattttca 23214875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 226
Target Start/End: Original strand, 24658298 - 24658383
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaac-atgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattag 226  Q
    ||||||| | ||||||||| ||||||||||||  ||||||||| ||||||| |||| |||||   |||||||  ||||||||||||    
T  24658298 ttgatgaaaggtcatcttacgttatttttaactttgtttttcaatcatttttagtaggttttagcagcaaaaaggaggagtattag 24658383  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 24263759 - 24263847
Alignment:
Q  152 gtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| |||||| ||| ||||||||||||||  ||| |||| ||||| | | ||||  |||||| ||||| ||||||| ||||||    
T  24263759 gtcatcttacgttattcttagcatgtttttcagtctattttagtaggttttaccaacaaatcagaggattattatatcaatttcctatg 24263847  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 25400737 - 25400797
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgtttt 202  Q
    ||||||| | ||||| ||| |||||| ||| ||||||||||||||||||||| || |||||    
T  25400737 ttgatgagaggtcattttacgttattcttagcatgtttttcagtcattttcattaggtttt 25400797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 28254978 - 28254906
Alignment:
Q  153 tcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtatta 225  Q
    |||| ||| |||||| ||||||| ||||||||||||||||||||  |||| ||  ||||| || |||||||||    
T  28254978 tcatgttacgttattcttaacatatttttcagtcattttcagtagttttttcatccaaaaaagtggagtatta 28254906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 24899 - 24815
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattaga 227  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||||||| | || ||||| ||  || |||||||||||||||||    
T  24899 tgataacatgtcatcttatgttattcttagcatgtttttcagtcattttgaataggttttacatccagaatagaggagtattaga 24815  T

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Target: scaffold0019; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 35271 - 35193
Alignment:
Q  147 gacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtatta 225  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||||||| || |||||  |  || |||||||||||||||    
T  35271 gacatgttatcttatgttattcttagcatgtttttcagtcattttcaataggttttatatccataatagaggagtatta 35193  T

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Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 4922 - 4824
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||| | ||| ||||||||||||  || |||||||||||||||||||||||| |||||   |||||||  ||||||||||||| | ||||||||||    
T  4922 ttgatgataggtcgtcttatgttattcgtagcatgtttttcagtcattttcagtaggttttagcagcaaaaaggaggagtattagaacgattgcctatg 4824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 243830 - 243926
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    |||||||||| |||||||| |||||| ||| ||| ||||| ||||||||| |||| ||||| | ||||||| |||||||||||||| |||||| ||||    
T  243830 ttgatgacatatcatcttacgttattcttagcatattttt-agtcattttaagtaggttttactagcaaaacagaggagtattagagcaattgtctat 243926  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 240
Target Start/End: Complemental strand, 192220 - 192122
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| ||||||||| |||||||||| |||| |||||||||||||||| || |||||   ||||||||  |||||| ||||| | ||||| ||||    
T  192220 ttgatgacaggtcatcttacgttatttttagcatggttttcagtcattttcaataggttttagcagcaaaatgaaggagtgttagagcgattgcttatg 192122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 92827 - 92924
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctat 239  Q
    ||||||||| || |||||| |||||| ||| ||||||||||||| ||||| |||| | |||   ||||||| |||||| ||||||| | |||||||||    
T  92827 ttgatgacaagttatcttacgttattcttagcatgtttttcagttatttttagtagggtttagcagcaaaaaagaggaatattagagccattgcctat 92924  T

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Target: scaffold0115 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 36130 - 36222
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattg 234  Q
    |||||| ||| | |||||| |||||| ||| ||||||||||||||||||||| || |||||   ||||||  | || ||||||||||||||||    
T  36130 ttgatggcatattatcttacgttattcttatcatgtttttcagtcattttcaataggttttatcagcaaagcatagtagtattagatcaattg 36222  T

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Target: scaffold0555 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 6551 - 6500
Alignment:
Q  142 ttgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttca 193  Q
    |||||||||||| |||||| |||||| ||| ||||||||||||| |||||||    
T  6551 ttgatgacatgttatcttacgttattcttagcatgtttttcagttattttca 6500  T

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Target: scaffold0360 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 16488 - 16558
Alignment:
Q  163 ttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattg 234  Q
    ||||| ||| ||||||||| ||||||||| |||| ||||| |||||| |||||| || ||||||||||||||    
T  16488 ttattcttagcatgttttt-agtcatttttagtaggttttacaagcagaatagatgaatattagatcaattg 16558  T

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Target: scaffold0086 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 12816 - 12883
Alignment:
Q  173 catgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||| ||||||||||| || ||||| ||   | ||||||||||||||||| ||||||||||||    
T  12816 catgttttttagtcattttcaataggtttttcatctagaatagaggagtattagagcaattgcctatg 12883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 12157 - 12107
Alignment:
Q  175 tgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtatta 225  Q
    ||||||||| |||||||||||| ||||| ||| || |||||||||||||||    
T  12157 tgtttttcattcattttcagtaggttttacaaacagaatagaggagtatta 12107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 7483 - 7386
Alignment:
Q  143 tgatgacatgtcatcttatgttatttttaacatgtttttcagtcattttcagtatgttttgcaagcaaaatagaggagtattagatcaattgcctatg 240  Q
    ||||||||||||| ||||  ||||| | | ||||||||||||||||||| |||| |||||  |  || |||| |||||| || || ||||||||||||    
T  7483 tgatgacatgtcaacttacattattgtaagcatgtttttcagtcatttttagtaggttttatatccataataaaggagtttttgagcaattgcctatg 7386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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