View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3843_high_7 (Length: 346)
Name: NF3843_high_7
Description: NF3843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3843_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 18 - 337
Target Start/End: Original strand, 2462463 - 2462782
Alignment:
| Q |
18 |
gttgcaattgtggaacacaatttaaagttatggttcaagttctgaaatatatgtggaactttctgatatttttcttttatatgatttctataggaaaggt |
117 |
Q |
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| T |
2462463 |
gttgcaattgtggaacacaatttaaagttatggttcaagttctgaaatatatgtggaactttctgatatttttcttttatatgatttctataggaaaggt |
2462562 |
T |
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| Q |
118 |
cttctcatcaatctttgatgtatttccttggtactaaagagaaacaagttttcaatcttttggtggtagatgtgtatattttactattaacatgattatt |
217 |
Q |
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| T |
2462563 |
cttctcatcaatctttgatgtatttccttggtactaaagagaaacaagttttcaatcttttggtggtagatgtgtatattttactattaacatgattatt |
2462662 |
T |
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| Q |
218 |
attatacacttttacataccataatggaaaacttgtttgacttgtgtaatgcttcaacaatgtgatcttcctttatgaatttattgtttcattctttttc |
317 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2462663 |
attatacacttttacataccataatggaaaacttgcttgacttgtgtaatgcttcaacaatgtgatcttcctttatgaatttattgtttcattctttttc |
2462762 |
T |
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| Q |
318 |
caactaaatttattgatgat |
337 |
Q |
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|||||||||||||||||||| |
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| T |
2462763 |
caactaaatttattgatgat |
2462782 |
T |
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